Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004194

Physical Location & Seq

Genomic Coordinates Forward (+)

9436197 .. 9443452

Gene Structure 7256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g10690.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGGCGACGACTCTCCCGCCGAAACAGGACCGCCCCAGAGAACGCCGGAGGAGCTCGTAGCCAAGTCCATCGCTCCGGTAAAGAAACAGTTCCTTCGCCCTGCACCCATCAGGCCTGGCTCTAAGGATCAAAACGACGCCGTCTCCGAGGGCAACGCGAAGCCTCCCCAGTCTAGCGTAGTCAAGGAGAAGAAGTCCAAGCGGCAGCTCAAGCGTGAACGGCGCGAGGCACAGAAATTGCCTCTCGGTATCTGTCCAGAGGTAGCAAAGAGAGGAGATGTTACTCGGTGTCCATATAAGGATCAGTGCCGCTACAGCCACGACATAGAAGCCTTTAAAGCTCAGAAACCTGAGGACATAGAGGGAGAGTGTCCTTTTATGGCAGTCGATGAGCCATGTCCTTATGGTCTGTCGTGTAGGTTTTTGGGCACTCATAAAGATGGTGTCGCAGATGGAGATGTGAATGCTCATAGACGAAGCTCTGAGATGAATGGATTAAGCAAAAATGTGCAGAAGCTTTTGTGGAAAGATAAAGTGAAGTTCACCAAGGCAGATGCCAAACTCAAGGCTCTTGGTCTCATGGGGCATGCCAAGTCAAAACTAAATGCCTTGTTAAAGGAGAATGGATTGGATGTTTCCAAGAATTCTGATGTTACTGATAGAAATGACTGTAGTGAATTTCCCAGTAACACAGATGATAAAGTGGAGTCCAACGCTGAGATAAAAGAAGATGGACGTGCCGATGAAACATTTCAATCTGATGAAATGGAATTGTCTGCTGAAGTAAAAGAAGAGGGAGGTGCTAATGAAAAATTTCCATCAGAAGAATCTAGGCCGTCAAAGAAGGCAAGATGTGAAAGTGAAGAGGAGTTTGTCTGTGGTGAAGCAGATGATGGAGGTGAGAGTGCTTTGGAAAAAGTTGTTGGGCAAAGCTGCACGCAACCTGAACCAGAATCTGCAGCTAATGTTGAATTCTCAGAGAATGACAAAAGTTTAAAGACACACCCACGTGAAAAGAAGCTTATTGACTTCAGAGAAAAGTTGTATCTTGCACCTCTGACCACGGTCGGAAATCTTCCATTCCGAAGGGTTTGCAAAGGTTTAGGGGCAGATATAACATGCGGTGAAATGGCAATGTGTACAAATCTTTTGCAGGGTCAAGCATCAGAATGGGCCTTGCTGAGGAGACATTCATCTGAGGATTTGTTTGGAGTTCAGATATGTGGGTCATATCCAGACACTGTAGCACGCACTGTTGAACTTATAGAACAAGAATGTACCGTGGACTTCATTGATATAAATATGGGGTGCCCAATAGATATTGTTGTGAACAAAGGTGCTGGCTCAGCTCTTCTAACAAAACCAATGCGAATGAAAGGCATTGTTCAAGCAGCTTCTGGTACAGTTGACATTCCTATAACTATCAAGGTCCGCACAGCCTATTTTGAGGGAAAGAATCGTATTGACTCACTTATCGCTGACATGGGCAACTGGGGAGCCACTGCAGTAACAATACATGGTCGATCACGACAACAACGCTACAGCAAGCTTGCAGATTGGGAATATGTGTACCAATGCGCTAAAAAAGCCCCTGGTTCTTTGCAAGTCCTTGGAAATGGAGACATATTTTCTTATGTAGATTGGAACAAGCACAAAGTTGAGTGCCCTGAACTGTCTTCATGCATGATTGCTCGAGGAGCGCTAATTAAGCCTTGGATTGTCACAGAAATAAAGGAGCAGAGGCACTGGGACATCACTTCTGGGGAGCGATTTAATATTTTGAAGGATTATGTACGTTGTGGCCTCGAACATTGGGGGTCTGACACAAAAGGTGTCGAGACAACTAGGCGTTTTCTGTTGGAATGGCTCAGCTACACTTGTAGATATGTACCCGTTGGTCTTCTAGATGTCATCCCACAACGACTGAGCTGGCGCCCACCATCTTATTTTGGACGTGATGACCTTGAGACACTAATGGGTTCTGATTCTGCCGCAGACTGGGTTAGGCTGTCTGAGATGTTGCTTGGGAAGGTTCCAGATGGCTTCACATTTGCACCGAAGCATAAATCCAATGCTTATGACCGAGCAGAGAACGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002943 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016491 GO:0016627 GO:0017150 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dus zf-CCCH

Protein Analysis

700

Amino Acids

77.79

Weight (kDa)

5.87

Isoelectric Point (pI)

42.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_DUS3L	PF25585	82 - 115	1.3e-09	DUS3L CCCH zinc finger domain
zf-CCCH_DUS3L	PF25585	116 - 147	1.7e-07	DUS3L CCCH zinc finger domain
Dus	PF01207	350 - 604	1.2e-48	Dihydrouridine synthase (Dus)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38890
fragaria_vesca	FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690
malus_domestica	MD05G1054400.v1.1 MD10G1062000.v1.1
prunus_persica	Prupe.8G082800_v2.0.a1
pyrus_communis	pycom10g04770
rosa_chinensis	RchiOBHm_Chr6g0268371 RchiOBHm_Chr6g0268451 RchiOBHm_Chr6g0268461 RchiOBHm_Chr6g0271651 RchiOBHm_Chr6g0271661
rosa_laevigata	RLG00000013910
rosa_multiflora	Rmu_sc0002404.1_g000009 Rmu_sc0002404.1_g000017 Rmu_sc0007949.1_g000004 Rmu_sc0008184.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199830
rosa_rugosa	Rorug06G0041000 Rorug06G0042100
rosa_samantha	Rh6AG161000 Rh6BG165400 Rh6CG152700 Rh6CG159400 Rh6DG151200
rosa_wichuraiana	Rw6G013920 Rw6G013960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1308, 1932
AccII	CGCG	2 cut(s)	158, 225
AciI	CCGC	7 cut(s)	18, 32, 202, 310, 1122, 1432, 1992
AclWI	GGATC	2 cut(s)	135, 309
AcsI	RAATTY	4 cut(s)	643, 677, 812, 971
AcuI	CTGAAG	2 cut(s)	801, 1015
AcvI	CACGTG	1 cut(s)	1010
AcyI	GRCGYC	2 cut(s)	138, 1933
AfaI	GTAC	6 cut(s)	1141, 1279, 1402, 1571, 1794, 1890
AfeI	AGCGCT	1 cut(s)	1701
AfiI	CCNNNNNNNGG	2 cut(s)	1182, 1998
AgsI	TTSAA	5 cut(s)	755, 971, 1259, 1388, 1783
AjiI	CACGTC	2 cut(s)	737, 1955
AjnI	CCWGG	2 cut(s)	115, 1591
AjuI	GAANNNNNNNTTGG	2 cut(s)	906, 938
AleI	CACNNNNGTG	1 cut(s)	1008
Alw21I	GWGCWC	1 cut(s)	57
Alw26I	GTCTC	6 cut(s)	148, 581, 1180, 1614, 1832, 1961
AlwI	GGATC	2 cut(s)	135, 309
AlwNI	CAGNNNCTG	3 cut(s)	956, 1241, 1397
Ama87I	CYCGRG	1 cut(s)	1692
Aor51HI	AGCGCT	1 cut(s)	1701
AoxI	GGCC	4 cut(s)	113, 833, 1173, 1801
ApeKI	GCWGC	4 cut(s)	205, 933, 959, 1391
ApoI	RAATTY	4 cut(s)	643, 677, 812, 971
Asp700I	GAANNNNTTC	3 cut(s)	89, 750, 813
AspLEI	GCGC	4 cut(s)	225, 1580, 1702, 1935
AspS9I	GGNCC	3 cut(s)	29, 1173, 1429
AsuHPI	GGTGA	4 cut(s)	535, 893, 911, 1136
AvaI	CYCGRG	1 cut(s)	1692
AvaII	GGWCC	2 cut(s)	29, 1429
AxyI	CCTNAGG	1 cut(s)	351
BaeGI	GKGCMC	3 cut(s)	431, 1313, 1667
BanI	GGYRCC	2 cut(s)	1308, 1932
BanII	GRGCYC	1 cut(s)	57
BbrPI	CACGTG	1 cut(s)	1010
BbsI	GAAGAC	2 cut(s)	1668, 1892
Bbv12I	GWGCWC	1 cut(s)	57
BbvCI	CCTCAGC	1 cut(s)	1181
BbvI	GCAGC	4 cut(s)	217, 920, 971, 1403
BccI	CCATC	9 cut(s)	77, 116, 434, 446, 725, 826, 887, 1948, 2033
BceAI	ACGGC	3 cut(s)	125, 236, 820
BcgI	CGANNNNNNTGC	2 cut(s)	1074, 1108
BciT130I	CCWGG	2 cut(s)	117, 1593
BcoDI	GTCTC	6 cut(s)	148, 581, 1180, 1614, 1832, 1961
BfaI	CTAG	4 cut(s)	174, 831, 1845, 1904
BfmI	CTRYAG	6 cut(s)	313, 670, 957, 1242, 1503, 1540
BfoI	RGCGCY	2 cut(s)	1703, 1936
BisI	GCNGC	7 cut(s)	203, 206, 310, 934, 960, 1392, 1992
BlpI	GCTNAGC	2 cut(s)	1345, 1868
BlsI	GCNGC	7 cut(s)	204, 207, 311, 935, 961, 1393, 1993
Bme1390I	CCNGG	2 cut(s)	117, 1593
Bme18I	GGWCC	2 cut(s)	29, 1429
BmeT110I	CYCGRG	1 cut(s)	1692
BmgBI	CACGTC	2 cut(s)	737, 1955
BmgT120I	GGNCC	3 cut(s)	29, 1173, 1429
BmiI	GGNNCC	4 cut(s)	1310, 1498, 1934, 2034
BmrFI	CCNGG	2 cut(s)	117, 1593
BmrI	ACTGGG	5 cut(s)	163, 678, 1501, 1756, 2008
BmsI	GCATC	2 cut(s)	544, 1172
BmuI	ACTGGG	5 cut(s)	163, 678, 1501, 1756, 2008
BoxI	GACNNNNGTC	1 cut(s)	1064
BpiI	GAAGAC	2 cut(s)	1668, 1892
Bpu10I	CCTNAGC	1 cut(s)	1181
Bpu1102I	GCTNAGC	2 cut(s)	1345, 1868
BpuEI	CTTGAG	3 cut(s)	194, 548, 1985
BsaAI	YACGTR	1 cut(s)	1010
BsaHI	GRCGYC	2 cut(s)	138, 1933
BsaI	GGTCTC	1 cut(s)	581
BsaJI	CCNNGG	7 cut(s)	147, 546, 1062, 1281, 1591, 1609, 1712
BsaWI	WCCGGW	1 cut(s)	76
BsaXI	ACNNNNNCTCC	4 cut(s)	128, 158, 179, 209
Bsc4I	CCNNNNNNNGG	2 cut(s)	1182, 1998
Bse1I	ACTGG	5 cut(s)	169, 684, 1496, 1751, 2003
Bse21I	CCTNAGG	1 cut(s)	351
Bse3DI	GCAATG	1 cut(s)	1140
BseBI	CCWGG	2 cut(s)	117, 1593
BseDI	CCNNGG	7 cut(s)	147, 546, 1062, 1281, 1591, 1609, 1712
BseGI	GGATG	2 cut(s)	637, 1911
BseLI	CCNNNNNNNGG	2 cut(s)	1182, 1998
BseMI	GCAATG	1 cut(s)	1140
BseNI	ACTGG	5 cut(s)	169, 684, 1496, 1751, 2003
BseRI	GAGGAG	5 cut(s)	65, 288, 881, 1198, 1710
BseSI	GKGCMC	3 cut(s)	431, 1313, 1667
BseXI	GCAGC	4 cut(s)	217, 920, 971, 1403
BsgI	GTGCAG	3 cut(s)	87, 530, 919
Bsh1236I	CGCG	2 cut(s)	158, 225
Bsh1285I	CGRYCG	1 cut(s)	1068
BshFI	GGCC	4 cut(s)	115, 835, 1175, 1803
BshNI	GGYRCC	2 cut(s)	1308, 1932
BsiEI	CGRYCG	1 cut(s)	1068
BsiHKAI	GWGCWC	1 cut(s)	57
BsiHKCI	CYCGRG	1 cut(s)	1692
BsiSI	CCGG	2 cut(s)	47, 77
BslFI	GGGAC	1 cut(s)	1763
BslI	CCNNNNNNNGG	2 cut(s)	1182, 1998
BsmAI	GTCTC	6 cut(s)	148, 581, 1180, 1614, 1832, 1961
BsmBI	CGTCTC	1 cut(s)	148
BsmFI	GGGAC	1 cut(s)	1763
BsmI	GAATGC	1 cut(s)	469
BsnI	GGCC	4 cut(s)	115, 835, 1175, 1803
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	1 cut(s)	1692
Bsp1286I	GDGCHC	4 cut(s)	57, 431, 1313, 1667
Bsp1407I	TGTACA	1 cut(s)	1139
Bsp143I	GATC	3 cut(s)	127, 301, 1523
Bsp1720I	GCTNAGC	2 cut(s)	1345, 1868
BspACI	CCGC	7 cut(s)	18, 32, 202, 310, 1122, 1432, 1992
BspANI	GGCC	4 cut(s)	115, 835, 1175, 1803
BspFNI	CGCG	2 cut(s)	158, 225
BspLI	GGNNCC	4 cut(s)	1310, 1498, 1934, 2034
BspMAI	CTGCAG	2 cut(s)	961, 1507
BspPI	GGATC	2 cut(s)	135, 309
BspQI	GCTCTTC	1 cut(s)	1356
BspT107I	GGYRCC	2 cut(s)	1308, 1932
BspTNI	GGTCTC	1 cut(s)	581
BsrDI	GCAATG	1 cut(s)	1140
BsrGI	TGTACA	1 cut(s)	1139
BsrI	ACTGG	5 cut(s)	169, 684, 1496, 1751, 2003
BssECI	CCNNGG	7 cut(s)	147, 546, 1062, 1281, 1591, 1609, 1712
BssMI	GATC	3 cut(s)	127, 301, 1523
BssNI	GRCGYC	2 cut(s)	138, 1933
BssT1I	CCWWGG	3 cut(s)	546, 1609, 1712
Bst2UI	CCWGG	2 cut(s)	117, 1593
Bst4CI	ACNGT	8 cut(s)	90, 671, 1066, 1243, 1255, 1282, 1405, 1674
Bst6I	CTCTTC	3 cut(s)	786, 858, 1356
BstACI	GRCGYC	2 cut(s)	138, 1933
BstAUI	TGTACA	1 cut(s)	1139
BstBAI	YACGTR	1 cut(s)	1010
BstC8I	GCNNGC	7 cut(s)	588, 938, 1249, 1342, 1547, 1551, 1931
BstDSI	CCRYGG	2 cut(s)	1062, 1281
BstENI	CCTNNNNNAGG	1 cut(s)	1180
BstF5I	GGATG	2 cut(s)	637, 1911
BstFNI	CGCG	2 cut(s)	158, 225
BstH2I	RGCGCY	2 cut(s)	1703, 1936
BstHHI	GCGC	4 cut(s)	225, 1580, 1702, 1935
BstKTI	GATC	3 cut(s)	130, 304, 1526
BstMAI	GTCTC	6 cut(s)	148, 581, 1180, 1614, 1832, 1961
BstMBI	GATC	3 cut(s)	127, 301, 1523
BstMCI	CGRYCG	1 cut(s)	1068
BstMWI	GCNNNNNNNGC	9 cut(s)	52, 211, 220, 315, 338, 1346, 1586, 1697, 1708
BstNI	CCWGG	2 cut(s)	117, 1593
BstNSI	RCATGY	2 cut(s)	590, 1122
BstPAI	GACNNNNGTC	1 cut(s)	1064
BstSCI	CCNGG	2 cut(s)	115, 1591
BstSFI	CTRYAG	6 cut(s)	313, 670, 957, 1242, 1503, 1540
BstSLI	GKGCMC	3 cut(s)	431, 1313, 1667
BstUI	CGCG	2 cut(s)	158, 225
BstV1I	GCAGC	4 cut(s)	217, 920, 971, 1403
BstV2I	GAAGAC	2 cut(s)	1668, 1892
Bsu36I	CCTNAGG	1 cut(s)	351
BsuRI	GGCC	4 cut(s)	115, 835, 1175, 1803
BtgI	CCRYGG	2 cut(s)	1062, 1281
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	2 cut(s)	737, 1955
BtsCI	GGATG	2 cut(s)	637, 1911
BtsI	GCAGTG	1 cut(s)	1500
BtsIMutI	CAGTG	5 cut(s)	311, 1239, 1251, 1500, 1744
Cac8I	GCNNGC	7 cut(s)	588, 938, 1249, 1342, 1547, 1551, 1931
CaiI	CAGNNNCTG	3 cut(s)	956, 1241, 1397
CfoI	GCGC	4 cut(s)	225, 1580, 1702, 1935
Cfr13I	GGNCC	3 cut(s)	29, 1173, 1429
CseI	GACGC	1 cut(s)	146
Csp6I	GTAC	6 cut(s)	1140, 1278, 1401, 1570, 1793, 1889
CviAII	CATG	8 cut(s)	396, 580, 587, 1119, 1483, 1517, 1680, 1684
CviQI	GTAC	6 cut(s)	1140, 1278, 1401, 1570, 1793, 1889
DinI	GGCGCC	1 cut(s)	1934
DpnI	GATC	3 cut(s)	129, 303, 1525
DpnII	GATC	3 cut(s)	127, 301, 1523
DraI	TTTAAA	2 cut(s)	337, 996
Eam1104I	CTCTTC	3 cut(s)	786, 858, 1356
EarI	CTCTTC	3 cut(s)	786, 858, 1356
Ecl136II	GAGCTC	1 cut(s)	55
Eco130I	CCWWGG	3 cut(s)	546, 1609, 1712
Eco147I	AGGCCT	1 cut(s)	115
Eco24I	GRGCYC	1 cut(s)	57
Eco31I	GGTCTC	1 cut(s)	581
Eco47I	GGWCC	2 cut(s)	29, 1429
Eco47III	AGCGCT	1 cut(s)	1701
Eco53kI	GAGCTC	1 cut(s)	55
Eco57I	CTGAAG	2 cut(s)	801, 1015
Eco72I	CACGTG	1 cut(s)	1010
Eco81I	CCTNAGG	1 cut(s)	351
Eco88I	CYCGRG	1 cut(s)	1692
EcoICRI	GAGCTC	1 cut(s)	55
EcoNI	CCTNNNNNAGG	1 cut(s)	1180
EcoRI	GAATTC	2 cut(s)	643, 971
EcoRII	CCWGG	2 cut(s)	115, 1591
EcoT14I	CCWWGG	3 cut(s)	546, 1609, 1712
EcoT22I	ATGCAT	1 cut(s)	1685
EcoT38I	GRGCYC	1 cut(s)	57
EgeI	GGCGCC	1 cut(s)	1934
EheI	GGCGCC	1 cut(s)	1934
ErhI	CCWWGG	3 cut(s)	546, 1609, 1712
Esp3I	CGTCTC	1 cut(s)	148
FaeI	CATG	8 cut(s)	399, 583, 590, 1122, 1486, 1520, 1683, 1687
FaqI	GGGAC	1 cut(s)	1763
FatI	CATG	8 cut(s)	395, 579, 586, 1118, 1482, 1516, 1679, 1683
FauI	CCCGC	1 cut(s)	25
Fnu4HI	GCNGC	7 cut(s)	203, 206, 310, 934, 960, 1392, 1992
FokI	GGATG	2 cut(s)	644, 1898
FriOI	GRGCYC	1 cut(s)	57
Fsp4HI	GCNGC	7 cut(s)	203, 206, 310, 934, 960, 1392, 1992
FspBI	CTAG	4 cut(s)	174, 831, 1845, 1904
GlaI	GCGC	4 cut(s)	224, 1579, 1701, 1934
GluI	GCNGC	7 cut(s)	203, 206, 310, 934, 960, 1392, 1992
HaeII	RGCGCY	2 cut(s)	1703, 1936
HaeIII	GGCC	4 cut(s)	115, 835, 1175, 1803
HapII	CCGG	2 cut(s)	47, 77
HgaI	GACGC	1 cut(s)	146
HhaI	GCGC	4 cut(s)	225, 1580, 1702, 1935
Hin1I	GRCGYC	2 cut(s)	138, 1933
Hin1II	CATG	8 cut(s)	399, 583, 590, 1122, 1486, 1520, 1683, 1687
Hin6I	GCGC	4 cut(s)	223, 1578, 1700, 1933
HinP1I	GCGC	4 cut(s)	223, 1578, 1700, 1933
HincII	GTYRAC	1 cut(s)	1408
HindII	GTYRAC	1 cut(s)	1408
HindIII	AAGCTT	3 cut(s)	515, 1019, 1547
HinfI	GANTC	7 cut(s)	11, 707, 827, 953, 1456, 1466, 1985
HpaII	CCGG	2 cut(s)	47, 77
HphI	GGTGA	4 cut(s)	535, 893, 911, 1136
Hpy166II	GTNNAC	7 cut(s)	218, 543, 1140, 1285, 1330, 1408, 1570
Hpy188III	TCNNGA	6 cut(s)	257, 1235, 1527, 1837, 1904, 2036
Hpy8I	GTNNAC	7 cut(s)	218, 543, 1140, 1285, 1330, 1408, 1570
Hpy99I	CGWCG	2 cut(s)	11, 140
HpyAV	CCTTC	5 cut(s)	104, 838, 1080, 1777, 2023
HpyCH4III	ACNGT	8 cut(s)	90, 671, 1066, 1243, 1255, 1282, 1405, 1674
HpyCH4IV	ACGT	4 cut(s)	736, 1009, 1795, 1954
HpyF10VI	GCNNNNNNNGC	9 cut(s)	52, 211, 220, 315, 338, 1346, 1586, 1697, 1708
HpySE526I	ACGT	4 cut(s)	736, 1009, 1795, 1954
Hsp92I	GRCGYC	2 cut(s)	138, 1933
Hsp92II	CATG	8 cut(s)	399, 583, 590, 1122, 1486, 1520, 1683, 1687
HspAI	GCGC	4 cut(s)	223, 1578, 1700, 1933
KasI	GGCGCC	1 cut(s)	1932
Kzo9I	GATC	3 cut(s)	127, 301, 1523
LguI	GCTCTTC	1 cut(s)	1356
LmnI	GCTCC	6 cut(s)	52, 79, 1496, 1697, 1735, 1765
Lsp1109I	GCAGC	4 cut(s)	217, 920, 971, 1403
LweI	GCATC	2 cut(s)	544, 1172
MaeI	CTAG	4 cut(s)	174, 831, 1845, 1904
MaeII	ACGT	4 cut(s)	736, 1009, 1795, 1954
MaeIII	GTNAC	5 cut(s)	280, 652, 686, 1507, 1720
MalI	GATC	3 cut(s)	129, 303, 1525
MboI	GATC	3 cut(s)	127, 301, 1523
MboII	GAAGA	9 cut(s)	202, 740, 803, 836, 875, 1067, 1343, 1668, 1892
MhlI	GDGCHC	4 cut(s)	57, 431, 1313, 1667
MluCI	AATT	7 cut(s)	236, 643, 677, 770, 812, 971, 1704
Mly113I	GGCGCC	1 cut(s)	1933
MlyI	GAGTC	3 cut(s)	5, 716, 1460
MmeI	TCCRAC	3 cut(s)	735, 1048, 1839
Mph1103I	ATGCAT	1 cut(s)	1685
MroXI	GAANNNNTTC	3 cut(s)	89, 750, 813
MseI	TTAA	6 cut(s)	336, 497, 614, 995, 1707, 1773
MslI	CAYNNNNRTG	3 cut(s)	438, 1008, 1168
MspI	CCGG	2 cut(s)	47, 77
MspR9I	CCNGG	2 cut(s)	117, 1593
Mva1269I	GAATGC	1 cut(s)	469
MvaI	CCWGG	2 cut(s)	117, 1593
MvnI	CGCG	2 cut(s)	158, 225
MwoI	GCNNNNNNNGC	9 cut(s)	52, 211, 220, 315, 338, 1346, 1586, 1697, 1708
NarI	GGCGCC	1 cut(s)	1933
NdeII	GATC	3 cut(s)	127, 301, 1523
NlaIII	CATG	8 cut(s)	399, 583, 590, 1122, 1486, 1520, 1683, 1687
NlaIV	GGNNCC	4 cut(s)	1310, 1498, 1934, 2034
NmuCI	GTSAC	1 cut(s)	1720
NsiI	ATGCAT	1 cut(s)	1685
NspI	RCATGY	2 cut(s)	590, 1122
OliI	CACNNNNGTG	1 cut(s)	1008
PaeI	GCATGC	1 cut(s)	590
PaeR7I	CTCGAG	1 cut(s)	1692
PceI	AGGCCT	1 cut(s)	115
PciSI	GCTCTTC	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	1 cut(s)	469
PdmI	GAANNNNTTC	3 cut(s)	89, 750, 813
PfeI	GAWTC	4 cut(s)	827, 953, 1456, 1985
PflFI	GACNNNGTC	1 cut(s)	140
PkrI	GCNGC	7 cut(s)	204, 207, 311, 935, 961, 1393, 1993
PleI	GAGTC	3 cut(s)	5, 715, 1460
PluTI	GGCGCC	1 cut(s)	1936
PmaCI	CACGTG	1 cut(s)	1010
PmlI	CACGTG	1 cut(s)	1010
PpsI	GAGTC	3 cut(s)	5, 715, 1460
Ppu21I	YACGTR	1 cut(s)	1010
PshAI	GACNNNNGTC	1 cut(s)	1064
Psp124BI	GAGCTC	1 cut(s)	57
Psp6I	CCWGG	2 cut(s)	115, 1591
PspCI	CACGTG	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	115, 1591
PspN4I	GGNNCC	4 cut(s)	1310, 1498, 1934, 2034
PspPI	GGNCC	3 cut(s)	29, 1173, 1429
PspXI	VCTCGAGB	1 cut(s)	1692
PstI	CTGCAG	2 cut(s)	961, 1507
PstNI	CAGNNNCTG	3 cut(s)	956, 1241, 1397
PsyI	GACNNNGTC	1 cut(s)	140
RsaI	GTAC	6 cut(s)	1141, 1279, 1402, 1571, 1794, 1890
RsaNI	GTAC	6 cut(s)	1140, 1278, 1401, 1570, 1793, 1889
RseI	CAYNNNNRTG	3 cut(s)	438, 1008, 1168
SacI	GAGCTC	1 cut(s)	57
SapI	GCTCTTC	1 cut(s)	1356
SaqAI	TTAA	6 cut(s)	336, 497, 614, 995, 1707, 1773
SatI	GCNGC	7 cut(s)	203, 206, 310, 934, 960, 1392, 1992
Sau3AI	GATC	3 cut(s)	127, 301, 1523
Sau96I	GGNCC	3 cut(s)	29, 1173, 1429
SchI	GAGTC	3 cut(s)	5, 716, 1460
ScrFI	CCNGG	2 cut(s)	117, 1593
SduI	GDGCHC	4 cut(s)	57, 431, 1313, 1667
SfaNI	GCATC	2 cut(s)	544, 1172
SfcI	CTRYAG	6 cut(s)	313, 670, 957, 1242, 1503, 1540
SfoI	GGCGCC	1 cut(s)	1934
Sfr274I	CTCGAG	1 cut(s)	1692
SinI	GGWCC	2 cut(s)	29, 1429
SlaI	CTCGAG	1 cut(s)	1692
SmiMI	CAYNNNNRTG	3 cut(s)	438, 1008, 1168
SmlI	CTYRAG	4 cut(s)	209, 563, 1692, 1964
SmoI	CTYRAG	4 cut(s)	209, 563, 1692, 1964
SphI	GCATGC	1 cut(s)	590
Sse9I	AATT	7 cut(s)	236, 643, 677, 770, 812, 971, 1704
SseBI	AGGCCT	1 cut(s)	115
SsiI	CCGC	7 cut(s)	18, 32, 202, 310, 1122, 1432, 1992
SspDI	GGCGCC	1 cut(s)	1932
SspI	AATATT	1 cut(s)	1777
SspMI	CTAG	4 cut(s)	174, 831, 1845, 1904
SstI	GAGCTC	1 cut(s)	57
StuI	AGGCCT	1 cut(s)	115
StyD4I	CCNGG	2 cut(s)	115, 1591
StyI	CCWWGG	3 cut(s)	546, 1609, 1712
TaaI	ACNGT	8 cut(s)	90, 671, 1066, 1243, 1255, 1282, 1405, 1674
TaiI	ACGT	4 cut(s)	739, 1012, 1798, 1957
TaqI	TCGA	5 cut(s)	387, 1522, 1693, 1806, 1836
TaqII	GACCGA	1 cut(s)	2097
TasI	AATT	7 cut(s)	236, 643, 677, 770, 812, 971, 1704
TatI	WGTACW	1 cut(s)	1139
TauI	GCSGC	3 cut(s)	205, 312, 1994
TfiI	GAWTC	4 cut(s)	827, 953, 1456, 1985
Tru1I	TTAA	6 cut(s)	336, 497, 614, 995, 1707, 1773
Tru9I	TTAA	6 cut(s)	336, 497, 614, 995, 1707, 1773
TscAI	CASTG	5 cut(s)	311, 1246, 1258, 1507, 1751
TseFI	GTSAC	1 cut(s)	1720
TseI	GCWGC	4 cut(s)	205, 933, 959, 1391
Tsp45I	GTSAC	1 cut(s)	1720
TspDTI	ATGAA	8 cut(s)	503, 759, 777, 822, 1182, 1279, 1388, 1668
TspRI	CASTG	5 cut(s)	311, 1246, 1258, 1507, 1751
Tth111I	GACNNNGTC	1 cut(s)	140
VpaK11BI	GGWCC	2 cut(s)	29, 1429
XagI	CCTNNNNNAGG	1 cut(s)	1180
XapI	RAATTY	4 cut(s)	643, 677, 812, 971
XbaI	TCTAGA	1 cut(s)	1903
XceI	RCATGY	2 cut(s)	590, 1122
XhoI	CTCGAG	1 cut(s)	1692
XmnI	GAANNNNTTC	3 cut(s)	89, 750, 813
XspI	CTAG	4 cut(s)	174, 831, 1845, 1904
Zsp2I	ATGCAT	1 cut(s)	1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.