Prupe.2G079500_v2.0.a1

Belongs to the peptidase M18 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
12158904 .. 12166630
7727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G079500.1

Sequence Viewer

Length: 1593 bp
ATGGCAGCGATAACTCGGTTGCAGCAACTGCAACTCCTCCACCACCCTCCTCTCACCCTCAGGCGTTCCATTCTCTTTCACAAGCCCAAACAACTCACTCGCTCACGCCCTCGCAGTTTCTCCACCTCTCCAATCCTCTGCTCCAACAATTCTCAAAACACCCCCGAGAGCTCGGCTTCAACGGTGGGAGCAAATGCGTCAATTGTTGGGGATCTACTCGACTACCTCAACGAGTCTTGGACTCATTTTCATGCTACGGCTGAAGCGAAAAGACAACTTATTGCTGCTGGTTTTCATTTGCTGAATGAGAATGATGAGTGGGACCTCAAGCCTGGTGGACGCTACTTCTTTACACGAAACATGTCTTGTTTGGTTGCATTTTCTGTTGGAGAGAAGTATACTGTTGGTAATGGTTTCCATGTGATTGCTGCACACACAGACAGTCCATGTCTAAAATTAAAACCAAGATCTGCATCATCCAAGTCTGGATACCTAATGATCAATGTGCAGACATATGGAAGTGGTTTATGGCATACTTGGTTTGATAGAGACCTAAGCGTAGCAGGCAGGGTCATATTGAGAGGCAGCAACGGTTCCTTTATGCATAAGCTTGTCAAAGTGAAGAGACCTCTGTTACGAATACCAACACTGGCCATTCACCTTGACCGCACAGTGAACAAGGATGGATTTAAACCAAATGTAGAGACTCAACTAATTCCATTACTGGCATCGAAACTAGAAGAAGCATCTGTGGAGACAAAAGAGAAAAGTACCACAACATCTTCAAAAGCGGCTCATCATCCATTGCTCATGCAGGCTCTCTCAGATGAGCTCAATTCTAACATTGACGACATAGTGAGTATTGAGCTGAATGTTTGTGATACACAACCTAGCTGCCTTGGAGGTGGAAACGATGAATTTATTTTTTCAGGAAGGTTAGATAATCTTGCCTCAAGTTATTGCGCGTTAAGGGCTCTCATTGATTCATGTAAATCACCTGGTGATTTATCAAGTGAACAGGCTATACGGATGGTTGCTTTATTTGACAATGAAGAGGTTGGTTCCGGCTCAATTCAGGGGGCTGGTGCTCCAACTATGTTTCAGGCTATGAGACGTATAATTAGTTGCTTAGCTGACAAATATGTTGGTGAAAATGCATTTGAGCGTGCAATTCGCAAATCATTTCTTGTGTCAGCAGACATGGCTCATGGTGTACACCCAAATTTCATGGACAAGCATGAAGAACACCATCGACCAGAAATGCAAAAGGGACTCGTTATCAAGCATAATGCAAACCAGCGCTATGCTACCAGTGGAGTTACATCTTTTCTTTTCAAAGAAATTGGCAAAATCCACAACCTTCCAACTCAGGAATTTGTGGTGAGAAATGATATGGGATGCGGATCTACCATAGGTCCCATACTAGCTTCAGGGGCTGGTATTCGTACTGTTGATTGTGGCATCCCTCAACTTTCTATGCACAGTGTTAGAGAGATATGTGGGAAGGAAGATATAGACATTGCTTACAAGCACTTCAAGGCATTCTACCAAGCTTTCTCAAGCATAGACAAGAAGCTGAATGTAGATTCGTAA

Protein Analysis

531

Amino Acids

58.47

Weight (kDa)

8.53

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 398
AccII CGCG 1 cut(s) 965
AciI CCGC 3 cut(s) 667, 791, 1401
AclWI GGATC 2 cut(s) 219, 1411
AcoI YGGCCR 1 cut(s) 651
AcsI RAATTY 3 cut(s) 917, 1222, 1373
AcuI CTGAAG 2 cut(s) 282, 1413
AdeI CACNNNGTG 1 cut(s) 1001
AfaI GTAC 3 cut(s) 772, 1215, 1447
AfeI AGCGCT 1 cut(s) 1301
AflIII ACRYGT 1 cut(s) 360
AgsI TTSAA 4 cut(s) 180, 786, 1336, 1537
AjnI CCWGG 2 cut(s) 331, 997
AluBI AGCT 9 cut(s) 171, 610, 832, 868, 894, 1133, 1427, 1553, 1576
AluI AGCT 9 cut(s) 171, 610, 832, 868, 894, 1133, 1427, 1553, 1576
Alw21I GWGCWC 3 cut(s) 173, 834, 1090
Alw26I GTCTC 5 cut(s) 543, 619, 698, 749, 1105
AlwI GGATC 2 cut(s) 219, 1411
AlwNI CAGNNNCTG 2 cut(s) 28, 1436
Ama87I CYCGRG 1 cut(s) 164
Aor51HI AGCGCT 1 cut(s) 1301
AoxI GGCC 1 cut(s) 651
ApeKI GCWGC 6 cut(s) 5, 22, 284, 428, 585, 894
ApoI RAATTY 3 cut(s) 917, 1222, 1373
AspLEI GCGC 2 cut(s) 965, 1302
AspS9I GGNCC 2 cut(s) 322, 1415
AsuHPI GGTGA 6 cut(s) 46, 650, 987, 1013, 1160, 1393
AvaI CYCGRG 1 cut(s) 164
AvaII GGWCC 2 cut(s) 322, 1415
AxyI CCTNAGG 1 cut(s) 59
BalI TGGCCA 1 cut(s) 653
BanII GRGCYC 3 cut(s) 173, 834, 976
Bbv12I GWGCWC 3 cut(s) 173, 834, 1090
BbvI GCAGC 6 cut(s) 17, 34, 271, 415, 597, 881
BccI CCATC 3 cut(s) 677, 1024, 1257
BceAI ACGGC 1 cut(s) 273
BciT130I CCWGG 2 cut(s) 333, 999
BciVI GTATCC 1 cut(s) 482
BclI TGATCA 1 cut(s) 498
BcoDI GTCTC 5 cut(s) 543, 619, 698, 749, 1105
BfaI CTAG 3 cut(s) 737, 891, 1424
BfoI RGCGCY 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 482
BglII AGATCT 1 cut(s) 467
BisI GCNGC 7 cut(s) 6, 23, 285, 429, 586, 792, 895
BlpI GCTNAGC 1 cut(s) 1129
BlsI GCNGC 7 cut(s) 7, 24, 286, 430, 587, 793, 896
Bme1390I CCNGG 2 cut(s) 333, 999
Bme18I GGWCC 2 cut(s) 322, 1415
BmeT110I CYCGRG 1 cut(s) 164
BmgT120I GGNCC 2 cut(s) 322, 1415
BmiI GGNNCC 4 cut(s) 323, 595, 1063, 1417
BmrFI CCNGG 2 cut(s) 333, 999
BmsI GCATC 5 cut(s) 482, 737, 755, 1388, 1470
Bpu10I CCTNAGC 1 cut(s) 554
Bpu1102I GCTNAGC 1 cut(s) 1129
BpuEI CTTGAG 3 cut(s) 311, 937, 1543
BsaBI GATNNNNATC 2 cut(s) 472, 1402
BsaI GGTCTC 2 cut(s) 543, 619
BsaJI CCNNGG 1 cut(s) 898
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bse1I ACTGG 3 cut(s) 654, 729, 1311
Bse21I CCTNAGG 1 cut(s) 59
Bse3DI GCAATG 2 cut(s) 803, 1518
Bse8I GATNNNNATC 2 cut(s) 472, 1402
BseBI CCWGG 2 cut(s) 333, 999
BseDI CCNNGG 1 cut(s) 898
BseGI GGATG 6 cut(s) 476, 688, 799, 1035, 1403, 1461
BseJI GATNNNNATC 2 cut(s) 472, 1402
BseMI GCAATG 2 cut(s) 803, 1518
BseMII CTCAG 3 cut(s) 73, 837, 1382
BseNI ACTGG 3 cut(s) 654, 729, 1311
BseRI GAGGAG 2 cut(s) 26, 39
BseXI GCAGC 6 cut(s) 17, 34, 271, 415, 597, 881
BsgI GTGCAG 2 cut(s) 414, 527
Bsh1236I CGCG 1 cut(s) 965
BshFI GGCC 1 cut(s) 653
BsiHKAI GWGCWC 3 cut(s) 173, 834, 1090
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 1 cut(s) 1065
BslFI GGGAC 3 cut(s) 335, 1284, 1401
BsmAI GTCTC 5 cut(s) 543, 619, 698, 749, 1105
BsmBI CGTCTC 1 cut(s) 1105
BsmFI GGGAC 3 cut(s) 335, 1284, 1401
BsmI GAATGC 1 cut(s) 1541
BsnI GGCC 1 cut(s) 653
Bso31I GGTCTC 2 cut(s) 543, 619
BsoBI CYCGRG 1 cut(s) 164
Bsp1286I GDGCHC 4 cut(s) 173, 834, 976, 1090
Bsp1407I TGTACA 1 cut(s) 1213
Bsp143I GATC 4 cut(s) 211, 467, 498, 1403
Bsp1720I GCTNAGC 1 cut(s) 1129
BspACI CCGC 3 cut(s) 667, 791, 1401
BspANI GGCC 1 cut(s) 653
BspCNI CTCAG 3 cut(s) 72, 836, 1381
BspFNI CGCG 1 cut(s) 965
BspLI GGNNCC 4 cut(s) 323, 595, 1063, 1417
BspPI GGATC 2 cut(s) 219, 1411
BspTNI GGTCTC 2 cut(s) 543, 619
BsrDI GCAATG 2 cut(s) 803, 1518
BsrGI TGTACA 1 cut(s) 1213
BsrI ACTGG 3 cut(s) 654, 729, 1311
BssECI CCNNGG 1 cut(s) 898
BssMI GATC 4 cut(s) 211, 467, 498, 1403
BssNAI GTATAC 1 cut(s) 399
BssT1I CCWWGG 1 cut(s) 898
Bst1107I GTATAC 1 cut(s) 399
Bst2UI CCWGG 2 cut(s) 333, 999
Bst4CI ACNGT 7 cut(s) 184, 403, 443, 593, 673, 1450, 1484
Bst6I CTCTTC 2 cut(s) 617, 1047
BstAPI GCANNNNNTGC 1 cut(s) 28
BstAUI TGTACA 1 cut(s) 1213
BstC8I GCNNGC 3 cut(s) 565, 816, 1167
BstDEI CTNAG 5 cut(s) 59, 554, 823, 1129, 1368
BstF5I GGATG 6 cut(s) 476, 688, 799, 1035, 1403, 1461
BstFNI CGCG 1 cut(s) 965
BstH2I RGCGCY 1 cut(s) 1303
BstHHI GCGC 2 cut(s) 965, 1302
BstKTI GATC 4 cut(s) 214, 470, 501, 1406
BstMAI GTCTC 5 cut(s) 543, 619, 698, 749, 1105
BstMBI GATC 4 cut(s) 211, 467, 498, 1403
BstMWI GCNNNNNNNGC 5 cut(s) 28, 564, 971, 1202, 1433
BstNI CCWGG 2 cut(s) 333, 999
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 2 cut(s) 331, 997
BstUI CGCG 1 cut(s) 965
BstV1I GCAGC 6 cut(s) 17, 34, 271, 415, 597, 881
BstX2I RGATCY 3 cut(s) 211, 467, 1403
BstYI RGATCY 3 cut(s) 211, 467, 1403
BstZ17I GTATAC 1 cut(s) 399
Bsu36I CCTNAGG 1 cut(s) 59
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 1 cut(s) 653
BtsCI GGATG 6 cut(s) 476, 688, 799, 1035, 1403, 1461
BtsIMutI CAGTG 4 cut(s) 647, 678, 1318, 1489
Cac8I GCNNGC 3 cut(s) 565, 816, 1167
CaiI CAGNNNCTG 2 cut(s) 28, 1436
CfoI GCGC 2 cut(s) 965, 1302
Cfr13I GGNCC 2 cut(s) 322, 1415
CseI GACGC 2 cut(s) 186, 348
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 3 cut(s) 771, 1214, 1446
CspCI CAANNNNNGTGG 2 cut(s) 316, 351
CviQI GTAC 3 cut(s) 771, 1214, 1446
DdeI CTNAG 5 cut(s) 59, 554, 823, 1129, 1368
DpnI GATC 4 cut(s) 213, 469, 500, 1405
DpnII GATC 4 cut(s) 211, 467, 498, 1403
DraI TTTAAA 1 cut(s) 691
DraIII CACNNNGTG 1 cut(s) 1001
EaeI YGGCCR 1 cut(s) 651
Eam1104I CTCTTC 2 cut(s) 617, 1047
EarI CTCTTC 2 cut(s) 617, 1047
Ecl136II GAGCTC 2 cut(s) 171, 832
Eco130I CCWWGG 1 cut(s) 898
Eco24I GRGCYC 3 cut(s) 173, 834, 976
Eco31I GGTCTC 2 cut(s) 543, 619
Eco47I GGWCC 2 cut(s) 322, 1415
Eco47III AGCGCT 1 cut(s) 1301
Eco53kI GAGCTC 2 cut(s) 171, 832
Eco57I CTGAAG 2 cut(s) 282, 1413
Eco81I CCTNAGG 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 164
EcoICRI GAGCTC 2 cut(s) 171, 832
EcoO109I RGGNCCY 2 cut(s) 322, 1415
EcoRII CCWGG 2 cut(s) 331, 997
EcoT14I CCWWGG 1 cut(s) 898
EcoT22I ATGCAT 2 cut(s) 606, 1159
EcoT38I GRGCYC 3 cut(s) 173, 834, 976
ErhI CCWWGG 1 cut(s) 898
Esp3I CGTCTC 1 cut(s) 1105
FaqI GGGAC 3 cut(s) 335, 1284, 1401
FauNDI CATATG 1 cut(s) 514
FbaI TGATCA 1 cut(s) 498
FblI GTMKAC 1 cut(s) 398
Fnu4HI GCNGC 7 cut(s) 6, 23, 285, 429, 586, 792, 895
FokI GGATG 6 cut(s) 463, 695, 786, 1042, 1410, 1448
FriOI GRGCYC 3 cut(s) 173, 834, 976
Fsp4HI GCNGC 7 cut(s) 6, 23, 285, 429, 586, 792, 895
FspBI CTAG 3 cut(s) 737, 891, 1424
GlaI GCGC 2 cut(s) 964, 1301
GluI GCNGC 7 cut(s) 6, 23, 285, 429, 586, 792, 895
HaeII RGCGCY 1 cut(s) 1303
HaeIII GGCC 1 cut(s) 653
HapII CCGG 1 cut(s) 1065
HgaI GACGC 2 cut(s) 186, 348
HhaI GCGC 2 cut(s) 965, 1302
Hin6I GCGC 2 cut(s) 963, 1300
HinP1I GCGC 2 cut(s) 963, 1300
HindIII AAGCTT 2 cut(s) 608, 1551
HinfI GANTC 6 cut(s) 233, 241, 706, 983, 1272, 1586
HpaII CCGG 1 cut(s) 1065
HphI GGTGA 6 cut(s) 46, 650, 987, 1013, 1160, 1393
Hpy166II GTNNAC 6 cut(s) 338, 399, 676, 1016, 1214, 1216
Hpy188I TCNGA 1 cut(s) 826
Hpy188III TCNNGA 3 cut(s) 486, 930, 1370
Hpy8I GTNNAC 6 cut(s) 338, 399, 676, 1016, 1214, 1216
HpyAV CCTTC 3 cut(s) 927, 1370, 1498
HpyCH4III ACNGT 7 cut(s) 184, 403, 443, 593, 673, 1450, 1484
HpyCH4IV ACGT 1 cut(s) 1114
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 564, 971, 1202, 1433
HpyF3I CTNAG 5 cut(s) 59, 554, 823, 1129, 1368
HpySE526I ACGT 1 cut(s) 1114
HspAI GCGC 2 cut(s) 963, 1300
Ksp22I TGATCA 1 cut(s) 498
Kzo9I GATC 4 cut(s) 211, 467, 498, 1403
LmnI GCTCC 3 cut(s) 146, 188, 1093
Lsp1109I GCAGC 6 cut(s) 17, 34, 271, 415, 597, 881
LweI GCATC 5 cut(s) 482, 737, 755, 1388, 1470
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 3 cut(s) 737, 891, 1424
MaeII ACGT 1 cut(s) 1114
MaeIII GTNAC 2 cut(s) 633, 1318
MalI GATC 4 cut(s) 213, 469, 500, 1405
MboI GATC 4 cut(s) 211, 467, 498, 1403
MboII GAAGA 6 cut(s) 634, 752, 774, 1064, 1253, 1520
MfeI CAATTG 1 cut(s) 201
MflI RGATCY 3 cut(s) 211, 467, 1403
MhlI GDGCHC 4 cut(s) 173, 834, 976, 1090
MlsI TGGCCA 1 cut(s) 653
MluNI TGGCCA 1 cut(s) 653
MlyI GAGTC 4 cut(s) 235, 242, 700, 1266
MmeI TCCRAC 4 cut(s) 168, 367, 1115, 1388
Mox20I TGGCCA 1 cut(s) 653
Mph1103I ATGCAT 2 cut(s) 606, 1159
MscI TGGCCA 1 cut(s) 653
MseI TTAA 3 cut(s) 458, 690, 968
MslI CAYNNNNRTG 1 cut(s) 249
Msp20I TGGCCA 1 cut(s) 653
MspI CCGG 1 cut(s) 1065
MspR9I CCNGG 2 cut(s) 333, 999
MunI CAATTG 1 cut(s) 201
Mva1269I GAATGC 1 cut(s) 1541
MvaI CCWGG 2 cut(s) 333, 999
MvnI CGCG 1 cut(s) 965
MwoI GCNNNNNNNGC 5 cut(s) 28, 564, 971, 1202, 1433
NdeI CATATG 1 cut(s) 514
NdeII GATC 4 cut(s) 211, 467, 498, 1403
NlaIV GGNNCC 4 cut(s) 323, 595, 1063, 1417
NmeAIII GCCGAG 1 cut(s) 152
NsiI ATGCAT 2 cut(s) 606, 1159
NspI RCATGY 1 cut(s) 364
PciI ACATGT 1 cut(s) 360
PcsI WCGNNNNNNNCGW 1 cut(s) 263
PctI GAATGC 1 cut(s) 1541
PfeI GAWTC 2 cut(s) 983, 1586
PkrI GCNGC 7 cut(s) 7, 24, 286, 430, 587, 793, 896
PleI GAGTC 4 cut(s) 235, 241, 700, 1266
PpsI GAGTC 4 cut(s) 235, 241, 700, 1266
PpuMI RGGWCCY 2 cut(s) 322, 1415
PscI ACATGT 1 cut(s) 360
Psp124BI GAGCTC 2 cut(s) 173, 834
Psp5II RGGWCCY 2 cut(s) 322, 1415
Psp6I CCWGG 2 cut(s) 331, 997
PspGI CCWGG 2 cut(s) 331, 997
PspN4I GGNNCC 4 cut(s) 323, 595, 1063, 1417
PspPI GGNCC 2 cut(s) 322, 1415
PspPPI RGGWCCY 2 cut(s) 322, 1415
PsrI GAACNNNNNNTAC 2 cut(s) 1008, 1040
PstNI CAGNNNCTG 2 cut(s) 28, 1436
PsuI RGATCY 3 cut(s) 211, 467, 1403
RsaI GTAC 3 cut(s) 772, 1215, 1447
RsaNI GTAC 3 cut(s) 771, 1214, 1446
RseI CAYNNNNRTG 1 cut(s) 249
SacI GAGCTC 2 cut(s) 173, 834
SaqAI TTAA 3 cut(s) 458, 690, 968
SatI GCNGC 7 cut(s) 6, 23, 285, 429, 586, 792, 895
Sau3AI GATC 4 cut(s) 211, 467, 498, 1403
Sau96I GGNCC 2 cut(s) 322, 1415
SchI GAGTC 4 cut(s) 235, 242, 700, 1266
ScrFI CCNGG 2 cut(s) 333, 999
SduI GDGCHC 4 cut(s) 173, 834, 976, 1090
SexAI ACCWGGT 1 cut(s) 997
SfaNI GCATC 5 cut(s) 482, 737, 755, 1388, 1470
SinI GGWCC 2 cut(s) 322, 1415
SmiMI CAYNNNNRTG 1 cut(s) 249
SmlI CTYRAG 3 cut(s) 326, 952, 1558
SmoI CTYRAG 3 cut(s) 326, 952, 1558
SsiI CCGC 3 cut(s) 667, 791, 1401
SspMI CTAG 3 cut(s) 737, 891, 1424
SstI GAGCTC 2 cut(s) 173, 834
StyD4I CCNGG 2 cut(s) 331, 997
StyI CCWWGG 1 cut(s) 898
TaaI ACNGT 7 cut(s) 184, 403, 443, 593, 673, 1450, 1484
TaiI ACGT 1 cut(s) 1117
TaqI TCGA 3 cut(s) 219, 731, 1252
TatI WGTACW 1 cut(s) 1213
TauI GCSGC 1 cut(s) 794
TfiI GAWTC 2 cut(s) 983, 1586
Tru1I TTAA 3 cut(s) 458, 690, 968
Tru9I TTAA 3 cut(s) 458, 690, 968
TscAI CASTG 4 cut(s) 654, 678, 1318, 1489
TseI GCWGC 6 cut(s) 5, 22, 284, 428, 585, 894
TspDTI ATGAA 7 cut(s) 239, 284, 930, 975, 1065, 1216, 1254
TspGWI ACGGA 1 cut(s) 1042
TspRI CASTG 4 cut(s) 654, 678, 1318, 1489
VpaK11BI GGWCC 2 cut(s) 322, 1415
XapI RAATTY 3 cut(s) 917, 1222, 1373
XceI RCATGY 1 cut(s) 364
XmiI GTMKAC 1 cut(s) 398
XspI CTAG 3 cut(s) 737, 891, 1424
Zsp2I ATGCAT 2 cut(s) 606, 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.