AT1G19450
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6731411 .. 6735024
3614 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19450.1

Sequence Viewer

Length: 1467 bp
ATGAGTTTTAGGGATGATAATACGGAAGAGGGAAGAAATGATCTTCGGCGACCGTTCTTACACACAGGAAGTTGGTATCGGATGGGTTCGAGACAATCTAGTATGTTGGAATCGTCTCAAGTTATTCGAGACAGCTCAATTTCTGTCTTAGCTTGTGTTTTGATTGTTGCTCTTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCCTCACCAACTCAAGCTGCCATTACTAAGGATCTTGGTTTAACTGTATCAGAGTACTCTGTGTTTGGGTCTCTATCCAATGTGGGTGCTATGGTTGGAGCAATTGCGAGTGGTCAGATTGCTGAATACGTTGGACGGAAAGGGTCTCTGATGATTGCTGCAATTCCCAATATTATTGGATGGCTTTCGATATCATTTGCAAAAGATACTTCTTTTCTTTACATGGGAAGATTGTTAGAAGGCTTCGGAGTTGGGATTATCTCCTATACGGTTCCCGTATATATAGCTGAGATCGCTCCACAGACCATGAGAGGAGCCTTAGGTTCAGTTAACCAGCTTTCTGTAACAATTGGGATAATGCTGGCGTATTTACTCGGTCTCTTTGTTCCATGGAGAATTCTTGCAGTTTTGGGAGTATTGCCATGTACATTGTTGATACCGGGTCTTTTTTTCATTCCTGAATCTCCTCGGTGGTTGGCAAAGATGGGTTTGACAGATGATTTCGAAACTTCATTGCAAGTTCTTCGTGGATTTGAGACTGATATTACCGTTGAGGTTAATGAAATCAAGAGATCTGTGGCATCATCTAGCAAACGTTCTGCAGTTCGGTTTGTAGACCTCAAGCGCAGGAGATACTATTTCCCACTGATGGTTGGTATAGGGCTGCTTGCACTTCAACAACTTGGAGGAATCAATGGTGTCTTGTTCTATTCGAGTACAATTTTTGAATCTGCAGGGGTGACATCAAGTAATGTGGCGACATTTGGAGTTGGCGTTGTTCAGGTAGTGGCGACTGGGATAGCGACATGGTTGGTGGATAAAGCAGGTCGTCGGCTTCTACTCATGATCTCTTCTATCGGAATGACGATAAGCCTCGTGATTGTAGCAGTTGCATTTTACCTTAAGGAATTTGTATCACCTGATTCCAACATGTACAACATTCTAAGCATGGTTTCCGTAGTTGGAGTTGTGGCTATGGTTATTTCTTGCTCTCTAGGAATGGGACCAATTCCATGGCTGATTATGTCTGAGATTCTGCCAGTGAATATAAAGGGTTTAGCCGGAAGTATAGCAACTTTGTTAAACTGGTTCGTGTCATGGTTAGTGACAATGACTGCAAATATGCTGTTAGCATGGAGCAGTGGGGGAACTTTCACTCTCTACGCTTTGGTTTGTGGATTCACTGTGGTTTTTGTGAGTCTTTGGGTTCCTGAGACTAAAGGAAAAACGCTTGAAGAGATCCAAGCTTTGTTCAGATGA

Protein Analysis

488

Amino Acids

52.79

Weight (kDa)

8.72

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 53 - 487 2.4e-96 Sugar (and other) transporter
MFS_1 PF07690 64 - 432 1.7e-22 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1022
AccI GTMKAC 1 cut(s) 822
AclI AACGTT 1 cut(s) 802
AclWI GGATC 2 cut(s) 246, 1441
AcsI RAATTY 2 cut(s) 603, 1115
AfaI GTAC 4 cut(s) 263, 634, 925, 1142
AfiI CCNNNNNNNGG 1 cut(s) 856
AflII CTTAAG 1 cut(s) 1109
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 4 cut(s) 185, 884, 935, 1442
AluBI AGCT 6 cut(s) 135, 152, 224, 494, 544, 1454
AluI AGCT 6 cut(s) 135, 152, 224, 494, 544, 1454
Alw26I GTCTC 8 cut(s) 85, 120, 123, 282, 357, 590, 737, 1415
AlwI GGATC 2 cut(s) 246, 1441
ApeKI GCWGC 3 cut(s) 224, 365, 871
ApoI RAATTY 2 cut(s) 603, 1115
AspLEI GCGC 1 cut(s) 834
AspS9I GGNCC 2 cut(s) 176, 1211
AsuC2I CCSGG 1 cut(s) 648
AsuHPI GGTGA 3 cut(s) 204, 958, 1116
AsuII TTCGAA 1 cut(s) 711
AvaII GGWCC 2 cut(s) 176, 1211
AxyI CCTNAGG 1 cut(s) 526
BauI CACGAG 1 cut(s) 1082
BbvI GCAGC 3 cut(s) 211, 352, 858
BccI CCATC 4 cut(s) 76, 381, 685, 850
BcgI CGANNNNNNTGC 2 cut(s) 713, 747
BcnI CCSGG 1 cut(s) 648
BcoDI GTCTC 8 cut(s) 85, 120, 123, 282, 357, 590, 737, 1415
BfaI CTAG 3 cut(s) 99, 795, 1202
BfmI CTRYAG 2 cut(s) 807, 939
BfrI CTTAAG 1 cut(s) 1109
BfuAI ACCTGC 1 cut(s) 1022
BglII AGATCT 1 cut(s) 779
BisI GCNGC 3 cut(s) 225, 366, 872
BlsI GCNGC 3 cut(s) 226, 367, 873
BmcAI AGTACT 1 cut(s) 263
Bme1390I CCNGG 1 cut(s) 648
Bme18I GGWCC 2 cut(s) 176, 1211
BmgT120I GGNCC 2 cut(s) 176, 1211
BmiI GGNNCC 4 cut(s) 480, 523, 1212, 1416
BmrFI CCNGG 1 cut(s) 648
BmrI ACTGGG 1 cut(s) 1011
BmsI GCATC 1 cut(s) 797
BmuI ACTGGG 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 3 cut(s) 102, 204, 812
BpuMI CCSGG 1 cut(s) 648
BsaI GGTCTC 3 cut(s) 282, 357, 590
BsaJI CCNNGG 3 cut(s) 596, 674, 1220
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 1 cut(s) 856
Bse1I ACTGG 3 cut(s) 1006, 1247, 1298
Bse21I CCTNAGG 1 cut(s) 526
Bse3DI GCAATG 1 cut(s) 719
BseDI CCNNGG 3 cut(s) 596, 674, 1220
BseGI GGATG 3 cut(s) 19, 87, 392
BseLI CCNNNNNNNGG 1 cut(s) 856
BseMI GCAATG 1 cut(s) 719
BseMII CTCAG 3 cut(s) 486, 1227, 1410
BseNI ACTGG 3 cut(s) 1006, 1247, 1298
BseRI GAGGAG 2 cut(s) 534, 663
BseXI GCAGC 3 cut(s) 211, 352, 858
Bsh1285I CGRYCG 1 cut(s) 53
BsiEI CGRYCG 1 cut(s) 53
BsiSI CCGG 2 cut(s) 647, 1269
BslFI GGGAC 1 cut(s) 1224
BslI CCNNNNNNNGG 1 cut(s) 856
BsmAI GTCTC 8 cut(s) 85, 120, 123, 282, 357, 590, 737, 1415
BsmBI CGTCTC 1 cut(s) 120
BsmFI GGGAC 1 cut(s) 1224
Bso31I GGTCTC 3 cut(s) 282, 357, 590
Bsp119I TTCGAA 1 cut(s) 711
Bsp1407I TGTACA 2 cut(s) 632, 1140
Bsp143I GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
Bsp19I CCATGG 2 cut(s) 596, 1220
BspCNI CTCAG 3 cut(s) 487, 1228, 1411
BspHI TCATGA 1 cut(s) 1050
BspLI GGNNCC 4 cut(s) 480, 523, 1212, 1416
BspMAI CTGCAG 2 cut(s) 811, 943
BspMI ACCTGC 1 cut(s) 1022
BspPI GGATC 2 cut(s) 246, 1441
BspT104I TTCGAA 1 cut(s) 711
BspTI CTTAAG 1 cut(s) 1109
BspTNI GGTCTC 3 cut(s) 282, 357, 590
BsrDI GCAATG 1 cut(s) 719
BsrGI TGTACA 2 cut(s) 632, 1140
BsrI ACTGG 3 cut(s) 1006, 1247, 1298
BssECI CCNNGG 3 cut(s) 596, 674, 1220
BssMI GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
BssSI CACGAG 1 cut(s) 1082
BssT1I CCWWGG 2 cut(s) 596, 1220
Bst2BI CACGAG 1 cut(s) 1082
Bst4CI ACNGT 5 cut(s) 54, 253, 478, 757, 1393
Bst6I CTCTTC 3 cut(s) 21, 1063, 1437
BstAFI CTTAAG 1 cut(s) 1109
BstAUI TGTACA 2 cut(s) 632, 1140
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 2 cut(s) 570, 876
BstDEI CTNAG 7 cut(s) 148, 234, 495, 526, 1151, 1236, 1419
BstDSI CCRYGG 2 cut(s) 596, 1220
BstF5I GGATG 3 cut(s) 19, 87, 392
BstHHI GCGC 1 cut(s) 834
BstKTI GATC 6 cut(s) 43, 241, 501, 782, 1056, 1449
BstMAI GTCTC 8 cut(s) 85, 120, 123, 282, 357, 590, 737, 1415
BstMBI GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
BstMCI CGRYCG 1 cut(s) 53
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstNSI RCATGY 1 cut(s) 1141
BstSCI CCNGG 1 cut(s) 646
BstSFI CTRYAG 2 cut(s) 807, 939
BstV1I GCAGC 3 cut(s) 211, 352, 858
BstX2I RGATCY 3 cut(s) 238, 779, 1446
BstXI CCANNNNNNTGG 1 cut(s) 1221
BstYI RGATCY 3 cut(s) 238, 779, 1446
Bsu36I CCTNAGG 1 cut(s) 526
BtgI CCRYGG 2 cut(s) 596, 1220
BtsCI GGATG 3 cut(s) 19, 87, 392
BtsI GCAGTG 1 cut(s) 1354
BtsIMutI CAGTG 4 cut(s) 851, 1254, 1354, 1389
BveI ACCTGC 1 cut(s) 1022
Cac8I GCNNGC 2 cut(s) 570, 876
CciI TCATGA 1 cut(s) 1050
CfoI GCGC 1 cut(s) 834
Cfr13I GGNCC 2 cut(s) 176, 1211
Csp6I GTAC 4 cut(s) 262, 633, 924, 1141
CspCI CAANNNNNGTGG 2 cut(s) 942, 977
CviQI GTAC 4 cut(s) 262, 633, 924, 1141
DdeI CTNAG 7 cut(s) 148, 234, 495, 526, 1151, 1236, 1419
DpnI GATC 6 cut(s) 42, 240, 500, 781, 1055, 1448
DpnII GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
Eam1104I CTCTTC 3 cut(s) 21, 1063, 1437
EarI CTCTTC 3 cut(s) 21, 1063, 1437
Eco130I CCWWGG 2 cut(s) 596, 1220
Eco31I GGTCTC 3 cut(s) 282, 357, 590
Eco32I GATATC 1 cut(s) 399
Eco47I GGWCC 2 cut(s) 176, 1211
Eco81I CCTNAGG 1 cut(s) 526
EcoRI GAATTC 1 cut(s) 603
EcoRV GATATC 1 cut(s) 399
EcoT14I CCWWGG 2 cut(s) 596, 1220
ErhI CCWWGG 2 cut(s) 596, 1220
Esp3I CGTCTC 1 cut(s) 120
FaqI GGGAC 1 cut(s) 1224
FblI GTMKAC 1 cut(s) 822
Fnu4HI GCNGC 3 cut(s) 225, 366, 872
FokI GGATG 3 cut(s) 26, 94, 399
Fsp4HI GCNGC 3 cut(s) 225, 366, 872
FspBI CTAG 3 cut(s) 99, 795, 1202
GlaI GCGC 1 cut(s) 833
GluI GCNGC 3 cut(s) 225, 366, 872
HapII CCGG 2 cut(s) 647, 1269
HhaI GCGC 1 cut(s) 834
Hin6I GCGC 1 cut(s) 832
HinP1I GCGC 1 cut(s) 832
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HindIII AAGCTT 1 cut(s) 1452
HinfI GANTC 9 cut(s) 110, 192, 668, 897, 935, 1130, 1240, 1386, 1405
HpaI GTTAAC 1 cut(s) 538
HpaII CCGG 2 cut(s) 647, 1269
HphI GGTGA 3 cut(s) 204, 958, 1116
Hpy166II GTNNAC 2 cut(s) 538, 823
Hpy188I TCNGA 9 cut(s) 81, 191, 259, 324, 357, 455, 1067, 1237, 1463
Hpy188III TCNNGA 7 cut(s) 90, 128, 665, 775, 1051, 1084, 1418
Hpy8I GTNNAC 2 cut(s) 538, 823
Hpy99I CGWCG 1 cut(s) 1041
HpyAV CCTTC 1 cut(s) 440
HpyCH4III ACNGT 5 cut(s) 54, 253, 478, 757, 1393
HpyCH4IV ACGT 2 cut(s) 336, 802
HpyCH4V TGCA 9 cut(s) 368, 407, 611, 724, 809, 878, 941, 1100, 1325
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpyF3I CTNAG 7 cut(s) 148, 234, 495, 526, 1151, 1236, 1419
HpySE526I ACGT 2 cut(s) 336, 802
HspAI GCGC 1 cut(s) 832
KspAI GTTAAC 1 cut(s) 538
Kzo9I GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
LmnI GCTCC 4 cut(s) 305, 508, 521, 1344
Lsp1109I GCAGC 3 cut(s) 211, 352, 858
LweI GCATC 1 cut(s) 797
MaeI CTAG 3 cut(s) 99, 795, 1202
MaeII ACGT 2 cut(s) 336, 802
MaeIII GTNAC 3 cut(s) 550, 946, 1312
MalI GATC 6 cut(s) 42, 240, 500, 781, 1055, 1448
MboI GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
MboII GAAGA 7 cut(s) 35, 38, 45, 447, 722, 1050, 1454
MfeI CAATTG 2 cut(s) 309, 555
MflI RGATCY 3 cut(s) 238, 779, 1446
MluCI AATT 9 cut(s) 138, 185, 309, 369, 555, 603, 927, 1115, 1215
MlyI GAGTC 1 cut(s) 1414
MmeI TCCRAC 5 cut(s) 87, 283, 319, 1150, 1158
MnlI CCTC 8 cut(s) 22, 220, 512, 684, 754, 836, 887, 1091
MseI TTAA 5 cut(s) 248, 537, 765, 1110, 1289
MspCI CTTAAG 1 cut(s) 1109
MspI CCGG 2 cut(s) 647, 1269
MspR9I CCNGG 1 cut(s) 648
MunI CAATTG 2 cut(s) 309, 555
MwoI GCNNNNNNNGC 1 cut(s) 500
NciI CCSGG 1 cut(s) 648
NcoI CCATGG 2 cut(s) 596, 1220
NdeII GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
NlaIV GGNNCC 4 cut(s) 480, 523, 1212, 1416
NmuCI GTSAC 2 cut(s) 946, 1312
NspI RCATGY 1 cut(s) 1141
NspV TTCGAA 1 cut(s) 711
PagI TCATGA 1 cut(s) 1050
PciI ACATGT 1 cut(s) 1137
PfeI GAWTC 8 cut(s) 110, 192, 668, 897, 935, 1130, 1240, 1386
PkrI GCNGC 3 cut(s) 226, 367, 873
PleI GAGTC 1 cut(s) 1413
PpsI GAGTC 1 cut(s) 1413
PscI ACATGT 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 802
PspN4I GGNNCC 4 cut(s) 480, 523, 1212, 1416
PspPI GGNCC 2 cut(s) 176, 1211
PstI CTGCAG 2 cut(s) 811, 943
PsuI RGATCY 3 cut(s) 238, 779, 1446
RsaI GTAC 4 cut(s) 263, 634, 925, 1142
RsaNI GTAC 4 cut(s) 262, 633, 924, 1141
SaqAI TTAA 5 cut(s) 248, 537, 765, 1110, 1289
SatI GCNGC 3 cut(s) 225, 366, 872
Sau3AI GATC 6 cut(s) 40, 238, 498, 779, 1053, 1446
Sau96I GGNCC 2 cut(s) 176, 1211
ScaI AGTACT 1 cut(s) 263
SchI GAGTC 1 cut(s) 1414
ScrFI CCNGG 1 cut(s) 648
SfaNI GCATC 1 cut(s) 797
SfcI CTRYAG 2 cut(s) 807, 939
SfuI TTCGAA 1 cut(s) 711
SinI GGWCC 2 cut(s) 176, 1211
SmlI CTYRAG 4 cut(s) 117, 219, 827, 1109
SmoI CTYRAG 4 cut(s) 117, 219, 827, 1109
Sse9I AATT 9 cut(s) 138, 185, 309, 369, 555, 603, 927, 1115, 1215
SspI AATATT 1 cut(s) 379
SspMI CTAG 3 cut(s) 99, 795, 1202
StyD4I CCNGG 1 cut(s) 646
StyI CCWWGG 2 cut(s) 596, 1220
TaaI ACNGT 5 cut(s) 54, 253, 478, 757, 1393
TaiI ACGT 2 cut(s) 339, 805
TaqI TCGA 5 cut(s) 89, 127, 395, 711, 920
TaqII GACCGA 1 cut(s) 572
TasI AATT 9 cut(s) 138, 185, 309, 369, 555, 603, 927, 1115, 1215
TatI WGTACW 4 cut(s) 261, 632, 923, 1140
TfiI GAWTC 8 cut(s) 110, 192, 668, 897, 935, 1130, 1240, 1386
Tru1I TTAA 5 cut(s) 248, 537, 765, 1110, 1289
Tru9I TTAA 5 cut(s) 248, 537, 765, 1110, 1289
TscAI CASTG 4 cut(s) 858, 1254, 1354, 1396
TseFI GTSAC 2 cut(s) 946, 1312
TseI GCWGC 3 cut(s) 224, 365, 871
Tsp45I GTSAC 2 cut(s) 946, 1312
TspDTI ATGAA 3 cut(s) 649, 708, 783
TspGWI ACGGA 3 cut(s) 38, 358, 1153
TspRI CASTG 4 cut(s) 858, 1254, 1354, 1396
Vha464I CTTAAG 1 cut(s) 1109
VpaK11BI GGWCC 2 cut(s) 176, 1211
XapI RAATTY 2 cut(s) 603, 1115
XceI RCATGY 1 cut(s) 1141
XmiI GTMKAC 1 cut(s) 822
XspI CTAG 3 cut(s) 99, 795, 1202
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.