Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008419

Physical Location & Seq

Genomic Coordinates Reverse (-)

49001872 .. 49007531

Gene Structure 5660 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00201330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGCTTCCGACTCTTCTGCACCCAATTTCAACAACGGACCTTCCTCTCCCGATGACTCCTTCTCCAGCCCAATCGGCAACACCTTCTCTTCTCCAGCCGACGCCGCCGCCGCTCGCCAGAGAAGCCGCCGCCGATCCACCACACCCACCGCATTCGCAACCCCTCCCGCCTCCCGCTCCCGCTTCGCCGCCTCCGAAACAACCCCAACCCCATCATCTCGCACGCGCCGCCCCAACGGCACCGCACGCACCCCCTCCTCAACCGATGATGGCCCCCCTCTTCGGAAGGCGGCGACAGCTACGGCATGGACGAGGACCGCCCCACCTTCGTCTGGGGCACCAATATCAGCGTCAATGATGTTAAGCTCGCCATTATTAGGCGATTCGCTAGATGTGGATGCCCGCAATGTGTTTGATTATGATTCCGATTTGTATGCCAAGATGGTCAGGTACCCACTTGAGGTTCTTGCTATTTTCGACATTGTTTTGATGGAAATGTTGCCTGTCATAAACCCCTTGTTCGAGAAGCACATTCAGACTCGCATTTTCAATCTCAAAACATCAACATCCATGAGAAATCTGAACCCATCTGATATTGAGAGGATGGTTTCAATAAAGGGGATGATTATTCGGTCTAGTTCAATAATACCAGAGATAAGGGAAGCAATATTTAGATGCCTCGTGTGTGGTTACTACTCTGACCCTCTTCCTGTAGAAAAAGGGAAAATAAATGAACCTACAAGATGCATGAAGGAAGAGTGTCAAGCCAAGAATTCTATGACACTTGTTCACAACCGTTGCAGGTTTACTGATAAACAGATTGTGAGGCTCCAGGAGACGCCTGATGAGATCCCTGAAGGAGGCACACCGCATACTGTGAGTTTGTTGATGCATGACAAACTGGTTGATGCGGGAAAACCAGGTGACAGAGTTGAGGTTACTGGGATATATCGGGCTATGAGCGTAAGAGTTGGACCTACACAGAGAACTACTTATATTGATTGTCTGCATATAAAAAAGTCTGAAAAGTCAAGAATGCTGGCGGAGGAGCAGACGGAAGTTGAGAATTCCTTGGGTGGAAATTCAGATGAGATTCTTTTTGATGAAAAGAAGGTGGAACAATTGAAAAAGCTGGCAAAACAGCCTGATATATATGATCGCCTAACCAGATCTTTGGCACCAAACATCTGGGAGTTAGATGATGTCAAAAAGGGCCTTCTTTGCCAGCTTTTTGGTGGGAATGCTTTGAAGTTGCCATCTGGTGCTAGGTTCCGTGGGGATATTAATATTCTTCTTGTTGGTGATCCTGGAACCAGCAAGTCCCAGCTGCTCCAGTACATACACAAGCTTGCTCCCCGTGGCATATACACTAGTGGAAGAGGGAGTTCTGCTGTTGGTTTGACTGCTTATGTTGCAAAAGATCCTGAAACAGGGGAAACTGTTTTAGAGAGTGGAGCCTTAGTTTTGAGTGATCGGGGCATTTGTTGTATTGATGAATTTGACAAAATGTCTGACAGTGCAAGGAGCATGTTACACGAGGTGATGGAGCAGCAAACTGTGTCAATAGCAAAGGCGGGAATCATTGCTTCCCTTAATGCTAGGACATCAGTCCTGGCTTGTGCAAATCCAAGTGGATCTCGCTATAATCCTCGCTTGTCAGTAATTGACAACATACACCTTCCTCCTACCTTATTATCCAGGTTTGATCTGATCTACTTAATCCTTGACAAGGCTGATGAGCAGACAGACAGGCGCCTTGCAAAGCATATTGTTGCCTTGCACTTTGAGAATCCTGAGACTGTACAGCAGGATGTTTTAGACCTTGCCACGTTGACTGCTTATGTGGGATATGCCCGAAAGCATATTCACCCACAATTATCTGATGAAGCTGCGGAGGAGTTGACTCGTGGCTATGTAGAGTTGAGGAGGAGAGGAAATTTTCCGGGCAGCAGCAAAAAGGTGATAACAGCAACTCCTAGGCAAATCGAGAGTTTGATACGTCTTAGTGAAGCTCTAGCTCGGATTCGTTTTTCAGAATCGGTTGAAAAGCATGATGTAATGGAGGCATTTCGGCTTCTTGAAGTTGCAATGCAACAATCAGCAACAGATCACTCCACTGGAACGATCGACATGGATCTTATTAATACTGGAATTTCGGCAAGTGAAAGAATGAGACGGGAGAATCTAGTGTCATCAGCTCGCAACTTAATTATGGAGAAGATGCAACTTGGGGGACCCTCAATGCGTTTGTTAGAGCTGCTGGAGGAGCTGAAGAAGCAGAGTTCTGGCAGTGAAATTCACCTCAACGATCTTAGGAATGCAATTGCTACGCTTGCAAGTGAGGGATTTGTCGCTGTTCATGGAGACAGTGTCAAAAGAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0000785 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

794

Amino Acids

87.51

Weight (kDa)

7.25

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_OB	PF17207	191 - 320	2.2e-40	MCM OB domain
MCM	PF00493	372 - 594	3.2e-101	MCM P-loop domain
AAA_5	PF07728	429 - 545	7.2e-07	AAA domain (dynein-related subfamily)
MCM_lid	PF17855	610 - 696	1e-26	MCM AAA-lid domain
WHD_MCM4	PF21128	720 - 794	6.7e-07	MCM4, winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16440
fragaria_vesca	FvH4_2g09990
malus_domestica	MD00G1085600.v1.1 MD10G1066500.v1.1
prunus_persica	Prupe.8G088400_v2.0.a1
pyrus_communis	pycom05g04970 pycom05g04980 pycom10g05200
rosa_chinensis	RchiOBHm_Chr6g0266881 RchiOBHm_Chr6g0266891
rosa_laevigata	RLG00000014063 RLG00000014064 RLG00000014065
rosa_multiflora	Rmu_co8507775.1_g000001 Rmu_sc0021142.1_g000001 Rmu_sc0036177.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201330
rosa_rugosa	Rorug06G0027900
rosa_samantha	Rh6AG149000 Rh6BG150000 Rh6CG144900 Rh6DG134200
rosa_wichuraiana	Rw6G012890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	792
Acc65I	GGTACC	1 cut(s)	450
AccB1I	GGYRCC	5 cut(s)	239, 337, 450, 1177, 1752
AccBSI	CCGCTC	2 cut(s)	113, 177
AccII	CGCG	1 cut(s)	226
AclWI	GGATC	6 cut(s)	129, 844, 1298, 1415, 1642, 2142
AcsI	RAATTY	7 cut(s)	772, 1066, 1081, 1496, 1936, 2151, 2295
AcuI	CTGAAG	2 cut(s)	876, 2291
AcyI	GRCGYC	3 cut(s)	102, 839, 1753
AdeI	CACNNNGTG	1 cut(s)	1540
AfaI	GTAC	3 cut(s)	452, 1337, 1803
AfiI	CCNNNNNNNGG	7 cut(s)	282, 332, 377, 460, 860, 1430, 1729
AgsI	TTSAA	8 cut(s)	31, 550, 612, 642, 1126, 1249, 2045, 2081
AhdI	GACNNNNNGTC	1 cut(s)	1507
AhlI	ACTAGT	1 cut(s)	1370
AjnI	CCWGG	5 cut(s)	831, 919, 1306, 1611, 1697
Alw26I	GTCTC	4 cut(s)	830, 1790, 2167, 2358
AlwI	GGATC	6 cut(s)	129, 844, 1298, 1415, 1642, 2142
AoxI	GGCC	2 cut(s)	271, 1213
ApeKI	GCWGC	6 cut(s)	1327, 1549, 1889, 1947, 1950, 2257
ApoI	RAATTY	7 cut(s)	772, 1066, 1081, 1496, 1936, 2151, 2295
AseI	ATTAAT	2 cut(s)	1284, 2142
Asp718I	GGTACC	1 cut(s)	450
AspA2I	CCTAGG	1 cut(s)	1976
AspLEI	GCGC	2 cut(s)	228, 1755
AspS9I	GGNCC	6 cut(s)	38, 272, 315, 974, 1213, 2234
AsuC2I	CCSGG	1 cut(s)	1944
AsuHPI	GGTGA	6 cut(s)	935, 1313, 1552, 1859, 1972, 2291
AvaII	GGWCC	4 cut(s)	38, 315, 974, 2234
AvrII	CCTAGG	1 cut(s)	1976
BaeGI	GKGCMC	1 cut(s)	340
BanI	GGYRCC	5 cut(s)	239, 337, 450, 1177, 1752
BauI	CACGAG	3 cut(s)	680, 1535, 1905
BbvI	GCAGC	6 cut(s)	1314, 1561, 1876, 1959, 1962, 2244
BccI	CCATC	8 cut(s)	220, 263, 436, 484, 595, 598, 1264, 1537
BceAI	ACGGC	2 cut(s)	253, 318
BcgI	CGANNNNNNTGC	3 cut(s)	33, 416, 450
BciT130I	CCWGG	5 cut(s)	833, 921, 1308, 1613, 1699
BcnI	CCSGG	1 cut(s)	1944
BcoDI	GTCTC	4 cut(s)	830, 1790, 2167, 2358
BcuI	ACTAGT	1 cut(s)	1370
BfaI	CTAG	8 cut(s)	389, 636, 1266, 1371, 1599, 1977, 2015, 2186
BfmI	CTRYAG	1 cut(s)	711
BfoI	RGCGCY	1 cut(s)	1756
BfuAI	ACCTGC	1 cut(s)	792
BglI	GCCNNNNNGGC	2 cut(s)	75, 237
BglII	AGATCT	1 cut(s)	1169
BlnI	CCTAGG	1 cut(s)	1976
Bme1390I	CCNGG	6 cut(s)	833, 921, 1308, 1613, 1699, 1944
Bme18I	GGWCC	4 cut(s)	38, 315, 974, 2234
BmeRI	GACNNNNNGTC	1 cut(s)	1507
BmgT120I	GGNCC	6 cut(s)	38, 272, 315, 974, 1213, 2234
BmrFI	CCNGG	6 cut(s)	833, 921, 1308, 1613, 1699, 1944
BmrI	ACTGGG	1 cut(s)	951
BmsI	GCATC	6 cut(s)	388, 665, 734, 879, 898, 2211
BmuI	ACTGGG	1 cut(s)	951
BoxI	GACNNNNGTC	1 cut(s)	1607
BpmI	CTGGAG	5 cut(s)	49, 78, 815, 1316, 2282
BpuEI	CTTGAG	1 cut(s)	479
BpuMI	CCSGG	1 cut(s)	1944
BsaHI	GRCGYC	3 cut(s)	102, 839, 1753
BsaJI	CCNNGG	4 cut(s)	1071, 1273, 1357, 1976
BsaXI	ACNNNNNCTCC	8 cut(s)	47, 77, 1446, 1476, 1957, 1987, 2355, 2385
Bsc4I	CCNNNNNNNGG	7 cut(s)	282, 332, 377, 460, 860, 1430, 1729
Bse1I	ACTGG	5 cut(s)	906, 946, 1333, 2122, 2152
Bse3DI	GCAATG	3 cut(s)	412, 1581, 2094
BseBI	CCWGG	5 cut(s)	833, 921, 1308, 1613, 1699
BseDI	CCNNGG	4 cut(s)	1071, 1273, 1357, 1976
BseGI	GGATG	5 cut(s)	403, 566, 609, 627, 1816
BseLI	CCNNNNNNNGG	7 cut(s)	282, 332, 377, 460, 860, 1430, 1729
BseMI	GCAATG	3 cut(s)	412, 1581, 2094
BseMII	CTCAG	1 cut(s)	1785
BseNI	ACTGG	5 cut(s)	906, 946, 1333, 2122, 2152
BseRI	GAGGAG	6 cut(s)	247, 1061, 1910, 1939, 1942, 2279
BseSI	GKGCMC	1 cut(s)	340
BseXI	GCAGC	6 cut(s)	1314, 1561, 1876, 1959, 1962, 2244
BseYI	CCCAGC	1 cut(s)	1323
Bsh1236I	CGCG	1 cut(s)	226
Bsh1285I	CGRYCG	1 cut(s)	2127
BshFI	GGCC	2 cut(s)	273, 1215
BshNI	GGYRCC	5 cut(s)	239, 337, 450, 1177, 1752
BsiEI	CGRYCG	1 cut(s)	2127
BsiSI	CCGG	1 cut(s)	1943
BslFI	GGGAC	2 cut(s)	1306, 2247
BslI	CCNNNNNNNGG	7 cut(s)	282, 332, 377, 460, 860, 1430, 1729
BsmAI	GTCTC	4 cut(s)	830, 1790, 2167, 2358
BsmBI	CGTCTC	2 cut(s)	830, 2167
BsmFI	GGGAC	2 cut(s)	1306, 2247
BsmI	GAATGC	4 cut(s)	152, 1041, 1246, 2323
BsnI	GGCC	2 cut(s)	273, 1215
Bsp1286I	GDGCHC	1 cut(s)	340
Bsp1407I	TGTACA	1 cut(s)	1801
BspANI	GGCC	2 cut(s)	273, 1215
BspCNI	CTCAG	1 cut(s)	1786
BspFNI	CGCG	1 cut(s)	226
BspMI	ACCTGC	1 cut(s)	792
BspPI	GGATC	6 cut(s)	129, 844, 1298, 1415, 1642, 2142
BspT107I	GGYRCC	5 cut(s)	239, 337, 450, 1177, 1752
BsrBI	CCGCTC	2 cut(s)	113, 177
BsrDI	GCAATG	3 cut(s)	412, 1581, 2094
BsrGI	TGTACA	1 cut(s)	1801
BsrI	ACTGG	5 cut(s)	906, 946, 1333, 2122, 2152
BssECI	CCNNGG	4 cut(s)	1071, 1273, 1357, 1976
BssNI	GRCGYC	3 cut(s)	102, 839, 1753
BssSI	CACGAG	3 cut(s)	680, 1535, 1905
BssT1I	CCWWGG	2 cut(s)	1071, 1976
Bst2BI	CACGAG	3 cut(s)	680, 1535, 1905
Bst2UI	CCWGG	5 cut(s)	833, 921, 1308, 1613, 1699
Bst4CI	ACNGT	7 cut(s)	797, 877, 1441, 1517, 1558, 1801, 2369
Bst6I	CTCTTC	6 cut(s)	19, 94, 285, 711, 750, 1372
BstACI	GRCGYC	3 cut(s)	102, 839, 1753
BstAUI	TGTACA	1 cut(s)	1801
BstDEI	CTNAG	4 cut(s)	1459, 1794, 2003, 2312
BstDSI	CCRYGG	2 cut(s)	1273, 1357
BstENI	CCTNNNNNAGG	3 cut(s)	858, 1428, 1727
BstF5I	GGATG	5 cut(s)	403, 566, 609, 627, 1816
BstFNI	CGCG	1 cut(s)	226
BstH2I	RGCGCY	1 cut(s)	1756
BstHHI	GCGC	2 cut(s)	228, 1755
BstMAI	GTCTC	4 cut(s)	830, 1790, 2167, 2358
BstMCI	CGRYCG	1 cut(s)	2127
BstNI	CCWGG	5 cut(s)	833, 921, 1308, 1613, 1699
BstNSI	RCATGY	1 cut(s)	1531
BstPAI	GACNNNNGTC	1 cut(s)	1607
BstSCI	CCNGG	6 cut(s)	831, 919, 1306, 1611, 1697, 1942
BstSFI	CTRYAG	1 cut(s)	711
BstSLI	GKGCMC	1 cut(s)	340
BstUI	CGCG	1 cut(s)	226
BstV1I	GCAGC	6 cut(s)	1314, 1561, 1876, 1959, 1962, 2244
BstX2I	RGATCY	5 cut(s)	849, 1169, 1420, 1634, 2134
BstXI	CCANNNNNNTGG	3 cut(s)	1174, 1188, 1232
BstYI	RGATCY	5 cut(s)	849, 1169, 1420, 1634, 2134
BsuRI	GGCC	2 cut(s)	273, 1215
BtgI	CCRYGG	2 cut(s)	1273, 1357
BtsCI	GGATG	5 cut(s)	403, 566, 609, 627, 1816
BtsI	GCAGTG	1 cut(s)	2296
BtsIMutI	CAGTG	4 cut(s)	1522, 2115, 2296, 2374
BveI	ACCTGC	1 cut(s)	792
CfoI	GCGC	2 cut(s)	228, 1755
Cfr13I	GGNCC	6 cut(s)	38, 272, 315, 974, 1213, 2234
CseI	GACGC	3 cut(s)	110, 339, 847
CsiI	ACCWGGT	1 cut(s)	919
Csp6I	GTAC	3 cut(s)	451, 1336, 1802
CviAII	CATG	8 cut(s)	306, 571, 748, 893, 1528, 2051, 2131, 2360
CviQI	GTAC	3 cut(s)	451, 1336, 1802
DdeI	CTNAG	4 cut(s)	1459, 1794, 2003, 2312
DinI	GGCGCC	1 cut(s)	1754
DraIII	CACNNNGTG	1 cut(s)	1540
DriI	GACNNNNNGTC	1 cut(s)	1507
Eam1104I	CTCTTC	6 cut(s)	19, 94, 285, 711, 750, 1372
Eam1105I	GACNNNNNGTC	1 cut(s)	1507
EarI	CTCTTC	6 cut(s)	19, 94, 285, 711, 750, 1372
EciI	GGCGGA	1 cut(s)	1058
Eco130I	CCWWGG	2 cut(s)	1071, 1976
Eco47I	GGWCC	4 cut(s)	38, 315, 974, 2234
Eco57I	CTGAAG	2 cut(s)	876, 2291
EcoNI	CCTNNNNNAGG	3 cut(s)	858, 1428, 1727
EcoO109I	RGGNCCY	2 cut(s)	1213, 2234
EcoRI	GAATTC	2 cut(s)	772, 1066
EcoRII	CCWGG	5 cut(s)	831, 919, 1306, 1611, 1697
EcoT14I	CCWWGG	2 cut(s)	1071, 1976
EcoT22I	ATGCAT	2 cut(s)	749, 894
EgeI	GGCGCC	1 cut(s)	1754
EheI	GGCGCC	1 cut(s)	1754
ErhI	CCWWGG	2 cut(s)	1071, 1976
Esp3I	CGTCTC	2 cut(s)	830, 2167
FaeI	CATG	8 cut(s)	309, 574, 751, 896, 1531, 2054, 2134, 2363
FaqI	GGGAC	2 cut(s)	1306, 2247
FatI	CATG	8 cut(s)	305, 570, 747, 892, 1527, 2050, 2130, 2359
FauI	CCCGC	6 cut(s)	175, 182, 188, 410, 904, 1567
FokI	GGATG	5 cut(s)	410, 553, 616, 634, 1823
FspBI	CTAG	8 cut(s)	389, 636, 1266, 1371, 1599, 1977, 2015, 2186
GlaI	GCGC	2 cut(s)	227, 1754
GsaI	CCCAGC	1 cut(s)	1327
GsuI	CTGGAG	5 cut(s)	49, 78, 815, 1316, 2282
HaeII	RGCGCY	1 cut(s)	1756
HaeIII	GGCC	2 cut(s)	273, 1215
HapII	CCGG	1 cut(s)	1943
HgaI	GACGC	3 cut(s)	110, 339, 847
HhaI	GCGC	2 cut(s)	228, 1755
Hin1I	GRCGYC	3 cut(s)	102, 839, 1753
Hin1II	CATG	8 cut(s)	309, 574, 751, 896, 1531, 2054, 2134, 2363
Hin6I	GCGC	2 cut(s)	226, 1753
HinP1I	GCGC	2 cut(s)	226, 1753
HincII	GTYRAC	2 cut(s)	1833, 1902
HindII	GTYRAC	2 cut(s)	1833, 1902
HindIII	AAGCTT	1 cut(s)	1346
HpaII	CCGG	1 cut(s)	1943
HphI	GGTGA	6 cut(s)	935, 1313, 1552, 1859, 1972, 2291
Hpy166II	GTNNAC	4 cut(s)	790, 807, 1833, 1902
Hpy188III	TCNNGA	7 cut(s)	50, 523, 1032, 1424, 1793, 1987, 2078
Hpy8I	GTNNAC	4 cut(s)	790, 807, 1833, 1902
Hpy99I	CGWCG	1 cut(s)	104
HpyCH4III	ACNGT	7 cut(s)	797, 877, 1441, 1517, 1558, 1801, 2369
HpyCH4IV	ACGT	2 cut(s)	1829, 1999
HpyF3I	CTNAG	4 cut(s)	1459, 1794, 2003, 2312
HpySE526I	ACGT	2 cut(s)	1829, 1999
Hsp92I	GRCGYC	3 cut(s)	102, 839, 1753
Hsp92II	CATG	8 cut(s)	309, 574, 751, 896, 1531, 2054, 2134, 2363
HspAI	GCGC	2 cut(s)	226, 1753
KasI	GGCGCC	1 cut(s)	1752
KflI	GGGWCCC	1 cut(s)	2234
KpnI	GGTACC	1 cut(s)	454
LmnI	GCTCC	9 cut(s)	182, 834, 1048, 1335, 1357, 1454, 1524, 1546, 2266
Lsp1109I	GCAGC	6 cut(s)	1314, 1561, 1876, 1959, 1962, 2244
LweI	GCATC	6 cut(s)	388, 665, 734, 879, 898, 2211
MabI	ACCWGGT	1 cut(s)	919
MaeI	CTAG	8 cut(s)	389, 636, 1266, 1371, 1599, 1977, 2015, 2186
MaeII	ACGT	2 cut(s)	1829, 1999
MaeIII	GTNAC	4 cut(s)	689, 923, 937, 1530
MbiI	CCGCTC	2 cut(s)	113, 177
MboII	GAAGA	9 cut(s)	6, 81, 272, 698, 767, 1283, 1389, 2230, 2284
MfeI	CAATTG	2 cut(s)	1121, 2322
MflI	RGATCY	5 cut(s)	849, 1169, 1420, 1634, 2134
MhlI	GDGCHC	1 cut(s)	340
Mly113I	GGCGCC	1 cut(s)	1753
MlyI	GAGTC	4 cut(s)	5, 50, 532, 1897
MmeI	TCCRAC	2 cut(s)	33, 952
Mph1103I	ATGCAT	2 cut(s)	749, 894
MseI	TTAA	6 cut(s)	362, 1284, 1593, 1718, 2142, 2207
MspA1I	CMGCKG	1 cut(s)	1327
MspI	CCGG	1 cut(s)	1943
MspR9I	CCNGG	6 cut(s)	833, 921, 1308, 1613, 1699, 1944
MunI	CAATTG	2 cut(s)	1121, 2322
Mva1269I	GAATGC	4 cut(s)	152, 1041, 1246, 2323
MvaI	CCWGG	5 cut(s)	833, 921, 1308, 1613, 1699
MvnI	CGCG	1 cut(s)	226
NarI	GGCGCC	1 cut(s)	1753
NciI	CCSGG	1 cut(s)	1944
NlaIII	CATG	8 cut(s)	309, 574, 751, 896, 1531, 2054, 2134, 2363
NmuCI	GTSAC	1 cut(s)	923
NsiI	ATGCAT	2 cut(s)	749, 894
NspI	RCATGY	1 cut(s)	1531
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 308
PctI	GAATGC	4 cut(s)	152, 1041, 1246, 2323
PfeI	GAWTC	8 cut(s)	383, 422, 1093, 1578, 1789, 2023, 2036, 2182
PflFI	GACNNNGTC	1 cut(s)	2369
PfoI	TCCNGGA	2 cut(s)	831, 1306
Ple19I	CGATCG	1 cut(s)	2127
PleI	GAGTC	4 cut(s)	5, 50, 532, 1897
PluTI	GGCGCC	1 cut(s)	1756
PpsI	GAGTC	4 cut(s)	5, 50, 532, 1897
PpuMI	RGGWCCY	1 cut(s)	2234
PshAI	GACNNNNGTC	1 cut(s)	1607
PshBI	ATTAAT	2 cut(s)	1284, 2142
Psp5II	RGGWCCY	1 cut(s)	2234
Psp6I	CCWGG	5 cut(s)	831, 919, 1306, 1611, 1697
PspFI	CCCAGC	1 cut(s)	1323
PspGI	CCWGG	5 cut(s)	831, 919, 1306, 1611, 1697
PspPI	GGNCC	6 cut(s)	38, 272, 315, 974, 1213, 2234
PspPPI	RGGWCCY	1 cut(s)	2234
PsuI	RGATCY	5 cut(s)	849, 1169, 1420, 1634, 2134
PsyI	GACNNNGTC	1 cut(s)	2369
PvuI	CGATCG	1 cut(s)	2127
PvuII	CAGCTG	1 cut(s)	1327
RsaI	GTAC	3 cut(s)	452, 1337, 1803
RsaNI	GTAC	3 cut(s)	451, 1336, 1802
SaqAI	TTAA	6 cut(s)	362, 1284, 1593, 1718, 2142, 2207
Sau96I	GGNCC	6 cut(s)	38, 272, 315, 974, 1213, 2234
SchI	GAGTC	4 cut(s)	5, 50, 532, 1897
ScrFI	CCNGG	6 cut(s)	833, 921, 1308, 1613, 1699, 1944
SduI	GDGCHC	1 cut(s)	340
SexAI	ACCWGGT	1 cut(s)	919
SfaNI	GCATC	6 cut(s)	388, 665, 734, 879, 898, 2211
SfcI	CTRYAG	1 cut(s)	711
SfoI	GGCGCC	1 cut(s)	1754
SinI	GGWCC	4 cut(s)	38, 315, 974, 2234
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
SpeI	ACTAGT	1 cut(s)	1370
SspDI	GGCGCC	1 cut(s)	1752
SspI	AATATT	2 cut(s)	669, 1288
SspMI	CTAG	8 cut(s)	389, 636, 1266, 1371, 1599, 1977, 2015, 2186
StyD4I	CCNGG	6 cut(s)	831, 919, 1306, 1611, 1697, 1942
StyI	CCWWGG	2 cut(s)	1071, 1976
TaaI	ACNGT	7 cut(s)	797, 877, 1441, 1517, 1558, 1801, 2369
TaiI	ACGT	2 cut(s)	1832, 2002
TaqI	TCGA	4 cut(s)	477, 522, 1986, 2127
TaqII	GACCGA	1 cut(s)	621
TatI	WGTACW	2 cut(s)	1335, 1801
TauI	GCSGC	8 cut(s)	107, 110, 113, 129, 132, 191, 231, 293
TfiI	GAWTC	8 cut(s)	383, 422, 1093, 1578, 1789, 2023, 2036, 2182
Tru1I	TTAA	6 cut(s)	362, 1284, 1593, 1718, 2142, 2207
Tru9I	TTAA	6 cut(s)	362, 1284, 1593, 1718, 2142, 2207
TscAI	CASTG	4 cut(s)	1522, 2122, 2296, 2374
TseFI	GTSAC	1 cut(s)	923
TseI	GCWGC	6 cut(s)	1327, 1549, 1889, 1947, 1950, 2257
Tsp45I	GTSAC	1 cut(s)	923
TspDTI	ATGAA	6 cut(s)	747, 764, 1119, 1509, 1899, 2348
TspGWI	ACGGA	3 cut(s)	51, 1070, 1262
TspRI	CASTG	4 cut(s)	1522, 2122, 2296, 2374
Tth111I	GACNNNGTC	1 cut(s)	2369
VpaK11BI	GGWCC	4 cut(s)	38, 315, 974, 2234
VspI	ATTAAT	2 cut(s)	1284, 2142
XagI	CCTNNNNNAGG	3 cut(s)	858, 1428, 1727
XapI	RAATTY	7 cut(s)	772, 1066, 1081, 1496, 1936, 2151, 2295
XceI	RCATGY	1 cut(s)	1531
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1232
XmaJI	CCTAGG	1 cut(s)	1976
XspI	CTAG	8 cut(s)	389, 636, 1266, 1371, 1599, 1977, 2015, 2186
Zsp2I	ATGCAT	2 cut(s)	749, 894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.