Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0021142.1

Orthogroup ID

OG0008419

Physical Location & Seq

Genomic Coordinates Reverse (-)

3262 .. 8677

Gene Structure 5416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0021142.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

atggcttccgactcttctgcacccaatttcaacaacgggccttcctctcccgatgactccttctccagcccaatcggcaacaccttctcttctccggccgacgccgccgccgccgctcgccagagaacccgccgccgatccaccacacccaccgcattcgcaacccctcccgcctcccgctcccgcttcgccgcctccgaaacaaccccgaccccttcatctcgcacgcgccgccccaacggcaccgcacgcaccccgtcttctaccgatgatggccccccctcttcggaaggcggcgacagctacggcatggacgaggaccgccccaccttcgtctggggcaccaatatcagcgtcaatgatgttaagctcgccattattaggtttttgaagaattttcgggaccaatcgcagaactccgagagcgattatcttaccgaagggaaatacattgaggccatcaagagaattctggaaatggaaggcgattccctggatgtggatgcccgcaatgtgtttgattatgattccgatttgtatgctaagatggtcaggtacccacttgaggttcttgctattttcgacattgttttgatggaattgttgcctgtcataaaccccttgttcgagaagcacattcagactcgcattttcaatctcaaaacatcaacatccatgagaaatctgaacccgtctgatattgagaggatggtttcaataaaggggatgattattcggtccagttcaataatacctgagataagggaagcaatatttaggtgcctcgtgtgtggttactactctgaccctcttcctgtagaaaaagggaaaataaatgaacctacaagatgcatgaaggaagagtgtcaagccaagaattctatgacactagttcacaaccgttgcaggtttactgataaacagattgtgaggctccaagagacgcctgatgaaatccctgaaggagggacaccgcatactgtgagtttgttgatgcatgacaaactggttgatgcgggaaaaccaggtgacagagttgaggttactgggatatatcgggctatgagcgtaagagttggacctacacagagaactgtaaaatcattattcaagacttatattgattgtctgcatataaaaaagtctgacaagtcaagaatgctggcggaggagcagacggaagttgagaattccttgggtggaaattcagatgagattctttttgatgaaaagaaggtggaacaattgaaagagctggcaaaacagcctgatatatatgatcgcctaaccagatctttggcaccaaacatctgggagttagatgatgtcaagaaaggccttctttgccagctttttggtgggaatgctttgaagttgccatctggtgcaaggttccgtggggatattaatattcttcttgttggtgatcctggaaccagcaagtcccagctgctccagtacatacacaagcttgctccccgtggcatatacactagtggaagagggagttctgctgttggtttgactgcttatgttgcaaaagatcctgaaacaggggaaactgttttagagagtggagccttagttttgagtgatcgaggcatttgttgcattgatgaatttgacaaaatgtctgacagtgcaaggagcatgttacacgaggtgatggagcagcaaactgtgtcaatagcaaaggcgggaatcattgcttcccttaatgctaggacatcagtcctggcttgtgcaaatccaagtggatctcgctataatcctcgcttgtcagtaattgacaacatacaccttcctcctaccttattatccaggtttgatctgatctacttaatccttgacaaggctgatgagcagacagacaggcgccttgcaaagcatattgttgccttgcactttgagaatcctgagactgtacagcaggatgttttagaccttgccacgttgactgcttatgtgggatatgcccgaaagcatattcacccacaattatctgatgaagctgcagaggagttgactcgtggctatgtagagttgaggaggagaggaaattttccgggcagcagcaaaaaggtgataacagcaactcctaggcaaatcgagagtttgatacgtcttagtgaagctctagctcggattcgtttttcagaatcggttgaaaagcatgatgtaatggaggcatttcggcttcttgaagttgcaatgcaacaatcagcaacagatcactccactggaacgatcgacatggatcttattaatactggaatttcggcaagtgaaagaatgagacgggagaatctagtgtcatcagctcgcaacttaattatggagaagatgcaacttgggggaccctcaatgcgtttgttagagctgctggaggatctgaagaagcagagttctggcagtgaaattcacctcaacgatcttaggaatgcaattgctacgcttgcaagtgagggatttgtcgctgttcatggagacagtgtcaaaagagtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0000785 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

835

Amino Acids

92.62

Weight (kDa)

6.14

Isoelectric Point (pI)

50.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16440
fragaria_vesca	FvH4_2g09990
malus_domestica	MD00G1085600.v1.1 MD10G1066500.v1.1
prunus_persica	Prupe.8G088400_v2.0.a1
pyrus_communis	pycom05g04970 pycom05g04980 pycom10g05200
rosa_chinensis	RchiOBHm_Chr6g0266881 RchiOBHm_Chr6g0266891
rosa_laevigata	RLG00000014063 RLG00000014064 RLG00000014065
rosa_multiflora	Rmu_co8507775.1_g000001 Rmu_sc0021142.1_g000001 Rmu_sc0036177.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201330
rosa_rugosa	Rorug06G0027900
rosa_samantha	Rh6AG149000 Rh6BG150000 Rh6CG144900 Rh6DG134200
rosa_wichuraiana	Rw6G012890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	897
Acc65I	GGTACC	1 cut(s)	555
AccB1I	GGYRCC	6 cut(s)	242, 341, 555, 780, 1300, 1875
AccBSI	CCGCTC	2 cut(s)	116, 180
AccII	CGCG	1 cut(s)	229
AclWI	GGATC	6 cut(s)	132, 1421, 1538, 1765, 2265, 2397
AcoI	YGGCCR	1 cut(s)	96
AcsI	RAATTY	9 cut(s)	394, 468, 877, 1189, 1204, 1619, 2059, 2274, 2418
AcuI	CTGAAG	2 cut(s)	981, 2414
AcyI	GRCGYC	3 cut(s)	102, 944, 1876
AdeI	CACNNNGTG	1 cut(s)	1663
AfaI	GTAC	3 cut(s)	557, 1460, 1926
AfiI	CCNNNNNNNGG	8 cut(s)	286, 336, 381, 499, 565, 965, 1553, 1852
AhdI	GACNNNNNGTC	1 cut(s)	1630
AhlI	ACTAGT	2 cut(s)	889, 1493
AjnI	CCWGG	5 cut(s)	492, 1024, 1429, 1734, 1820
Alw26I	GTCTC	4 cut(s)	935, 1913, 2290, 2481
AlwI	GGATC	6 cut(s)	132, 1421, 1538, 1765, 2265, 2397
AoxI	GGCC	5 cut(s)	38, 96, 274, 456, 1336
ApeKI	GCWGC	6 cut(s)	1450, 1672, 2012, 2070, 2073, 2380
ApoI	RAATTY	9 cut(s)	394, 468, 877, 1189, 1204, 1619, 2059, 2274, 2418
AseI	ATTAAT	2 cut(s)	1407, 2265
Asp718I	GGTACC	1 cut(s)	555
AspA2I	CCTAGG	1 cut(s)	2099
AspLEI	GCGC	2 cut(s)	231, 1878
AspS9I	GGNCC	7 cut(s)	38, 275, 319, 403, 738, 1079, 2357
AsuC2I	CCSGG	1 cut(s)	2067
AsuHPI	GGTGA	6 cut(s)	1040, 1436, 1675, 1982, 2095, 2414
AvaII	GGWCC	5 cut(s)	319, 403, 738, 1079, 2357
AvrII	CCTAGG	1 cut(s)	2099
BaeGI	GKGCMC	1 cut(s)	344
BanI	GGYRCC	6 cut(s)	242, 341, 555, 780, 1300, 1875
BauI	CACGAG	3 cut(s)	785, 1658, 2028
BbsI	GAAGAC	1 cut(s)	252
BbvI	GCAGC	6 cut(s)	1437, 1684, 1999, 2082, 2085, 2367
BccI	CCATC	7 cut(s)	266, 467, 541, 589, 703, 1387, 1660
BceAI	ACGGC	2 cut(s)	256, 322
BcgI	CGANNNNNNTGC	3 cut(s)	33, 521, 555
BciT130I	CCWGG	5 cut(s)	494, 1026, 1431, 1736, 1822
BcnI	CCSGG	1 cut(s)	2067
BcoDI	GTCTC	4 cut(s)	935, 1913, 2290, 2481
BcuI	ACTAGT	2 cut(s)	889, 1493
BfaI	CTAG	6 cut(s)	890, 1494, 1722, 2100, 2138, 2309
BfmI	CTRYAG	2 cut(s)	816, 2013
BfoI	RGCGCY	1 cut(s)	1879
BfuAI	ACCTGC	1 cut(s)	897
BglI	GCCNNNNNGGC	2 cut(s)	75, 240
BglII	AGATCT	1 cut(s)	1292
BlnI	CCTAGG	1 cut(s)	2099
Bme1390I	CCNGG	6 cut(s)	494, 1026, 1431, 1736, 1822, 2067
Bme18I	GGWCC	5 cut(s)	319, 403, 738, 1079, 2357
BmeRI	GACNNNNNGTC	1 cut(s)	1630
BmgT120I	GGNCC	7 cut(s)	38, 275, 319, 403, 738, 1079, 2357
BmrFI	CCNGG	6 cut(s)	494, 1026, 1431, 1736, 1822, 2067
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	5 cut(s)	493, 839, 984, 1003, 2334
BmuI	ACTGGG	1 cut(s)	1056
BoxI	GACNNNNGTC	1 cut(s)	1730
BpiI	GAAGAC	1 cut(s)	252
BpmI	CTGGAG	3 cut(s)	49, 1439, 2405
BpuEI	CTTGAG	1 cut(s)	584
BpuMI	CCSGG	1 cut(s)	2067
BsaHI	GRCGYC	3 cut(s)	102, 944, 1876
BsaJI	CCNNGG	5 cut(s)	492, 1194, 1396, 1480, 2099
BsaXI	ACNNNNNCTCC	8 cut(s)	47, 77, 1569, 1599, 2080, 2110, 2478, 2508
Bsc4I	CCNNNNNNNGG	8 cut(s)	286, 336, 381, 499, 565, 965, 1553, 1852
Bse1I	ACTGG	6 cut(s)	741, 1011, 1051, 1456, 2245, 2275
Bse3DI	GCAATG	3 cut(s)	517, 1704, 2217
BseBI	CCWGG	5 cut(s)	494, 1026, 1431, 1736, 1822
BseDI	CCNNGG	5 cut(s)	492, 1194, 1396, 1480, 2099
BseGI	GGATG	6 cut(s)	502, 508, 671, 714, 732, 1939
BseLI	CCNNNNNNNGG	8 cut(s)	286, 336, 381, 499, 565, 965, 1553, 1852
BseMI	GCAATG	3 cut(s)	517, 1704, 2217
BseMII	CTCAG	2 cut(s)	747, 1908
BseNI	ACTGG	6 cut(s)	741, 1011, 1051, 1456, 2245, 2275
BseRI	GAGGAG	4 cut(s)	1184, 2033, 2062, 2065
BseSI	GKGCMC	1 cut(s)	344
BseX3I	CGGCCG	1 cut(s)	96
BseXI	GCAGC	6 cut(s)	1437, 1684, 1999, 2082, 2085, 2367
BseYI	CCCAGC	1 cut(s)	1446
Bsh1236I	CGCG	1 cut(s)	229
Bsh1285I	CGRYCG	2 cut(s)	99, 2250
BshFI	GGCC	5 cut(s)	40, 98, 276, 458, 1338
BshNI	GGYRCC	6 cut(s)	242, 341, 555, 780, 1300, 1875
BsiEI	CGRYCG	2 cut(s)	99, 2250
BsiSI	CCGG	2 cut(s)	95, 2066
BslFI	GGGAC	4 cut(s)	416, 982, 1429, 2370
BslI	CCNNNNNNNGG	8 cut(s)	286, 336, 381, 499, 565, 965, 1553, 1852
BsmAI	GTCTC	4 cut(s)	935, 1913, 2290, 2481
BsmBI	CGTCTC	2 cut(s)	935, 2290
BsmFI	GGGAC	4 cut(s)	416, 982, 1429, 2370
BsmI	GAATGC	4 cut(s)	155, 1164, 1369, 2446
BsnI	GGCC	5 cut(s)	40, 98, 276, 458, 1338
Bsp1286I	GDGCHC	1 cut(s)	344
Bsp1407I	TGTACA	1 cut(s)	1924
BspANI	GGCC	5 cut(s)	40, 98, 276, 458, 1338
BspCNI	CTCAG	2 cut(s)	748, 1909
BspFNI	CGCG	1 cut(s)	229
BspMAI	CTGCAG	1 cut(s)	2017
BspMI	ACCTGC	1 cut(s)	897
BspPI	GGATC	6 cut(s)	132, 1421, 1538, 1765, 2265, 2397
BspT107I	GGYRCC	6 cut(s)	242, 341, 555, 780, 1300, 1875
BsrBI	CCGCTC	2 cut(s)	116, 180
BsrDI	GCAATG	3 cut(s)	517, 1704, 2217
BsrGI	TGTACA	1 cut(s)	1924
BsrI	ACTGG	6 cut(s)	741, 1011, 1051, 1456, 2245, 2275
BssECI	CCNNGG	5 cut(s)	492, 1194, 1396, 1480, 2099
BssNI	GRCGYC	3 cut(s)	102, 944, 1876
BssSI	CACGAG	3 cut(s)	785, 1658, 2028
BssT1I	CCWWGG	2 cut(s)	1194, 2099
Bst2BI	CACGAG	3 cut(s)	785, 1658, 2028
Bst2UI	CCWGG	5 cut(s)	494, 1026, 1431, 1736, 1822
Bst4CI	ACNGT	8 cut(s)	902, 982, 1096, 1564, 1640, 1681, 1924, 2492
Bst6I	CTCTTC	6 cut(s)	19, 94, 289, 816, 855, 1495
BstACI	GRCGYC	3 cut(s)	102, 944, 1876
BstAPI	GCANNNNNTGC	1 cut(s)	1608
BstAUI	TGTACA	1 cut(s)	1924
BstDEI	CTNAG	6 cut(s)	543, 756, 1582, 1917, 2126, 2435
BstDSI	CCRYGG	2 cut(s)	1396, 1480
BstENI	CCTNNNNNAGG	3 cut(s)	963, 1551, 1850
BstF5I	GGATG	6 cut(s)	502, 508, 671, 714, 732, 1939
BstFNI	CGCG	1 cut(s)	229
BstH2I	RGCGCY	1 cut(s)	1879
BstHHI	GCGC	2 cut(s)	231, 1878
BstMAI	GTCTC	4 cut(s)	935, 1913, 2290, 2481
BstMCI	CGRYCG	2 cut(s)	99, 2250
BstNI	CCWGG	5 cut(s)	494, 1026, 1431, 1736, 1822
BstNSI	RCATGY	1 cut(s)	1654
BstPAI	GACNNNNGTC	1 cut(s)	1730
BstSCI	CCNGG	6 cut(s)	492, 1024, 1429, 1734, 1820, 2065
BstSFI	CTRYAG	2 cut(s)	816, 2013
BstSLI	GKGCMC	1 cut(s)	344
BstUI	CGCG	1 cut(s)	229
BstV1I	GCAGC	6 cut(s)	1437, 1684, 1999, 2082, 2085, 2367
BstV2I	GAAGAC	1 cut(s)	252
BstX2I	RGATCY	5 cut(s)	1292, 1543, 1757, 2257, 2389
BstXI	CCANNNNNNTGG	3 cut(s)	1297, 1311, 1355
BstYI	RGATCY	5 cut(s)	1292, 1543, 1757, 2257, 2389
BstZI	CGGCCG	1 cut(s)	96
BsuRI	GGCC	5 cut(s)	40, 98, 276, 458, 1338
BtgI	CCRYGG	2 cut(s)	1396, 1480
BtsCI	GGATG	6 cut(s)	502, 508, 671, 714, 732, 1939
BtsI	GCAGTG	1 cut(s)	2419
BtsIMutI	CAGTG	4 cut(s)	1645, 2238, 2419, 2497
BveI	ACCTGC	1 cut(s)	897
CfoI	GCGC	2 cut(s)	231, 1878
Cfr13I	GGNCC	7 cut(s)	38, 275, 319, 403, 738, 1079, 2357
CseI	GACGC	3 cut(s)	110, 343, 952
CsiI	ACCWGGT	1 cut(s)	1024
Csp6I	GTAC	3 cut(s)	556, 1459, 1925
CviAII	CATG	8 cut(s)	310, 676, 853, 998, 1651, 2174, 2254, 2483
CviQI	GTAC	3 cut(s)	556, 1459, 1925
DdeI	CTNAG	6 cut(s)	543, 756, 1582, 1917, 2126, 2435
DinI	GGCGCC	1 cut(s)	1877
DraIII	CACNNNGTG	1 cut(s)	1663
DriI	GACNNNNNGTC	1 cut(s)	1630
EaeI	YGGCCR	1 cut(s)	96
EagI	CGGCCG	1 cut(s)	96
Eam1104I	CTCTTC	6 cut(s)	19, 94, 289, 816, 855, 1495
Eam1105I	GACNNNNNGTC	1 cut(s)	1630
EarI	CTCTTC	6 cut(s)	19, 94, 289, 816, 855, 1495
EciI	GGCGGA	1 cut(s)	1181
EclXI	CGGCCG	1 cut(s)	96
Eco130I	CCWWGG	2 cut(s)	1194, 2099
Eco147I	AGGCCT	1 cut(s)	1338
Eco47I	GGWCC	5 cut(s)	319, 403, 738, 1079, 2357
Eco52I	CGGCCG	1 cut(s)	96
Eco57I	CTGAAG	2 cut(s)	981, 2414
EcoNI	CCTNNNNNAGG	3 cut(s)	963, 1551, 1850
EcoO109I	RGGNCCY	1 cut(s)	2357
EcoRI	GAATTC	3 cut(s)	468, 877, 1189
EcoRII	CCWGG	5 cut(s)	492, 1024, 1429, 1734, 1820
EcoT14I	CCWWGG	2 cut(s)	1194, 2099
EcoT22I	ATGCAT	2 cut(s)	854, 999
EgeI	GGCGCC	1 cut(s)	1877
EheI	GGCGCC	1 cut(s)	1877
ErhI	CCWWGG	2 cut(s)	1194, 2099
Esp3I	CGTCTC	2 cut(s)	935, 2290
FaeI	CATG	8 cut(s)	313, 679, 856, 1001, 1654, 2177, 2257, 2486
FalI	AAGNNNNNCTT	2 cut(s)	1326, 1358
FaqI	GGGAC	4 cut(s)	416, 982, 1429, 2370
FatI	CATG	8 cut(s)	309, 675, 852, 997, 1650, 2173, 2253, 2482
FauI	CCCGC	7 cut(s)	137, 178, 185, 191, 515, 1009, 1690
FokI	GGATG	6 cut(s)	509, 515, 658, 721, 739, 1946
FspBI	CTAG	6 cut(s)	890, 1494, 1722, 2100, 2138, 2309
GlaI	GCGC	2 cut(s)	230, 1877
GsaI	CCCAGC	1 cut(s)	1450
GsuI	CTGGAG	3 cut(s)	49, 1439, 2405
HaeII	RGCGCY	1 cut(s)	1879
HaeIII	GGCC	5 cut(s)	40, 98, 276, 458, 1338
HapII	CCGG	2 cut(s)	95, 2066
HgaI	GACGC	3 cut(s)	110, 343, 952
HhaI	GCGC	2 cut(s)	231, 1878
Hin1I	GRCGYC	3 cut(s)	102, 944, 1876
Hin1II	CATG	8 cut(s)	313, 679, 856, 1001, 1654, 2177, 2257, 2486
Hin6I	GCGC	2 cut(s)	229, 1876
HinP1I	GCGC	2 cut(s)	229, 1876
HincII	GTYRAC	2 cut(s)	1956, 2025
HindII	GTYRAC	2 cut(s)	1956, 2025
HindIII	AAGCTT	1 cut(s)	1469
HpaII	CCGG	2 cut(s)	95, 2066
HphI	GGTGA	6 cut(s)	1040, 1436, 1675, 1982, 2095, 2414
Hpy166II	GTNNAC	4 cut(s)	895, 912, 1956, 2025
Hpy8I	GTNNAC	4 cut(s)	895, 912, 1956, 2025
Hpy99I	CGWCG	1 cut(s)	104
HpyCH4III	ACNGT	8 cut(s)	902, 982, 1096, 1564, 1640, 1681, 1924, 2492
HpyCH4IV	ACGT	2 cut(s)	1952, 2122
HpyF3I	CTNAG	6 cut(s)	543, 756, 1582, 1917, 2126, 2435
HpySE526I	ACGT	2 cut(s)	1952, 2122
Hsp92I	GRCGYC	3 cut(s)	102, 944, 1876
Hsp92II	CATG	8 cut(s)	313, 679, 856, 1001, 1654, 2177, 2257, 2486
HspAI	GCGC	2 cut(s)	229, 1876
KasI	GGCGCC	1 cut(s)	1875
KflI	GGGWCCC	1 cut(s)	2357
KpnI	GGTACC	1 cut(s)	559
LmnI	GCTCC	8 cut(s)	185, 939, 1171, 1458, 1480, 1577, 1647, 1669
Lsp1109I	GCAGC	6 cut(s)	1437, 1684, 1999, 2082, 2085, 2367
LweI	GCATC	5 cut(s)	493, 839, 984, 1003, 2334
MabI	ACCWGGT	1 cut(s)	1024
MaeI	CTAG	6 cut(s)	890, 1494, 1722, 2100, 2138, 2309
MaeII	ACGT	2 cut(s)	1952, 2122
MaeIII	GTNAC	4 cut(s)	794, 1028, 1042, 1653
MbiI	CCGCTC	2 cut(s)	116, 180
MfeI	CAATTG	2 cut(s)	1244, 2445
MflI	RGATCY	5 cut(s)	1292, 1543, 1757, 2257, 2389
MhlI	GDGCHC	1 cut(s)	344
Mly113I	GGCGCC	1 cut(s)	1876
MlyI	GAGTC	4 cut(s)	5, 50, 637, 2020
MmeI	TCCRAC	2 cut(s)	33, 1057
Mph1103I	ATGCAT	2 cut(s)	854, 999
MseI	TTAA	6 cut(s)	366, 1407, 1716, 1841, 2265, 2330
MspA1I	CMGCKG	1 cut(s)	1450
MspI	CCGG	2 cut(s)	95, 2066
MspR9I	CCNGG	6 cut(s)	494, 1026, 1431, 1736, 1822, 2067
MunI	CAATTG	2 cut(s)	1244, 2445
Mva1269I	GAATGC	4 cut(s)	155, 1164, 1369, 2446
MvaI	CCWGG	5 cut(s)	494, 1026, 1431, 1736, 1822
MvnI	CGCG	1 cut(s)	229
NarI	GGCGCC	1 cut(s)	1876
NciI	CCSGG	1 cut(s)	2067
NlaIII	CATG	8 cut(s)	313, 679, 856, 1001, 1654, 2177, 2257, 2486
NmuCI	GTSAC	1 cut(s)	1028
NsiI	ATGCAT	2 cut(s)	854, 999
NspI	RCATGY	1 cut(s)	1654
PceI	AGGCCT	1 cut(s)	1338
PcsI	WCGNNNNNNNCGW	2 cut(s)	195, 312
PctI	GAATGC	4 cut(s)	155, 1164, 1369, 2446
PfeI	GAWTC	8 cut(s)	488, 527, 1216, 1701, 1912, 2146, 2159, 2305
PflFI	GACNNNGTC	1 cut(s)	2492
PfoI	TCCNGGA	1 cut(s)	1429
Ple19I	CGATCG	1 cut(s)	2250
PleI	GAGTC	4 cut(s)	5, 50, 637, 2020
PluTI	GGCGCC	1 cut(s)	1879
PpsI	GAGTC	4 cut(s)	5, 50, 637, 2020
PpuMI	RGGWCCY	1 cut(s)	2357
PshAI	GACNNNNGTC	1 cut(s)	1730
PshBI	ATTAAT	2 cut(s)	1407, 2265
Psp5II	RGGWCCY	1 cut(s)	2357
Psp6I	CCWGG	5 cut(s)	492, 1024, 1429, 1734, 1820
PspFI	CCCAGC	1 cut(s)	1446
PspGI	CCWGG	5 cut(s)	492, 1024, 1429, 1734, 1820
PspPI	GGNCC	7 cut(s)	38, 275, 319, 403, 738, 1079, 2357
PspPPI	RGGWCCY	1 cut(s)	2357
PstI	CTGCAG	1 cut(s)	2017
PsuI	RGATCY	5 cut(s)	1292, 1543, 1757, 2257, 2389
PsyI	GACNNNGTC	1 cut(s)	2492
PvuI	CGATCG	1 cut(s)	2250
PvuII	CAGCTG	1 cut(s)	1450
RsaI	GTAC	3 cut(s)	557, 1460, 1926
RsaNI	GTAC	3 cut(s)	556, 1459, 1925
SaqAI	TTAA	6 cut(s)	366, 1407, 1716, 1841, 2265, 2330
Sau96I	GGNCC	7 cut(s)	38, 275, 319, 403, 738, 1079, 2357
SchI	GAGTC	4 cut(s)	5, 50, 637, 2020
ScrFI	CCNGG	6 cut(s)	494, 1026, 1431, 1736, 1822, 2067
SduI	GDGCHC	1 cut(s)	344
SexAI	ACCWGGT	1 cut(s)	1024
SfaNI	GCATC	5 cut(s)	493, 839, 984, 1003, 2334
SfcI	CTRYAG	2 cut(s)	816, 2013
SfoI	GGCGCC	1 cut(s)	1877
SinI	GGWCC	5 cut(s)	319, 403, 738, 1079, 2357
SmlI	CTYRAG	1 cut(s)	563
SmoI	CTYRAG	1 cut(s)	563
SpeI	ACTAGT	2 cut(s)	889, 1493
SseBI	AGGCCT	1 cut(s)	1338
SspDI	GGCGCC	1 cut(s)	1875
SspI	AATATT	2 cut(s)	774, 1411
SspMI	CTAG	6 cut(s)	890, 1494, 1722, 2100, 2138, 2309
StuI	AGGCCT	1 cut(s)	1338
StyD4I	CCNGG	6 cut(s)	492, 1024, 1429, 1734, 1820, 2065
StyI	CCWWGG	2 cut(s)	1194, 2099
TaaI	ACNGT	8 cut(s)	902, 982, 1096, 1564, 1640, 1681, 1924, 2492
TaiI	ACGT	2 cut(s)	1955, 2125
TaqI	TCGA	5 cut(s)	582, 627, 1597, 2109, 2250
TaqII	GACCGA	1 cut(s)	726
TatI	WGTACW	2 cut(s)	1458, 1924
TauI	GCSGC	8 cut(s)	107, 110, 113, 116, 135, 194, 234, 297
TfiI	GAWTC	8 cut(s)	488, 527, 1216, 1701, 1912, 2146, 2159, 2305
Tru1I	TTAA	6 cut(s)	366, 1407, 1716, 1841, 2265, 2330
Tru9I	TTAA	6 cut(s)	366, 1407, 1716, 1841, 2265, 2330
TscAI	CASTG	4 cut(s)	1645, 2245, 2419, 2497
TseFI	GTSAC	1 cut(s)	1028
TseI	GCWGC	6 cut(s)	1450, 1672, 2012, 2070, 2073, 2380
Tsp45I	GTSAC	1 cut(s)	1028
TspDTI	ATGAA	8 cut(s)	207, 852, 869, 966, 1242, 1632, 2022, 2471
TspGWI	ACGGA	2 cut(s)	1193, 1385
TspRI	CASTG	4 cut(s)	1645, 2245, 2419, 2497
Tth111I	GACNNNGTC	1 cut(s)	2492
VpaK11BI	GGWCC	5 cut(s)	319, 403, 738, 1079, 2357
VspI	ATTAAT	2 cut(s)	1407, 2265
XagI	CCTNNNNNAGG	3 cut(s)	963, 1551, 1850
XapI	RAATTY	9 cut(s)	394, 468, 877, 1189, 1204, 1619, 2059, 2274, 2418
XceI	RCATGY	1 cut(s)	1654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1355
XmaJI	CCTAGG	1 cut(s)	2099
XspI	CTAG	6 cut(s)	890, 1494, 1722, 2100, 2138, 2309
Zsp2I	ATGCAT	2 cut(s)	854, 999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.