Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008419

Physical Location & Seq

Genomic Coordinates Forward (+)

12149949 .. 12155795

Gene Structure 5847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G088400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGGCTTCTGATTCTACGCCGGCCGACTTCAACAACGGACCTTCATCTCCCGATGACTCCTTCTCGAGCCCAATCGGCAACACACTCTCCTCCTCCCCTGCCGGCGCTTCCAGGCAGAGGCGGCGGCGCCGATCCACTACGCCGTCTTCGGAATTCGCAACTCCAAGGGCCAACCGGTCCCGGTTCTCCGGCTCCGAAACAACCCCAACCCCATCGCGCACCCGCCGCGCCAATGGACAAAACGGTGCCGTTCCAACCCCCTCCTCCACTGACGGTGACGTCCCGCCGTCTTCGGAAGGCGGCGACGGCTACGACATGGACGAGGACAGGCCCACGTTCGTTTGGGGCACGAACATCAGCGTGAACGACGTTAAGGTGGCGATCGTTAGGTTCCTGAAGAATTTTCGGGACGAGTCGCAGTGGAATACGGAGAGTGAGTACCTTACGGAAGGGAAGTACATTGAGGCCATCAAGAGAGTTATTGAAATGGAAGAAGATTCGCTCGATGTTGATGCACGCAATGTGTTTGATTATGATTCGGACTTGTATGCGAAGATGGTCAGATACCCACTTGAGGTTCTTGCAATTTTCGATATTGTTTTGATGGAAATGCTGCCCGTCATAAACCCCTTGTTCGAAAAGCACATTCAAACTCGGATTTATAATCTCAAAACATCCACTTCAATGAGAAATCTCAACCCATCTGACATTGAGAGGATGGTTTCATTGAAGGGAATGATTATTCGGTCTAGTTCAATAATACCCGAGATAAGGGAAGCAATATTTAGATGCCTTGTGTGTGGCTACTACTCTGACCCGCTTCCAGTAGAGAAAGGGCGCATAACTGAGCCTACAAGATGCTTGAAGGAAGAATGTCAAGCCAGGAATTCTATGACACTTGTTCACAACAGATGCAGATTTACTGATAAACAGATCGTGAGGCTTCAGGAGACTCCTGATGAGATCCCTGAAGGAGGAACACCGCATACGGTGAGCTTGTTGATGCATGACAAGCTGGTTGATGCTGGAAAACCCGGTGATAGAATTGAGGTTACTGGGATATACAGGGCTATGACCGTTAGAGTTGGACCAACTCAGAGAACTGTAAAATCATTGTTCAAGACATACATTGATTGTCTGCATATAAAAAAATCTGACAAGTCAAGAATGCTGGCAGAGGATCAAAATCCGGTGGAAGTTGACAATTCTGTGGCTGGACACTCAGATGAAATTGTTTTTGATGAAAAAAAGGTGGAACAATTGAAAGAGCTGGCAAAACAGCCTGATATATATGATCGATTAACCAGGTCTTTAGCACCAAACATCTGGGAGTTAGATGATGTCAAAAAAGGCCTTCTTTGCCAGATTTTTGGTGGGAATGCTTTGAAGTTGCCATCTGGTGCTCGCTTCCGTGGTGATATTAACATTCTTCTTGTTGGTGATCCTGGAACCAGCAAGTCCCAGCTGCTCCAGTACATACACAAGCTAGCTCCCCGTGGAATATACACTAGTGGAAGAGGGAGTTCTGCTGTTGGCTTGACTGCTTATGTTGCGAAAGATCCTGAAACAGGGGAAACAGTTTTAGAGAGTGGAGCGTTAGTTTTGAGTGATAGAGGCATTTGTTGCATTGACGAATTTGACAAAATGTCTGACAGTGCGAGGAGCATGTTACATGAGGTGATGGAACAGCAAACTGTCTCGATAGCAAAGGCAGGAATCATTGCTTCCCTTAATGCTAGGACTTCAGTCTTGGCTTGTGCAAATCCAAGTGGTTCACGCTATAATCCTCGCTTATCAGTAATTGACAACATACACCTCCCTCCTACCTTATTATCTAGGTTCGATCTGATCTACTTACTCCTTGACAAGGCTGATGAGCATACAGACAGGCGCCTTGCAAAGCATATTGTTGCGTTACACTTTGAGAATCCTGAGACAATACAGCAGGATGTCTTAGACCTTGCTACGTTGACTGCATATGTGGGATATGCGCGAAAGCATATTCATCCACAATTATCTGATGAAGCTGCTGAAGAGTTGACTAGAGGTTATGTTGAATTGAGGAGGAGAGGAAATTTTCCAGGCAGTAGCAAAAAGGTGATAACAGCAACACCTAGGCAGATTGAGAGTTTGATACGACTTAGTGAAGCTCTAGCTCGAATTCGTTTCTCAGAATGGGTTGAAAGGCATGATGTTGTGGAGGCATTCCGGCTTTTGGAAGTTGCAATGCAGCAATCAGCAACCGATCACTCCACTGGAACAATCGACATGGATCTTATCACTACTGGAATTTCGGCAAGTGAAAGAATGAGACGGGAAAGTCTGGTATCAGCAGCTCGCAACATAATTATGGAAAAGTTGCAACTTGGGGGACCCTCAATGCGCTTGTTAGAGTTGCTGGAGGAGCTGAAGACGCAGAGCTCTGGCAATGAAGTCCACCTCAATGATCTGAGGACTGCAATCACAACACTTGCAAGTGAGGGATTTGTGGCTTTTGTTCATGGCGACAGTGTCAAAAGAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0000785 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

842

Amino Acids

93.7

Weight (kDa)

5.94

Isoelectric Point (pI)

49.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16440
fragaria_vesca	FvH4_2g09990
malus_domestica	MD00G1085600.v1.1 MD10G1066500.v1.1
prunus_persica	Prupe.8G088400_v2.0.a1
pyrus_communis	pycom05g04970 pycom05g04980 pycom10g05200
rosa_chinensis	RchiOBHm_Chr6g0266881 RchiOBHm_Chr6g0266891
rosa_laevigata	RLG00000014063 RLG00000014064 RLG00000014065
rosa_multiflora	Rmu_co8507775.1_g000001 Rmu_sc0021142.1_g000001 Rmu_sc0036177.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201330
rosa_rugosa	Rorug06G0027900
rosa_samantha	Rh6AG149000 Rh6BG150000 Rh6CG144900 Rh6DG134200
rosa_wichuraiana	Rw6G012890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	663
AasI	GACNNNNNNGTC	2 cut(s)	278, 2319
AatII	GACGTC	1 cut(s)	282
AccB1I	GGYRCC	3 cut(s)	126, 245, 1890
AccII	CGCG	3 cut(s)	217, 228, 1993
AciI	CCGC	8 cut(s)	121, 124, 223, 226, 284, 300, 818, 983
AclWI	GGATC	6 cut(s)	126, 958, 1188, 1436, 1553, 2280
AcoI	YGGCCR	1 cut(s)	21
AcsI	RAATTY	7 cut(s)	152, 400, 886, 1634, 2074, 2160, 2289
AcuI	CTGAAG	6 cut(s)	416, 929, 990, 1728, 2052, 2429
AcyI	GRCGYC	3 cut(s)	127, 279, 1891
AfaI	GTAC	3 cut(s)	440, 458, 1475
AfiI	CCNNNNNNNGG	7 cut(s)	117, 574, 771, 974, 1568, 1867, 2215
AgeI	ACCGGT	1 cut(s)	174
AhdI	GACNNNNNGTC	1 cut(s)	1645
AhlI	ACTAGT	1 cut(s)	1508
AjnI	CCWGG	5 cut(s)	110, 881, 1304, 1444, 2080
Alw21I	GWGCWC	2 cut(s)	1405, 2423
Alw26I	GTCTC	4 cut(s)	944, 1702, 1928, 2305
AlwI	GGATC	6 cut(s)	126, 958, 1188, 1436, 1553, 2280
Ama87I	CYCGRG	2 cut(s)	64, 764
AoxI	GGCC	5 cut(s)	21, 168, 329, 465, 1351
ApeKI	GCWGC	5 cut(s)	613, 1465, 2027, 2230, 2333
ApoI	RAATTY	7 cut(s)	152, 400, 886, 1634, 2074, 2160, 2289
AsiGI	ACCGGT	1 cut(s)	174
AspA2I	CCTAGG	1 cut(s)	2114
AspLEI	GCGC	8 cut(s)	107, 129, 219, 230, 840, 1893, 1993, 2385
AspS9I	GGNCC	6 cut(s)	38, 168, 177, 330, 1088, 2372
AsuC2I	CCSGG	2 cut(s)	181, 1035
AsuHPI	GGTGA	7 cut(s)	287, 1003, 1049, 1427, 1451, 1690, 2110
AsuII	TTCGAA	1 cut(s)	636
AsuNHI	GCTAGC	1 cut(s)	1486
AvaI	CYCGRG	2 cut(s)	64, 764
AvaII	GGWCC	4 cut(s)	38, 177, 1088, 2372
AvrII	CCTAGG	1 cut(s)	2114
BaeGI	GKGCMC	1 cut(s)	350
BanI	GGYRCC	3 cut(s)	126, 245, 1890
BanII	GRGCYC	2 cut(s)	71, 2423
BbsI	GAAGAC	3 cut(s)	138, 282, 2417
Bbv12I	GWGCWC	2 cut(s)	1405, 2423
BbvI	GCAGC	5 cut(s)	600, 1452, 2014, 2242, 2345
BccI	CCATC	8 cut(s)	220, 476, 550, 598, 709, 712, 1402, 1675
BceAI	ACGGC	4 cut(s)	127, 233, 271, 322
BcgI	CGANNNNNNTGC	2 cut(s)	494, 528
BciT130I	CCWGG	5 cut(s)	112, 883, 1306, 1446, 2082
BcnI	CCSGG	2 cut(s)	181, 1035
BcoDI	GTCTC	4 cut(s)	944, 1702, 1928, 2305
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	8 cut(s)	750, 1487, 1509, 1737, 1836, 2043, 2115, 2153
BfoI	RGCGCY	3 cut(s)	108, 130, 1894
BglI	GCCNNNNNGGC	1 cut(s)	75
BisI	GCNGC	9 cut(s)	122, 125, 226, 301, 614, 1466, 2028, 2231, 2334
BlnI	CCTAGG	1 cut(s)	2114
BlsI	GCNGC	9 cut(s)	123, 126, 227, 302, 615, 1467, 2029, 2232, 2335
Bme1390I	CCNGG	7 cut(s)	112, 181, 883, 1035, 1306, 1446, 2082
Bme18I	GGWCC	4 cut(s)	38, 177, 1088, 2372
BmeRI	GACNNNNNGTC	1 cut(s)	1645
BmeT110I	CYCGRG	2 cut(s)	64, 764
BmgT120I	GGNCC	6 cut(s)	38, 168, 177, 330, 1088, 2372
BmiI	GGNNCC	9 cut(s)	128, 179, 193, 247, 392, 1450, 1892, 2373, 2374
BmrFI	CCNGG	7 cut(s)	112, 181, 883, 1035, 1306, 1446, 2082
BmrI	ACTGGG	1 cut(s)	1065
BmsI	GCATC	6 cut(s)	502, 779, 848, 902, 993, 1012
BmtI	GCTAGC	1 cut(s)	1490
BmuI	ACTGGG	1 cut(s)	1065
BoxI	GACNNNNGTC	1 cut(s)	1745
BpiI	GAAGAC	3 cut(s)	138, 282, 2417
BpmI	CTGGAG	2 cut(s)	1454, 2420
Bpu14I	TTCGAA	1 cut(s)	636
BpuEI	CTTGAG	1 cut(s)	593
BpuMI	CCSGG	2 cut(s)	181, 1035
Bsa29I	ATCGAT	1 cut(s)	1297
BsaBI	GATNNNNATC	1 cut(s)	1185
BsaHI	GRCGYC	3 cut(s)	127, 279, 1891
BsaJI	CCNNGG	4 cut(s)	164, 1411, 1495, 2114
BsaWI	WCCGGW	2 cut(s)	174, 1189
BsaXI	ACNNNNNCTCC	6 cut(s)	71, 101, 422, 452, 1584, 1614
Bsc4I	CCNNNNNNNGG	7 cut(s)	117, 574, 771, 974, 1568, 1867, 2215
Bse118I	RCCGGY	3 cut(s)	19, 101, 174
Bse1I	ACTGG	5 cut(s)	824, 1060, 1471, 2260, 2290
Bse3DI	GCAATG	4 cut(s)	526, 1719, 2232, 2434
Bse8I	GATNNNNATC	1 cut(s)	1185
BseBI	CCWGG	5 cut(s)	112, 883, 1306, 1446, 2082
BseCI	ATCGAT	1 cut(s)	1297
BseDI	CCNNGG	4 cut(s)	164, 1411, 1495, 2114
BseGI	GGATG	4 cut(s)	674, 723, 1954, 2005
BseJI	GATNNNNATC	1 cut(s)	1185
BseLI	CCNNNNNNNGG	7 cut(s)	117, 574, 771, 974, 1568, 1867, 2215
BseMI	GCAATG	4 cut(s)	526, 1719, 2232, 2434
BseMII	CTCAG	6 cut(s)	837, 1109, 1236, 1923, 2184, 2441
BseNI	ACTGG	5 cut(s)	824, 1060, 1471, 2260, 2290
BseRI	GAGGAG	7 cut(s)	79, 82, 253, 1675, 2077, 2080, 2417
BseSI	GKGCMC	1 cut(s)	350
BseX3I	CGGCCG	1 cut(s)	21
BseXI	GCAGC	5 cut(s)	600, 1452, 2014, 2242, 2345
BseYI	CCCAGC	1 cut(s)	1461
Bsh1236I	CGCG	3 cut(s)	217, 228, 1993
Bsh1285I	CGRYCG	2 cut(s)	24, 384
BshFI	GGCC	5 cut(s)	23, 170, 331, 467, 1353
BshNI	GGYRCC	3 cut(s)	126, 245, 1890
BshTI	ACCGGT	1 cut(s)	174
BshVI	ATCGAT	1 cut(s)	1297
BsiEI	CGRYCG	2 cut(s)	24, 384
BsiHKAI	GWGCWC	2 cut(s)	1405, 2423
BsiHKCI	CYCGRG	2 cut(s)	64, 764
BsiSI	CCGG	8 cut(s)	20, 102, 175, 181, 189, 1035, 1190, 2209
BslFI	GGGAC	5 cut(s)	163, 266, 422, 1444, 2385
BslI	CCNNNNNNNGG	7 cut(s)	117, 574, 771, 974, 1568, 1867, 2215
BsmAI	GTCTC	4 cut(s)	944, 1702, 1928, 2305
BsmBI	CGTCTC	1 cut(s)	2305
BsmFI	GGGAC	5 cut(s)	163, 266, 422, 1444, 2385
BsmI	GAATGC	3 cut(s)	1173, 1384, 2204
BsnI	GGCC	5 cut(s)	23, 170, 331, 467, 1353
BsoBI	CYCGRG	2 cut(s)	64, 764
Bsp119I	TTCGAA	1 cut(s)	636
Bsp1286I	GDGCHC	4 cut(s)	71, 350, 1405, 2423
BspACI	CCGC	8 cut(s)	121, 124, 223, 226, 284, 300, 818, 983
BspANI	GGCC	5 cut(s)	23, 170, 331, 467, 1353
BspCNI	CTCAG	6 cut(s)	838, 1108, 1235, 1924, 2183, 2442
BspDI	ATCGAT	1 cut(s)	1297
BspFNI	CGCG	3 cut(s)	217, 228, 1993
BspLI	GGNNCC	9 cut(s)	128, 179, 193, 247, 392, 1450, 1892, 2373, 2374
BspOI	GCTAGC	1 cut(s)	1490
BspPI	GGATC	6 cut(s)	126, 958, 1188, 1436, 1553, 2280
BspT104I	TTCGAA	1 cut(s)	636
BspT107I	GGYRCC	3 cut(s)	126, 245, 1890
BsrDI	GCAATG	4 cut(s)	526, 1719, 2232, 2434
BsrFI	RCCGGY	3 cut(s)	19, 101, 174
BsrI	ACTGG	5 cut(s)	824, 1060, 1471, 2260, 2290
BssAI	RCCGGY	3 cut(s)	19, 101, 174
BssECI	CCNNGG	4 cut(s)	164, 1411, 1495, 2114
BssNI	GRCGYC	3 cut(s)	127, 279, 1891
BssT1I	CCWWGG	2 cut(s)	164, 2114
Bst2UI	CCWGG	5 cut(s)	112, 883, 1306, 1446, 2082
Bst4CI	ACNGT	9 cut(s)	245, 275, 991, 1078, 1105, 1579, 1655, 1696, 2510
Bst6I	CTCTTC	2 cut(s)	1510, 2028
BstACI	GRCGYC	3 cut(s)	127, 279, 1891
BstAPI	GCANNNNNTGC	1 cut(s)	1623
BstBI	TTCGAA	1 cut(s)	636
BstC8I	GCNNGC	8 cut(s)	21, 103, 517, 1173, 1272, 1405, 1488, 2338
BstDEI	CTNAG	8 cut(s)	846, 1095, 1222, 1932, 1954, 2141, 2170, 2450
BstDSI	CCRYGG	2 cut(s)	1411, 1495
BstENI	CCTNNNNNAGG	3 cut(s)	972, 1566, 1865
BstF5I	GGATG	4 cut(s)	674, 723, 1954, 2005
BstFNI	CGCG	3 cut(s)	217, 228, 1993
BstH2I	RGCGCY	3 cut(s)	108, 130, 1894
BstHHI	GCGC	8 cut(s)	107, 129, 219, 230, 840, 1893, 1993, 2385
BstMAI	GTCTC	4 cut(s)	944, 1702, 1928, 2305
BstMCI	CGRYCG	2 cut(s)	24, 384
BstNI	CCWGG	5 cut(s)	112, 883, 1306, 1446, 2082
BstNSI	RCATGY	1 cut(s)	1669
BstPAI	GACNNNNGTC	1 cut(s)	1745
BstSCI	CCNGG	7 cut(s)	110, 179, 881, 1033, 1304, 1444, 2080
BstSLI	GKGCMC	1 cut(s)	350
BstUI	CGCG	3 cut(s)	217, 228, 1993
BstV1I	GCAGC	5 cut(s)	600, 1452, 2014, 2242, 2345
BstV2I	GAAGAC	3 cut(s)	138, 282, 2417
BstX2I	RGATCY	3 cut(s)	963, 1558, 2272
BstXI	CCANNNNNNTGG	2 cut(s)	1326, 1370
BstYI	RGATCY	3 cut(s)	963, 1558, 2272
BstZI	CGGCCG	1 cut(s)	21
Bsu15I	ATCGAT	1 cut(s)	1297
BsuRI	GGCC	5 cut(s)	23, 170, 331, 467, 1353
BsuTUI	ATCGAT	1 cut(s)	1297
BtgI	CCRYGG	2 cut(s)	1411, 1495
BtgZI	GCGATG	1 cut(s)	198
BtsCI	GGATG	4 cut(s)	674, 723, 1954, 2005
BtsI	GCAGTG	1 cut(s)	425
BtsIMutI	CAGTG	5 cut(s)	267, 425, 1660, 2253, 2515
Cac8I	GCNNGC	8 cut(s)	21, 103, 517, 1173, 1272, 1405, 1488, 2338
CfoI	GCGC	8 cut(s)	107, 129, 219, 230, 840, 1893, 1993, 2385
Cfr10I	RCCGGY	3 cut(s)	19, 101, 174
Cfr13I	GGNCC	6 cut(s)	38, 168, 177, 330, 1088, 2372
ClaI	ATCGAT	1 cut(s)	1297
CseI	GACGC	1 cut(s)	2422
CsiI	ACCWGGT	1 cut(s)	1304
Csp6I	GTAC	3 cut(s)	439, 457, 1474
CspAI	ACCGGT	1 cut(s)	174
CviAII	CATG	7 cut(s)	316, 1007, 1666, 1673, 2189, 2269, 2501
CviQI	GTAC	3 cut(s)	439, 457, 1474
DdeI	CTNAG	8 cut(s)	846, 1095, 1222, 1932, 1954, 2141, 2170, 2450
DinI	GGCGCC	2 cut(s)	128, 1892
DrdI	GACNNNNNNGTC	2 cut(s)	278, 2319
DriI	GACNNNNNGTC	1 cut(s)	1645
DseDI	GACNNNNNNGTC	2 cut(s)	278, 2319
EaeI	YGGCCR	1 cut(s)	21
EagI	CGGCCG	1 cut(s)	21
Eam1104I	CTCTTC	2 cut(s)	1510, 2028
Eam1105I	GACNNNNNGTC	1 cut(s)	1645
EarI	CTCTTC	2 cut(s)	1510, 2028
Ecl136II	GAGCTC	1 cut(s)	2421
EclXI	CGGCCG	1 cut(s)	21
Eco130I	CCWWGG	2 cut(s)	164, 2114
Eco147I	AGGCCT	1 cut(s)	1353
Eco24I	GRGCYC	2 cut(s)	71, 2423
Eco47I	GGWCC	4 cut(s)	38, 177, 1088, 2372
Eco52I	CGGCCG	1 cut(s)	21
Eco53kI	GAGCTC	1 cut(s)	2421
Eco57I	CTGAAG	6 cut(s)	416, 929, 990, 1728, 2052, 2429
Eco88I	CYCGRG	2 cut(s)	64, 764
EcoICRI	GAGCTC	1 cut(s)	2421
EcoNI	CCTNNNNNAGG	3 cut(s)	972, 1566, 1865
EcoO109I	RGGNCCY	1 cut(s)	2372
EcoRI	GAATTC	3 cut(s)	152, 886, 2160
EcoRII	CCWGG	5 cut(s)	110, 881, 1304, 1444, 2080
EcoT14I	CCWWGG	2 cut(s)	164, 2114
EcoT22I	ATGCAT	1 cut(s)	1008
EcoT38I	GRGCYC	2 cut(s)	71, 2423
EgeI	GGCGCC	2 cut(s)	128, 1892
EheI	GGCGCC	2 cut(s)	128, 1892
ErhI	CCWWGG	2 cut(s)	164, 2114
Esp3I	CGTCTC	1 cut(s)	2305
FaeI	CATG	7 cut(s)	319, 1010, 1669, 1676, 2192, 2272, 2504
FalI	AAGNNNNNCTT	2 cut(s)	1341, 1373
FaqI	GGGAC	5 cut(s)	163, 266, 422, 1444, 2385
FatI	CATG	7 cut(s)	315, 1006, 1665, 1672, 2188, 2268, 2500
FauI	CCCGC	3 cut(s)	230, 291, 825
FauNDI	CATATG	1 cut(s)	1978
Fnu4HI	GCNGC	9 cut(s)	122, 125, 226, 301, 614, 1466, 2028, 2231, 2334
FokI	GGATG	4 cut(s)	661, 730, 1961, 1992
FriOI	GRGCYC	2 cut(s)	71, 2423
Fsp4HI	GCNGC	9 cut(s)	122, 125, 226, 301, 614, 1466, 2028, 2231, 2334
FspBI	CTAG	8 cut(s)	750, 1487, 1509, 1737, 1836, 2043, 2115, 2153
GlaI	GCGC	8 cut(s)	106, 128, 218, 229, 839, 1892, 1992, 2384
GluI	GCNGC	9 cut(s)	122, 125, 226, 301, 614, 1466, 2028, 2231, 2334
GsaI	CCCAGC	1 cut(s)	1465
GsuI	CTGGAG	2 cut(s)	1454, 2420
HaeII	RGCGCY	3 cut(s)	108, 130, 1894
HaeIII	GGCC	5 cut(s)	23, 170, 331, 467, 1353
HapII	CCGG	8 cut(s)	20, 102, 175, 181, 189, 1035, 1190, 2209
HgaI	GACGC	1 cut(s)	2422
HhaI	GCGC	8 cut(s)	107, 129, 219, 230, 840, 1893, 1993, 2385
Hin1I	GRCGYC	3 cut(s)	127, 279, 1891
Hin1II	CATG	7 cut(s)	319, 1010, 1669, 1676, 2192, 2272, 2504
Hin6I	GCGC	8 cut(s)	105, 127, 217, 228, 838, 1891, 1991, 2383
HinP1I	GCGC	8 cut(s)	105, 127, 217, 228, 838, 1891, 1991, 2383
HincII	GTYRAC	3 cut(s)	1201, 1971, 2040
HindII	GTYRAC	3 cut(s)	1201, 1971, 2040
HinfI	GANTC	8 cut(s)	11, 56, 413, 497, 536, 952, 1716, 1927
HpaII	CCGG	8 cut(s)	20, 102, 175, 181, 189, 1035, 1190, 2209
HphI	GGTGA	7 cut(s)	287, 1003, 1049, 1427, 1451, 1690, 2110
Hpy166II	GTNNAC	7 cut(s)	364, 904, 1201, 1775, 1971, 2040, 2437
Hpy8I	GTNNAC	7 cut(s)	364, 904, 1201, 1775, 1971, 2040, 2437
Hpy99I	CGWCG	2 cut(s)	308, 371
HpyAV	CCTTC	8 cut(s)	51, 70, 290, 443, 724, 859, 965, 1364
HpyCH4III	ACNGT	9 cut(s)	245, 275, 991, 1078, 1105, 1579, 1655, 1696, 2510
HpyCH4IV	ACGT	4 cut(s)	279, 335, 369, 1967
HpyF3I	CTNAG	8 cut(s)	846, 1095, 1222, 1932, 1954, 2141, 2170, 2450
HpySE526I	ACGT	4 cut(s)	279, 335, 369, 1967
Hsp92I	GRCGYC	3 cut(s)	127, 279, 1891
Hsp92II	CATG	7 cut(s)	319, 1010, 1669, 1676, 2192, 2272, 2504
HspAI	GCGC	8 cut(s)	105, 127, 217, 228, 838, 1891, 1991, 2383
KasI	GGCGCC	2 cut(s)	126, 1890
KflI	GGGWCCC	1 cut(s)	2372
KroI	GCCGGC	2 cut(s)	19, 101
KroNI	GCCGGC	2 cut(s)	21, 103
LmnI	GCTCC	6 cut(s)	197, 1473, 1495, 1592, 1662, 2404
Lsp1109I	GCAGC	5 cut(s)	600, 1452, 2014, 2242, 2345
LweI	GCATC	6 cut(s)	502, 779, 848, 902, 993, 1012
MabI	ACCWGGT	1 cut(s)	1304
MaeI	CTAG	8 cut(s)	750, 1487, 1509, 1737, 1836, 2043, 2115, 2153
MaeII	ACGT	4 cut(s)	279, 335, 369, 1967
MaeIII	GTNAC	4 cut(s)	275, 1051, 1668, 1914
MfeI	CAATTG	1 cut(s)	1259
MflI	RGATCY	3 cut(s)	963, 1558, 2272
MhlI	GDGCHC	4 cut(s)	71, 350, 1405, 2423
Mly113I	GGCGCC	2 cut(s)	127, 1891
MlyI	GAGTC	3 cut(s)	50, 422, 946
MmeI	TCCRAC	2 cut(s)	278, 1066
Mph1103I	ATGCAT	1 cut(s)	1008
MroNI	GCCGGC	2 cut(s)	19, 101
MseI	TTAA	4 cut(s)	372, 1301, 1422, 1731
MslI	CAYNNNNRTG	5 cut(s)	359, 683, 1224, 2348, 2442
MspA1I	CMGCKG	1 cut(s)	1465
MspI	CCGG	8 cut(s)	20, 102, 175, 181, 189, 1035, 1190, 2209
MspR9I	CCNGG	7 cut(s)	112, 181, 883, 1035, 1306, 1446, 2082
MunI	CAATTG	1 cut(s)	1259
Mva1269I	GAATGC	3 cut(s)	1173, 1384, 2204
MvaI	CCWGG	5 cut(s)	112, 883, 1306, 1446, 2082
MvnI	CGCG	3 cut(s)	217, 228, 1993
NaeI	GCCGGC	2 cut(s)	21, 103
NarI	GGCGCC	2 cut(s)	127, 1891
NciI	CCSGG	2 cut(s)	181, 1035
NdeI	CATATG	1 cut(s)	1978
NgoMIV	GCCGGC	2 cut(s)	19, 101
NheI	GCTAGC	1 cut(s)	1486
NlaIII	CATG	7 cut(s)	319, 1010, 1669, 1676, 2192, 2272, 2504
NlaIV	GGNNCC	9 cut(s)	128, 179, 193, 247, 392, 1450, 1892, 2373, 2374
NmuCI	GTSAC	1 cut(s)	275
NsiI	ATGCAT	1 cut(s)	1008
NspI	RCATGY	1 cut(s)	1669
NspV	TTCGAA	1 cut(s)	636
PaeR7I	CTCGAG	1 cut(s)	64
PceI	AGGCCT	1 cut(s)	1353
PcsI	WCGNNNNNNNCGW	1 cut(s)	318
PctI	GAATGC	3 cut(s)	1173, 1384, 2204
PdiI	GCCGGC	2 cut(s)	21, 103
PfeI	GAWTC	5 cut(s)	11, 497, 536, 1716, 1927
PflFI	GACNNNGTC	1 cut(s)	2510
PfoI	TCCNGGA	1 cut(s)	1444
PinAI	ACCGGT	1 cut(s)	174
PkrI	GCNGC	9 cut(s)	123, 126, 227, 302, 615, 1467, 2029, 2232, 2335
Ple19I	CGATCG	1 cut(s)	384
PleI	GAGTC	3 cut(s)	50, 421, 946
PluTI	GGCGCC	2 cut(s)	130, 1894
PpsI	GAGTC	3 cut(s)	50, 421, 946
PpuMI	RGGWCCY	1 cut(s)	2372
PshAI	GACNNNNGTC	1 cut(s)	1745
PsiI	TTATAA	1 cut(s)	663
Psp124BI	GAGCTC	1 cut(s)	2423
Psp5II	RGGWCCY	1 cut(s)	2372
Psp6I	CCWGG	5 cut(s)	110, 881, 1304, 1444, 2080
PspFI	CCCAGC	1 cut(s)	1461
PspGI	CCWGG	5 cut(s)	110, 881, 1304, 1444, 2080
PspN4I	GGNNCC	9 cut(s)	128, 179, 193, 247, 392, 1450, 1892, 2373, 2374
PspPI	GGNCC	6 cut(s)	38, 168, 177, 330, 1088, 2372
PspPPI	RGGWCCY	1 cut(s)	2372
PsrI	GAACNNNNNNTAC	2 cut(s)	970, 1002
PsuI	RGATCY	3 cut(s)	963, 1558, 2272
PsyI	GACNNNGTC	1 cut(s)	2510
PvuI	CGATCG	1 cut(s)	384
PvuII	CAGCTG	1 cut(s)	1465
RsaI	GTAC	3 cut(s)	440, 458, 1475
RsaNI	GTAC	3 cut(s)	439, 457, 1474
RseI	CAYNNNNRTG	5 cut(s)	359, 683, 1224, 2348, 2442
SacI	GAGCTC	1 cut(s)	2423
SaqAI	TTAA	4 cut(s)	372, 1301, 1422, 1731
SatI	GCNGC	9 cut(s)	122, 125, 226, 301, 614, 1466, 2028, 2231, 2334
Sau96I	GGNCC	6 cut(s)	38, 168, 177, 330, 1088, 2372
SchI	GAGTC	3 cut(s)	50, 422, 946
ScrFI	CCNGG	7 cut(s)	112, 181, 883, 1035, 1306, 1446, 2082
SduI	GDGCHC	4 cut(s)	71, 350, 1405, 2423
SexAI	ACCWGGT	1 cut(s)	1304
SfaNI	GCATC	6 cut(s)	502, 779, 848, 902, 993, 1012
SfoI	GGCGCC	2 cut(s)	128, 1892
Sfr274I	CTCGAG	1 cut(s)	64
SfuI	TTCGAA	1 cut(s)	636
SinI	GGWCC	4 cut(s)	38, 177, 1088, 2372
SlaI	CTCGAG	1 cut(s)	64
SmiMI	CAYNNNNRTG	5 cut(s)	359, 683, 1224, 2348, 2442
SmlI	CTYRAG	2 cut(s)	64, 572
SmoI	CTYRAG	2 cut(s)	64, 572
SpeI	ACTAGT	1 cut(s)	1508
SseBI	AGGCCT	1 cut(s)	1353
SsiI	CCGC	8 cut(s)	121, 124, 223, 226, 284, 300, 818, 983
SspDI	GGCGCC	2 cut(s)	126, 1890
SspI	AATATT	1 cut(s)	783
SspMI	CTAG	8 cut(s)	750, 1487, 1509, 1737, 1836, 2043, 2115, 2153
SstI	GAGCTC	1 cut(s)	2423
StuI	AGGCCT	1 cut(s)	1353
StyD4I	CCNGG	7 cut(s)	110, 179, 881, 1033, 1304, 1444, 2080
StyI	CCWWGG	2 cut(s)	164, 2114
TaaI	ACNGT	9 cut(s)	245, 275, 991, 1078, 1105, 1579, 1655, 1696, 2510
TaiI	ACGT	4 cut(s)	282, 338, 372, 1970
TaqI	TCGA	9 cut(s)	65, 504, 591, 636, 1297, 1700, 1842, 2158, 2265
TaqII	GACCGA	1 cut(s)	735
TatI	WGTACW	2 cut(s)	456, 1473
TauI	GCSGC	4 cut(s)	124, 127, 228, 303
TfiI	GAWTC	5 cut(s)	11, 497, 536, 1716, 1927
Tru1I	TTAA	4 cut(s)	372, 1301, 1422, 1731
Tru9I	TTAA	4 cut(s)	372, 1301, 1422, 1731
TscAI	CASTG	5 cut(s)	274, 425, 1660, 2260, 2515
TseFI	GTSAC	1 cut(s)	275
TseI	GCWGC	5 cut(s)	613, 1465, 2027, 2230, 2333
Tsp45I	GTSAC	1 cut(s)	275
TspDTI	ATGAA	8 cut(s)	33, 714, 1242, 1257, 1994, 2037, 2445, 2489
TspGWI	ACGGA	4 cut(s)	51, 443, 461, 1400
TspRI	CASTG	5 cut(s)	274, 425, 1660, 2260, 2515
Tth111I	GACNNNGTC	1 cut(s)	2510
VpaK11BI	GGWCC	4 cut(s)	38, 177, 1088, 2372
XagI	CCTNNNNNAGG	3 cut(s)	972, 1566, 1865
XapI	RAATTY	7 cut(s)	152, 400, 886, 1634, 2074, 2160, 2289
XceI	RCATGY	1 cut(s)	1669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1370
XhoI	CTCGAG	1 cut(s)	64
XmaJI	CCTAGG	1 cut(s)	2114
XspI	CTAG	8 cut(s)	750, 1487, 1509, 1737, 1836, 2043, 2115, 2153
ZraI	GACGTC	1 cut(s)	280
Zsp2I	ATGCAT	1 cut(s)	1008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.