AT1G75220
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28229026 .. 28233134
4109 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75220.1

Sequence Viewer

Length: 1464 bp
ATGAGTTTCAGGGATGATAATGAGGAGGCTAGGAATGATTTGCGTCGGCCGTTTATTCACACCGGAAGCTGGTACCGGATGGGTTCGAGACAATCGAGTATGATGGGTTCCTCTCAAGTTATTCGAGACAGCTCTATCTCTGTTCTTGCATGTGTTTTGATCGTTGCTCTTGGCCCTATTCAATTCGGATTCACTTGTGGTTATTCATCTCCAACTCAAGCTGCAATCACCAAGGATCTCGGTTTAACAGTATCTGAGTACTCTGTGTTTGGTTCTCTTTCCAATGTGGGTGCTATGGTTGGTGCAATTGCCAGTGGTCAGATTGCAGAATACATTGGACGAAAAGGGTCTCTTATGATTGCTGCAATTCCCAATATCATTGGATGGCTTTGCATATCATTTGCAAAAGATACTTCTTTTCTTTACATGGGAAGACTTTTAGAAGGCTTTGGCGTTGGGATCATCTCTTACACTGTACCTGTATATATCGCTGAGATAGCTCCACAAAATATGAGAGGAGGATTGGGTTCGGTTAACCAGCTTTCTGTGACAATTGGAATAATGTTGGCGTATTTACTTGGCCTCTTTGTTCCATGGAGAATTCTTGCAGTTCTGGGGATATTGCCGTGTACATTATTGATACCAGGTCTCTTTTTCATCCCCGAATCCCCTCGCTGGCTGGCAAAAATGGGTATGACAGATGAATTTGAAACTTCATTACAAGTTCTTCGAGGATTTGAGACTGATATTACCGTTGAAGTTAATGAAATCAAGAGATCTGTGGCATCATCTACAAAGCGAAATACAGTTCGGTTTGTAGATCTCAAACGCAGGAGATACTATTTCCCACTTATGGTTGGTATAGGGTTGCTTGTACTTCAACAACTTGGTGGAATTAATGGTGTCCTATTCTATTCCAGTACAATATTTGAATCTGCAGGAGTTACATCGAGTAACGCAGCAACATTTGGGGTCGGGGCTATTCAGGTAGTAGCGACTGCAATATCCACTTGGTTGGTGGACAAAGCAGGTCGTCGGCTTCTGCTTACTATCTCTTCGGTTGGGATGACGATTAGCCTTGTAATTGTTGCAGCTGCTTTCTATCTTAAGGAATTTGTGTCTCCTGATTCAGACATGTACAGTTGGCTGAGCATATTGTCAGTAGTTGGAGTTGTGGCAATGGTTGTCTTTTTCTCATTGGGAATGGGACCAATACCGTGGCTCATTATGTCTGAGATCCTTCCTGTGAACATAAAGGGTTTAGCTGGAAGTATTGCAACTCTAGCCAATTGGTTCTTTTCTTGGTTGATCACCATGACAGCAAATTTGCTGTTAGCCTGGAGCAGTGGAGGAACTTTCACTCTGTATGGATTGGTTTGTGCATTCACAGTGGTGTTCGTGACTCTATGGGTTCCTGAGACCAAAGGCAAAACTCTTGAAGAACTTCAATCCTTGTTCAGATGA

Protein Analysis

487

Amino Acids

52.9

Weight (kDa)

8.72

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 52 - 486 1.1e-101 Sugar (and other) transporter
MFS_1 PF07690 63 - 431 1.7e-23 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1019
Acc65I GGTACC 1 cut(s) 72
AccB1I GGYRCC 1 cut(s) 72
AclWI GGATC 3 cut(s) 243, 467, 1231
AcoI YGGCCR 1 cut(s) 47
AcsI RAATTY 4 cut(s) 600, 704, 1112, 1324
AfaI GTAC 7 cut(s) 74, 260, 477, 631, 876, 922, 1139
AfiI CCNNNNNNNGG 3 cut(s) 69, 675, 853
AflII CTTAAG 1 cut(s) 1106
AflIII ACRYGT 1 cut(s) 1134
AgsI TTSAA 7 cut(s) 182, 710, 758, 881, 932, 1439, 1448
AjnI CCWGG 2 cut(s) 643, 1337
AleI CACNNNNGTG 1 cut(s) 1391
AluBI AGCT 7 cut(s) 69, 132, 221, 500, 541, 1094, 1265
AluI AGCT 7 cut(s) 69, 132, 221, 500, 541, 1094, 1265
Alw26I GTCTC 7 cut(s) 82, 120, 354, 653, 734, 1125, 1412
AlwI GGATC 3 cut(s) 243, 467, 1231
AlwNI CAGNNNCTG 1 cut(s) 254
AoxI GGCC 3 cut(s) 47, 172, 580
ApeKI GCWGC 5 cut(s) 221, 362, 959, 1091, 1094
ApoI RAATTY 4 cut(s) 600, 704, 1112, 1324
ArsI GACNNNNNNTTYG 2 cut(s) 1309, 1341
AseI ATTAAT 1 cut(s) 897
Asp700I GAANNNNTTC 1 cut(s) 1443
Asp718I GGTACC 1 cut(s) 72
AspS9I GGNCC 2 cut(s) 173, 1208
AsuHPI GGTGA 2 cut(s) 220, 1303
AvaII GGWCC 1 cut(s) 1208
BanI GGYRCC 1 cut(s) 72
BbsI GAAGAC 1 cut(s) 439
BbvI GCAGC 5 cut(s) 208, 349, 971, 1081, 1103
BccI CCATC 3 cut(s) 73, 97, 378
BceAI ACGGC 2 cut(s) 34, 610
BciT130I CCWGG 2 cut(s) 645, 1339
BclI TGATCA 1 cut(s) 1308
BcoDI GTCTC 7 cut(s) 82, 120, 354, 653, 734, 1125, 1412
BfaI CTAG 2 cut(s) 30, 1283
BfmI CTRYAG 1 cut(s) 936
BfrI CTTAAG 1 cut(s) 1106
BfuAI ACCTGC 1 cut(s) 1019
BglII AGATCT 2 cut(s) 776, 820
BisI GCNGC 5 cut(s) 222, 363, 960, 1092, 1095
BlpI GCTNAGC 1 cut(s) 1148
BlsI GCNGC 5 cut(s) 223, 364, 961, 1093, 1096
BmcAI AGTACT 1 cut(s) 260
Bme1390I CCNGG 2 cut(s) 645, 1339
Bme18I GGWCC 1 cut(s) 1208
BmgT120I GGNCC 2 cut(s) 173, 1208
BmiI GGNNCC 4 cut(s) 74, 109, 1209, 1413
BmrFI CCNGG 2 cut(s) 645, 1339
BmsI GCATC 1 cut(s) 794
BpiI GAAGAC 1 cut(s) 439
BpmI CTGGAG 1 cut(s) 1360
Bpu1102I GCTNAGC 1 cut(s) 1148
BpuEI CTTGAG 2 cut(s) 99, 201
BsaI GGTCTC 3 cut(s) 354, 653, 1412
BsaJI CCNNGG 3 cut(s) 231, 593, 1217
BsaWI WCCGGW 2 cut(s) 62, 75
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 675, 853
Bse1I ACTGG 2 cut(s) 312, 918
Bse3DI GCAATG 1 cut(s) 1185
BseBI CCWGG 2 cut(s) 645, 1339
BseDI CCNNGG 3 cut(s) 231, 593, 1217
BseGI GGATG 5 cut(s) 19, 84, 389, 657, 1071
BseLI CCNNNNNNNGG 3 cut(s) 69, 675, 853
BseMI GCAATG 1 cut(s) 1185
BseMII CTCAG 5 cut(s) 246, 483, 1139, 1224, 1407
BseNI ACTGG 2 cut(s) 312, 918
BseRI GAGGAG 2 cut(s) 38, 531
BseX3I CGGCCG 1 cut(s) 47
BseXI GCAGC 5 cut(s) 208, 349, 971, 1081, 1103
Bsh1285I CGRYCG 1 cut(s) 50
BshFI GGCC 3 cut(s) 49, 174, 582
BshNI GGYRCC 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 50
BsiSI CCGG 2 cut(s) 63, 76
BslFI GGGAC 1 cut(s) 1221
BslI CCNNNNNNNGG 3 cut(s) 69, 675, 853
BsmAI GTCTC 7 cut(s) 82, 120, 354, 653, 734, 1125, 1412
BsmFI GGGAC 1 cut(s) 1221
BsmI GAATGC 1 cut(s) 1382
BsnI GGCC 3 cut(s) 49, 174, 582
Bso31I GGTCTC 3 cut(s) 354, 653, 1412
Bsp1407I TGTACA 2 cut(s) 629, 1137
Bsp143I GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
Bsp1720I GCTNAGC 1 cut(s) 1148
Bsp19I CCATGG 1 cut(s) 593
BspANI GGCC 3 cut(s) 49, 174, 582
BspCNI CTCAG 5 cut(s) 247, 484, 1140, 1225, 1408
BspLI GGNNCC 4 cut(s) 74, 109, 1209, 1413
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 1019
BspPI GGATC 3 cut(s) 243, 467, 1231
BspT107I GGYRCC 1 cut(s) 72
BspTI CTTAAG 1 cut(s) 1106
BspTNI GGTCTC 3 cut(s) 354, 653, 1412
BsrDI GCAATG 1 cut(s) 1185
BsrGI TGTACA 2 cut(s) 629, 1137
BsrI ACTGG 2 cut(s) 312, 918
BssECI CCNNGG 3 cut(s) 231, 593, 1217
BssMI GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
BssT1I CCWWGG 2 cut(s) 231, 593
Bst2UI CCWGG 2 cut(s) 645, 1339
Bst4CI ACNGT 7 cut(s) 250, 475, 754, 808, 1142, 1218, 1390
Bst6I CTCTTC 1 cut(s) 1060
BstAFI CTTAAG 1 cut(s) 1106
BstAUI TGTACA 2 cut(s) 629, 1137
BstC8I GCNNGC 2 cut(s) 677, 681
BstDEI CTNAG 5 cut(s) 255, 492, 1148, 1233, 1416
BstDSI CCRYGG 2 cut(s) 593, 1217
BstF5I GGATG 5 cut(s) 19, 84, 389, 657, 1071
BstKTI GATC 7 cut(s) 162, 238, 462, 779, 823, 1239, 1311
BstMAI GTCTC 7 cut(s) 82, 120, 354, 653, 734, 1125, 1412
BstMBI GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
BstMCI CGRYCG 1 cut(s) 50
BstMWI GCNNNNNNNGC 2 cut(s) 497, 1283
BstNI CCWGG 2 cut(s) 645, 1339
BstNSI RCATGY 2 cut(s) 153, 1138
BstSCI CCNGG 2 cut(s) 643, 1337
BstSFI CTRYAG 1 cut(s) 936
BstV1I GCAGC 5 cut(s) 208, 349, 971, 1081, 1103
BstV2I GAAGAC 1 cut(s) 439
BstX2I RGATCY 4 cut(s) 235, 776, 820, 1236
BstXI CCANNNNNNTGG 2 cut(s) 1015, 1218
BstYI RGATCY 4 cut(s) 235, 776, 820, 1236
BstZI CGGCCG 1 cut(s) 47
BsuRI GGCC 3 cut(s) 49, 174, 582
BtgI CCRYGG 2 cut(s) 593, 1217
BtsCI GGATG 5 cut(s) 19, 84, 389, 657, 1071
BtsI GCAGTG 1 cut(s) 1351
BtsIMutI CAGTG 4 cut(s) 319, 471, 1351, 1395
BveI ACCTGC 1 cut(s) 1019
Cac8I GCNNGC 2 cut(s) 677, 681
CaiI CAGNNNCTG 1 cut(s) 254
Cfr13I GGNCC 2 cut(s) 173, 1208
CseI GACGC 1 cut(s) 32
CsiI ACCWGGT 1 cut(s) 643
Csp6I GTAC 7 cut(s) 73, 259, 476, 630, 875, 921, 1138
CviAII CATG 5 cut(s) 150, 427, 594, 1135, 1315
CviQI GTAC 7 cut(s) 73, 259, 476, 630, 875, 921, 1138
DdeI CTNAG 5 cut(s) 255, 492, 1148, 1233, 1416
DpnI GATC 7 cut(s) 161, 237, 461, 778, 822, 1238, 1310
DpnII GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
EaeI YGGCCR 1 cut(s) 47
EagI CGGCCG 1 cut(s) 47
Eam1104I CTCTTC 1 cut(s) 1060
EarI CTCTTC 1 cut(s) 1060
EclXI CGGCCG 1 cut(s) 47
Eco130I CCWWGG 2 cut(s) 231, 593
Eco31I GGTCTC 3 cut(s) 354, 653, 1412
Eco47I GGWCC 1 cut(s) 1208
Eco52I CGGCCG 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 600
EcoRII CCWGG 2 cut(s) 643, 1337
EcoT14I CCWWGG 2 cut(s) 231, 593
ErhI CCWWGG 2 cut(s) 231, 593
FaeI CATG 5 cut(s) 153, 430, 597, 1138, 1318
FalI AAGNNNNNCTT 2 cut(s) 336, 368
FaqI GGGAC 1 cut(s) 1221
FatI CATG 5 cut(s) 149, 426, 593, 1134, 1314
FbaI TGATCA 1 cut(s) 1308
Fnu4HI GCNGC 5 cut(s) 222, 363, 960, 1092, 1095
FokI GGATG 5 cut(s) 26, 91, 396, 644, 1078
Fsp4HI GCNGC 5 cut(s) 222, 363, 960, 1092, 1095
FspBI CTAG 2 cut(s) 30, 1283
GluI GCNGC 5 cut(s) 222, 363, 960, 1092, 1095
GsuI CTGGAG 1 cut(s) 1360
HaeIII GGCC 3 cut(s) 49, 174, 582
HapII CCGG 2 cut(s) 63, 76
HgaI GACGC 1 cut(s) 32
Hin1II CATG 5 cut(s) 153, 430, 597, 1138, 1318
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HinfI GANTC 5 cut(s) 189, 665, 932, 1127, 1402
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 2 cut(s) 63, 76
HphI GGTGA 2 cut(s) 220, 1303
Hpy166II GTNNAC 4 cut(s) 535, 630, 1021, 1249
Hpy188I TCNGA 6 cut(s) 188, 256, 321, 1132, 1234, 1460
Hpy188III TCNNGA 7 cut(s) 87, 125, 772, 1124, 1399, 1415, 1436
Hpy8I GTNNAC 4 cut(s) 535, 630, 1021, 1249
Hpy99I CGWCG 2 cut(s) 48, 1038
HpyAV CCTTC 2 cut(s) 437, 1250
HpyCH4III ACNGT 7 cut(s) 250, 475, 754, 808, 1142, 1218, 1390
HpyF10VI GCNNNNNNNGC 2 cut(s) 497, 1283
HpyF3I CTNAG 5 cut(s) 255, 492, 1148, 1233, 1416
Hsp92II CATG 5 cut(s) 153, 430, 597, 1138, 1318
KpnI GGTACC 1 cut(s) 76
Ksp22I TGATCA 1 cut(s) 1308
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
LmnI GCTCC 2 cut(s) 505, 1341
Lsp1109I GCAGC 5 cut(s) 208, 349, 971, 1081, 1103
LweI GCATC 1 cut(s) 794
MabI ACCWGGT 1 cut(s) 643
MaeI CTAG 2 cut(s) 30, 1283
MaeIII GTNAC 4 cut(s) 547, 943, 953, 1399
MalI GATC 7 cut(s) 161, 237, 461, 778, 822, 1238, 1310
MboI GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
MboII GAAGA 4 cut(s) 444, 719, 1047, 1451
MfeI CAATTG 3 cut(s) 306, 552, 1288
MflI RGATCY 4 cut(s) 235, 776, 820, 1236
MlyI GAGTC 1 cut(s) 1396
MmeI TCCRAC 2 cut(s) 236, 1147
MnlI CCTC 9 cut(s) 16, 19, 121, 509, 512, 593, 681, 725, 1343
MroXI GAANNNNTTC 1 cut(s) 1443
MseI TTAA 5 cut(s) 245, 534, 762, 897, 1107
MslI CAYNNNNRTG 1 cut(s) 1391
MspA1I CMGCKG 1 cut(s) 1094
MspCI CTTAAG 1 cut(s) 1106
MspI CCGG 2 cut(s) 63, 76
MspR9I CCNGG 2 cut(s) 645, 1339
MunI CAATTG 3 cut(s) 306, 552, 1288
Mva1269I GAATGC 1 cut(s) 1382
MvaI CCWGG 2 cut(s) 645, 1339
MwoI GCNNNNNNNGC 2 cut(s) 497, 1283
NcoI CCATGG 1 cut(s) 593
NdeII GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
NlaIII CATG 5 cut(s) 153, 430, 597, 1138, 1318
NlaIV GGNNCC 4 cut(s) 74, 109, 1209, 1413
NmuCI GTSAC 2 cut(s) 547, 1399
NspI RCATGY 2 cut(s) 153, 1138
OliI CACNNNNGTG 1 cut(s) 1391
PciI ACATGT 1 cut(s) 1134
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 1382
PdmI GAANNNNTTC 1 cut(s) 1443
PfeI GAWTC 4 cut(s) 189, 665, 932, 1127
PkrI GCNGC 5 cut(s) 223, 364, 961, 1093, 1096
PleI GAGTC 1 cut(s) 1396
PpsI GAGTC 1 cut(s) 1396
PscI ACATGT 1 cut(s) 1134
PshBI ATTAAT 1 cut(s) 897
Psp6I CCWGG 2 cut(s) 643, 1337
PspGI CCWGG 2 cut(s) 643, 1337
PspN4I GGNNCC 4 cut(s) 74, 109, 1209, 1413
PspPI GGNCC 2 cut(s) 173, 1208
PsrI GAACNNNNNNTAC 2 cut(s) 91, 123
PstI CTGCAG 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 254
PsuI RGATCY 4 cut(s) 235, 776, 820, 1236
PvuII CAGCTG 1 cut(s) 1094
RsaI GTAC 7 cut(s) 74, 260, 477, 631, 876, 922, 1139
RsaNI GTAC 7 cut(s) 73, 259, 476, 630, 875, 921, 1138
RseI CAYNNNNRTG 1 cut(s) 1391
SaqAI TTAA 5 cut(s) 245, 534, 762, 897, 1107
SatI GCNGC 5 cut(s) 222, 363, 960, 1092, 1095
Sau3AI GATC 7 cut(s) 159, 235, 459, 776, 820, 1236, 1308
Sau96I GGNCC 2 cut(s) 173, 1208
ScaI AGTACT 1 cut(s) 260
SchI GAGTC 1 cut(s) 1396
ScrFI CCNGG 2 cut(s) 645, 1339
SexAI ACCWGGT 1 cut(s) 643
SfaNI GCATC 1 cut(s) 794
SfcI CTRYAG 1 cut(s) 936
SinI GGWCC 1 cut(s) 1208
SmiMI CAYNNNNRTG 1 cut(s) 1391
SmlI CTYRAG 3 cut(s) 114, 216, 1106
SmoI CTYRAG 3 cut(s) 114, 216, 1106
SspI AATATT 1 cut(s) 927
SspMI CTAG 2 cut(s) 30, 1283
StyD4I CCNGG 2 cut(s) 643, 1337
StyI CCWWGG 2 cut(s) 231, 593
TaaI ACNGT 7 cut(s) 250, 475, 754, 808, 1142, 1218, 1390
TaqI TCGA 5 cut(s) 86, 95, 124, 730, 950
TatI WGTACW 5 cut(s) 258, 629, 874, 920, 1137
TfiI GAWTC 4 cut(s) 189, 665, 932, 1127
Tru1I TTAA 5 cut(s) 245, 534, 762, 897, 1107
Tru9I TTAA 5 cut(s) 245, 534, 762, 897, 1107
TscAI CASTG 4 cut(s) 319, 478, 1351, 1395
TseFI GTSAC 2 cut(s) 547, 1399
TseI GCWGC 5 cut(s) 221, 362, 959, 1091, 1094
Tsp45I GTSAC 2 cut(s) 547, 1399
TspDTI ATGAA 5 cut(s) 195, 646, 705, 717, 780
TspRI CASTG 4 cut(s) 319, 478, 1351, 1395
Vha464I CTTAAG 1 cut(s) 1106
VpaK11BI GGWCC 1 cut(s) 1208
VspI ATTAAT 1 cut(s) 897
XapI RAATTY 4 cut(s) 600, 704, 1112, 1324
XceI RCATGY 2 cut(s) 153, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 1015
XmnI GAANNNNTTC 1 cut(s) 1443
XspI CTAG 2 cut(s) 30, 1283
ZrmI AGTACT 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.