MD15G1026400.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
1556102 .. 1560456
4355 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1026400.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGAGTTTCCGGGAAGACAGTGAAGAGGGGAGGGGCGATCTGCGGAAGCCCTTCCTCCACACTGGGAGTTGGTACCGCATGGGTTCCAGGCAATCCAGCATGATGGGCTCGTCGCAGGTGATTCGAGATAGCTCCATCTCTGTGGTCGCTTGTGTCATGATTGTCGCTCTGGGTCCTATCCAATTCGGCTTCACCTCTGGCTATTCTTCTCCAACCCAAGCAGCAATCGTCAAGGATCTAAAGCTTACAGTATCAGAGTATTCGCTTTTCGGTTCTTTGTCGAATGTGGGAGCTATGGTTGGAGCTATAGCCAGCGGTCAGATTTCCGAGTATATTGGACGCAAAGGGTCTTTAATGATCGCGGCTATTCCTAATGTTATCGGTTGGCTTGTCATATCATTTGCCAGAGATTCTTCTTTTCTCTACATGGGAAGGTTGTTGGAAGGATTTGGCGTGGGAATAATCTCCTACACGGTGCCTGTATATATAGCTGAGATAGCACCTCAAAACTTAAGAGGCGCTTTGGGTTCAGTCAATCAGCTCTCTGTAACGATTGGAATACTGCTGGCTTATCTGCTTGGACTTTTTGTTCAATGGAGGATACTTGCAGTTCTGGGAATATTGCCTTGTACGATATTGATACCTGGGCTCTTTTTCATTCCAGAATCTCCTCGATGGCTGGCAAAAATGGGCATGACAGAGGATTTTGAAGCTTCTCTGCAAGTTCTCCGAGGATTTGATACGGATATTTCGGTTGAAGTCAATGAAATCAAGAGGTCTGTAGCATCAACATCCAAAAGAACAACAATTCGGTTTTCACAGCTTAAACAAAGAAGATATTGGCTTCCTCTAATGATTGGAATTGGTTTACTTGTTCTTCAACAACTAAGTGGAATTAACGGTGTTCTATTCTATTCCACTACCATTTTTGAATCTGCAGGGATTTCGTCAGGTAATGTAGCCACAGTTGGTCTCGGAGCTGTTCAGGTCATAGCGACTGGGGTGACTACATGGTTGGCAGACAAAGCAGGCCGTCGTCTTTTGCTTATTATCTCTTCTGCTGGAATGACGATTTTCCTCCTCATTGTTGCGATATCATTCTACATAAAGGATCTTGTGGACGTTGATTCAAATATTTATAGCATATTGGGCATCATATCAGTGGTTGGAGTTGTGGCCATGGTAATTTCATTCTCTCTGGGTATGGGAGCTATTCCATGGCTTATAATGTCTGAGATTCTTCCAATTAATATTAAAGGCCTTGCTGGAAGCATAGCAACACTTGCCAATTGGTTCACAGCCTGGGTGGTCACGATGACAGCAAACTTGCTACTGGAATGGAGCAGTGGAGGAACCTTCACCATTTACATGCTGGTGAGTGCTTTCGCCGTTGTATTTGTTTCCATTTGGGTTCCGGAGACAAAGGGAAGAACTTTGGAAGAGATTCAATGGTCCTTTAGATAA

Protein Analysis

488

Amino Acids

52.77

Weight (kDa)

8.95

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 52 - 486 3.5e-99 Sugar (and other) transporter
MFS_1 PF07690 62 - 429 6.5e-22 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1226
AarI CACCTGC 1 cut(s) 106
Acc36I ACCTGC 1 cut(s) 106
Acc65I GGTACC 1 cut(s) 72
AccB1I GGYRCC 2 cut(s) 72, 475
AccII CGCG 1 cut(s) 362
AccIII TCCGGA 1 cut(s) 1414
AciI CCGC 4 cut(s) 43, 76, 315, 362
AclWI GGATC 2 cut(s) 243, 1119
AcoI YGGCCR 1 cut(s) 1176
AfaI GTAC 2 cut(s) 74, 631
AflII CTTAAG 1 cut(s) 511
AgsI TTSAA 7 cut(s) 593, 710, 758, 881, 932, 1131, 1448
AjnI CCWGG 3 cut(s) 86, 643, 1301
AloI GAACNNNNNNTCC 2 cut(s) 573, 605
Alw26I GTCTC 2 cut(s) 977, 1412
AlwI GGATC 2 cut(s) 243, 1119
Aor13HI TCCGGA 1 cut(s) 1414
AoxI GGCC 3 cut(s) 1030, 1176, 1258
ApeKI GCWGC 1 cut(s) 221
AseI ATTAAT 1 cut(s) 1248
Asp700I GAANNNNTTC 2 cut(s) 50, 1443
Asp718I GGTACC 1 cut(s) 72
AspLEI GCGC 1 cut(s) 521
AspS9I GGNCC 2 cut(s) 173, 1452
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 5 cut(s) 130, 184, 1015, 1351, 1387
AvaII GGWCC 2 cut(s) 173, 1452
BalI TGGCCA 1 cut(s) 1178
BanI GGYRCC 2 cut(s) 72, 475
BanII GRGCYC 2 cut(s) 110, 651
BbsI GAAGAC 1 cut(s) 21
BbvI GCAGC 1 cut(s) 233
BccI CCATC 3 cut(s) 97, 143, 669
BceAI ACGGC 2 cut(s) 1017, 1373
BcgI CGANNNNNNTGC 4 cut(s) 104, 138, 927, 961
BciT130I CCWGG 3 cut(s) 88, 645, 1303
BciVI GTATCC 1 cut(s) 594
BcnI CCSGG 1 cut(s) 11
BcoDI GTCTC 2 cut(s) 977, 1412
BfmI CTRYAG 3 cut(s) 306, 780, 936
BfoI RGCGCY 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 511
BfuAI ACCTGC 1 cut(s) 106
BfuI GTATCC 1 cut(s) 594
BisI GCNGC 2 cut(s) 222, 363
BlsI GCNGC 2 cut(s) 223, 364
Bme1390I CCNGG 4 cut(s) 11, 88, 645, 1303
Bme18I GGWCC 2 cut(s) 173, 1452
BmgT120I GGNCC 2 cut(s) 173, 1452
BmiI GGNNCC 6 cut(s) 74, 85, 174, 477, 1354, 1413
BmrFI CCNGG 4 cut(s) 11, 88, 645, 1303
BmrI ACTGGG 2 cut(s) 72, 1008
BmsI GCATC 2 cut(s) 794, 1161
BmuI ACTGGG 2 cut(s) 72, 1008
BpiI GAAGAC 1 cut(s) 21
BpuMI CCSGG 1 cut(s) 11
BsaI GGTCTC 1 cut(s) 977
BsaJI CCNNGG 5 cut(s) 644, 730, 1179, 1217, 1302
BsaWI WCCGGW 1 cut(s) 1414
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bse1I ACTGG 3 cut(s) 67, 1003, 1338
BseAI TCCGGA 1 cut(s) 1414
BseBI CCWGG 3 cut(s) 88, 645, 1303
BseDI CCNNGG 5 cut(s) 644, 730, 1179, 1217, 1302
BseGI GGATG 1 cut(s) 791
BseMII CTCAG 2 cut(s) 483, 1224
BseNI ACTGG 3 cut(s) 67, 1003, 1338
BseRI GAGGAG 2 cut(s) 660, 1070
BseXI GCAGC 1 cut(s) 233
Bsh1236I CGCG 1 cut(s) 362
BshFI GGCC 3 cut(s) 1032, 1178, 1260
BshNI GGYRCC 2 cut(s) 72, 475
BsiSI CCGG 2 cut(s) 10, 1415
BsmAI GTCTC 2 cut(s) 977, 1412
BsnI GGCC 3 cut(s) 1032, 1178, 1260
Bso31I GGTCTC 1 cut(s) 977
Bsp1286I GDGCHC 2 cut(s) 110, 651
Bsp13I TCCGGA 1 cut(s) 1414
Bsp143I GATC 4 cut(s) 37, 235, 357, 1111
Bsp19I CCATGG 2 cut(s) 1179, 1217
BspACI CCGC 4 cut(s) 43, 76, 315, 362
BspANI GGCC 3 cut(s) 1032, 1178, 1260
BspCNI CTCAG 2 cut(s) 484, 1225
BspEI TCCGGA 1 cut(s) 1414
BspFNI CGCG 1 cut(s) 362
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 6 cut(s) 74, 85, 174, 477, 1354, 1413
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 106
BspPI GGATC 2 cut(s) 243, 1119
BspT107I GGYRCC 2 cut(s) 72, 475
BspTI CTTAAG 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 977
BsrI ACTGG 3 cut(s) 67, 1003, 1338
BssECI CCNNGG 5 cut(s) 644, 730, 1179, 1217, 1302
BssMI GATC 4 cut(s) 37, 235, 357, 1111
BssT1I CCWWGG 2 cut(s) 1179, 1217
Bst2UI CCWGG 3 cut(s) 88, 645, 1303
Bst4CI ACNGT 5 cut(s) 20, 250, 475, 902, 967
Bst6I CTCTTC 3 cut(s) 18, 1060, 1434
BstAFI CTTAAG 1 cut(s) 511
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstC8I GCNNGC 4 cut(s) 313, 567, 681, 1030
BstDEI CTNAG 3 cut(s) 492, 887, 1233
BstDSI CCRYGG 2 cut(s) 1179, 1217
BstF5I GGATG 1 cut(s) 791
BstFNI CGCG 1 cut(s) 362
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 1 cut(s) 521
BstKTI GATC 4 cut(s) 40, 238, 360, 1114
BstMAI GTCTC 2 cut(s) 977, 1412
BstMBI GATC 4 cut(s) 37, 235, 357, 1111
BstMWI GCNNNNNNNGC 5 cut(s) 105, 497, 1025, 1149, 1283
BstNI CCWGG 3 cut(s) 88, 645, 1303
BstNSI RCATGY 1 cut(s) 1372
BstSCI CCNGG 4 cut(s) 9, 86, 643, 1301
BstSFI CTRYAG 3 cut(s) 306, 780, 936
BstUI CGCG 1 cut(s) 362
BstV1I GCAGC 1 cut(s) 233
BstV2I GAAGAC 1 cut(s) 21
BstX2I RGATCY 2 cut(s) 235, 1111
BstXI CCANNNNNNTGG 2 cut(s) 103, 142
BstYI RGATCY 2 cut(s) 235, 1111
BsuI GTATCC 1 cut(s) 594
BsuRI GGCC 3 cut(s) 1032, 1178, 1260
BtgI CCRYGG 2 cut(s) 1179, 1217
BtsCI GGATG 1 cut(s) 791
BtsI GCAGTG 1 cut(s) 1351
BtsIMutI CAGTG 4 cut(s) 25, 60, 1167, 1351
BveI ACCTGC 1 cut(s) 106
Cac8I GCNNGC 4 cut(s) 313, 567, 681, 1030
CciI TCATGA 1 cut(s) 156
CfoI GCGC 1 cut(s) 521
Cfr13I GGNCC 2 cut(s) 173, 1452
CseI GACGC 1 cut(s) 348
Csp6I GTAC 2 cut(s) 73, 630
CviAII CATG 9 cut(s) 79, 100, 157, 427, 694, 1011, 1180, 1218, 1369
CviQI GTAC 2 cut(s) 73, 630
DdeI CTNAG 3 cut(s) 492, 887, 1233
DpnI GATC 4 cut(s) 39, 237, 359, 1113
DpnII GATC 4 cut(s) 37, 235, 357, 1111
EaeI YGGCCR 1 cut(s) 1176
Eam1104I CTCTTC 3 cut(s) 18, 1060, 1434
EarI CTCTTC 3 cut(s) 18, 1060, 1434
Eco130I CCWWGG 2 cut(s) 1179, 1217
Eco147I AGGCCT 1 cut(s) 1260
Eco24I GRGCYC 2 cut(s) 110, 651
Eco31I GGTCTC 1 cut(s) 977
Eco32I GATATC 1 cut(s) 1095
Eco47I GGWCC 2 cut(s) 173, 1452
EcoO109I RGGNCCY 1 cut(s) 173
EcoRII CCWGG 3 cut(s) 86, 643, 1301
EcoRV GATATC 1 cut(s) 1095
EcoT14I CCWWGG 2 cut(s) 1179, 1217
EcoT38I GRGCYC 2 cut(s) 110, 651
ErhI CCWWGG 2 cut(s) 1179, 1217
FaeI CATG 9 cut(s) 82, 103, 160, 430, 697, 1014, 1183, 1221, 1372
FalI AAGNNNNNCTT 2 cut(s) 505, 537
FatI CATG 9 cut(s) 78, 99, 156, 426, 693, 1010, 1179, 1217, 1368
Fnu4HI GCNGC 2 cut(s) 222, 363
FokI GGATG 1 cut(s) 778
FriOI GRGCYC 2 cut(s) 110, 651
Fsp4HI GCNGC 2 cut(s) 222, 363
GlaI GCGC 1 cut(s) 520
GluI GCNGC 2 cut(s) 222, 363
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 3 cut(s) 1032, 1178, 1260
HapII CCGG 2 cut(s) 10, 1415
HgaI GACGC 1 cut(s) 348
HhaI GCGC 1 cut(s) 521
Hin1II CATG 9 cut(s) 82, 103, 160, 430, 697, 1014, 1183, 1221, 1372
Hin6I GCGC 1 cut(s) 519
HinP1I GCGC 1 cut(s) 519
HindIII AAGCTT 2 cut(s) 242, 711
HinfI GANTC 7 cut(s) 121, 410, 665, 932, 1127, 1237, 1444
HpaII CCGG 2 cut(s) 10, 1415
HphI GGTGA 5 cut(s) 130, 184, 1015, 1351, 1387
Hpy166II GTNNAC 3 cut(s) 869, 1120, 1296
Hpy188I TCNGA 6 cut(s) 256, 321, 328, 731, 977, 1234
Hpy188III TCNNGA 6 cut(s) 125, 157, 662, 772, 1312, 1415
Hpy8I GTNNAC 3 cut(s) 869, 1120, 1296
Hpy99I CGWCG 2 cut(s) 115, 1038
HpyAV CCTTC 4 cut(s) 61, 426, 437, 1366
HpyCH4III ACNGT 5 cut(s) 20, 250, 475, 902, 967
HpyCH4IV ACGT 1 cut(s) 1122
HpyCH4V TGCA 3 cut(s) 608, 721, 938
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 497, 1025, 1149, 1283
HpyF3I CTNAG 3 cut(s) 492, 887, 1233
HpySE526I ACGT 1 cut(s) 1122
Hsp92II CATG 9 cut(s) 82, 103, 160, 430, 697, 1014, 1183, 1221, 1372
HspAI GCGC 1 cut(s) 519
Kpn2I TCCGGA 1 cut(s) 1414
KpnI GGTACC 1 cut(s) 76
Kzo9I GATC 4 cut(s) 37, 235, 357, 1111
LmnI GCTCC 6 cut(s) 137, 290, 302, 977, 1208, 1341
Lsp1109I GCAGC 1 cut(s) 233
LweI GCATC 2 cut(s) 794, 1161
MaeII ACGT 1 cut(s) 1122
MaeIII GTNAC 3 cut(s) 547, 1003, 1309
MalI GATC 4 cut(s) 39, 237, 359, 1113
MboI GATC 4 cut(s) 37, 235, 357, 1111
MfeI CAATTG 1 cut(s) 1288
MflI RGATCY 2 cut(s) 235, 1111
MhlI GDGCHC 2 cut(s) 110, 651
MlsI TGGCCA 1 cut(s) 1178
MluCI AATT 7 cut(s) 182, 807, 861, 894, 1185, 1245, 1288
MluNI TGGCCA 1 cut(s) 1178
MmeI TCCRAC 4 cut(s) 236, 280, 420, 1147
Mox20I TGGCCA 1 cut(s) 1178
MroI TCCGGA 1 cut(s) 1414
MroXI GAANNNNTTC 2 cut(s) 50, 1443
MscI TGGCCA 1 cut(s) 1178
MseI TTAA 6 cut(s) 353, 512, 825, 897, 1248, 1254
MslI CAYNNNNRTG 4 cut(s) 140, 1160, 1367, 1373
Msp20I TGGCCA 1 cut(s) 1178
MspA1I CMGCKG 1 cut(s) 315
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 2 cut(s) 10, 1415
MspR9I CCNGG 4 cut(s) 11, 88, 645, 1303
MunI CAATTG 1 cut(s) 1288
MvaI CCWGG 3 cut(s) 88, 645, 1303
MvnI CGCG 1 cut(s) 362
MwoI GCNNNNNNNGC 5 cut(s) 105, 497, 1025, 1149, 1283
NciI CCSGG 1 cut(s) 11
NcoI CCATGG 2 cut(s) 1179, 1217
NdeII GATC 4 cut(s) 37, 235, 357, 1111
NlaIII CATG 9 cut(s) 82, 103, 160, 430, 697, 1014, 1183, 1221, 1372
NlaIV GGNNCC 6 cut(s) 74, 85, 174, 477, 1354, 1413
NmuCI GTSAC 2 cut(s) 1003, 1309
NspI RCATGY 1 cut(s) 1372
PagI TCATGA 1 cut(s) 156
PaqCI CACCTGC 1 cut(s) 106
PceI AGGCCT 1 cut(s) 1260
PdmI GAANNNNTTC 2 cut(s) 50, 1443
PfeI GAWTC 7 cut(s) 121, 410, 665, 932, 1127, 1237, 1444
PfoI TCCNGGA 1 cut(s) 9
PkrI GCNGC 2 cut(s) 223, 364
PpuMI RGGWCCY 1 cut(s) 173
PshBI ATTAAT 1 cut(s) 1248
PsiI TTATAA 1 cut(s) 1226
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 3 cut(s) 86, 643, 1301
PspGI CCWGG 3 cut(s) 86, 643, 1301
PspN4I GGNNCC 6 cut(s) 74, 85, 174, 477, 1354, 1413
PspPI GGNCC 2 cut(s) 173, 1452
PspPPI RGGWCCY 1 cut(s) 173
PstI CTGCAG 1 cut(s) 940
PsuI RGATCY 2 cut(s) 235, 1111
RsaI GTAC 2 cut(s) 74, 631
RsaNI GTAC 2 cut(s) 73, 630
RseI CAYNNNNRTG 4 cut(s) 140, 1160, 1367, 1373
SaqAI TTAA 6 cut(s) 353, 512, 825, 897, 1248, 1254
SatI GCNGC 2 cut(s) 222, 363
Sau3AI GATC 4 cut(s) 37, 235, 357, 1111
Sau96I GGNCC 2 cut(s) 173, 1452
ScrFI CCNGG 4 cut(s) 11, 88, 645, 1303
SduI GDGCHC 2 cut(s) 110, 651
SfaNI GCATC 2 cut(s) 794, 1161
SfcI CTRYAG 3 cut(s) 306, 780, 936
SinI GGWCC 2 cut(s) 173, 1452
SmiMI CAYNNNNRTG 4 cut(s) 140, 1160, 1367, 1373
SmlI CTYRAG 1 cut(s) 511
SmoI CTYRAG 1 cut(s) 511
Sse9I AATT 7 cut(s) 182, 807, 861, 894, 1185, 1245, 1288
SseBI AGGCCT 1 cut(s) 1260
SsiI CCGC 4 cut(s) 43, 76, 315, 362
SspI AATATT 3 cut(s) 621, 1135, 1252
StuI AGGCCT 1 cut(s) 1260
StyD4I CCNGG 4 cut(s) 9, 86, 643, 1301
StyI CCWWGG 2 cut(s) 1179, 1217
TaaI ACNGT 5 cut(s) 20, 250, 475, 902, 967
TaiI ACGT 1 cut(s) 1125
TaqI TCGA 3 cut(s) 124, 281, 673
TasI AATT 7 cut(s) 182, 807, 861, 894, 1185, 1245, 1288
TauI GCSGC 1 cut(s) 365
TfiI GAWTC 7 cut(s) 121, 410, 665, 932, 1127, 1237, 1444
Tru1I TTAA 6 cut(s) 353, 512, 825, 897, 1248, 1254
Tru9I TTAA 6 cut(s) 353, 512, 825, 897, 1248, 1254
TscAI CASTG 4 cut(s) 25, 67, 1167, 1351
TseFI GTSAC 2 cut(s) 1003, 1309
TseI GCWGC 1 cut(s) 221
Tsp45I GTSAC 2 cut(s) 1003, 1309
TspDTI ATGAA 3 cut(s) 646, 780, 1179
TspGWI ACGGA 1 cut(s) 758
TspRI CASTG 4 cut(s) 25, 67, 1167, 1351
Vha464I CTTAAG 1 cut(s) 511
VpaK11BI GGWCC 2 cut(s) 173, 1452
VspI ATTAAT 1 cut(s) 1248
XceI RCATGY 1 cut(s) 1372
XcmI CCANNNNNNNNNTGG 1 cut(s) 1369
XmnI GAANNNNTTC 2 cut(s) 50, 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.