Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0001243

Physical Location & Seq

Genomic Coordinates Reverse (-)

27293043 .. 27303318

Gene Structure 10276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG131100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGCAGCGATAACTCGCCTTCACCCTCCTTCTCTCTTCTCCTTGAAATCTTCCTCCTCACTCATAACTCGCTTCCCCTCTTCCCTCTACTCCCCTCGCCCTCTTCGCACGCTCTCCACAACCGCTATCCTCGGCTCCAACGCCCAGGATCAGGTTGAAACTGTGGAAGCGCATGGATCCATAGTTGGGGATCTACTGGACTACCTAAACGAGTCTTGGACTCACTTTCACGCTACGGCTGAAGCTAAACGACAACTAATTGATGCTGGTTTTCATTTGCTGAATGAGAATGATGACTGGGACCTTAAGCCTGGTGGACGCTACTTCTTTACACGAAATATGTCTTGTTTGGTTGCGTTTGCTGTTGGAGAGAAGTATAGTGCTGGAAATGGTTTCCATGTGATTGCTGCTCACACCGACAGTCCCTGTCTAAAATTAAAACCAAGATCTGCATCAACCAAGTCTGGCTGTCTAATGATAAATGTGCAGACCTATGGAGGTGGTTTGTGGCATACTTGGTTTGATAGAGACCTAAGTGTGGCAGGCAGGGTTATTTTGAGAGATGGGAATGGTTCTTTTATCCAGAAGCTTGTCAAAGTGAAGAGACCTCTTTTACGAATACCTACACTTGCCATTCACCTTGACCGCACAGTGAACAAGGATGGATTTAAACCAAATGTAGAGACTCATCTTATTCCATTACTAGCATCAAAACTAGAAGAAACAGCATCTTCAGAGACAAAAGAGAAAAGTGCGACAGCATCTACGAAAGCTGCTCATCATCCATTGCTCATGCAGGCTCTATCAGATGAGATCAATTGTAACGTTGATGACATAGTGAGCATTGAGTTGAATGTCTGTGATACCCAACCGAGCTGCCTTGGAGGTGGAAATAATGAATTTATCTTTTCAGGAAGACTAGATAATCTTGCCTCAAGTTACTGTGCACTGAGAGCTCTTATTGATTCATGTAAATCTCCTGGTGATTTAGCAAGTGAGCATGCTATACGTATGGTTGCTTTATTTGACAATGAAGAGGTGGGTTCAGGATCCATTCAGGGTGCTGGTGCTCCAACTATGTTTCAGGCTATGAGACGCATAATTAGTTGCTTAGCTGAAAAGTATGTTGGTGAATGTTCCTTTGAGCGTGCAGTACGCCAATCATTCCTTGTGTCTGCTGACATGGCTCATGGAGTCCACCCAAATTTTATGGACAAGCATGAGGAATACCATCGACCTGAAATGCAAAAGGGACTTGTTATCAAGCATAATGCAAACCAGCGATATGCTACTAGTGGAGTCACATCTTTTCTTTTCCAAGAAATTGGCAAAATCCACAACCTTCCAACTCAGGAATTTGTGGTGAGAAATGATATGGGATGCGGATCGACAATAGGTCCCATACTAGCTTCAGGGGCGGGCATCCGTACTGTTGATTGTGGAATTGCTCAGCTTTCTATGCACAGGTACCGCAATGGATTGATGCTACACATACTATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0009987 GO:0016787 GO:0019538 GO:0034641 GO:0043170 GO:0043603 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0070006 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M18

Protein Analysis

500

Amino Acids

54.83

Weight (kDa)

7.06

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M18	PF02127	68 - 492	5.6e-147	Aminopeptidase I zinc metalloprotease (M18)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04710
fragaria_vesca	FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g27850 FvH4_1g30510 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_1g30550 FvH4_7g04991 FvH4_7g05660 FvH4_7g05660 FvH4_7g05660 FvH4_7g05660 FvH4_7g05660 FvH4_7g05660 FvH4_c4g00010 FvH4_c4g00010 FvH4_c4g00010 FvH4_c4g00040 FvH4_c4g00040 FvH4_c4g00040 FvH4_c4g00040 FvH4_c4g00040 FvH4_c4g00040
malus_domestica	MD02G1255800.v1.1 MD07G1065400.v1.1
prunus_persica	Prupe.2G079500_v2.0.a1
pyrus_communis	pycom02g21670
rosa_chinensis	RchiOBHm_Chr1g0332601
rosa_laevigata	RLG00000029652 RLG00000029714
rosa_multiflora	Rmu_sc0004413.1_g000027
rosa_roxburghii	Rroxscaffold_4G00318110
rosa_rugosa	Rorug01G0105600 Rorug01G0105600
rosa_samantha	Rh1AG126700 Rh1BG096400 Rh1CG120500 Rh1DG131100
rosa_wichuraiana	Rw0G003960 Rw1G010660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1467
AccB1I	GGYRCC	1 cut(s)	1467
AciI	CCGC	5 cut(s)	123, 646, 1383, 1418, 1471
AclI	AACGTT	1 cut(s)	825
AclWI	GGATC	7 cut(s)	156, 171, 184, 198, 1044, 1057, 1393
AcsI	RAATTY	3 cut(s)	899, 1204, 1355
AcuI	CTGAAG	3 cut(s)	261, 717, 1395
AfaI	GTAC	3 cut(s)	1155, 1429, 1469
AfiI	CCNNNNNNNGG	3 cut(s)	151, 186, 538
AflII	CTTAAG	1 cut(s)	305
AgsI	TTSAA	3 cut(s)	46, 158, 853
AhdI	GACNNNNNGTC	1 cut(s)	1395
AhlI	ACTAGT	1 cut(s)	1292
AjnI	CCWGG	3 cut(s)	144, 310, 979
AjuI	GAANNNNNNNTTGG	2 cut(s)	1110, 1142
AluBI	AGCT	8 cut(s)	245, 589, 773, 876, 956, 1115, 1409, 1453
AluI	AGCT	8 cut(s)	245, 589, 773, 876, 956, 1115, 1409, 1453
Alw21I	GWGCWC	3 cut(s)	949, 958, 1072
Alw26I	GTCTC	5 cut(s)	522, 598, 677, 731, 1087
Alw44I	GTGCAC	1 cut(s)	945
AlwI	GGATC	7 cut(s)	156, 171, 184, 198, 1044, 1057, 1393
AlwNI	CAGNNNCTG	1 cut(s)	426
ApaLI	GTGCAC	1 cut(s)	945
ApeKI	GCWGC	4 cut(s)	5, 407, 773, 876
ApoI	RAATTY	3 cut(s)	899, 1204, 1355
Asp718I	GGTACC	1 cut(s)	1467
AspLEI	GCGC	1 cut(s)	172
AspS9I	GGNCC	2 cut(s)	301, 1397
AsuHPI	GGTGA	5 cut(s)	14, 629, 995, 1142, 1375
AvaII	GGWCC	2 cut(s)	301, 1397
BaeGI	GKGCMC	1 cut(s)	949
BamHI	GGATCC	2 cut(s)	176, 1049
BanI	GGYRCC	1 cut(s)	1467
BanII	GRGCYC	1 cut(s)	958
BbsI	GAAGAC	1 cut(s)	922
Bbv12I	GWGCWC	3 cut(s)	949, 958, 1072
BbvI	GCAGC	4 cut(s)	17, 394, 760, 863
BccI	CCATC	3 cut(s)	557, 656, 1239
BceAI	ACGGC	1 cut(s)	252
BciT130I	CCWGG	3 cut(s)	146, 312, 981
BcoDI	GTCTC	5 cut(s)	522, 598, 677, 731, 1087
BcuI	ACTAGT	1 cut(s)	1292
BfaI	CTAG	5 cut(s)	704, 716, 920, 1293, 1406
BfrI	CTTAAG	1 cut(s)	305
BglII	AGATCT	1 cut(s)	446
BisI	GCNGC	4 cut(s)	6, 408, 774, 877
BlpI	GCTNAGC	2 cut(s)	1111, 1449
BlsI	GCNGC	4 cut(s)	7, 409, 775, 878
Bme1390I	CCNGG	3 cut(s)	146, 312, 981
Bme18I	GGWCC	2 cut(s)	301, 1397
BmeRI	GACNNNNNGTC	1 cut(s)	1395
BmgT120I	GGNCC	2 cut(s)	301, 1397
BmiI	GGNNCC	6 cut(s)	136, 178, 302, 1051, 1399, 1469
BmrFI	CCNGG	3 cut(s)	146, 312, 981
BmrI	ACTGGG	1 cut(s)	307
BmsI	GCATC	8 cut(s)	253, 461, 716, 737, 770, 1370, 1431, 1473
BmuI	ACTGGG	1 cut(s)	307
BpiI	GAAGAC	1 cut(s)	922
Bpu1102I	GCTNAGC	2 cut(s)	1111, 1449
BpuEI	CTTGAG	1 cut(s)	919
BsaAI	YACGTR	1 cut(s)	1010
BsaBI	GATNNNNATC	2 cut(s)	451, 1384
BsaI	GGTCTC	2 cut(s)	522, 598
BsaJI	CCNNGG	3 cut(s)	130, 144, 880
Bsc4I	CCNNNNNNNGG	3 cut(s)	151, 186, 538
Bse1I	ACTGG	2 cut(s)	201, 302
Bse3DI	GCAATG	2 cut(s)	785, 1480
Bse8I	GATNNNNATC	2 cut(s)	451, 1384
BseBI	CCWGG	3 cut(s)	146, 312, 981
BseDI	CCNNGG	3 cut(s)	130, 144, 880
BseGI	GGATG	4 cut(s)	667, 781, 1385, 1422
BseJI	GATNNNNATC	2 cut(s)	451, 1384
BseLI	CCNNNNNNNGG	3 cut(s)	151, 186, 538
BseMI	GCAATG	2 cut(s)	785, 1480
BseMII	CTCAG	3 cut(s)	941, 1364, 1463
BseNI	ACTGG	2 cut(s)	201, 302
BseRI	GAGGAG	1 cut(s)	46
BseSI	GKGCMC	1 cut(s)	949
BseXI	GCAGC	4 cut(s)	17, 394, 760, 863
BsgI	GTGCAG	2 cut(s)	506, 1170
BshNI	GGYRCC	1 cut(s)	1467
BsiHKAI	GWGCWC	3 cut(s)	949, 958, 1072
BslFI	GGGAC	4 cut(s)	314, 408, 1266, 1383
BslI	CCNNNNNNNGG	3 cut(s)	151, 186, 538
BsmAI	GTCTC	5 cut(s)	522, 598, 677, 731, 1087
BsmBI	CGTCTC	1 cut(s)	1087
BsmFI	GGGAC	4 cut(s)	314, 408, 1266, 1383
Bso31I	GGTCTC	2 cut(s)	522, 598
Bsp1286I	GDGCHC	3 cut(s)	949, 958, 1072
Bsp143I	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
Bsp1720I	GCTNAGC	2 cut(s)	1111, 1449
BspACI	CCGC	5 cut(s)	123, 646, 1383, 1418, 1471
BspCNI	CTCAG	3 cut(s)	942, 1363, 1462
BspLI	GGNNCC	6 cut(s)	136, 178, 302, 1051, 1399, 1469
BspPI	GGATC	7 cut(s)	156, 171, 184, 198, 1044, 1057, 1393
BspT107I	GGYRCC	1 cut(s)	1467
BspTI	CTTAAG	1 cut(s)	305
BspTNI	GGTCTC	2 cut(s)	522, 598
BsrDI	GCAATG	2 cut(s)	785, 1480
BsrI	ACTGG	2 cut(s)	201, 302
BssECI	CCNNGG	3 cut(s)	130, 144, 880
BssMI	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
BssT1I	CCWWGG	1 cut(s)	880
Bst2UI	CCWGG	3 cut(s)	146, 312, 981
Bst4CI	ACNGT	5 cut(s)	163, 422, 652, 944, 1432
Bst6I	CTCTTC	5 cut(s)	41, 85, 108, 596, 1029
BstAFI	CTTAAG	1 cut(s)	305
BstBAI	YACGTR	1 cut(s)	1010
BstC8I	GCNNGC	6 cut(s)	110, 544, 798, 1002, 1149, 1420
BstDEI	CTNAG	5 cut(s)	533, 950, 1111, 1350, 1449
BstF5I	GGATG	4 cut(s)	667, 781, 1385, 1422
BstHHI	GCGC	1 cut(s)	172
BstKTI	GATC	7 cut(s)	151, 179, 193, 449, 816, 1052, 1388
BstMAI	GTCTC	5 cut(s)	522, 598, 677, 731, 1087
BstMBI	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
BstMWI	GCNNNNNNNGC	5 cut(s)	105, 953, 1184, 1415, 1459
BstNI	CCWGG	3 cut(s)	146, 312, 981
BstNSI	RCATGY	1 cut(s)	1004
BstSCI	CCNGG	3 cut(s)	144, 310, 979
BstSLI	GKGCMC	1 cut(s)	949
BstSNI	TACGTA	1 cut(s)	1010
BstV1I	GCAGC	4 cut(s)	17, 394, 760, 863
BstV2I	GAAGAC	1 cut(s)	922
BstX2I	RGATCY	4 cut(s)	176, 190, 446, 1049
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	4 cut(s)	176, 190, 446, 1049
BtsCI	GGATG	4 cut(s)	667, 781, 1385, 1422
BtsIMutI	CAGTG	2 cut(s)	657, 947
Cac8I	GCNNGC	6 cut(s)	110, 544, 798, 1002, 1149, 1420
CaiI	CAGNNNCTG	1 cut(s)	426
CfoI	GCGC	1 cut(s)	172
Cfr13I	GGNCC	2 cut(s)	301, 1397
CseI	GACGC	2 cut(s)	327, 1104
Csp6I	GTAC	3 cut(s)	1154, 1428, 1468
CviAII	CATG	8 cut(s)	173, 398, 793, 969, 1001, 1183, 1190, 1220
CviQI	GTAC	3 cut(s)	1154, 1428, 1468
DdeI	CTNAG	5 cut(s)	533, 950, 1111, 1350, 1449
DpnI	GATC	7 cut(s)	150, 178, 192, 448, 815, 1051, 1387
DpnII	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
DraI	TTTAAA	1 cut(s)	670
DriI	GACNNNNNGTC	1 cut(s)	1395
Eam1104I	CTCTTC	5 cut(s)	41, 85, 108, 596, 1029
Eam1105I	GACNNNNNGTC	1 cut(s)	1395
EarI	CTCTTC	5 cut(s)	41, 85, 108, 596, 1029
Ecl136II	GAGCTC	1 cut(s)	956
Eco105I	TACGTA	1 cut(s)	1010
Eco130I	CCWWGG	1 cut(s)	880
Eco24I	GRGCYC	1 cut(s)	958
Eco31I	GGTCTC	2 cut(s)	522, 598
Eco47I	GGWCC	2 cut(s)	301, 1397
Eco53kI	GAGCTC	1 cut(s)	956
Eco57I	CTGAAG	3 cut(s)	261, 717, 1395
EcoICRI	GAGCTC	1 cut(s)	956
EcoO109I	RGGNCCY	2 cut(s)	301, 1397
EcoRII	CCWGG	3 cut(s)	144, 310, 979
EcoT14I	CCWWGG	1 cut(s)	880
EcoT38I	GRGCYC	1 cut(s)	958
ErhI	CCWWGG	1 cut(s)	880
Esp3I	CGTCTC	1 cut(s)	1087
FaeI	CATG	8 cut(s)	176, 401, 796, 972, 1004, 1186, 1193, 1223
FaqI	GGGAC	4 cut(s)	314, 408, 1266, 1383
FatI	CATG	8 cut(s)	172, 397, 792, 968, 1000, 1182, 1189, 1219
FauI	CCCGC	1 cut(s)	1411
Fnu4HI	GCNGC	4 cut(s)	6, 408, 774, 877
FokI	GGATG	4 cut(s)	674, 768, 1392, 1409
FriOI	GRGCYC	1 cut(s)	958
Fsp4HI	GCNGC	4 cut(s)	6, 408, 774, 877
FspBI	CTAG	5 cut(s)	704, 716, 920, 1293, 1406
GlaI	GCGC	1 cut(s)	171
GluI	GCNGC	4 cut(s)	6, 408, 774, 877
HgaI	GACGC	2 cut(s)	327, 1104
HhaI	GCGC	1 cut(s)	172
Hin1II	CATG	8 cut(s)	176, 401, 796, 972, 1004, 1186, 1193, 1223
Hin6I	GCGC	1 cut(s)	170
HinP1I	GCGC	1 cut(s)	170
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	6 cut(s)	212, 220, 685, 965, 1194, 1299
HphI	GGTGA	5 cut(s)	14, 629, 995, 1142, 1375
Hpy166II	GTNNAC	4 cut(s)	317, 655, 947, 1198
Hpy188I	TCNGA	2 cut(s)	736, 808
Hpy188III	TCNNGA	4 cut(s)	583, 912, 1047, 1352
Hpy8I	GTNNAC	4 cut(s)	317, 655, 947, 1198
HpyAV	CCTTC	3 cut(s)	29, 39, 1352
HpyCH4III	ACNGT	5 cut(s)	163, 422, 652, 944, 1432
HpyCH4IV	ACGT	2 cut(s)	825, 1009
HpyCH4V	TGCA	8 cut(s)	452, 487, 796, 947, 1151, 1246, 1274, 1462
HpyF10VI	GCNNNNNNNGC	5 cut(s)	105, 953, 1184, 1415, 1459
HpyF3I	CTNAG	5 cut(s)	533, 950, 1111, 1350, 1449
HpySE526I	ACGT	2 cut(s)	825, 1009
Hsp92II	CATG	8 cut(s)	176, 401, 796, 972, 1004, 1186, 1193, 1223
HspAI	GCGC	1 cut(s)	170
KpnI	GGTACC	1 cut(s)	1471
Kzo9I	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
LmnI	GCTCC	2 cut(s)	140, 1075
Lsp1109I	GCAGC	4 cut(s)	17, 394, 760, 863
LweI	GCATC	8 cut(s)	253, 461, 716, 737, 770, 1370, 1431, 1473
MaeI	CTAG	5 cut(s)	704, 716, 920, 1293, 1406
MaeII	ACGT	2 cut(s)	825, 1009
MaeIII	GTNAC	3 cut(s)	821, 938, 1300
MalI	GATC	7 cut(s)	150, 178, 192, 448, 815, 1051, 1387
MboI	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
MboII	GAAGA	9 cut(s)	28, 42, 72, 95, 613, 723, 731, 927, 1046
MfeI	CAATTG	1 cut(s)	817
MflI	RGATCY	4 cut(s)	176, 190, 446, 1049
MhlI	GDGCHC	3 cut(s)	949, 958, 1072
MluCI	AATT	9 cut(s)	258, 434, 817, 899, 1101, 1204, 1323, 1355, 1443
MlyI	GAGTC	5 cut(s)	214, 221, 679, 1203, 1308
MmeI	TCCRAC	4 cut(s)	162, 346, 1097, 1370
MseI	TTAA	4 cut(s)	306, 437, 669, 1501
MspCI	CTTAAG	1 cut(s)	305
MspR9I	CCNGG	3 cut(s)	146, 312, 981
MunI	CAATTG	1 cut(s)	817
MvaI	CCWGG	3 cut(s)	146, 312, 981
MwoI	GCNNNNNNNGC	5 cut(s)	105, 953, 1184, 1415, 1459
NdeII	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
NlaIII	CATG	8 cut(s)	176, 401, 796, 972, 1004, 1186, 1193, 1223
NlaIV	GGNNCC	6 cut(s)	136, 178, 302, 1051, 1399, 1469
NmeAIII	GCCGAG	1 cut(s)	111
NmuCI	GTSAC	1 cut(s)	1300
NspI	RCATGY	1 cut(s)	1004
PaeI	GCATGC	1 cut(s)	1004
PfeI	GAWTC	1 cut(s)	965
PkrI	GCNGC	4 cut(s)	7, 409, 775, 878
PleI	GAGTC	5 cut(s)	214, 220, 679, 1202, 1307
PpsI	GAGTC	5 cut(s)	214, 220, 679, 1202, 1307
Ppu21I	YACGTR	1 cut(s)	1010
PpuMI	RGGWCCY	2 cut(s)	301, 1397
Psp124BI	GAGCTC	1 cut(s)	958
Psp1406I	AACGTT	1 cut(s)	825
Psp5II	RGGWCCY	2 cut(s)	301, 1397
Psp6I	CCWGG	3 cut(s)	144, 310, 979
PspGI	CCWGG	3 cut(s)	144, 310, 979
PspN4I	GGNNCC	6 cut(s)	136, 178, 302, 1051, 1399, 1469
PspPI	GGNCC	2 cut(s)	301, 1397
PspPPI	RGGWCCY	2 cut(s)	301, 1397
PstNI	CAGNNNCTG	1 cut(s)	426
PsuI	RGATCY	4 cut(s)	176, 190, 446, 1049
RsaI	GTAC	3 cut(s)	1155, 1429, 1469
RsaNI	GTAC	3 cut(s)	1154, 1428, 1468
SacI	GAGCTC	1 cut(s)	958
SaqAI	TTAA	4 cut(s)	306, 437, 669, 1501
SatI	GCNGC	4 cut(s)	6, 408, 774, 877
Sau3AI	GATC	7 cut(s)	148, 176, 190, 446, 813, 1049, 1385
Sau96I	GGNCC	2 cut(s)	301, 1397
SchI	GAGTC	5 cut(s)	214, 221, 679, 1203, 1308
ScrFI	CCNGG	3 cut(s)	146, 312, 981
SduI	GDGCHC	3 cut(s)	949, 958, 1072
SfaNI	GCATC	8 cut(s)	253, 461, 716, 737, 770, 1370, 1431, 1473
SinI	GGWCC	2 cut(s)	301, 1397
SmlI	CTYRAG	2 cut(s)	305, 934
SmoI	CTYRAG	2 cut(s)	305, 934
SnaBI	TACGTA	1 cut(s)	1010
SpeI	ACTAGT	1 cut(s)	1292
SphI	GCATGC	1 cut(s)	1004
Sse9I	AATT	9 cut(s)	258, 434, 817, 899, 1101, 1204, 1323, 1355, 1443
SsiI	CCGC	5 cut(s)	123, 646, 1383, 1418, 1471
SspMI	CTAG	5 cut(s)	704, 716, 920, 1293, 1406
SstI	GAGCTC	1 cut(s)	958
StyD4I	CCNGG	3 cut(s)	144, 310, 979
StyI	CCWWGG	1 cut(s)	880
TaaI	ACNGT	5 cut(s)	163, 422, 652, 944, 1432
TaiI	ACGT	2 cut(s)	828, 1012
TaqI	TCGA	2 cut(s)	1234, 1388
TasI	AATT	9 cut(s)	258, 434, 817, 899, 1101, 1204, 1323, 1355, 1443
TfiI	GAWTC	1 cut(s)	965
Tru1I	TTAA	4 cut(s)	306, 437, 669, 1501
Tru9I	TTAA	4 cut(s)	306, 437, 669, 1501
TscAI	CASTG	2 cut(s)	657, 954
TseFI	GTSAC	1 cut(s)	1300
TseI	GCWGC	4 cut(s)	5, 407, 773, 876
Tsp45I	GTSAC	1 cut(s)	1300
TspDTI	ATGAA	4 cut(s)	263, 912, 957, 1047
TspGWI	ACGGA	1 cut(s)	1415
TspRI	CASTG	2 cut(s)	657, 954
Vha464I	CTTAAG	1 cut(s)	305
VneI	GTGCAC	1 cut(s)	945
VpaK11BI	GGWCC	2 cut(s)	301, 1397
XapI	RAATTY	3 cut(s)	899, 1204, 1355
XceI	RCATGY	1 cut(s)	1004
XspI	CTAG	5 cut(s)	704, 716, 920, 1293, 1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.