Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001989

Physical Location & Seq

Genomic Coordinates Reverse (-)

45334096 .. 45339053

Gene Structure 4958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0302000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGTCGCGGGGACGAGCTGATGGGGGCTCAAAGAAGCGTTTGGTCACCTCAGTTCTAATTTTGGTGATTATTTGTGGTGGGTTGTACATGTATACTAAAAGAAATGGTTCCACCGCTTTGGAGTATAGCAGTAAAATAAGAAAATTTGGTTCTACTTACTTGGGTGGGGATGAAGAGGTTGACGAGACACCTCCCAAACTTGGTGAAGATGAAGATGATGGTGTTATACTGAAGAGCATACCAGTTTGTGATGATAGACATTCAGAATTAATTCCTTGCTTAGACAGAAACCTTATTTACCAGACAAGGTTGAAGTTGGATCTGTCTTTGATGGAACATTATGAGAGACACTGCCCTGCGCCTGAAAGGCGATTTAACTGTTTAATTCCTCCCCCACCTGGATACAAGATCCCCATCAAGTGGCCTAAAAGCAGAGATGAGGTATGGAAAGCAAATATACCTCATACTCACCTTGCAAAAGAGAAGTCTGACCAAAAGTGGATGGTTGTCAAAGGTGAAAAGATTGGATTTCCTGGAGGAGGTACTCACTTTCATTATGGAGCTGATAAGTACATCGCAGCAATGGCTAATATGCTCAACTTTCCTAAGAATAATTTAAACAATGAGGGAAATCTTCGGACAGTCCTTGATGTTGGCTGTGGTGTTGCTAGTTTTGGAGGTTACCTGTTGTCTTCAGATATCCTTACAATGTCCTTGGCACCTAATGATGTCCATCAAAATCAGATCCAGTTTGCTTTAGAAAGAGGAATTCCTGCATATCTTGGTGTTCTAGGGACAAAGAGACTCCCTTACCCAAGTCGATCTTTTGAACTGGCACATTGTTCTCGCTGTAGGATTGACTGGCTTCAAAGGGATGGGATACTTCTCCTTGAGCTAGATAGGGTACTCAGACCAGGAGGCTATTTTGCCTACTCATCTCCCGAAGCCTATGCACAGGATGAGGAGGATCTGAGAATATGGAAGGAGATGAGTGCCCTTGTGGAACGGATGTGTTGGAAAATAGCTGCTAAAAAGAACCAAACTGTTATTTGGGAAAAGCCCATGACTAATGATTGTTACATGGCAAGAGAGCCTGGAACTCGACCTCCGCTTTGTAAATCGGATGCTGATCCAGATGCCACCTGGGATGTGAAAATGGAGGCTTGCATCACTCCATACACTGAACAAATTCAGAGAGCAAGGGGAAGTGGTTTGGCTCCTTGGCCTGCTCGATTGACAACACCTCCTCCCCGTCTTACTGACTTTGGCTATTCTGCTGATGTATTTGAAAAGGACATGGAAGTATGGCAGCAAAGAGTTGACAATTACTGGAATCTTTTGAGCCCAAAGATTAGTCCTGACACAGTGAGAAATGTGATGGACATGAAGGCACACATGGGTTCATTTGCCGCTTCTTTAAGGAACAAACCTGTTTGGGTTATGAATGTGGTGCCAGAAGACGGACCTAACACACTGAAAATAATATATGATAGAGGCCTAATAGGCTCAATACACAGCTGGTGTGAAGCCTACTCAACCTACCCGAGAACTTATGATCTACTTCATGCTTGGACTGTCTTCTCTGATGTTGAAAGGAAAGGATGTAGTGCCGTTGACTTGATGGTTGAGATGGATCGCATCCTCCGGCCCAAAGGTTTCATCATTGTCCGTGATAAGCCGAAGGTAGTGGAGTACATTAAAAAATACATGAAGGCATTACACTGGGAAGCAGTGGCTAGTGCTGATGCAGACCAAGATGAGGATGATGCAGTGTTGATTATCCAGAAAAAGATTTGGCGTACAAGCGAGAGCGTTAGGGAGTTAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009705 GO:0010029 GO:0010030 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0033500 GO:0034219 GO:0034220 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0048518 GO:0048580 GO:0048582 GO:0048878 GO:0050789 GO:0050793 GO:0051094 GO:0051119 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0055085 GO:0065007 GO:0065008 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1900140 GO:1902600 GO:1904659 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

609

Amino Acids

69.31

Weight (kDa)

6.9

Isoelectric Point (pI)

37.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	89 - 596	3.9e-229	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	216 - 310	4.8e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19450 AT1G75220
fragaria_vesca	FvH4_2g39720 FvH4_2g39720
malus_domestica	MD08G1030900.v1.1 MD15G1026400.v1.1
prunus_persica	Prupe.1G378500_v2.0.a1 Prupe.1G378500_v2.0.a1 Prupe.1G378500_v2.0.a1
pyrus_communis	pycom08g02430 pycom15g02240
rosa_chinensis	RchiOBHm_Chr2g0113321 RchiOBHm_Chr6g0286231 RchiOBHm_Chr6g0301141
rosa_laevigata	RLG00000011274 RLG00000023030 RLG00000029784
rosa_multiflora	Rmu_sc0000163.1_g000001 Rmu_sc0003433.1_g000002
rosa_roxburghii	Rroxscaffold_172G00445490 Rroxscaffold_1G00005260 Rroxscaffold_2G00122730 Rroxscaffold_6G00422220 Rroxscaffold_7G00167120
rosa_rugosa	Rorug02G0291400 Rorug06G0302000
rosa_samantha	Rh1CG067500 Rh1DG072300 Rh2BG617500 Rh2CG245100 Rh3DG215300 Rh4AG195000 Rh4BG151200 Rh5DG350800 Rh6AG287900 Rh6AG415200 Rh6BG422100 Rh6CG295000 Rh6CG429700 Rh6DG287000 Rh6DG415000 Rh7DG331600
rosa_wichuraiana	Rw3G027690 Rw4G014840 Rw5G039560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	718, 1450
AccB7I	CCANNNNNTGG	1 cut(s)	420
AccI	GTMKAC	1 cut(s)	92
AccII	CGCG	1 cut(s)	7
AciI	CCGC	4 cut(s)	7, 114, 1109, 1410
AclWI	GGATC	6 cut(s)	327, 403, 739, 975, 1124, 1641
AcsI	RAATTY	3 cut(s)	143, 768, 1188
AcuI	CTGAAG	2 cut(s)	251, 678
AfaI	GTAC	6 cut(s)	86, 544, 572, 906, 1694, 1801
AfiI	CCNNNNNNNGG	6 cut(s)	200, 398, 420, 539, 1460, 1759
AflIII	ACRYGT	1 cut(s)	87
AgsI	TTSAA	5 cut(s)	313, 830, 869, 1289, 1592
AjnI	CCWGG	5 cut(s)	397, 532, 913, 1093, 1142
AloI	GAACNNNNNNTCC	2 cut(s)	1090, 1122
AluBI	AGCT	5 cut(s)	17, 563, 895, 1025, 1518
AluI	AGCT	5 cut(s)	17, 563, 895, 1025, 1518
Alw26I	GTCTC	3 cut(s)	179, 340, 796
AlwI	GGATC	6 cut(s)	327, 403, 739, 975, 1124, 1641
Ama87I	CYCGRG	1 cut(s)	1543
AoxI	GGCC	4 cut(s)	422, 1223, 1495, 1646
ApeKI	GCWGC	3 cut(s)	578, 1025, 1309
ApoI	RAATTY	3 cut(s)	143, 768, 1188
ArsI	GACNNNNNNTTYG	4 cut(s)	470, 502, 1095, 1127
AseI	ATTAAT	1 cut(s)	269
Asp700I	GAANNNNTTC	3 cut(s)	106, 270, 1188
AspLEI	GCGC	1 cut(s)	361
AspS9I	GGNCC	2 cut(s)	1463, 1647
AsuHPI	GGTGA	5 cut(s)	37, 76, 215, 461, 527
AvaI	CYCGRG	1 cut(s)	1543
AvaII	GGWCC	1 cut(s)	1463
BaeGI	GKGCMC	1 cut(s)	997
BanI	GGYRCC	2 cut(s)	718, 1450
BanII	GRGCYC	2 cut(s)	29, 1346
BbsI	GAAGAC	3 cut(s)	684, 1464, 1570
BbvI	GCAGC	3 cut(s)	590, 1012, 1321
BceAI	ACGGC	1 cut(s)	1595
BcgI	CGANNNNNNTGC	2 cut(s)	932, 966
BciT130I	CCWGG	5 cut(s)	399, 534, 915, 1095, 1144
BciVI	GTATCC	2 cut(s)	395, 873
BcoDI	GTCTC	3 cut(s)	179, 340, 796
BfaI	CTAG	4 cut(s)	669, 791, 896, 1737
BfmI	CTRYAG	1 cut(s)	850
BfuI	GTATCC	2 cut(s)	395, 873
BglI	GCCNNNNNGGC	2 cut(s)	367, 1503
BisI	GCNGC	4 cut(s)	579, 1026, 1310, 1410
BlsI	GCNGC	4 cut(s)	580, 1027, 1311, 1411
Bme1390I	CCNGG	5 cut(s)	399, 534, 915, 1095, 1144
Bme18I	GGWCC	1 cut(s)	1463
BmeT110I	CYCGRG	1 cut(s)	1543
BmgT120I	GGNCC	2 cut(s)	1463, 1647
BmiI	GGNNCC	4 cut(s)	109, 720, 1218, 1452
BmrFI	CCNGG	5 cut(s)	399, 534, 915, 1095, 1144
BmrI	ACTGGG	1 cut(s)	1732
BmsI	GCATC	6 cut(s)	1114, 1126, 1176, 1647, 1735, 1756
BmuI	ACTGGG	1 cut(s)	1732
BpiI	GAAGAC	3 cut(s)	684, 1464, 1570
BpmI	CTGGAG	1 cut(s)	555
BpuEI	CTTGAG	1 cut(s)	911
BsaBI	GATNNNNATC	3 cut(s)	413, 732, 1128
BsaJI	CCNNGG	3 cut(s)	714, 1143, 1220
BsaXI	ACNNNNNCTCC	6 cut(s)	1090, 1120, 1228, 1231, 1258, 1261
Bsc4I	CCNNNNNNNGG	6 cut(s)	200, 398, 420, 539, 1460, 1759
Bse1I	ACTGG	6 cut(s)	242, 748, 837, 866, 1334, 1727
Bse3DI	GCAATG	1 cut(s)	588
Bse8I	GATNNNNATC	3 cut(s)	413, 732, 1128
BseBI	CCWGG	5 cut(s)	399, 534, 915, 1095, 1144
BseDI	CCNNGG	3 cut(s)	714, 1143, 1220
BseJI	GATNNNNATC	3 cut(s)	413, 732, 1128
BseLI	CCNNNNNNNGG	6 cut(s)	200, 398, 420, 539, 1460, 1759
BseMI	GCAATG	1 cut(s)	588
BseMII	CTCAG	3 cut(s)	63, 922, 962
BseNI	ACTGG	6 cut(s)	242, 748, 837, 866, 1334, 1727
BseRI	GAGGAG	3 cut(s)	552, 977, 1236
BseSI	GKGCMC	1 cut(s)	997
BseXI	GCAGC	3 cut(s)	590, 1012, 1321
Bsh1236I	CGCG	1 cut(s)	7
BshFI	GGCC	4 cut(s)	424, 1225, 1497, 1648
BshNI	GGYRCC	2 cut(s)	718, 1450
BsiHKCI	CYCGRG	1 cut(s)	1543
BsiSI	CCGG	1 cut(s)	1645
BslFI	GGGAC	2 cut(s)	24, 808
BslI	CCNNNNNNNGG	6 cut(s)	200, 398, 420, 539, 1460, 1759
BsmAI	GTCTC	3 cut(s)	179, 340, 796
BsmFI	GGGAC	2 cut(s)	24, 808
BsnI	GGCC	4 cut(s)	424, 1225, 1497, 1648
BsoBI	CYCGRG	1 cut(s)	1543
Bsp1286I	GDGCHC	3 cut(s)	29, 997, 1346
Bsp1407I	TGTACA	1 cut(s)	84
Bsp143I	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
BspACI	CCGC	4 cut(s)	7, 114, 1109, 1410
BspANI	GGCC	4 cut(s)	424, 1225, 1497, 1648
BspCNI	CTCAG	3 cut(s)	62, 921, 963
BspFNI	CGCG	1 cut(s)	7
BspLI	GGNNCC	4 cut(s)	109, 720, 1218, 1452
BspPI	GGATC	6 cut(s)	327, 403, 739, 975, 1124, 1641
BspQI	GCTCTTC	1 cut(s)	227
BspT107I	GGYRCC	2 cut(s)	718, 1450
BsrDI	GCAATG	1 cut(s)	588
BsrGI	TGTACA	1 cut(s)	84
BsrI	ACTGG	6 cut(s)	242, 748, 837, 866, 1334, 1727
BssECI	CCNNGG	3 cut(s)	714, 1143, 1220
BssMI	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
BssNAI	GTATAC	1 cut(s)	93
BssT1I	CCWWGG	2 cut(s)	714, 1220
Bst1107I	GTATAC	1 cut(s)	93
Bst2UI	CCWGG	5 cut(s)	399, 534, 915, 1095, 1144
Bst4CI	ACNGT	5 cut(s)	380, 643, 1045, 1366, 1576
Bst6I	CTCTTC	2 cut(s)	168, 227
BstAUI	TGTACA	1 cut(s)	84
BstC8I	GCNNGC	2 cut(s)	1165, 1227
BstDEI	CTNAG	5 cut(s)	49, 280, 606, 908, 971
BstEII	GGTNACC	2 cut(s)	43, 680
BstENI	CCTNNNNNAGG	1 cut(s)	537
BstFNI	CGCG	1 cut(s)	7
BstHHI	GCGC	1 cut(s)	361
BstKTI	GATC	8 cut(s)	322, 411, 747, 824, 970, 1132, 1558, 1636
BstMAI	GTCTC	3 cut(s)	179, 340, 796
BstMBI	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
BstMWI	GCNNNNNNNGC	3 cut(s)	367, 584, 1503
BstNI	CCWGG	5 cut(s)	399, 534, 915, 1095, 1144
BstNSI	RCATGY	1 cut(s)	91
BstPI	GGTNACC	2 cut(s)	43, 680
BstSCI	CCNGG	5 cut(s)	397, 532, 913, 1093, 1142
BstSFI	CTRYAG	1 cut(s)	850
BstSLI	GKGCMC	1 cut(s)	997
BstUI	CGCG	1 cut(s)	7
BstV1I	GCAGC	3 cut(s)	590, 1012, 1321
BstV2I	GAAGAC	3 cut(s)	684, 1464, 1570
BstX2I	RGATCY	4 cut(s)	319, 408, 744, 967
BstXI	CCANNNNNNTGG	1 cut(s)	118
BstYI	RGATCY	4 cut(s)	319, 408, 744, 967
BstZ17I	GTATAC	1 cut(s)	93
BsuI	GTATCC	2 cut(s)	395, 873
BsuRI	GGCC	4 cut(s)	424, 1225, 1497, 1648
BtgZI	GCGATG	1 cut(s)	559
BtsI	GCAGTG	3 cut(s)	349, 1737, 1776
BtsIMutI	CAGTG	7 cut(s)	349, 1179, 1371, 1472, 1720, 1737, 1776
Cac8I	GCNNGC	2 cut(s)	1165, 1227
CfoI	GCGC	1 cut(s)	361
Cfr13I	GGNCC	2 cut(s)	1463, 1647
Csp6I	GTAC	6 cut(s)	85, 543, 571, 905, 1693, 1800
CviAII	CATG	8 cut(s)	88, 1063, 1081, 1297, 1384, 1396, 1565, 1708
CviQI	GTAC	6 cut(s)	85, 543, 571, 905, 1693, 1800
DdeI	CTNAG	5 cut(s)	49, 280, 606, 908, 971
DpnI	GATC	8 cut(s)	321, 410, 746, 823, 969, 1131, 1557, 1635
DpnII	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
DraI	TTTAAA	1 cut(s)	618
Eam1104I	CTCTTC	2 cut(s)	168, 227
EarI	CTCTTC	2 cut(s)	168, 227
Eco130I	CCWWGG	2 cut(s)	714, 1220
Eco147I	AGGCCT	1 cut(s)	1497
Eco24I	GRGCYC	2 cut(s)	29, 1346
Eco32I	GATATC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	1463
Eco57I	CTGAAG	2 cut(s)	251, 678
Eco88I	CYCGRG	1 cut(s)	1543
Eco91I	GGTNACC	2 cut(s)	43, 680
EcoNI	CCTNNNNNAGG	1 cut(s)	537
EcoO65I	GGTNACC	2 cut(s)	43, 680
EcoRI	GAATTC	1 cut(s)	768
EcoRII	CCWGG	5 cut(s)	397, 532, 913, 1093, 1142
EcoRV	GATATC	1 cut(s)	700
EcoT14I	CCWWGG	2 cut(s)	714, 1220
EcoT38I	GRGCYC	2 cut(s)	29, 1346
ErhI	CCWWGG	2 cut(s)	714, 1220
FaeI	CATG	8 cut(s)	91, 1066, 1084, 1300, 1387, 1399, 1568, 1711
FalI	AAGNNNNNCTT	2 cut(s)	808, 840
FaqI	GGGAC	2 cut(s)	24, 808
FatI	CATG	8 cut(s)	87, 1062, 1080, 1296, 1383, 1395, 1564, 1707
FblI	GTMKAC	1 cut(s)	92
Fnu4HI	GCNGC	4 cut(s)	579, 1026, 1310, 1410
FriOI	GRGCYC	2 cut(s)	29, 1346
Fsp4HI	GCNGC	4 cut(s)	579, 1026, 1310, 1410
FspBI	CTAG	4 cut(s)	669, 791, 896, 1737
GlaI	GCGC	1 cut(s)	360
GluI	GCNGC	4 cut(s)	579, 1026, 1310, 1410
GsuI	CTGGAG	1 cut(s)	555
HaeIII	GGCC	4 cut(s)	424, 1225, 1497, 1648
HapII	CCGG	1 cut(s)	1645
HhaI	GCGC	1 cut(s)	361
Hin1II	CATG	8 cut(s)	91, 1066, 1084, 1300, 1387, 1399, 1568, 1711
Hin6I	GCGC	1 cut(s)	359
HinP1I	GCGC	1 cut(s)	359
HincII	GTYRAC	3 cut(s)	181, 1321, 1615
HindII	GTYRAC	3 cut(s)	181, 1321, 1615
HinfI	GANTC	2 cut(s)	804, 1333
HpaII	CCGG	1 cut(s)	1645
HphI	GGTGA	5 cut(s)	37, 76, 215, 461, 527
Hpy166II	GTNNAC	4 cut(s)	93, 181, 1321, 1615
Hpy188III	TCNNGA	4 cut(s)	941, 1133, 1358, 1783
Hpy8I	GTNNAC	4 cut(s)	93, 181, 1321, 1615
HpyAV	CCTTC	4 cut(s)	976, 1381, 1675, 1705
HpyCH4III	ACNGT	5 cut(s)	380, 643, 1045, 1366, 1576
HpyCH4V	TGCA	6 cut(s)	476, 776, 953, 1167, 1748, 1769
HpyF10VI	GCNNNNNNNGC	3 cut(s)	367, 584, 1503
HpyF3I	CTNAG	5 cut(s)	49, 280, 606, 908, 971
Hsp92II	CATG	8 cut(s)	91, 1066, 1084, 1300, 1387, 1399, 1568, 1711
HspAI	GCGC	1 cut(s)	359
Kzo9I	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
LguI	GCTCTTC	1 cut(s)	227
LmnI	GCTCC	2 cut(s)	560, 1222
Lsp1109I	GCAGC	3 cut(s)	590, 1012, 1321
LweI	GCATC	6 cut(s)	1114, 1126, 1176, 1647, 1735, 1756
MaeI	CTAG	4 cut(s)	669, 791, 896, 1737
MaeIII	GTNAC	3 cut(s)	43, 680, 1076
MalI	GATC	8 cut(s)	321, 410, 746, 823, 969, 1131, 1557, 1635
MboI	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
MboII	GAAGA	8 cut(s)	185, 218, 224, 244, 626, 684, 1469, 1570
MflI	RGATCY	4 cut(s)	319, 408, 744, 967
MhlI	GDGCHC	3 cut(s)	29, 997, 1346
MluCI	AATT	9 cut(s)	57, 143, 266, 270, 384, 613, 768, 1188, 1324
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	2 cut(s)	297, 995
MroXI	GAANNNNTTC	3 cut(s)	106, 270, 1188
MseI	TTAA	6 cut(s)	269, 375, 383, 617, 1418, 1698
MspA1I	CMGCKG	1 cut(s)	1518
MspI	CCGG	1 cut(s)	1645
MspR9I	CCNGG	5 cut(s)	399, 534, 915, 1095, 1144
MvaI	CCWGG	5 cut(s)	399, 534, 915, 1095, 1144
MvnI	CGCG	1 cut(s)	7
MwoI	GCNNNNNNNGC	3 cut(s)	367, 584, 1503
NdeII	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
NlaIII	CATG	8 cut(s)	91, 1066, 1084, 1300, 1387, 1399, 1568, 1711
NlaIV	GGNNCC	4 cut(s)	109, 720, 1218, 1452
NmuCI	GTSAC	1 cut(s)	43
NspI	RCATGY	1 cut(s)	91
PceI	AGGCCT	1 cut(s)	1497
PciI	ACATGT	1 cut(s)	87
PciSI	GCTCTTC	1 cut(s)	227
PdmI	GAANNNNTTC	3 cut(s)	106, 270, 1188
PfeI	GAWTC	1 cut(s)	1333
PflMI	CCANNNNNTGG	1 cut(s)	420
PfoI	TCCNGGA	1 cut(s)	532
PkrI	GCNGC	4 cut(s)	580, 1027, 1311, 1411
PleI	GAGTC	1 cut(s)	798
PpsI	GAGTC	1 cut(s)	798
PscI	ACATGT	1 cut(s)	87
PshBI	ATTAAT	1 cut(s)	269
Psp6I	CCWGG	5 cut(s)	397, 532, 913, 1093, 1142
PspEI	GGTNACC	2 cut(s)	43, 680
PspGI	CCWGG	5 cut(s)	397, 532, 913, 1093, 1142
PspN4I	GGNNCC	4 cut(s)	109, 720, 1218, 1452
PspPI	GGNCC	2 cut(s)	1463, 1647
PsuI	RGATCY	4 cut(s)	319, 408, 744, 967
PvuII	CAGCTG	1 cut(s)	1518
RsaI	GTAC	6 cut(s)	86, 544, 572, 906, 1694, 1801
RsaNI	GTAC	6 cut(s)	85, 543, 571, 905, 1693, 1800
SapI	GCTCTTC	1 cut(s)	227
SaqAI	TTAA	6 cut(s)	269, 375, 383, 617, 1418, 1698
SatI	GCNGC	4 cut(s)	579, 1026, 1310, 1410
Sau3AI	GATC	8 cut(s)	319, 408, 744, 821, 967, 1129, 1555, 1633
Sau96I	GGNCC	2 cut(s)	1463, 1647
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	5 cut(s)	399, 534, 915, 1095, 1144
SduI	GDGCHC	3 cut(s)	29, 997, 1346
SfaNI	GCATC	6 cut(s)	1114, 1126, 1176, 1647, 1735, 1756
SfcI	CTRYAG	1 cut(s)	850
SinI	GGWCC	1 cut(s)	1463
SmlI	CTYRAG	1 cut(s)	890
SmoI	CTYRAG	1 cut(s)	890
Sse9I	AATT	9 cut(s)	57, 143, 266, 270, 384, 613, 768, 1188, 1324
SseBI	AGGCCT	1 cut(s)	1497
SsiI	CCGC	4 cut(s)	7, 114, 1109, 1410
SspMI	CTAG	4 cut(s)	669, 791, 896, 1737
StuI	AGGCCT	1 cut(s)	1497
StyD4I	CCNGG	5 cut(s)	397, 532, 913, 1093, 1142
StyI	CCWWGG	2 cut(s)	714, 1220
TaaI	ACNGT	5 cut(s)	380, 643, 1045, 1366, 1576
TaqI	TCGA	3 cut(s)	820, 1102, 1231
TasI	AATT	9 cut(s)	57, 143, 266, 270, 384, 613, 768, 1188, 1324
TatI	WGTACW	3 cut(s)	84, 570, 1692
TauI	GCSGC	1 cut(s)	1412
TfiI	GAWTC	1 cut(s)	1333
Tru1I	TTAA	6 cut(s)	269, 375, 383, 617, 1418, 1698
Tru9I	TTAA	6 cut(s)	269, 375, 383, 617, 1418, 1698
TscAI	CASTG	7 cut(s)	356, 1186, 1371, 1479, 1727, 1737, 1776
TseFI	GTSAC	1 cut(s)	43
TseI	GCWGC	3 cut(s)	578, 1025, 1309
Tsp45I	GTSAC	1 cut(s)	43
TspDTI	ATGAA	9 cut(s)	186, 225, 542, 1392, 1400, 1457, 1553, 1648, 1724
TspGWI	ACGGA	3 cut(s)	1021, 1476, 1658
TspRI	CASTG	7 cut(s)	356, 1186, 1371, 1479, 1727, 1737, 1776
Van91I	CCANNNNNTGG	1 cut(s)	420
VpaK11BI	GGWCC	1 cut(s)	1463
VspI	ATTAAT	1 cut(s)	269
XagI	CCTNNNNNAGG	1 cut(s)	537
XapI	RAATTY	3 cut(s)	143, 768, 1188
XceI	RCATGY	1 cut(s)	91
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1140
XmiI	GTMKAC	1 cut(s)	92
XmnI	GAANNNNTTC	3 cut(s)	106, 270, 1188
XspI	CTAG	4 cut(s)	669, 791, 896, 1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.