Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004194

Physical Location & Seq

Genomic Coordinates Forward (+)

25780663 .. 25786386

Gene Structure 5724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G013960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGGCGACGACTCTCCTGCCGCAACTGGGCCGGGCCCAGAGGTCTCCAACGGCGTGGCGGCGGTGGCGGCTGAGAGGACGCCGGAGGAGCTTGTAGCCAAGTCCATCGCTCCGGTGAAGAAACAGTTCCTTTGCGCTCCTCCCGTCAGACCTTGCTCTAAGGATCAAAACGACGCCGTCTCTAAGGGCAACGCAAAGCCTGCCCAGTCGAACGTAGTGAAGGAGAAGAAGTCCAAGCGGCAGCTCAAGCGTGAACGCCGCGAGGTACAGAAATCGCCCCTCGGTATCTGTCCAGAGGTAGCAAAGAAAGGAGATGTTACTCGGTGTCCATGTAATGATAAGTGCCACTACAGCAATGACATAGAAGCCTATAAGGCTCAGCCATGTCCTTATGGTTTGTCATGTAGGTTCTTGGGTACGCATAAAAATGGTGTTGCAGATGGAGATGTCAATGCTTGTAGAAGAAGCTCTGAGATGAATGGATTAAGCAAAAATGTTCAAAAGCTTGTGTGGAAAAATAAAATGAAGTTCACCAAGGCCGATGCCAAACTCAAGGCTCTTGGTCTCATGGAGAATGGGTTGGTGGTTTCAAAGAATTGTGATGTTACTGATGGAAATGGCTGTAGTGAATTTCCCAGTAACATGGATGATAAAGTGGAGTTGACTGCTGAAATAAAAGAAGAGGGACGGGTTGATGAAACGTTTCCATCTGATGAAATGGAGTTGTCTGCTGAAGTAAAAGAAGAGGGAGCTGCTAATGAAACATTTCCATCTGACGATTCTAGGCCTTCAAAGAAGTCAAGATCTGTAATTGAAGAAGAGTTTGGTTCTGGTGAAGCAGATTATGGAGGTGTGAGAGCTGCAGGAAAAGTTGTGGGGCAAACCTGCATGGAACCTGAACCAGAAGCTGCAGCTAACATTGAATTCTCAGAGAATGATAGAAGTTTAAAGACACACCCACGTGAAAAGAAGCTTATTGACTTCAGAGAAAAGTTGTACCTTGTTTGCAAAGGTTTAGGGGCAGATATAACATGTGGTGAAATGGCAATGTGTACAAATCTTTTGCAGGGTCAAGCTTCGGAATGGGCCCTGCTGAGGAGACATTCATCTGAGGATTTGTTTGGCGTTCAGATATGTCGGGCATATCCAGACACCGTAGCATGCACTGTTGAACTTATAGAACAGGAATGTACCGTAGACTTCATTGATATAAATATGGGGTGCCCAATAGATATTGTTGTGAACAAGGGTGCTGGCTCAGCTGTTCTAACAAAACCAATGCGAATGAAAGGCATTGTGCAAGCAGCTTCTGGTACAGTTGACATTCCTATAACTATCAAGGTCCGCACAGCCTATTTTGAGGGGAAAAATCGCATTGACTCACTTATTGCTGACATGGGTAACTGGGGAGCCAGTGCAGTAACAATACACGGTCGATCACGACAGCAACGCTACGGCAAGCTTGCAGATTGGGAATATGTGTACCAGTGTGCTAAAAAAGCCCCTGATTCTTTGCAAGTTCTTGGAAATGGAGATGTATTTTCCTATGTAGATTGGAACAAGCACAAGGCTGAGTGCCCTGAACTGCACTGGGACGTCACTTCTGGGGAGCGATTTAATATTTTGAAGGATTATGTACGTTGTGGCCTTGAACGTTGGGGCTCTGACACAAAAGGTGTCGAGACAACTAGGCGTTTTCTGTTAGAATGGCTTAGCTACACTTGTAGATATGTACCTGTTGGTCTTCTAGATGTCATCCCACAACGACTGAGTTGGCGCCCACCATCTTATGTTGTACGTGATGACCTTGAGACACTAATGGCTTCTGATTCTGCCGCTGACTGGGTTATGCTCTCTGAGATGTTGCTTGGGAAGGTTCCAGATGGTTTCACATTTGCACCAAATCATAAATCCAATGCTTACGACCGAGCAGAAAACGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002943 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016491 GO:0016627 GO:0017150 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dus zf-CCCH

Protein Analysis

647

Amino Acids

71.31

Weight (kDa)

5.77

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dus	PF01207	335 - 523	1.1e-34	Dihydrouridine synthase (Dus)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38890
fragaria_vesca	FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690 FvH4_2g10690
malus_domestica	MD05G1054400.v1.1 MD10G1062000.v1.1
prunus_persica	Prupe.8G082800_v2.0.a1
pyrus_communis	pycom10g04770
rosa_chinensis	RchiOBHm_Chr6g0268371 RchiOBHm_Chr6g0268451 RchiOBHm_Chr6g0268461 RchiOBHm_Chr6g0271651 RchiOBHm_Chr6g0271661
rosa_laevigata	RLG00000013910
rosa_multiflora	Rmu_sc0002404.1_g000009 Rmu_sc0002404.1_g000017 Rmu_sc0007949.1_g000004 Rmu_sc0008184.1_g000007
rosa_roxburghii	Rroxscaffold_7G00199830
rosa_rugosa	Rorug06G0041000 Rorug06G0042100
rosa_samantha	Rh6AG161000 Rh6BG165400 Rh6CG152700 Rh6CG159400 Rh6DG151200
rosa_wichuraiana	Rw6G013920 Rw6G013960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1599
Acc36I	ACCTGC	1 cut(s)	893
AccB1I	GGYRCC	2 cut(s)	1221, 1776
AccI	GTMKAC	1 cut(s)	1197
AccII	CGCG	1 cut(s)	261
AciI	CCGC	8 cut(s)	21, 59, 62, 68, 238, 259, 1345, 1836
AclI	AACGTT	2 cut(s)	701, 1654
AclWI	GGATC	1 cut(s)	171
AcsI	RAATTY	2 cut(s)	629, 923
AcuI	CTGAAG	2 cut(s)	753, 967
AcvI	CACGTG	1 cut(s)	962
AcyI	GRCGYC	4 cut(s)	80, 174, 1596, 1777
AfiI	CCNNNNNNNGG	3 cut(s)	27, 1095, 1842
AflIII	ACRYGT	1 cut(s)	1031
AgsI	TTSAA	8 cut(s)	500, 591, 792, 815, 923, 1172, 1627, 1652
AjuI	GAANNNNNNNTTGG	2 cut(s)	807, 839
AleI	CACNNNNGTG	1 cut(s)	960
Alw26I	GTCTC	6 cut(s)	49, 184, 569, 1093, 1676, 1805
AlwI	GGATC	1 cut(s)	171
AlwNI	CAGNNNCTG	2 cut(s)	908, 1310
AoxI	GGCC	6 cut(s)	29, 34, 537, 785, 1086, 1645
ApaI	GGGCCC	2 cut(s)	38, 1090
ApeKI	GCWGC	6 cut(s)	241, 752, 860, 908, 911, 1304
ApoI	RAATTY	2 cut(s)	629, 923
Asp700I	GAANNNNTTC	3 cut(s)	125, 702, 765
AspLEI	GCGC	2 cut(s)	137, 1779
AspS9I	GGNCC	6 cut(s)	29, 34, 35, 1086, 1087, 1342
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	4 cut(s)	127, 523, 845, 1049
AvaII	GGWCC	1 cut(s)	1342
BaeGI	GKGCMC	4 cut(s)	38, 1090, 1226, 1580
BanI	GGYRCC	2 cut(s)	1221, 1776
BanII	GRGCYC	3 cut(s)	38, 1090, 1664
BbrPI	CACGTG	1 cut(s)	962
BbsI	GAAGAC	1 cut(s)	1736
BbvCI	CCTCAGC	1 cut(s)	1094
BbvI	GCAGC	6 cut(s)	253, 739, 847, 895, 923, 1316
BccI	CCATC	7 cut(s)	113, 434, 605, 715, 778, 1792, 1877
BceAI	ACGGC	3 cut(s)	67, 161, 1471
BcgI	CGANNNNNNTGC	1 cut(s)	33
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	6 cut(s)	49, 184, 569, 1093, 1676, 1805
BfaI	CTAG	3 cut(s)	783, 1689, 1748
BfmI	CTRYAG	4 cut(s)	349, 622, 861, 909
BfoI	RGCGCY	1 cut(s)	1780
BfuAI	ACCTGC	1 cut(s)	893
BglI	GCCNNNNNGGC	1 cut(s)	374
BglII	AGATCT	1 cut(s)	803
BlpI	GCTNAGC	3 cut(s)	378, 1258, 1712
Bme1390I	CCNGG	1 cut(s)	33
Bme18I	GGWCC	1 cut(s)	1342
BmgT120I	GGNCC	6 cut(s)	29, 34, 35, 1086, 1087, 1342
BmiI	GGNNCC	7 cut(s)	36, 894, 1088, 1223, 1411, 1778, 1878
BmrFI	CCNGG	1 cut(s)	33
BmrI	ACTGGG	6 cut(s)	36, 199, 630, 1414, 1600, 1852
BmsI	GCATC	1 cut(s)	532
BmuI	ACTGGG	6 cut(s)	36, 199, 630, 1414, 1600, 1852
BpiI	GAAGAC	1 cut(s)	1736
Bpu10I	CCTNAGC	1 cut(s)	1094
Bpu1102I	GCTNAGC	3 cut(s)	378, 1258, 1712
BpuEI	CTTGAG	3 cut(s)	230, 536, 1829
BpuMI	CCSGG	1 cut(s)	33
BsaAI	YACGTR	2 cut(s)	962, 1799
BsaHI	GRCGYC	4 cut(s)	80, 174, 1596, 1777
BsaI	GGTCTC	2 cut(s)	49, 569
BsaJI	CCNNGG	2 cut(s)	280, 534
BsaWI	WCCGGW	1 cut(s)	112
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 245, 563, 593
Bsc4I	CCNNNNNNNGG	3 cut(s)	27, 1095, 1842
Bse1I	ACTGG	8 cut(s)	31, 205, 636, 1409, 1413, 1486, 1595, 1847
Bse3DI	GCAATG	2 cut(s)	361, 1053
BseDI	CCNNGG	2 cut(s)	280, 534
BseGI	GGATG	2 cut(s)	652, 1755
BseLI	CCNNNNNNNGG	3 cut(s)	27, 1095, 1842
BseMI	GCAATG	2 cut(s)	361, 1053
BseNI	ACTGG	8 cut(s)	31, 205, 636, 1409, 1413, 1486, 1595, 1847
BseRI	GAGGAG	3 cut(s)	101, 129, 1111
BseSI	GKGCMC	4 cut(s)	38, 1090, 1226, 1580
BseXI	GCAGC	6 cut(s)	253, 739, 847, 895, 923, 1316
BsgI	GTGCAG	2 cut(s)	1437, 1571
Bsh1236I	CGCG	1 cut(s)	261
Bsh1285I	CGRYCG	2 cut(s)	1435, 1927
BshFI	GGCC	6 cut(s)	31, 36, 539, 787, 1088, 1647
BshNI	GGYRCC	2 cut(s)	1221, 1776
BsiEI	CGRYCG	2 cut(s)	1435, 1927
BsiSI	CCGG	3 cut(s)	32, 83, 113
BslFI	GGGAC	2 cut(s)	699, 1607
BslI	CCNNNNNNNGG	3 cut(s)	27, 1095, 1842
BsmAI	GTCTC	6 cut(s)	49, 184, 569, 1093, 1676, 1805
BsmBI	CGTCTC	1 cut(s)	184
BsmFI	GGGAC	2 cut(s)	699, 1607
BsnI	GGCC	6 cut(s)	31, 36, 539, 787, 1088, 1647
Bso31I	GGTCTC	2 cut(s)	49, 569
Bsp120I	GGGCCC	2 cut(s)	34, 1086
Bsp1286I	GDGCHC	5 cut(s)	38, 1090, 1226, 1580, 1664
Bsp1407I	TGTACA	1 cut(s)	1052
Bsp143I	GATC	3 cut(s)	163, 803, 1436
Bsp1720I	GCTNAGC	3 cut(s)	378, 1258, 1712
BspACI	CCGC	8 cut(s)	21, 59, 62, 68, 238, 259, 1345, 1836
BspANI	GGCC	6 cut(s)	31, 36, 539, 787, 1088, 1647
BspFNI	CGCG	1 cut(s)	261
BspLI	GGNNCC	7 cut(s)	36, 894, 1088, 1223, 1411, 1778, 1878
BspMAI	CTGCAG	2 cut(s)	865, 913
BspMI	ACCTGC	1 cut(s)	893
BspPI	GGATC	1 cut(s)	171
BspT107I	GGYRCC	2 cut(s)	1221, 1776
BspTNI	GGTCTC	2 cut(s)	49, 569
BsrDI	GCAATG	2 cut(s)	361, 1053
BsrGI	TGTACA	1 cut(s)	1052
BsrI	ACTGG	8 cut(s)	31, 205, 636, 1409, 1413, 1486, 1595, 1847
BssECI	CCNNGG	2 cut(s)	280, 534
BssMI	GATC	3 cut(s)	163, 803, 1436
BssNI	GRCGYC	4 cut(s)	80, 174, 1596, 1777
BssT1I	CCWWGG	1 cut(s)	534
Bst4CI	ACNGT	6 cut(s)	126, 1156, 1168, 1195, 1318, 1433
Bst6I	CTCTTC	3 cut(s)	675, 738, 813
BstACI	GRCGYC	4 cut(s)	80, 174, 1596, 1777
BstAPI	GCANNNNNTGC	1 cut(s)	200
BstAUI	TGTACA	1 cut(s)	1052
BstBAI	YACGTR	2 cut(s)	962, 1799
BstC8I	GCNNGC	6 cut(s)	201, 1162, 1255, 1302, 1460, 1464
BstF5I	GGATG	2 cut(s)	652, 1755
BstFNI	CGCG	1 cut(s)	261
BstH2I	RGCGCY	1 cut(s)	1780
BstHHI	GCGC	2 cut(s)	137, 1779
BstKTI	GATC	3 cut(s)	166, 806, 1439
BstMAI	GTCTC	6 cut(s)	49, 184, 569, 1093, 1676, 1805
BstMBI	GATC	3 cut(s)	163, 803, 1436
BstMCI	CGRYCG	2 cut(s)	1435, 1927
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 68, 88, 200, 247, 351, 374, 1259, 1499
BstNSI	RCATGY	2 cut(s)	1035, 1164
BstSCI	CCNGG	1 cut(s)	31
BstSFI	CTRYAG	4 cut(s)	349, 622, 861, 909
BstSLI	GKGCMC	4 cut(s)	38, 1090, 1226, 1580
BstUI	CGCG	1 cut(s)	261
BstV1I	GCAGC	6 cut(s)	253, 739, 847, 895, 923, 1316
BstV2I	GAAGAC	1 cut(s)	1736
BstX2I	RGATCY	1 cut(s)	803
BstXI	CCANNNNNNTGG	2 cut(s)	55, 643
BstYI	RGATCY	1 cut(s)	803
BsuRI	GGCC	6 cut(s)	31, 36, 539, 787, 1088, 1647
BtgZI	GCGATG	1 cut(s)	91
BtsCI	GGATG	2 cut(s)	652, 1755
BtsIMutI	CAGTG	4 cut(s)	1164, 1420, 1493, 1588
BveI	ACCTGC	1 cut(s)	893
Cac8I	GCNNGC	6 cut(s)	201, 1162, 1255, 1302, 1460, 1464
CaiI	CAGNNNCTG	2 cut(s)	908, 1310
CfoI	GCGC	2 cut(s)	137, 1779
Cfr13I	GGNCC	6 cut(s)	29, 34, 35, 1086, 1087, 1342
CseI	GACGC	2 cut(s)	88, 182
CviAII	CATG	9 cut(s)	330, 384, 402, 568, 643, 889, 1032, 1161, 1396
DinI	GGCGCC	1 cut(s)	1778
DpnI	GATC	3 cut(s)	165, 805, 1438
DpnII	GATC	3 cut(s)	163, 803, 1436
DraI	TTTAAA	1 cut(s)	948
Eam1104I	CTCTTC	3 cut(s)	675, 738, 813
EarI	CTCTTC	3 cut(s)	675, 738, 813
Eco130I	CCWWGG	1 cut(s)	534
Eco147I	AGGCCT	1 cut(s)	787
Eco24I	GRGCYC	3 cut(s)	38, 1090, 1664
Eco31I	GGTCTC	2 cut(s)	49, 569
Eco47I	GGWCC	1 cut(s)	1342
Eco57I	CTGAAG	2 cut(s)	753, 967
Eco72I	CACGTG	1 cut(s)	962
EcoO109I	RGGNCCY	1 cut(s)	1087
EcoRI	GAATTC	1 cut(s)	923
EcoT14I	CCWWGG	1 cut(s)	534
EcoT38I	GRGCYC	3 cut(s)	38, 1090, 1664
EgeI	GGCGCC	1 cut(s)	1778
EheI	GGCGCC	1 cut(s)	1778
ErhI	CCWWGG	1 cut(s)	534
Esp3I	CGTCTC	1 cut(s)	184
FaeI	CATG	9 cut(s)	333, 387, 405, 571, 646, 892, 1035, 1164, 1399
FaqI	GGGAC	2 cut(s)	699, 1607
FatI	CATG	9 cut(s)	329, 383, 401, 567, 642, 888, 1031, 1160, 1395
FblI	GTMKAC	1 cut(s)	1197
FokI	GGATG	2 cut(s)	659, 1742
FriOI	GRGCYC	3 cut(s)	38, 1090, 1664
FspBI	CTAG	3 cut(s)	783, 1689, 1748
GlaI	GCGC	2 cut(s)	136, 1778
HaeII	RGCGCY	1 cut(s)	1780
HaeIII	GGCC	6 cut(s)	31, 36, 539, 787, 1088, 1647
HapII	CCGG	3 cut(s)	32, 83, 113
HgaI	GACGC	2 cut(s)	88, 182
HhaI	GCGC	2 cut(s)	137, 1779
Hin1I	GRCGYC	4 cut(s)	80, 174, 1596, 1777
Hin1II	CATG	9 cut(s)	333, 387, 405, 571, 646, 892, 1035, 1164, 1399
Hin6I	GCGC	2 cut(s)	135, 1777
HinP1I	GCGC	2 cut(s)	135, 1777
HincII	GTYRAC	2 cut(s)	663, 1321
HindII	GTYRAC	2 cut(s)	663, 1321
HindIII	AAGCTT	4 cut(s)	503, 971, 1074, 1460
HinfI	GANTC	5 cut(s)	11, 779, 1379, 1508, 1829
HpaII	CCGG	3 cut(s)	32, 83, 113
HphI	GGTGA	4 cut(s)	127, 523, 845, 1049
Hpy166II	GTNNAC	8 cut(s)	254, 531, 663, 1053, 1198, 1243, 1321, 1483
Hpy188III	TCNNGA	7 cut(s)	293, 801, 1148, 1440, 1681, 1748, 1880
Hpy8I	GTNNAC	8 cut(s)	254, 531, 663, 1053, 1198, 1243, 1321, 1483
Hpy99I	CGWCG	2 cut(s)	11, 176
HpyAV	CCTTC	4 cut(s)	214, 798, 1621, 1867
HpyCH4III	ACNGT	6 cut(s)	126, 1156, 1168, 1195, 1318, 1433
HpyCH4IV	ACGT	7 cut(s)	213, 701, 961, 1596, 1639, 1654, 1798
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 68, 88, 200, 247, 351, 374, 1259, 1499
HpySE526I	ACGT	7 cut(s)	213, 701, 961, 1596, 1639, 1654, 1798
Hsp92I	GRCGYC	4 cut(s)	80, 174, 1596, 1777
Hsp92II	CATG	9 cut(s)	333, 387, 405, 571, 646, 892, 1035, 1164, 1399
HspAI	GCGC	2 cut(s)	135, 1777
KasI	GGCGCC	1 cut(s)	1776
Kzo9I	GATC	3 cut(s)	163, 803, 1436
LmnI	GCTCC	6 cut(s)	88, 115, 142, 749, 1409, 1609
Lsp1109I	GCAGC	6 cut(s)	253, 739, 847, 895, 923, 1316
LweI	GCATC	1 cut(s)	532
MaeI	CTAG	3 cut(s)	783, 1689, 1748
MaeII	ACGT	7 cut(s)	213, 701, 961, 1596, 1639, 1654, 1798
MaeIII	GTNAC	6 cut(s)	316, 604, 638, 1400, 1420, 1597
MalI	GATC	3 cut(s)	165, 805, 1438
MboI	GATC	3 cut(s)	163, 803, 1436
MboII	GAAGA	8 cut(s)	130, 238, 474, 692, 755, 827, 830, 1736
MflI	RGATCY	1 cut(s)	803
MhlI	GDGCHC	5 cut(s)	38, 1090, 1226, 1580, 1664
MluCI	AATT	4 cut(s)	595, 629, 810, 923
Mly113I	GGCGCC	1 cut(s)	1777
MlyI	GAGTC	2 cut(s)	5, 1373
MmeI	TCCRAC	1 cut(s)	72
MroXI	GAANNNNTTC	3 cut(s)	125, 702, 765
MseI	TTAA	3 cut(s)	485, 947, 1617
MslI	CAYNNNNRTG	2 cut(s)	426, 960
MspA1I	CMGCKG	2 cut(s)	1262, 1838
MspI	CCGG	3 cut(s)	32, 83, 113
MspR9I	CCNGG	1 cut(s)	33
MvnI	CGCG	1 cut(s)	261
MwoI	GCNNNNNNNGC	9 cut(s)	65, 68, 88, 200, 247, 351, 374, 1259, 1499
NarI	GGCGCC	1 cut(s)	1777
NciI	CCSGG	1 cut(s)	33
NdeII	GATC	3 cut(s)	163, 803, 1436
NlaIII	CATG	9 cut(s)	333, 387, 405, 571, 646, 892, 1035, 1164, 1399
NlaIV	GGNNCC	7 cut(s)	36, 894, 1088, 1223, 1411, 1778, 1878
NmuCI	GTSAC	1 cut(s)	1597
NspI	RCATGY	2 cut(s)	1035, 1164
OliI	CACNNNNGTG	1 cut(s)	960
PaeI	GCATGC	1 cut(s)	1164
PceI	AGGCCT	1 cut(s)	787
PciI	ACATGT	1 cut(s)	1031
PdmI	GAANNNNTTC	3 cut(s)	125, 702, 765
PfeI	GAWTC	3 cut(s)	779, 1508, 1829
PflFI	GACNNNGTC	1 cut(s)	176
PleI	GAGTC	2 cut(s)	5, 1373
PluTI	GGCGCC	1 cut(s)	1780
PmaCI	CACGTG	1 cut(s)	962
PmlI	CACGTG	1 cut(s)	962
PpsI	GAGTC	2 cut(s)	5, 1373
Ppu21I	YACGTR	2 cut(s)	962, 1799
PscI	ACATGT	1 cut(s)	1031
Psp1406I	AACGTT	2 cut(s)	701, 1654
PspCI	CACGTG	1 cut(s)	962
PspN4I	GGNNCC	7 cut(s)	36, 894, 1088, 1223, 1411, 1778, 1878
PspOMI	GGGCCC	2 cut(s)	34, 1086
PspPI	GGNCC	6 cut(s)	29, 34, 35, 1086, 1087, 1342
PstI	CTGCAG	2 cut(s)	865, 913
PstNI	CAGNNNCTG	2 cut(s)	908, 1310
PsuI	RGATCY	1 cut(s)	803
PsyI	GACNNNGTC	1 cut(s)	176
PvuII	CAGCTG	1 cut(s)	1262
RseI	CAYNNNNRTG	2 cut(s)	426, 960
SaqAI	TTAA	3 cut(s)	485, 947, 1617
Sau3AI	GATC	3 cut(s)	163, 803, 1436
Sau96I	GGNCC	6 cut(s)	29, 34, 35, 1086, 1087, 1342
SchI	GAGTC	2 cut(s)	5, 1373
ScrFI	CCNGG	1 cut(s)	33
SduI	GDGCHC	5 cut(s)	38, 1090, 1226, 1580, 1664
SfaNI	GCATC	1 cut(s)	532
SfcI	CTRYAG	4 cut(s)	349, 622, 861, 909
SfoI	GGCGCC	1 cut(s)	1778
SinI	GGWCC	1 cut(s)	1342
SmiMI	CAYNNNNRTG	2 cut(s)	426, 960
SmlI	CTYRAG	3 cut(s)	245, 551, 1808
SmoI	CTYRAG	3 cut(s)	245, 551, 1808
SphI	GCATGC	1 cut(s)	1164
Sse9I	AATT	4 cut(s)	595, 629, 810, 923
SseBI	AGGCCT	1 cut(s)	787
SsiI	CCGC	8 cut(s)	21, 59, 62, 68, 238, 259, 1345, 1836
SspDI	GGCGCC	1 cut(s)	1776
SspI	AATATT	1 cut(s)	1621
SspMI	CTAG	3 cut(s)	783, 1689, 1748
StuI	AGGCCT	1 cut(s)	787
StyD4I	CCNGG	1 cut(s)	31
StyI	CCWWGG	1 cut(s)	534
TaaI	ACNGT	6 cut(s)	126, 1156, 1168, 1195, 1318, 1433
TaiI	ACGT	7 cut(s)	216, 704, 964, 1599, 1642, 1657, 1801
TaqI	TCGA	3 cut(s)	209, 1435, 1680
TaqII	GACCGA	1 cut(s)	1941
TasI	AATT	4 cut(s)	595, 629, 810, 923
TatI	WGTACW	1 cut(s)	1052
TauI	GCSGC	6 cut(s)	23, 62, 71, 241, 261, 1838
TfiI	GAWTC	3 cut(s)	779, 1508, 1829
Tru1I	TTAA	3 cut(s)	485, 947, 1617
Tru9I	TTAA	3 cut(s)	485, 947, 1617
TscAI	CASTG	4 cut(s)	1171, 1420, 1493, 1595
TseFI	GTSAC	1 cut(s)	1597
TseI	GCWGC	6 cut(s)	241, 752, 860, 908, 911, 1304
Tsp45I	GTSAC	1 cut(s)	1597
TspDTI	ATGAA	8 cut(s)	491, 539, 711, 729, 774, 1095, 1192, 1301
TspRI	CASTG	4 cut(s)	1171, 1420, 1493, 1595
Tth111I	GACNNNGTC	1 cut(s)	176
VpaK11BI	GGWCC	1 cut(s)	1342
XapI	RAATTY	2 cut(s)	629, 923
XbaI	TCTAGA	1 cut(s)	1747
XceI	RCATGY	2 cut(s)	1035, 1164
XmiI	GTMKAC	1 cut(s)	1197
XmnI	GAANNNNTTC	3 cut(s)	125, 702, 765
XspI	CTAG	3 cut(s)	783, 1689, 1748
ZraI	GACGTC	1 cut(s)	1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.