SKP1-interacting partner
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G76920 |
| fragaria_vesca | FvH4_2g14200 FvH4_2g14200 FvH4_3g14282 |
| malus_domestica | MD05G1021300.v1.1 MD10G1022100.v1.1 |
| prunus_persica | Prupe.8G025000_v2.0.a1 Prupe.8G025000_v2.0.a1 |
| pyrus_communis | pycom05g01240 pycom10g01530 |
| rosa_chinensis | RchiOBHm_Chr2g0119661 RchiOBHm_Chr6g0276341 |
| rosa_laevigata | RLG00000004054 RLG00000013402 RLG00000034851 |
| rosa_multiflora | Rmu_sc0000825.1_g000018 |
| rosa_roxburghii | Rroxscaffold_7G00192360 |
| rosa_rugosa | Rorug02G0346400 Rorug06G0100300.1 Rorug06G0193700 Rorug06G0302000 |
| rosa_samantha | Rh4DG017200 Rh6AG211400 Rh6BG215800 Rh6CG218000 Rh6DG208100 |
| rosa_wichuraiana | Rw6G018470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 717 |
| AccBSI | CCGCTC | 1 cut(s) | 396 |
| AccII | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| AclWI | GGATC | 2 cut(s) | 116, 670 |
| AcoI | YGGCCR | 2 cut(s) | 839, 1062 |
| AcsI | RAATTY | 1 cut(s) | 638 |
| AcyI | GRCGYC | 2 cut(s) | 152, 714 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 521, 679, 685, 812, 1145 |
| AflIII | ACRYGT | 2 cut(s) | 571, 819 |
| AgsI | TTSAA | 5 cut(s) | 71, 835, 892, 1027, 1130 |
| AjiI | CACGTC | 1 cut(s) | 820 |
| AjnI | CCWGG | 3 cut(s) | 530, 678, 1181 |
| AluBI | AGCT | 6 cut(s) | 520, 592, 745, 769, 777, 957 |
| AluI | AGCT | 6 cut(s) | 520, 592, 745, 769, 777, 957 |
| Alw21I | GWGCWC | 3 cut(s) | 594, 779, 923 |
| AlwI | GGATC | 2 cut(s) | 116, 670 |
| Ama87I | CYCGRG | 1 cut(s) | 1139 |
| AoxI | GGCC | 7 cut(s) | 290, 424, 441, 839, 972, 1062, 1179 |
| ApeKI | GCWGC | 5 cut(s) | 206, 669, 769, 781, 864 |
| ApoI | RAATTY | 1 cut(s) | 638 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 746, 1134 |
| AspLEI | GCGC | 4 cut(s) | 498, 509, 601, 669 |
| AspS9I | GGNCC | 2 cut(s) | 441, 580 |
| AsuC2I | CCSGG | 3 cut(s) | 976, 1140, 1141 |
| AsuHPI | GGTGA | 3 cut(s) | 228, 577, 862 |
| AsuII | TTCGAA | 1 cut(s) | 764 |
| AvaI | CYCGRG | 1 cut(s) | 1139 |
| AvaII | GGWCC | 1 cut(s) | 580 |
| BanII | GRGCYC | 2 cut(s) | 594, 779 |
| BbsI | GAAGAC | 2 cut(s) | 72, 691 |
| Bbv12I | GWGCWC | 3 cut(s) | 594, 779, 923 |
| BbvI | GCAGC | 5 cut(s) | 193, 681, 756, 793, 876 |
| BccI | CCATC | 2 cut(s) | 871, 1145 |
| BceAI | ACGGC | 3 cut(s) | 559, 709, 854 |
| BciT130I | CCWGG | 3 cut(s) | 532, 680, 1183 |
| BciVI | GTATCC | 1 cut(s) | 9 |
| BcnI | CCSGG | 3 cut(s) | 976, 1140, 1141 |
| BfaI | CTAG | 2 cut(s) | 12, 36 |
| BfuI | GTATCC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 6 cut(s) | 532, 680, 976, 1140, 1141, 1183 |
| Bme18I | GGWCC | 1 cut(s) | 580 |
| BmeT110I | CYCGRG | 1 cut(s) | 1139 |
| BmgBI | CACGTC | 1 cut(s) | 820 |
| BmgT120I | GGNCC | 2 cut(s) | 441, 580 |
| BmiI | GGNNCC | 4 cut(s) | 365, 526, 547, 734 |
| BmrFI | CCNGG | 6 cut(s) | 532, 680, 976, 1140, 1141, 1183 |
| BmsI | GCATC | 1 cut(s) | 972 |
| BpiI | GAAGAC | 2 cut(s) | 72, 691 |
| BpmI | CTGGAG | 1 cut(s) | 818 |
| Bpu14I | TTCGAA | 1 cut(s) | 764 |
| BpuMI | CCSGG | 3 cut(s) | 976, 1140, 1141 |
| BsaBI | GATNNNNATC | 1 cut(s) | 196 |
| BsaHI | GRCGYC | 2 cut(s) | 152, 714 |
| BsaJI | CCNNGG | 3 cut(s) | 131, 725, 1139 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 154, 184, 308, 311, 338, 341, 437, 467 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 521, 679, 685, 812, 1145 |
| Bse118I | RCCGGY | 1 cut(s) | 985 |
| Bse1I | ACTGG | 2 cut(s) | 125, 736 |
| Bse3DI | GCAATG | 1 cut(s) | 1193 |
| Bse8I | GATNNNNATC | 1 cut(s) | 196 |
| BseBI | CCWGG | 3 cut(s) | 532, 680, 1183 |
| BseDI | CCNNGG | 3 cut(s) | 131, 725, 1139 |
| BseGI | GGATG | 2 cut(s) | 83, 987 |
| BseJI | GATNNNNATC | 1 cut(s) | 196 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 521, 679, 685, 812, 1145 |
| BseMI | GCAATG | 1 cut(s) | 1193 |
| BseMII | CTCAG | 1 cut(s) | 929 |
| BseNI | ACTGG | 2 cut(s) | 125, 736 |
| BseX3I | CGGCCG | 1 cut(s) | 839 |
| BseXI | GCAGC | 5 cut(s) | 193, 681, 756, 793, 876 |
| BseYI | CCCAGC | 2 cut(s) | 516, 957 |
| BsgI | GTGCAG | 1 cut(s) | 739 |
| Bsh1236I | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| Bsh1285I | CGRYCG | 2 cut(s) | 628, 842 |
| BshFI | GGCC | 7 cut(s) | 292, 426, 443, 841, 974, 1064, 1181 |
| BsiEI | CGRYCG | 2 cut(s) | 628, 842 |
| BsiHKAI | GWGCWC | 3 cut(s) | 594, 779, 923 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1139 |
| BsiSI | CCGG | 8 cut(s) | 289, 423, 567, 615, 806, 975, 986, 1140 |
| BslFI | GGGAC | 5 cut(s) | 123, 454, 830, 980, 1106 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 521, 679, 685, 812, 1145 |
| BsmFI | GGGAC | 5 cut(s) | 123, 454, 830, 980, 1106 |
| BsnI | GGCC | 7 cut(s) | 292, 426, 443, 841, 974, 1064, 1181 |
| BsoBI | CYCGRG | 1 cut(s) | 1139 |
| Bsp119I | TTCGAA | 1 cut(s) | 764 |
| Bsp1286I | GDGCHC | 3 cut(s) | 594, 779, 923 |
| Bsp143I | GATC | 3 cut(s) | 121, 191, 675 |
| Bsp19I | CCATGG | 1 cut(s) | 131 |
| BspANI | GGCC | 7 cut(s) | 292, 426, 443, 841, 974, 1064, 1181 |
| BspCNI | CTCAG | 1 cut(s) | 930 |
| BspFNI | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| BspLI | GGNNCC | 4 cut(s) | 365, 526, 547, 734 |
| BspPI | GGATC | 2 cut(s) | 116, 670 |
| BspQI | GCTCTTC | 1 cut(s) | 752 |
| BspT104I | TTCGAA | 1 cut(s) | 764 |
| BsrBI | CCGCTC | 1 cut(s) | 396 |
| BsrDI | GCAATG | 1 cut(s) | 1193 |
| BsrFI | RCCGGY | 1 cut(s) | 985 |
| BsrI | ACTGG | 2 cut(s) | 125, 736 |
| BssAI | RCCGGY | 1 cut(s) | 985 |
| BssECI | CCNNGG | 3 cut(s) | 131, 725, 1139 |
| BssMI | GATC | 3 cut(s) | 121, 191, 675 |
| BssNI | GRCGYC | 2 cut(s) | 152, 714 |
| BssT1I | CCWWGG | 1 cut(s) | 131 |
| Bst2UI | CCWGG | 3 cut(s) | 532, 680, 1183 |
| Bst4CI | ACNGT | 1 cut(s) | 760 |
| Bst6I | CTCTTC | 3 cut(s) | 106, 344, 752 |
| BstACI | GRCGYC | 2 cut(s) | 152, 714 |
| BstBI | TTCGAA | 1 cut(s) | 764 |
| BstC8I | GCNNGC | 7 cut(s) | 217, 362, 594, 632, 722, 754, 779 |
| BstDEI | CTNAG | 1 cut(s) | 938 |
| BstDSI | CCRYGG | 2 cut(s) | 131, 725 |
| BstF5I | GGATG | 2 cut(s) | 83, 987 |
| BstFNI | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| BstHHI | GCGC | 4 cut(s) | 498, 509, 601, 669 |
| BstKTI | GATC | 3 cut(s) | 124, 194, 678 |
| BstMBI | GATC | 3 cut(s) | 121, 191, 675 |
| BstMCI | CGRYCG | 2 cut(s) | 628, 842 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 212, 366, 504, 598, 717, 778, 802 |
| BstNI | CCWGG | 3 cut(s) | 532, 680, 1183 |
| BstSCI | CCNGG | 6 cut(s) | 530, 678, 974, 1138, 1139, 1181 |
| BstUI | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| BstV1I | GCAGC | 5 cut(s) | 193, 681, 756, 793, 876 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 691 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 132, 1072 |
| BstZI | CGGCCG | 1 cut(s) | 839 |
| BsuI | GTATCC | 1 cut(s) | 9 |
| BsuRI | GGCC | 7 cut(s) | 292, 426, 443, 841, 974, 1064, 1181 |
| BtgI | CCRYGG | 2 cut(s) | 131, 725 |
| BtgZI | GCGATG | 1 cut(s) | 1164 |
| BtrI | CACGTC | 1 cut(s) | 820 |
| BtsCI | GGATG | 2 cut(s) | 83, 987 |
| BtsI | GCAGTG | 1 cut(s) | 791 |
| BtsIMutI | CAGTG | 2 cut(s) | 743, 791 |
| Cac8I | GCNNGC | 7 cut(s) | 217, 362, 594, 632, 722, 754, 779 |
| CfoI | GCGC | 4 cut(s) | 498, 509, 601, 669 |
| Cfr10I | RCCGGY | 1 cut(s) | 985 |
| Cfr13I | GGNCC | 2 cut(s) | 441, 580 |
| Cfr9I | CCCGGG | 1 cut(s) | 1139 |
| CseI | GACGC | 4 cut(s) | 160, 198, 562, 579 |
| CviAII | CATG | 2 cut(s) | 132, 577 |
| DdeI | CTNAG | 1 cut(s) | 938 |
| DpnI | GATC | 3 cut(s) | 123, 193, 677 |
| DpnII | GATC | 3 cut(s) | 121, 191, 675 |
| EaeI | YGGCCR | 2 cut(s) | 839, 1062 |
| EagI | CGGCCG | 1 cut(s) | 839 |
| Eam1104I | CTCTTC | 3 cut(s) | 106, 344, 752 |
| EarI | CTCTTC | 3 cut(s) | 106, 344, 752 |
| EciI | GGCGGA | 7 cut(s) | 175, 517, 553, 601, 701, 745, 994 |
| Ecl136II | GAGCTC | 2 cut(s) | 592, 777 |
| EclXI | CGGCCG | 1 cut(s) | 839 |
| Eco130I | CCWWGG | 1 cut(s) | 131 |
| Eco24I | GRGCYC | 2 cut(s) | 594, 779 |
| Eco32I | GATATC | 1 cut(s) | 829 |
| Eco47I | GGWCC | 1 cut(s) | 580 |
| Eco52I | CGGCCG | 1 cut(s) | 839 |
| Eco53kI | GAGCTC | 2 cut(s) | 592, 777 |
| Eco88I | CYCGRG | 1 cut(s) | 1139 |
| EcoICRI | GAGCTC | 2 cut(s) | 592, 777 |
| EcoRII | CCWGG | 3 cut(s) | 530, 678, 1181 |
| EcoRV | GATATC | 1 cut(s) | 829 |
| EcoT14I | CCWWGG | 1 cut(s) | 131 |
| EcoT38I | GRGCYC | 2 cut(s) | 594, 779 |
| ErhI | CCWWGG | 1 cut(s) | 131 |
| FaeI | CATG | 2 cut(s) | 135, 580 |
| FaiI | YATR | 3 cut(s) | 31, 133, 578 |
| FaqI | GGGAC | 5 cut(s) | 123, 454, 830, 980, 1106 |
| FatI | CATG | 2 cut(s) | 131, 576 |
| FauI | CCCGC | 1 cut(s) | 154 |
| FokI | GGATG | 2 cut(s) | 70, 994 |
| FriOI | GRGCYC | 2 cut(s) | 594, 779 |
| FspBI | CTAG | 2 cut(s) | 12, 36 |
| GlaI | GCGC | 4 cut(s) | 497, 508, 600, 668 |
| GsaI | CCCAGC | 2 cut(s) | 520, 961 |
| GsuI | CTGGAG | 1 cut(s) | 818 |
| HaeIII | GGCC | 7 cut(s) | 292, 426, 443, 841, 974, 1064, 1181 |
| HapII | CCGG | 8 cut(s) | 289, 423, 567, 615, 806, 975, 986, 1140 |
| HgaI | GACGC | 4 cut(s) | 160, 198, 562, 579 |
| HhaI | GCGC | 4 cut(s) | 498, 509, 601, 669 |
| Hin1I | GRCGYC | 2 cut(s) | 152, 714 |
| Hin1II | CATG | 2 cut(s) | 135, 580 |
| Hin6I | GCGC | 4 cut(s) | 496, 507, 599, 667 |
| HinP1I | GCGC | 4 cut(s) | 496, 507, 599, 667 |
| HincII | GTYRAC | 1 cut(s) | 559 |
| HindII | GTYRAC | 1 cut(s) | 559 |
| HinfI | GANTC | 8 cut(s) | 77, 136, 446, 458, 560, 692, 871, 928 |
| HpaII | CCGG | 8 cut(s) | 289, 423, 567, 615, 806, 975, 986, 1140 |
| HphI | GGTGA | 3 cut(s) | 228, 577, 862 |
| Hpy166II | GTNNAC | 3 cut(s) | 9, 559, 789 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 457, 876, 933 |
| Hpy188III | TCNNGA | 3 cut(s) | 537, 832, 1010 |
| Hpy8I | GTNNAC | 3 cut(s) | 9, 559, 789 |
| Hpy99I | CGWCG | 7 cut(s) | 154, 413, 716, 719, 901, 919, 928 |
| HpyAV | CCTTC | 6 cut(s) | 97, 258, 357, 400, 1097, 1124 |
| HpyCH4III | ACNGT | 1 cut(s) | 760 |
| HpyCH4IV | ACGT | 2 cut(s) | 714, 819 |
| HpyCH4V | TGCA | 3 cut(s) | 483, 756, 1161 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 212, 366, 504, 598, 717, 778, 802 |
| HpyF3I | CTNAG | 1 cut(s) | 938 |
| HpySE526I | ACGT | 2 cut(s) | 714, 819 |
| Hsp92I | GRCGYC | 2 cut(s) | 152, 714 |
| Hsp92II | CATG | 2 cut(s) | 135, 580 |
| HspAI | GCGC | 4 cut(s) | 496, 507, 599, 667 |
| Kzo9I | GATC | 3 cut(s) | 121, 191, 675 |
| LguI | GCTCTTC | 1 cut(s) | 752 |
| LmnI | GCTCC | 6 cut(s) | 369, 401, 530, 551, 732, 774 |
| Lsp1109I | GCAGC | 5 cut(s) | 193, 681, 756, 793, 876 |
| LweI | GCATC | 1 cut(s) | 972 |
| MaeI | CTAG | 2 cut(s) | 12, 36 |
| MaeII | ACGT | 2 cut(s) | 714, 819 |
| MalI | GATC | 3 cut(s) | 123, 193, 677 |
| MbiI | CCGCTC | 1 cut(s) | 396 |
| MboI | GATC | 3 cut(s) | 121, 191, 675 |
| MboII | GAAGA | 6 cut(s) | 72, 93, 159, 331, 691, 739 |
| MfeI | CAATTG | 1 cut(s) | 1096 |
| MhlI | GDGCHC | 3 cut(s) | 594, 779, 923 |
| MluCI | AATT | 2 cut(s) | 638, 1096 |
| MluI | ACGCGT | 1 cut(s) | 571 |
| MlyI | GAGTC | 6 cut(s) | 86, 145, 440, 452, 554, 701 |
| MmeI | TCCRAC | 1 cut(s) | 480 |
| MroXI | GAANNNNTTC | 2 cut(s) | 746, 1134 |
| MseI | TTAA | 1 cut(s) | 999 |
| MspA1I | CMGCKG | 3 cut(s) | 206, 360, 630 |
| MspI | CCGG | 8 cut(s) | 289, 423, 567, 615, 806, 975, 986, 1140 |
| MspR9I | CCNGG | 6 cut(s) | 532, 680, 976, 1140, 1141, 1183 |
| MunI | CAATTG | 1 cut(s) | 1096 |
| MvaI | CCWGG | 3 cut(s) | 532, 680, 1183 |
| MvnI | CGCG | 8 cut(s) | 149, 496, 507, 509, 573, 599, 667, 844 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 212, 366, 504, 598, 717, 778, 802 |
| NciI | CCSGG | 3 cut(s) | 976, 1140, 1141 |
| NcoI | CCATGG | 1 cut(s) | 131 |
| NdeII | GATC | 3 cut(s) | 121, 191, 675 |
| NlaIII | CATG | 2 cut(s) | 135, 580 |
| NlaIV | GGNNCC | 4 cut(s) | 365, 526, 547, 734 |
| NmeAIII | GCCGAG | 1 cut(s) | 501 |
| NspV | TTCGAA | 1 cut(s) | 764 |
| PciSI | GCTCTTC | 1 cut(s) | 752 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 708, 756, 911, 920, 923 |
| PdmI | GAANNNNTTC | 2 cut(s) | 746, 1134 |
| PfeI | GAWTC | 2 cut(s) | 871, 928 |
| PleI | GAGTC | 6 cut(s) | 85, 144, 440, 452, 554, 700 |
| PpsI | GAGTC | 6 cut(s) | 85, 144, 440, 452, 554, 700 |
| Psp124BI | GAGCTC | 2 cut(s) | 594, 779 |
| Psp6I | CCWGG | 3 cut(s) | 530, 678, 1181 |
| PspFI | CCCAGC | 2 cut(s) | 516, 957 |
| PspGI | CCWGG | 3 cut(s) | 530, 678, 1181 |
| PspN4I | GGNNCC | 4 cut(s) | 365, 526, 547, 734 |
| PspPI | GGNCC | 2 cut(s) | 441, 580 |
| SacI | GAGCTC | 2 cut(s) | 594, 779 |
| SapI | GCTCTTC | 1 cut(s) | 752 |
| SaqAI | TTAA | 1 cut(s) | 999 |
| Sau3AI | GATC | 3 cut(s) | 121, 191, 675 |
| Sau96I | GGNCC | 2 cut(s) | 441, 580 |
| SchI | GAGTC | 6 cut(s) | 86, 145, 440, 452, 554, 701 |
| ScrFI | CCNGG | 6 cut(s) | 532, 680, 976, 1140, 1141, 1183 |
| SduI | GDGCHC | 3 cut(s) | 594, 779, 923 |
| SfaNI | GCATC | 1 cut(s) | 972 |
| SfuI | TTCGAA | 1 cut(s) | 764 |
| SinI | GGWCC | 1 cut(s) | 580 |
| SmaI | CCCGGG | 1 cut(s) | 1141 |
| Sse9I | AATT | 2 cut(s) | 638, 1096 |
| SspMI | CTAG | 2 cut(s) | 12, 36 |
| SstI | GAGCTC | 2 cut(s) | 594, 779 |
| StyD4I | CCNGG | 6 cut(s) | 530, 678, 974, 1138, 1139, 1181 |
| StyI | CCWWGG | 1 cut(s) | 131 |
| TaaI | ACNGT | 1 cut(s) | 760 |
| TaiI | ACGT | 2 cut(s) | 717, 822 |
| TaqI | TCGA | 6 cut(s) | 342, 378, 764, 923, 945, 1176 |
| TaqII | GACCGA | 1 cut(s) | 685 |
| TasI | AATT | 2 cut(s) | 638, 1096 |
| TauI | GCSGC | 6 cut(s) | 206, 501, 599, 667, 686, 844 |
| TfiI | GAWTC | 2 cut(s) | 871, 928 |
| Tru1I | TTAA | 1 cut(s) | 999 |
| Tru9I | TTAA | 1 cut(s) | 999 |
| TscAI | CASTG | 2 cut(s) | 743, 791 |
| TseI | GCWGC | 5 cut(s) | 206, 669, 769, 781, 864 |
| TspDTI | ATGAA | 2 cut(s) | 54, 72 |
| TspGWI | ACGGA | 1 cut(s) | 538 |
| TspMI | CCCGGG | 1 cut(s) | 1139 |
| TspRI | CASTG | 2 cut(s) | 743, 791 |
| VpaK11BI | GGWCC | 1 cut(s) | 580 |
| XapI | RAATTY | 1 cut(s) | 638 |
| XmaI | CCCGGG | 1 cut(s) | 1139 |
| XmnI | GAANNNNTTC | 2 cut(s) | 746, 1134 |
| XspI | CTAG | 2 cut(s) | 12, 36 |
| ZraI | GACGTC | 1 cut(s) | 715 |