Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008419

Physical Location & Seq

Genomic Coordinates Forward (+)

8839771 .. 8846934

Gene Structure 7164 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g09990.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGGCCTCCGACTCTTTCAACAACGGCCCTTCGTCCCCGGATGACTCCATCTCCAGCCCAATCGGCAACACCTTCTCTTCTCCCGCCGACGCAGCCGCCTCTCGCCAGAGACGCCGCCGCCGATCCACCACCCCCACCGCCTTCGCAACCCCTCCGGCCTCCCGCTTCGCCGCCTCCGAAACAACCCCCACCCCATCCCGCAGGCGCCGCACCAACGGCACCGCGCGTACTCCCCCCTCCACCGATGACGCGCCGCCGTCCTCCGAAGCCGGCGACAGCTACGGCATGGACGAGGACCGCCCCACCTTCGTCTGGGGCACCAATATCAGTGTTAATGATGTTAAGCTCGCCATTATTAGGTTTTTGAAGAACTTTCGGGACCAATCGCAGAATTCGGAGAGCGAGTATCTTACTGAAGGGAAGTACATTGAGGCCATCAAGAGGATTCTGGAAATGGAAGGCGATTCGCTCGATGTGGATGCTCGAAATGTGTTTGATTACGATCCGGATTTGTATGCCAAGATGGTTAGGTATCCACTTGAGGTTCTTGCTATTTTCGACATTGTTTTGATGGAAATGTTGCCTGTCATAAACCCCTTGTTTGAGAAGCACATTCAGACTCGGATTTTCAATCTCAAAACGTCAACTTCCATGAGAAATCTGAACCCATCTGATATTGAGAGGATGGTTTCGATAAAAGGAATGATTATTCGATCTAGTTCAATAATACCCGAGATAAGGGAAGCAATATTTAGATGCCTAGTGTGTGGTTATTACTCCGACCCTCTTCCTGTAGAAAAAGGGAAAATAAATGAACCTACTAGATGCATGAAGGAAGAGTGTCAAGCTAAAAATTCTATGACACTTGTCCACAATCGTTGCAGGTTTACTGATAAACAGATTGTGAGGCTCCAGGAGATGCCTGATGAGATCCCTGAAGGTGGTACACCACATACTGTGAGTTTGCTGATGCATGACAAACTGGTTGATGCTGGAAAACCAGGTGACAGAGTTGAGGTCACTGGAATATATCGGGCTATGAGCGTAAGAGTTGGACCAACGCAGAGAACTGTAAAATCATTATTCAAGACTTACATCGATTGTCTGCATATAAAAAAGTCTGACAAGTCAAGAATGCTGGCGGAGGAGCAGACGGAAGTTGAGAATTCCTTGGTTGGAGATTCAGAAGAGATTATTTTTGATGAAAAGAAGGTGGAACAATTGAAAGAGCTGGCGAAACAGCCTGATATATATGATCGCCTAACCAGATCTTTGGCACCAAATATCTGGGAGTTAGACGATGTCAAAAAAGGCCTTCTTTGCCAGCTTTTTGGTGGGAATGCTTTGAAGTTGCCATCTGGTGCTAGGTTCCGTGGGGATATTAATATTCTTCTTGTTGGTGATCCTGGAACCAGCAAGTCCCAGCTGCTCCAGTACATACACAAGCTTGCTCCCCGTGGCATATACACTAGTGGAAGAGGGAGTTCTGCTGTTGGTTTGACTGCTTATGTTGCGAAGGATCCTGAAACAGGGGAAACCGTTTTAGAGAGTGGAGCCTTAGTTTTGAGTGATAGAGGCATTTGTTGCATTGATGAATTTGACAAAATGTCTGACAGCGCAAGGAGCATGTTACACGAGGTGATGGAACAGCAAACTGTGTCAATAGCAAAGGCTGGAATCATTGCTTCCCTTAATGCTAGGACATCAGTCCTGGCTTGTGCGAATCCAAGTGGATCTCGCTATAATCCTCGCTTGTCAGTAATTGACAACATTCACCTTCCTCCTACCTTATTATCTAGGTTCGATCTGATCTACTTAATCCTTGACAAGGCTGATGAGCAGACAGACAGGCGCCTTGCAAAGCATATTGTTGCTTTGCACTTTGAGAATCCTGAGACTGTACAGCAGGATGTTTTAGACCTTCCCACGTTGACTGCTTATGTTGGATACGCTCGAAAGCATATTCACCCACAATTATCTGATGAAGCTGCAGAGGAATTGACTCGTGGCTATGTAGAGTTGAGGAGGAGAGGAAATTTTCCAGGCAGCAGCAAGAAGGTGATAACTGCAACACCTAGGCAAATTGAGAGTTTGATACGTCTTAGTGAAGCTCTAGCTCGGATTCGGTTTTCAGAAACGGTTGAGAAGCATGATGTAATGGAGGCATTTCGGCTTCTAGAAGTTGCAATGCAACAATCAGCAACAGATCACTCCACGGGAACAATTGACATGGATCTTATTAATACTGGAATTTCGGCAAGTGAAAGAATGAGACGGGAAAATCTAGTGTCATCAGCCCGCAACATAATTATGGAGAAGATGCAACTTGGGGGACCCTCAATGCGTTTGTTAGAGCTGCTGGAGGAGCTGAAGAAGCAGAGTTCTAGCAGCGAAATTCACCTCAACGATCTTAGGAATGCACTGGCTACACTTGCAAGTGAGGGATTTGTGGCTGTTCAGGGCGACAGTGTCAAAAGAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0000785 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

828

Amino Acids

92.19

Weight (kDa)

6.11

Isoelectric Point (pI)

54.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	118 - 211	5.7e-12	MCM N-terminal domain
MCM_OB	PF17207	218 - 347	1.5e-40	MCM OB domain
MCM	PF00493	405 - 627	3.8e-101	MCM P-loop domain
AAA_5	PF07728	462 - 578	7.8e-07	AAA domain (dynein-related subfamily)
MCM_lid	PF17855	643 - 729	7e-27	MCM AAA-lid domain
WHD_MCM4	PF21128	753 - 827	3.4e-07	MCM4, winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16440
fragaria_vesca	FvH4_2g09990
malus_domestica	MD00G1085600.v1.1 MD10G1066500.v1.1
prunus_persica	Prupe.8G088400_v2.0.a1
pyrus_communis	pycom05g04970 pycom05g04980 pycom10g05200
rosa_chinensis	RchiOBHm_Chr6g0266881 RchiOBHm_Chr6g0266891
rosa_laevigata	RLG00000014063 RLG00000014064 RLG00000014065
rosa_multiflora	Rmu_co8507775.1_g000001 Rmu_sc0021142.1_g000001 Rmu_sc0036177.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201330
rosa_rugosa	Rorug06G0027900
rosa_samantha	Rh6AG149000 Rh6BG150000 Rh6CG144900 Rh6DG134200
rosa_wichuraiana	Rw6G012890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	873
AccB1I	GGYRCC	5 cut(s)	204, 218, 317, 1276, 1851
AccII	CGCG	3 cut(s)	224, 226, 251
AccIII	TCCGGA	1 cut(s)	505
AclWI	GGATC	8 cut(s)	117, 497, 925, 1397, 1514, 1527, 1741, 2241
AcsI	RAATTY	7 cut(s)	391, 853, 1165, 1595, 2035, 2250, 2394
AcuI	CTGAAG	3 cut(s)	435, 957, 2390
AcyI	GRCGYC	3 cut(s)	112, 205, 1852
AdeI	CACNNNGTG	1 cut(s)	1639
AfaI	GTAC	5 cut(s)	229, 425, 946, 1436, 1902
AfiI	CCNNNNNNNGG	7 cut(s)	312, 357, 441, 738, 941, 1529, 1828
AgsI	TTSAA	7 cut(s)	19, 367, 631, 723, 1087, 1225, 1348
AhdI	GACNNNNNGTC	1 cut(s)	1606
AhlI	ACTAGT	1 cut(s)	1469
AjnI	CCWGG	5 cut(s)	912, 1000, 1405, 1710, 2041
Alw26I	GTCTC	3 cut(s)	103, 1889, 2266
AlwI	GGATC	8 cut(s)	117, 497, 925, 1397, 1514, 1527, 1741, 2241
Ama87I	CYCGRG	1 cut(s)	731
Aor13HI	TCCGGA	1 cut(s)	505
AoxI	GGCC	5 cut(s)	3, 25, 156, 432, 1312
ApeKI	GCWGC	7 cut(s)	92, 1426, 1988, 2046, 2049, 2356, 2388
ApoI	RAATTY	7 cut(s)	391, 853, 1165, 1595, 2035, 2250, 2394
AseI	ATTAAT	2 cut(s)	1383, 2241
AspA2I	CCTAGG	1 cut(s)	2075
AspLEI	GCGC	5 cut(s)	207, 226, 253, 1619, 1854
AspS9I	GGNCC	5 cut(s)	26, 295, 379, 1055, 2333
AsuC2I	CCSGG	1 cut(s)	38
AsuHPI	GGTGA	7 cut(s)	1016, 1412, 1651, 1766, 1958, 2071, 2390
AvaI	CYCGRG	1 cut(s)	731
AvaII	GGWCC	4 cut(s)	295, 379, 1055, 2333
AvrII	CCTAGG	1 cut(s)	2075
BaeGI	GKGCMC	1 cut(s)	320
BamHI	GGATCC	1 cut(s)	1519
BanI	GGYRCC	5 cut(s)	204, 218, 317, 1276, 1851
BauI	CACGAG	2 cut(s)	1634, 2004
BbvI	GCAGC	7 cut(s)	104, 1413, 1975, 2058, 2061, 2343, 2400
BccI	CCATC	9 cut(s)	56, 202, 443, 517, 565, 676, 679, 1363, 1636
BceAI	ACGGC	4 cut(s)	40, 232, 241, 298
BcgI	CGANNNNNNTGC	2 cut(s)	461, 495
BciT130I	CCWGG	5 cut(s)	914, 1002, 1407, 1712, 2043
BciVI	GTATCC	2 cut(s)	543, 1940
BcnI	CCSGG	1 cut(s)	38
BcoDI	GTCTC	3 cut(s)	103, 1889, 2266
BcuI	ACTAGT	1 cut(s)	1469
BfmI	CTRYAG	2 cut(s)	792, 1989
BfoI	RGCGCY	2 cut(s)	208, 1855
BfuAI	ACCTGC	1 cut(s)	873
BfuI	GTATCC	2 cut(s)	543, 1940
BglI	GCCNNNNNGGC	1 cut(s)	63
BglII	AGATCT	1 cut(s)	1268
BlnI	CCTAGG	1 cut(s)	2075
Bme1390I	CCNGG	6 cut(s)	38, 914, 1002, 1407, 1712, 2043
Bme18I	GGWCC	4 cut(s)	295, 379, 1055, 2333
BmeRI	GACNNNNNGTC	1 cut(s)	1606
BmeT110I	CYCGRG	1 cut(s)	731
BmgT120I	GGNCC	5 cut(s)	26, 295, 379, 1055, 2333
BmrFI	CCNGG	6 cut(s)	38, 914, 1002, 1407, 1712, 2043
BmsI	GCATC	7 cut(s)	469, 746, 815, 909, 960, 979, 2310
BoxI	GACNNNNGTC	2 cut(s)	866, 1706
BpmI	CTGGAG	4 cut(s)	37, 896, 1415, 2381
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	1 cut(s)	38
Bsa29I	ATCGAT	1 cut(s)	1098
BsaBI	GATNNNNATC	1 cut(s)	501
BsaHI	GRCGYC	3 cut(s)	112, 205, 1852
BsaJI	CCNNGG	6 cut(s)	36, 1170, 1372, 1456, 2075, 2214
BsaWI	WCCGGW	1 cut(s)	505
BsaXI	ACNNNNNCTCC	6 cut(s)	35, 65, 389, 419, 1545, 1575
Bsc4I	CCNNNNNNNGG	7 cut(s)	312, 357, 441, 738, 941, 1529, 1828
Bse118I	RCCGGY	1 cut(s)	269
Bse1I	ACTGG	5 cut(s)	987, 1027, 1432, 2251, 2427
Bse3DI	GCAATG	2 cut(s)	1680, 2193
Bse8I	GATNNNNATC	1 cut(s)	501
BseAI	TCCGGA	1 cut(s)	505
BseBI	CCWGG	5 cut(s)	914, 1002, 1407, 1712, 2043
BseCI	ATCGAT	1 cut(s)	1098
BseDI	CCNNGG	6 cut(s)	36, 1170, 1372, 1456, 2075, 2214
BseGI	GGATG	5 cut(s)	46, 194, 484, 690, 1915
BseJI	GATNNNNATC	1 cut(s)	501
BseLI	CCNNNNNNNGG	7 cut(s)	312, 357, 441, 738, 941, 1529, 1828
BseMI	GCAATG	2 cut(s)	1680, 2193
BseMII	CTCAG	1 cut(s)	1884
BseNI	ACTGG	5 cut(s)	987, 1027, 1432, 2251, 2427
BseRI	GAGGAG	4 cut(s)	1160, 2038, 2041, 2378
BseSI	GKGCMC	1 cut(s)	320
BseXI	GCAGC	7 cut(s)	104, 1413, 1975, 2058, 2061, 2343, 2400
BseYI	CCCAGC	1 cut(s)	1422
Bsh1236I	CGCG	3 cut(s)	224, 226, 251
BshFI	GGCC	5 cut(s)	5, 27, 158, 434, 1314
BshNI	GGYRCC	5 cut(s)	204, 218, 317, 1276, 1851
BshVI	ATCGAT	1 cut(s)	1098
BsiHKCI	CYCGRG	1 cut(s)	731
BsiSI	CCGG	4 cut(s)	38, 155, 270, 506
BslFI	GGGAC	4 cut(s)	19, 392, 1405, 2346
BslI	CCNNNNNNNGG	7 cut(s)	312, 357, 441, 738, 941, 1529, 1828
BsmAI	GTCTC	3 cut(s)	103, 1889, 2266
BsmBI	CGTCTC	2 cut(s)	103, 2266
BsmFI	GGGAC	4 cut(s)	19, 392, 1405, 2346
BsmI	GAATGC	3 cut(s)	1140, 1345, 2422
BsnI	GGCC	5 cut(s)	5, 27, 158, 434, 1314
BsoBI	CYCGRG	1 cut(s)	731
Bsp1286I	GDGCHC	1 cut(s)	320
Bsp13I	TCCGGA	1 cut(s)	505
Bsp1407I	TGTACA	1 cut(s)	1900
BspANI	GGCC	5 cut(s)	5, 27, 158, 434, 1314
BspCNI	CTCAG	1 cut(s)	1885
BspDI	ATCGAT	1 cut(s)	1098
BspEI	TCCGGA	1 cut(s)	505
BspFNI	CGCG	3 cut(s)	224, 226, 251
BspMAI	CTGCAG	1 cut(s)	1993
BspMI	ACCTGC	1 cut(s)	873
BspPI	GGATC	8 cut(s)	117, 497, 925, 1397, 1514, 1527, 1741, 2241
BspT107I	GGYRCC	5 cut(s)	204, 218, 317, 1276, 1851
BsrDI	GCAATG	2 cut(s)	1680, 2193
BsrFI	RCCGGY	1 cut(s)	269
BsrGI	TGTACA	1 cut(s)	1900
BsrI	ACTGG	5 cut(s)	987, 1027, 1432, 2251, 2427
BssAI	RCCGGY	1 cut(s)	269
BssECI	CCNNGG	6 cut(s)	36, 1170, 1372, 1456, 2075, 2214
BssNI	GRCGYC	3 cut(s)	112, 205, 1852
BssSI	CACGAG	2 cut(s)	1634, 2004
BssT1I	CCWWGG	2 cut(s)	1170, 2075
Bst2BI	CACGAG	2 cut(s)	1634, 2004
Bst2UI	CCWGG	5 cut(s)	914, 1002, 1407, 1712, 2043
Bst4CI	ACNGT	7 cut(s)	958, 1072, 1540, 1657, 1900, 2140, 2468
Bst6I	CTCTTC	5 cut(s)	82, 792, 831, 1182, 1471
BstACI	GRCGYC	3 cut(s)	112, 205, 1852
BstAPI	GCANNNNNTGC	1 cut(s)	1584
BstAUI	TGTACA	1 cut(s)	1900
BstC8I	GCNNGC	8 cut(s)	203, 271, 348, 1140, 1233, 1325, 1449, 2299
BstDEI	CTNAG	4 cut(s)	1558, 1893, 2102, 2411
BstDSI	CCRYGG	3 cut(s)	1372, 1456, 2214
BstENI	CCTNNNNNAGG	2 cut(s)	1527, 1826
BstF5I	GGATG	5 cut(s)	46, 194, 484, 690, 1915
BstFNI	CGCG	3 cut(s)	224, 226, 251
BstH2I	RGCGCY	2 cut(s)	208, 1855
BstHHI	GCGC	5 cut(s)	207, 226, 253, 1619, 1854
BstMAI	GTCTC	3 cut(s)	103, 1889, 2266
BstNI	CCWGG	5 cut(s)	914, 1002, 1407, 1712, 2043
BstNSI	RCATGY	1 cut(s)	1630
BstPAI	GACNNNNGTC	2 cut(s)	866, 1706
BstSCI	CCNGG	6 cut(s)	36, 912, 1000, 1405, 1710, 2041
BstSFI	CTRYAG	2 cut(s)	792, 1989
BstSLI	GKGCMC	1 cut(s)	320
BstUI	CGCG	3 cut(s)	224, 226, 251
BstV1I	GCAGC	7 cut(s)	104, 1413, 1975, 2058, 2061, 2343, 2400
BstX2I	RGATCY	5 cut(s)	930, 1268, 1519, 1733, 2233
BstXI	CCANNNNNNTGG	3 cut(s)	1273, 1287, 1331
BstYI	RGATCY	5 cut(s)	930, 1268, 1519, 1733, 2233
Bsu15I	ATCGAT	1 cut(s)	1098
BsuI	GTATCC	2 cut(s)	543, 1940
BsuRI	GGCC	5 cut(s)	5, 27, 158, 434, 1314
BsuTUI	ATCGAT	1 cut(s)	1098
BtgI	CCRYGG	3 cut(s)	1372, 1456, 2214
BtsCI	GGATG	5 cut(s)	46, 194, 484, 690, 1915
BtsIMutI	CAGTG	4 cut(s)	334, 1020, 2420, 2473
BveI	ACCTGC	1 cut(s)	873
Cac8I	GCNNGC	8 cut(s)	203, 271, 348, 1140, 1233, 1325, 1449, 2299
CfoI	GCGC	5 cut(s)	207, 226, 253, 1619, 1854
Cfr10I	RCCGGY	1 cut(s)	269
Cfr13I	GGNCC	5 cut(s)	26, 295, 379, 1055, 2333
ClaI	ATCGAT	1 cut(s)	1098
CseI	GACGC	3 cut(s)	98, 120, 257
CsiI	ACCWGGT	1 cut(s)	1000
Csp6I	GTAC	5 cut(s)	228, 424, 945, 1435, 1901
CspCI	CAANNNNNGTGG	2 cut(s)	860, 895
CviAII	CATG	7 cut(s)	286, 652, 829, 974, 1627, 2150, 2230
CviQI	GTAC	5 cut(s)	228, 424, 945, 1435, 1901
DdeI	CTNAG	4 cut(s)	1558, 1893, 2102, 2411
DinI	GGCGCC	2 cut(s)	206, 1853
DraIII	CACNNNGTG	1 cut(s)	1639
DriI	GACNNNNNGTC	1 cut(s)	1606
Eam1104I	CTCTTC	5 cut(s)	82, 792, 831, 1182, 1471
Eam1105I	GACNNNNNGTC	1 cut(s)	1606
EarI	CTCTTC	5 cut(s)	82, 792, 831, 1182, 1471
EciI	GGCGGA	1 cut(s)	1157
Eco130I	CCWWGG	2 cut(s)	1170, 2075
Eco147I	AGGCCT	1 cut(s)	1314
Eco47I	GGWCC	4 cut(s)	295, 379, 1055, 2333
Eco57I	CTGAAG	3 cut(s)	435, 957, 2390
Eco88I	CYCGRG	1 cut(s)	731
EcoNI	CCTNNNNNAGG	2 cut(s)	1527, 1826
EcoO109I	RGGNCCY	1 cut(s)	2333
EcoRI	GAATTC	2 cut(s)	391, 1165
EcoRII	CCWGG	5 cut(s)	912, 1000, 1405, 1710, 2041
EcoT14I	CCWWGG	2 cut(s)	1170, 2075
EcoT22I	ATGCAT	2 cut(s)	830, 975
EgeI	GGCGCC	2 cut(s)	206, 1853
EheI	GGCGCC	2 cut(s)	206, 1853
ErhI	CCWWGG	2 cut(s)	1170, 2075
Esp3I	CGTCTC	2 cut(s)	103, 2266
FaeI	CATG	7 cut(s)	289, 655, 832, 977, 1630, 2153, 2233
FalI	AAGNNNNNCTT	2 cut(s)	1302, 1334
FaqI	GGGAC	4 cut(s)	19, 392, 1405, 2346
FatI	CATG	7 cut(s)	285, 651, 828, 973, 1626, 2149, 2229
FauI	CCCGC	4 cut(s)	91, 170, 206, 2306
FokI	GGATG	5 cut(s)	53, 181, 491, 697, 1922
GlaI	GCGC	5 cut(s)	206, 225, 252, 1618, 1853
GsaI	CCCAGC	1 cut(s)	1426
GsuI	CTGGAG	4 cut(s)	37, 896, 1415, 2381
HaeII	RGCGCY	2 cut(s)	208, 1855
HaeIII	GGCC	5 cut(s)	5, 27, 158, 434, 1314
HapII	CCGG	4 cut(s)	38, 155, 270, 506
HgaI	GACGC	3 cut(s)	98, 120, 257
HhaI	GCGC	5 cut(s)	207, 226, 253, 1619, 1854
Hin1I	GRCGYC	3 cut(s)	112, 205, 1852
Hin1II	CATG	7 cut(s)	289, 655, 832, 977, 1630, 2153, 2233
Hin6I	GCGC	5 cut(s)	205, 224, 251, 1617, 1852
HinP1I	GCGC	5 cut(s)	205, 224, 251, 1617, 1852
HincII	GTYRAC	2 cut(s)	645, 1932
HindII	GTYRAC	2 cut(s)	645, 1932
HindIII	AAGCTT	1 cut(s)	1445
HpaII	CCGG	4 cut(s)	38, 155, 270, 506
HphI	GGTGA	7 cut(s)	1016, 1412, 1651, 1766, 1958, 2071, 2390
Hpy166II	GTNNAC	5 cut(s)	645, 871, 888, 947, 1932
Hpy188III	TCNNGA	9 cut(s)	377, 439, 449, 506, 1087, 1131, 1523, 1892, 2177
Hpy8I	GTNNAC	5 cut(s)	645, 871, 888, 947, 1932
Hpy99I	CGWCG	1 cut(s)	92
HpyCH4III	ACNGT	7 cut(s)	958, 1072, 1540, 1657, 1900, 2140, 2468
HpyCH4IV	ACGT	3 cut(s)	641, 1928, 2098
HpyF3I	CTNAG	4 cut(s)	1558, 1893, 2102, 2411
HpySE526I	ACGT	3 cut(s)	641, 1928, 2098
Hsp92I	GRCGYC	3 cut(s)	112, 205, 1852
Hsp92II	CATG	7 cut(s)	289, 655, 832, 977, 1630, 2153, 2233
HspAI	GCGC	5 cut(s)	205, 224, 251, 1617, 1852
KasI	GGCGCC	2 cut(s)	204, 1851
KflI	GGGWCCC	1 cut(s)	2333
Kpn2I	TCCGGA	1 cut(s)	505
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
LmnI	GCTCC	7 cut(s)	915, 1147, 1434, 1456, 1553, 1623, 2365
Lsp1109I	GCAGC	7 cut(s)	104, 1413, 1975, 2058, 2061, 2343, 2400
LweI	GCATC	7 cut(s)	469, 746, 815, 909, 960, 979, 2310
MabI	ACCWGGT	1 cut(s)	1000
MaeII	ACGT	3 cut(s)	641, 1928, 2098
MaeIII	GTNAC	3 cut(s)	1004, 1018, 1629
MboII	GAAGA	9 cut(s)	69, 379, 779, 848, 1199, 1382, 1488, 2329, 2383
MfeI	CAATTG	2 cut(s)	1220, 2223
MflI	RGATCY	5 cut(s)	930, 1268, 1519, 1733, 2233
MhlI	GDGCHC	1 cut(s)	320
Mly113I	GGCGCC	2 cut(s)	205, 1852
MlyI	GAGTC	4 cut(s)	5, 38, 613, 1996
MmeI	TCCRAC	5 cut(s)	33, 804, 1033, 1156, 1924
Mph1103I	ATGCAT	2 cut(s)	830, 975
MroI	TCCGGA	1 cut(s)	505
MroNI	GCCGGC	1 cut(s)	269
MseI	TTAA	6 cut(s)	333, 342, 1383, 1692, 1817, 2241
MslI	CAYNNNNRTG	1 cut(s)	2309
MspA1I	CMGCKG	1 cut(s)	1426
MspI	CCGG	4 cut(s)	38, 155, 270, 506
MspR9I	CCNGG	6 cut(s)	38, 914, 1002, 1407, 1712, 2043
MunI	CAATTG	2 cut(s)	1220, 2223
Mva1269I	GAATGC	3 cut(s)	1140, 1345, 2422
MvaI	CCWGG	5 cut(s)	914, 1002, 1407, 1712, 2043
MvnI	CGCG	3 cut(s)	224, 226, 251
NaeI	GCCGGC	1 cut(s)	271
NarI	GGCGCC	2 cut(s)	205, 1852
NciI	CCSGG	1 cut(s)	38
NgoMIV	GCCGGC	1 cut(s)	269
NlaIII	CATG	7 cut(s)	289, 655, 832, 977, 1630, 2153, 2233
NmuCI	GTSAC	2 cut(s)	1004, 1018
NsiI	ATGCAT	2 cut(s)	830, 975
NspI	RCATGY	1 cut(s)	1630
PceI	AGGCCT	1 cut(s)	1314
PcsI	WCGNNNNNNNCGW	3 cut(s)	118, 174, 288
PctI	GAATGC	3 cut(s)	1140, 1345, 2422
PdiI	GCCGGC	1 cut(s)	271
PfeI	GAWTC	7 cut(s)	445, 464, 1181, 1677, 1723, 1888, 2122
PflFI	GACNNNGTC	2 cut(s)	1301, 2468
PfoI	TCCNGGA	2 cut(s)	912, 1405
PleI	GAGTC	4 cut(s)	5, 38, 613, 1996
PluTI	GGCGCC	2 cut(s)	208, 1855
PpsI	GAGTC	4 cut(s)	5, 38, 613, 1996
PpuMI	RGGWCCY	1 cut(s)	2333
PshAI	GACNNNNGTC	2 cut(s)	866, 1706
PshBI	ATTAAT	2 cut(s)	1383, 2241
Psp5II	RGGWCCY	1 cut(s)	2333
Psp6I	CCWGG	5 cut(s)	912, 1000, 1405, 1710, 2041
PspFI	CCCAGC	1 cut(s)	1422
PspGI	CCWGG	5 cut(s)	912, 1000, 1405, 1710, 2041
PspPI	GGNCC	5 cut(s)	26, 295, 379, 1055, 2333
PspPPI	RGGWCCY	1 cut(s)	2333
PstI	CTGCAG	1 cut(s)	1993
PsuI	RGATCY	5 cut(s)	930, 1268, 1519, 1733, 2233
PsyI	GACNNNGTC	2 cut(s)	1301, 2468
PvuII	CAGCTG	1 cut(s)	1426
RsaI	GTAC	5 cut(s)	229, 425, 946, 1436, 1902
RsaNI	GTAC	5 cut(s)	228, 424, 945, 1435, 1901
RseI	CAYNNNNRTG	1 cut(s)	2309
SaqAI	TTAA	6 cut(s)	333, 342, 1383, 1692, 1817, 2241
Sau96I	GGNCC	5 cut(s)	26, 295, 379, 1055, 2333
SchI	GAGTC	4 cut(s)	5, 38, 613, 1996
ScrFI	CCNGG	6 cut(s)	38, 914, 1002, 1407, 1712, 2043
SduI	GDGCHC	1 cut(s)	320
SexAI	ACCWGGT	1 cut(s)	1000
SfaNI	GCATC	7 cut(s)	469, 746, 815, 909, 960, 979, 2310
SfcI	CTRYAG	2 cut(s)	792, 1989
SfoI	GGCGCC	2 cut(s)	206, 1853
SinI	GGWCC	4 cut(s)	295, 379, 1055, 2333
SmiMI	CAYNNNNRTG	1 cut(s)	2309
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
SpeI	ACTAGT	1 cut(s)	1469
SseBI	AGGCCT	1 cut(s)	1314
SspDI	GGCGCC	2 cut(s)	204, 1851
SspI	AATATT	2 cut(s)	750, 1387
StuI	AGGCCT	1 cut(s)	1314
StyD4I	CCNGG	6 cut(s)	36, 912, 1000, 1405, 1710, 2041
StyI	CCWWGG	2 cut(s)	1170, 2075
TaaI	ACNGT	7 cut(s)	958, 1072, 1540, 1657, 1900, 2140, 2468
TaiI	ACGT	3 cut(s)	644, 1931, 2101
TaqI	TCGA	8 cut(s)	471, 484, 558, 692, 712, 1098, 1803, 1954
TatI	WGTACW	3 cut(s)	423, 1434, 1900
TauI	GCSGC	6 cut(s)	98, 117, 120, 173, 210, 256
TfiI	GAWTC	7 cut(s)	445, 464, 1181, 1677, 1723, 1888, 2122
Tru1I	TTAA	6 cut(s)	333, 342, 1383, 1692, 1817, 2241
Tru9I	TTAA	6 cut(s)	333, 342, 1383, 1692, 1817, 2241
TscAI	CASTG	4 cut(s)	334, 1027, 2427, 2473
TseFI	GTSAC	2 cut(s)	1004, 1018
TseI	GCWGC	7 cut(s)	92, 1426, 1988, 2046, 2049, 2356, 2388
Tsp45I	GTSAC	2 cut(s)	1004, 1018
TspDTI	ATGAA	5 cut(s)	828, 845, 1218, 1608, 1998
TspGWI	ACGGA	2 cut(s)	1169, 1361
TspRI	CASTG	4 cut(s)	334, 1027, 2427, 2473
Tth111I	GACNNNGTC	2 cut(s)	1301, 2468
VpaK11BI	GGWCC	4 cut(s)	295, 379, 1055, 2333
VspI	ATTAAT	2 cut(s)	1383, 2241
XagI	CCTNNNNNAGG	2 cut(s)	1527, 1826
XapI	RAATTY	7 cut(s)	391, 853, 1165, 1595, 2035, 2250, 2394
XbaI	TCTAGA	1 cut(s)	2176
XceI	RCATGY	1 cut(s)	1630
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1331
XmaJI	CCTAGG	1 cut(s)	2075
Zsp2I	ATGCAT	2 cut(s)	830, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.