tRNA-dihydrouridine(47) synthase NAD(P)( )
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38890 |
| fragaria_vesca | FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 |
| malus_domestica | MD05G1054400.v1.1 MD10G1062000.v1.1 |
| prunus_persica | Prupe.8G082800_v2.0.a1 |
| pyrus_communis | pycom10g04770 |
| rosa_chinensis | RchiOBHm_Chr6g0268371 RchiOBHm_Chr6g0268451 RchiOBHm_Chr6g0268461 RchiOBHm_Chr6g0271651 RchiOBHm_Chr6g0271661 |
| rosa_laevigata | RLG00000013910 |
| rosa_multiflora | Rmu_sc0002404.1_g000009 Rmu_sc0002404.1_g000017 Rmu_sc0007949.1_g000004 Rmu_sc0008184.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00199830 |
| rosa_rugosa | Rorug06G0041000 Rorug06G0042100 |
| rosa_samantha | Rh6AG161000 Rh6BG165400 Rh6CG152700 Rh6CG159400 Rh6DG151200 |
| rosa_wichuraiana | Rw6G013920 Rw6G013960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 249 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 315 |
| AcyI | GRCGYC | 1 cut(s) | 250 |
| AfaI | GTAC | 2 cut(s) | 111, 207 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 315 |
| AgsI | TTSAA | 2 cut(s) | 100, 125 |
| AjiI | CACGTC | 1 cut(s) | 272 |
| AluBI | AGCT | 2 cut(s) | 189, 246 |
| AluI | AGCT | 2 cut(s) | 189, 246 |
| Alw21I | GWGCWC | 1 cut(s) | 19 |
| Alw26I | GTCTC | 2 cut(s) | 149, 278 |
| Ama87I | CYCGRG | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 118 |
| AspLEI | GCGC | 1 cut(s) | 252 |
| AvaI | CYCGRG | 1 cut(s) | 9 |
| BaeGI | GKGCMC | 1 cut(s) | 322 |
| BanI | GGYRCC | 1 cut(s) | 249 |
| BanII | GRGCYC | 1 cut(s) | 137 |
| BbsI | GAAGAC | 1 cut(s) | 209 |
| Bbv12I | GWGCWC | 1 cut(s) | 19 |
| BccI | CCATC | 2 cut(s) | 265, 365 |
| BcoDI | GTCTC | 2 cut(s) | 149, 278 |
| BfaI | CTAG | 2 cut(s) | 162, 221 |
| BfoI | RGCGCY | 1 cut(s) | 253 |
| BlpI | GCTNAGC | 1 cut(s) | 185 |
| BmeT110I | CYCGRG | 1 cut(s) | 9 |
| BmgBI | CACGTC | 1 cut(s) | 272 |
| BmiI | GGNNCC | 2 cut(s) | 251, 366 |
| BmrI | ACTGGG | 2 cut(s) | 73, 325 |
| BmuI | ACTGGG | 2 cut(s) | 73, 325 |
| BpiI | GAAGAC | 1 cut(s) | 209 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 185 |
| BpuEI | CTTGAG | 1 cut(s) | 302 |
| BsaHI | GRCGYC | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 315 |
| Bse1I | ACTGG | 2 cut(s) | 68, 320 |
| BseDI | CCNNGG | 1 cut(s) | 29 |
| BseGI | GGATG | 1 cut(s) | 228 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BseMII | CTCAG | 2 cut(s) | 233, 336 |
| BseNI | ACTGG | 2 cut(s) | 68, 320 |
| BseRI | GAGGAG | 1 cut(s) | 27 |
| BseSI | GKGCMC | 1 cut(s) | 322 |
| Bsh1285I | CGRYCG | 1 cut(s) | 415 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BshNI | GGYRCC | 1 cut(s) | 249 |
| BsiEI | CGRYCG | 1 cut(s) | 415 |
| BsiHKAI | GWGCWC | 1 cut(s) | 19 |
| BsiHKCI | CYCGRG | 1 cut(s) | 9 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BsmAI | GTCTC | 2 cut(s) | 149, 278 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsnI | GGCC | 1 cut(s) | 120 |
| BsoBI | CYCGRG | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 3 cut(s) | 19, 137, 322 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 185 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspCNI | CTCAG | 2 cut(s) | 234, 337 |
| BspLI | GGNNCC | 2 cut(s) | 251, 366 |
| BspT107I | GGYRCC | 1 cut(s) | 249 |
| BsrI | ACTGG | 2 cut(s) | 68, 320 |
| BssECI | CCNNGG | 1 cut(s) | 29 |
| BssNI | GRCGYC | 1 cut(s) | 250 |
| BssT1I | CCWWGG | 1 cut(s) | 29 |
| BstACI | GRCGYC | 1 cut(s) | 250 |
| BstC8I | GCNNGC | 1 cut(s) | 248 |
| BstDEI | CTNAG | 3 cut(s) | 185, 242, 345 |
| BstF5I | GGATG | 1 cut(s) | 228 |
| BstH2I | RGCGCY | 1 cut(s) | 253 |
| BstHHI | GCGC | 1 cut(s) | 252 |
| BstMAI | GTCTC | 2 cut(s) | 149, 278 |
| BstMCI | CGRYCG | 1 cut(s) | 415 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstSLI | GKGCMC | 1 cut(s) | 322 |
| BstV2I | GAAGAC | 1 cut(s) | 209 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| BtrI | CACGTC | 1 cut(s) | 272 |
| BtsCI | GGATG | 1 cut(s) | 228 |
| BtsI | GCAGTG | 1 cut(s) | 320 |
| BtsIMutI | CAGTG | 3 cut(s) | 61, 309, 320 |
| Cac8I | GCNNGC | 1 cut(s) | 248 |
| CfoI | GCGC | 1 cut(s) | 252 |
| Csp6I | GTAC | 2 cut(s) | 110, 206 |
| CviJI | RGCY | 9 cut(s) | 28, 120, 135, 184, 189, 246, 296, 340, 429 |
| CviKI_1 | RGCY | 9 cut(s) | 28, 120, 135, 184, 189, 246, 296, 340, 429 |
| CviQI | GTAC | 2 cut(s) | 110, 206 |
| DdeI | CTNAG | 3 cut(s) | 185, 242, 345 |
| DinI | GGCGCC | 1 cut(s) | 251 |
| Eco130I | CCWWGG | 1 cut(s) | 29 |
| Eco24I | GRGCYC | 1 cut(s) | 137 |
| Eco88I | CYCGRG | 1 cut(s) | 9 |
| EcoT14I | CCWWGG | 1 cut(s) | 29 |
| EcoT38I | GRGCYC | 1 cut(s) | 137 |
| EgeI | GGCGCC | 1 cut(s) | 251 |
| EheI | GGCGCC | 1 cut(s) | 251 |
| ErhI | CCWWGG | 1 cut(s) | 29 |
| FaiI | YATR | 3 cut(s) | 108, 204, 396 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FokI | GGATG | 1 cut(s) | 215 |
| FriOI | GRGCYC | 1 cut(s) | 137 |
| FspBI | CTAG | 2 cut(s) | 162, 221 |
| GlaI | GCGC | 1 cut(s) | 251 |
| HaeII | RGCGCY | 1 cut(s) | 253 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| HhaI | GCGC | 1 cut(s) | 252 |
| Hin1I | GRCGYC | 1 cut(s) | 250 |
| Hin6I | GCGC | 1 cut(s) | 250 |
| HinP1I | GCGC | 1 cut(s) | 250 |
| HinfI | GANTC | 1 cut(s) | 302 |
| Hpy188I | TCNGA | 3 cut(s) | 139, 301, 346 |
| Hpy188III | TCNNGA | 3 cut(s) | 154, 221, 368 |
| HpyAV | CCTTC | 2 cut(s) | 94, 355 |
| HpyCH4IV | ACGT | 2 cut(s) | 112, 271 |
| HpyCH4V | TGCA | 1 cut(s) | 386 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 3 cut(s) | 185, 242, 345 |
| HpySE526I | ACGT | 2 cut(s) | 112, 271 |
| Hsp92I | GRCGYC | 1 cut(s) | 250 |
| HspAI | GCGC | 1 cut(s) | 250 |
| KasI | GGCGCC | 1 cut(s) | 249 |
| LmnI | GCTCC | 3 cut(s) | 14, 52, 82 |
| LpnPI | CCDG | 6 cut(s) | 49, 63, 222, 232, 301, 381 |
| MaeI | CTAG | 2 cut(s) | 162, 221 |
| MaeII | ACGT | 2 cut(s) | 112, 271 |
| MboII | GAAGA | 1 cut(s) | 209 |
| MhlI | GDGCHC | 3 cut(s) | 19, 137, 322 |
| MluCI | AATT | 1 cut(s) | 21 |
| Mly113I | GGCGCC | 1 cut(s) | 250 |
| MnlI | CCTC | 2 cut(s) | 5, 51 |
| MseI | TTAA | 2 cut(s) | 24, 90 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NarI | GGCGCC | 1 cut(s) | 250 |
| NlaIV | GGNNCC | 2 cut(s) | 251, 366 |
| PaeR7I | CTCGAG | 1 cut(s) | 9 |
| PfeI | GAWTC | 1 cut(s) | 302 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 315 |
| PluTI | GGCGCC | 1 cut(s) | 253 |
| PspN4I | GGNNCC | 2 cut(s) | 251, 366 |
| PspXI | VCTCGAGB | 1 cut(s) | 9 |
| RsaI | GTAC | 2 cut(s) | 111, 207 |
| RsaNI | GTAC | 2 cut(s) | 110, 206 |
| SaqAI | TTAA | 2 cut(s) | 24, 90 |
| SduI | GDGCHC | 3 cut(s) | 19, 137, 322 |
| SetI | ASST | 8 cut(s) | 115, 151, 191, 211, 248, 274, 282, 366 |
| SfoI | GGCGCC | 1 cut(s) | 251 |
| Sfr274I | CTCGAG | 1 cut(s) | 9 |
| SlaI | CTCGAG | 1 cut(s) | 9 |
| SmlI | CTYRAG | 2 cut(s) | 9, 281 |
| SmoI | CTYRAG | 2 cut(s) | 9, 281 |
| Sse9I | AATT | 1 cut(s) | 21 |
| SspDI | GGCGCC | 1 cut(s) | 249 |
| SspI | AATATT | 1 cut(s) | 94 |
| SspMI | CTAG | 2 cut(s) | 162, 221 |
| StyI | CCWWGG | 1 cut(s) | 29 |
| TaiI | ACGT | 2 cut(s) | 115, 274 |
| TaqI | TCGA | 2 cut(s) | 10, 153 |
| TaqII | GACCGA | 1 cut(s) | 429 |
| TasI | AATT | 1 cut(s) | 21 |
| TfiI | GAWTC | 1 cut(s) | 302 |
| Tru1I | TTAA | 2 cut(s) | 24, 90 |
| Tru9I | TTAA | 2 cut(s) | 24, 90 |
| TscAI | CASTG | 3 cut(s) | 68, 316, 327 |
| TspRI | CASTG | 3 cut(s) | 68, 316, 327 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 315 |
| XbaI | TCTAGA | 1 cut(s) | 220 |
| XhoI | CTCGAG | 1 cut(s) | 9 |
| XspI | CTAG | 2 cut(s) | 162, 221 |