FvH4_2g20290

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0011288
Physical Location & Seq
Reverse (-)
17055913 .. 17059145
3233 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g20290.t1

Sequence Viewer

Length: 1902 bp
ATGGCGGACGACCCGGCTGAGATCTACGACGGAATCAGAGCCGAATTTCCTCTCTCATTCGGTAAGCAATCCAAATCTCAAACCCCTCTCGAAACCATCCACAATACGACACGTCGTAACCAGAGCCTCCACCAACAACCACCCTCCTCCTCCTCCTCCGCCGCCAACGACCTCCCTTCTCTCTCCTCCTCCTCCAAAACCTGGCTCAATTCCCTCCGCTCCGCCAAAACCCCTAACCCTAACCCTAACGATTCGGATGCATCCCTTATCGGACCACCTCGTCCGCCGCAGCCGAATTCGACCGATGAAGACGACGGCGACGCCCTTATTGGACCACCTCCGCCGCCACCGGGGGGCGCCGAGAGCGACGACGATGGGGAGATGATTGGGCCGCCGGCGCCGGCGCGGTCCAATATGGAGGATTCGGATTCCGAAGCGGAGGAGGAGAACAAGTACCGGATTCCAGTGAGCAATGAGATTGTGCTGAAGGGACACACCAAGGTGGTTTCGGCCCTGGCCATTGATCACACTGGTTCTAGGGTTGTAACTGGTAGCTATGACTATTCGGTGAGAATGTACGATTTCCAAGGAATGAATGCAAAGCTGCAATCTTTCCGGCAGCTGGAGCCGTCGGAAGGTCATCAAGTCAGGACTATTAGCTGGAGCCCCACCGCCGACCGGTTTCTTTGTGTCACCGGCTCTGCTCAGGCAAAGATTTATGATCGTGACGGACTTACTCTCGGAGAGTTTGTTAAAGGGGACATGTATATTCGTGATCTTAAGAATACCAAGGGGCATATTACTGGATTGACCTGTGGACAGTGGCACCCTAGGAAGAAAGACGAAATCTTGACATCGTCGGAGGATGGGTCGCTGCGCATTTGGGATGTCAATGACTTCAAAACTCAGAAACAGGTAATCAAGCCAAAACTTGCTAGGCCTGGAAGAGTTCCAGTCACCACTTGTGCTTGGGATCATGAAGGCCAACGGATTGCAGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAACATTAAACCCGGATGGGGAAGTAGGCCAGACATACATGTTCCAGGAGCTCATTCAGATGATATTACTGGGCTTAAGTTTTCTAGGGATGGGAGAATCTTACTCTCAAGAAGCTGTGATGGCACTTTGAAGGTTTGGGATTTACGTCAGATGAAAGATCCTCTCAAGGTGTTTCAGGATCTCCCAGATAATTATGCACAAACCAATATTGCATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACTTCAATTGAAAGGGAGAGCACAACTGGTGGATTACTATGCTTCTTTGATCGAGCAAAACTGGAACTTGTTTCAAAAGTTGGGATATCCCCTACTTGTAGTGTTGTGCAATGTGCCTGGCACCCAAAACTGAATCAGATCTTTGCAACAATGGGGGATAAAAGTCAAGGCGAAACTCATGTATTATATGATCCAACTCTTAGTGAAAGAGGAGCTCTTGTTTGTGTTGCACGTGCACCTAGGAAAAAATCTGTTGATGATTTTGTGGCAAACCCAGTCATACACAACCCTCATGCTCTACCTTTATTTAGAGATCAACCAAGCCGTAAGCGTGAGCGAGAGAAAACATTGAAGGATCCAGTTAAATCCCATAAGCCTGACCTTCCCATGACAGGACCAGGCTTTGGTGGAAGAGTTGGCGTAAGTAAAGGAAGCTTATTGACCCAGTACCTTATGAAGCAAGGTGGTATGATCAAGGAGACGTGGATGGACGAAGATCCAAGAGAAGCCATACTGAAGTATGCAGATGTTGCAGCAAAAGATCCAAAGTACATAGCTCCAGCTTATGCAGAAACCCAGCCTGAAACAGTTTTTGCGAAATCAGACTCTGAGGATGAAGAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Band_7 WD40

Protein Analysis

634

Amino Acids

69.67

Weight (kDa)

5.9

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 157 - 243 5.8e-06 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 159 - 236 2.2e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 161 - 241 6.8e-06 WDR5 beta-propeller domain
Beta-prop_EML PF23409 164 - 427 4.4e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 165 - 230 9.9e-06 THOC3 beta-propeller domain
WD40_Prp19 PF24814 169 - 425 3.9e-21 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 214 - 306 1.7e-07 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 257 - 392 4.7e-11 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 261 - 426 3.2e-21 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 263 - 424 4.9e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 264 - 427 3.7e-16 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 270 - 481 3.6e-14 CDC20/Fizzy WD40 domain
Beta-prop_Aladin PF25460 270 - 395 3.9e-07 Aladin seven-bladed propeller
Beta-prop_EML_2 PF23414 276 - 421 2.1e-11 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 278 - 393 1.3e-06 WDR55
WD40_MABP1-WDR62_2nd PF24782 279 - 391 3.1e-07 MABP1/WDR62 second WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 280 - 396 4e-07 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 281 - 424 5.5e-07 WDR36/Utp21 first beta-propeller
WD40_WDHD1_1st PF24817 317 - 406 5.4e-08 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 319 - 480 2.2e-15 THOC3 beta-propeller domain
WD40 PF00400 358 - 390 9.6e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20330
fragaria_vesca FvH4_2g20290 FvH4_2g20290
malus_domestica MD10G1174900.v1.1
prunus_persica Prupe.8G213600_v2.0.a1
pyrus_communis pycom05g17160 pycom10g15070
rosa_chinensis RchiOBHm_Chr6g0286091 RchiOBHm_Chr6g0286201
rosa_laevigata RLG00000012583
rosa_multiflora Rmu_sc0028702.1_g000001
rosa_roxburghii Rroxscaffold_7G00182460
rosa_rugosa Rorug06G0178900
rosa_samantha Rh6AG291300 Rh6BG294600 Rh6CG294200 Rh6CG294800 Rh6DG286200 Rh6DG286800
rosa_wichuraiana Rw6G025100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 986
AasI GACNNNNNNGTC 1 cut(s) 279
Acc16I TGCGCA 1 cut(s) 878
Acc36I ACCTGC 1 cut(s) 986
AccB1I GGYRCC 4 cut(s) 356, 397, 825, 1395
AccB7I CCANNNNNTGG 2 cut(s) 201, 1679
AccBSI CCGCTC 1 cut(s) 219
AccII CGCG 1 cut(s) 406
AclWI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
AcoI YGGCCR 1 cut(s) 516
AcsI RAATTY 2 cut(s) 44, 295
AcuI CTGAAG 2 cut(s) 506, 1811
AcvI CACGTG 1 cut(s) 1508
AcyI GRCGYC 3 cut(s) 321, 357, 398
AfaI GTAC 4 cut(s) 455, 578, 1724, 1826
AfiI CCNNNNNNNGG 9 cut(s) 201, 350, 353, 622, 635, 678, 1046, 1667, 1679
AflII CTTAAG 2 cut(s) 779, 1103
AflIII ACRYGT 3 cut(s) 110, 762, 1066
AgeI ACCGGT 1 cut(s) 678
AgsI TTSAA 6 cut(s) 901, 1159, 1281, 1286, 1350, 1627
AjiI CACGTC 2 cut(s) 113, 1758
AjnI CCWGG 6 cut(s) 200, 513, 940, 1072, 1391, 1672
AleI CACNNNNGTG 1 cut(s) 500
Alw21I GWGCWC 4 cut(s) 1081, 1298, 1492, 1513
Alw26I GTCTC 1 cut(s) 1748
Alw44I GTGCAC 1 cut(s) 1509
AlwI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
AlwNI CAGNNNCTG 1 cut(s) 1883
AoxI GGCC 6 cut(s) 389, 510, 516, 938, 982, 1055
ApaLI GTGCAC 1 cut(s) 1509
ApeKI GCWGC 5 cut(s) 289, 604, 619, 874, 1808
ApoI RAATTY 2 cut(s) 44, 295
AsiGI ACCGGT 1 cut(s) 678
AspA2I CCTAGG 2 cut(s) 830, 1514
AspLEI GCGC 4 cut(s) 359, 400, 406, 879
AspS9I GGNCC 6 cut(s) 272, 332, 389, 408, 511, 1670
AsuC2I CCSGG 3 cut(s) 14, 351, 1041
AsuHPI GGTGA 3 cut(s) 580, 685, 949
AvaII GGWCC 4 cut(s) 272, 332, 408, 1670
AvrII CCTAGG 2 cut(s) 830, 1514
BaeGI GKGCMC 1 cut(s) 1513
BalI TGGCCA 1 cut(s) 518
BamHI GGATCC 1 cut(s) 1630
BanI GGYRCC 4 cut(s) 356, 397, 825, 1395
BanII GRGCYC 3 cut(s) 668, 1081, 1492
BbrPI CACGTG 1 cut(s) 1508
BbsI GAAGAC 1 cut(s) 315
Bbv12I GWGCWC 4 cut(s) 1081, 1298, 1492, 1513
BbvI GCAGC 5 cut(s) 301, 591, 631, 861, 1820
BccI CCATC 8 cut(s) 104, 368, 860, 1004, 1038, 1112, 1142, 1756
BceAI ACGGC 3 cut(s) 331, 613, 1584
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 6 cut(s) 202, 515, 942, 1074, 1393, 1674
BclI TGATCA 2 cut(s) 523, 1746
BcnI CCSGG 3 cut(s) 14, 351, 1041
BcoDI GTCTC 1 cut(s) 1748
BfaI CTAG 5 cut(s) 537, 831, 936, 1113, 1515
BfoI RGCGCY 2 cut(s) 360, 401
BfrI CTTAAG 2 cut(s) 779, 1103
BfuAI ACCTGC 1 cut(s) 986
BglII AGATCT 2 cut(s) 21, 1413
BisI GCNGC 9 cut(s) 162, 287, 290, 344, 392, 605, 620, 875, 1809
BlnI CCTAGG 2 cut(s) 830, 1514
BlsI GCNGC 9 cut(s) 163, 288, 291, 345, 393, 606, 621, 876, 1810
Bme1390I CCNGG 9 cut(s) 14, 202, 351, 515, 942, 1041, 1074, 1393, 1674
Bme18I GGWCC 4 cut(s) 272, 332, 408, 1670
BmgBI CACGTC 2 cut(s) 113, 1758
BmgT120I GGNCC 6 cut(s) 272, 332, 389, 408, 511, 1670
BmiI GGNNCC 7 cut(s) 358, 399, 627, 665, 827, 1397, 1632
BmrFI CCNGG 9 cut(s) 14, 202, 351, 515, 942, 1041, 1074, 1393, 1674
BmrI ACTGGG 3 cut(s) 1107, 1544, 1714
BmsI GCATC 2 cut(s) 247, 269
BmuI ACTGGG 3 cut(s) 1107, 1544, 1714
BpiI GAAGAC 1 cut(s) 315
BpmI CTGGAG 3 cut(s) 644, 682, 1818
Bpu10I CCTNAGC 1 cut(s) 705
BpuEI CTTGAG 2 cut(s) 1120, 1178
BpuMI CCSGG 3 cut(s) 14, 351, 1041
BsaAI YACGTR 1 cut(s) 1508
BsaHI GRCGYC 3 cut(s) 321, 357, 398
BsaJI CCNNGG 7 cut(s) 350, 498, 513, 586, 789, 830, 1514
BsaWI WCCGGW 2 cut(s) 456, 678
BsaXI ACNNNNNCTCC 8 cut(s) 437, 467, 735, 765, 854, 884, 1479, 1509
Bsc4I CCNNNNNNNGG 9 cut(s) 201, 350, 353, 622, 635, 678, 1046, 1667, 1679
Bse118I RCCGGY 4 cut(s) 394, 400, 678, 695
Bse3DI GCAATG 2 cut(s) 478, 1391
BseBI CCWGG 6 cut(s) 202, 515, 942, 1074, 1393, 1674
BseDI CCNNGG 7 cut(s) 350, 498, 513, 586, 789, 830, 1514
BseGI GGATG 9 cut(s) 96, 260, 262, 871, 892, 1049, 1123, 1767, 1894
BseLI CCNNNNNNNGG 9 cut(s) 201, 350, 353, 622, 635, 678, 1046, 1667, 1679
BseMI GCAATG 2 cut(s) 478, 1391
BseMII CTCAG 4 cut(s) 9, 719, 920, 1875
BseSI GKGCMC 1 cut(s) 1513
BseXI GCAGC 5 cut(s) 301, 591, 631, 861, 1820
BseYI CCCAGC 1 cut(s) 1851
Bsh1236I CGCG 1 cut(s) 406
Bsh1285I CGRYCG 2 cut(s) 303, 679
BshFI GGCC 6 cut(s) 391, 512, 518, 940, 984, 1057
BshNI GGYRCC 4 cut(s) 356, 397, 825, 1395
BshTI ACCGGT 1 cut(s) 678
BsiEI CGRYCG 2 cut(s) 303, 679
BsiHKAI GWGCWC 4 cut(s) 1081, 1298, 1492, 1513
BsiSI CCGG 9 cut(s) 14, 350, 395, 401, 457, 616, 679, 696, 1041
BslFI GGGAC 2 cut(s) 504, 773
BslI CCNNNNNNNGG 9 cut(s) 201, 350, 353, 622, 635, 678, 1046, 1667, 1679
BsmAI GTCTC 1 cut(s) 1748
BsmBI CGTCTC 1 cut(s) 1748
BsmFI GGGAC 2 cut(s) 504, 773
BsmI GAATGC 1 cut(s) 601
BsnI GGCC 6 cut(s) 391, 512, 518, 940, 984, 1057
Bsp1286I GDGCHC 5 cut(s) 668, 1081, 1298, 1492, 1513
BspANI GGCC 6 cut(s) 391, 512, 518, 940, 984, 1057
BspCNI CTCAG 4 cut(s) 10, 718, 919, 1876
BspFNI CGCG 1 cut(s) 406
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 7 cut(s) 358, 399, 627, 665, 827, 1397, 1632
BspMI ACCTGC 1 cut(s) 986
BspPI GGATC 8 cut(s) 981, 1181, 1215, 1460, 1625, 1638, 1766, 1811
BspT107I GGYRCC 4 cut(s) 356, 397, 825, 1395
BspTI CTTAAG 2 cut(s) 779, 1103
BsrBI CCGCTC 1 cut(s) 219
BsrDI GCAATG 2 cut(s) 478, 1391
BsrFI RCCGGY 4 cut(s) 394, 400, 678, 695
BssAI RCCGGY 4 cut(s) 394, 400, 678, 695
BssECI CCNNGG 7 cut(s) 350, 498, 513, 586, 789, 830, 1514
BssNI GRCGYC 3 cut(s) 321, 357, 398
BssT1I CCWWGG 5 cut(s) 498, 586, 789, 830, 1514
Bst2UI CCWGG 6 cut(s) 202, 515, 942, 1074, 1393, 1674
Bst4CI ACNGT 2 cut(s) 822, 1864
Bst6I CTCTTC 3 cut(s) 940, 1681, 1887
BstACI GRCGYC 3 cut(s) 321, 357, 398
BstAFI CTTAAG 2 cut(s) 779, 1103
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstBAI YACGTR 1 cut(s) 1508
BstC8I GCNNGC 2 cut(s) 396, 402
BstDEI CTNAG 5 cut(s) 18, 705, 906, 1475, 1884
BstF5I GGATG 9 cut(s) 96, 260, 262, 871, 892, 1049, 1123, 1767, 1894
BstFNI CGCG 1 cut(s) 406
BstH2I RGCGCY 2 cut(s) 360, 401
BstHHI GCGC 4 cut(s) 359, 400, 406, 879
BstMAI GTCTC 1 cut(s) 1748
BstMCI CGRYCG 2 cut(s) 303, 679
BstMWI GCNNNNNNNGC 5 cut(s) 363, 397, 625, 1149, 1805
BstNI CCWGG 6 cut(s) 202, 515, 942, 1074, 1393, 1674
BstNSI RCATGY 2 cut(s) 766, 1070
BstSCI CCNGG 9 cut(s) 12, 200, 349, 513, 940, 1039, 1072, 1391, 1672
BstSLI GKGCMC 1 cut(s) 1513
BstUI CGCG 1 cut(s) 406
BstV1I GCAGC 5 cut(s) 301, 591, 631, 861, 1820
BstV2I GAAGAC 1 cut(s) 315
BstX2I RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
BstYI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
BsuRI GGCC 6 cut(s) 391, 512, 518, 940, 984, 1057
BtrI CACGTC 2 cut(s) 113, 1758
BtsCI GGATG 9 cut(s) 96, 260, 262, 871, 892, 1049, 1123, 1767, 1894
BtsIMutI CAGTG 3 cut(s) 471, 528, 827
BveI ACCTGC 1 cut(s) 986
Cac8I GCNNGC 2 cut(s) 396, 402
CaiI CAGNNNCTG 1 cut(s) 1883
CciI TCATGA 1 cut(s) 976
CfoI GCGC 4 cut(s) 359, 400, 406, 879
Cfr10I RCCGGY 4 cut(s) 394, 400, 678, 695
Cfr13I GGNCC 6 cut(s) 272, 332, 389, 408, 511, 1670
CseI GACGC 1 cut(s) 329
Csp6I GTAC 4 cut(s) 454, 577, 1723, 1825
CspAI ACCGGT 1 cut(s) 678
CviAII CATG 6 cut(s) 763, 977, 1067, 1454, 1568, 1663
CviQI GTAC 4 cut(s) 454, 577, 1723, 1825
DdeI CTNAG 5 cut(s) 18, 705, 906, 1475, 1884
DinI GGCGCC 2 cut(s) 358, 399
DrdI GACNNNNNNGTC 1 cut(s) 279
DseDI GACNNNNNNGTC 1 cut(s) 279
EaeI YGGCCR 1 cut(s) 516
Eam1104I CTCTTC 3 cut(s) 940, 1681, 1887
EarI CTCTTC 3 cut(s) 940, 1681, 1887
EciI GGCGGA 5 cut(s) 20, 148, 211, 273, 330
Ecl136II GAGCTC 2 cut(s) 1079, 1490
Eco130I CCWWGG 5 cut(s) 498, 586, 789, 830, 1514
Eco147I AGGCCT 1 cut(s) 940
Eco24I GRGCYC 3 cut(s) 668, 1081, 1492
Eco32I GATATC 1 cut(s) 1362
Eco47I GGWCC 4 cut(s) 272, 332, 408, 1670
Eco53kI GAGCTC 2 cut(s) 1079, 1490
Eco57I CTGAAG 2 cut(s) 506, 1811
Eco72I CACGTG 1 cut(s) 1508
EcoICRI GAGCTC 2 cut(s) 1079, 1490
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 6 cut(s) 200, 513, 940, 1072, 1391, 1672
EcoRV GATATC 1 cut(s) 1362
EcoT14I CCWWGG 5 cut(s) 498, 586, 789, 830, 1514
EcoT22I ATGCAT 1 cut(s) 262
EcoT38I GRGCYC 3 cut(s) 668, 1081, 1492
EgeI GGCGCC 2 cut(s) 358, 399
EheI GGCGCC 2 cut(s) 358, 399
ErhI CCWWGG 5 cut(s) 498, 586, 789, 830, 1514
Esp3I CGTCTC 1 cut(s) 1748
FaeI CATG 6 cut(s) 766, 980, 1070, 1457, 1571, 1666
FaqI GGGAC 2 cut(s) 504, 773
FatI CATG 6 cut(s) 762, 976, 1066, 1453, 1567, 1662
FbaI TGATCA 2 cut(s) 523, 1746
Fnu4HI GCNGC 9 cut(s) 162, 287, 290, 344, 392, 605, 620, 875, 1809
FokI GGATG 8 cut(s) 83, 247, 269, 878, 899, 1056, 1130, 1774
FriOI GRGCYC 3 cut(s) 668, 1081, 1492
Fsp4HI GCNGC 9 cut(s) 162, 287, 290, 344, 392, 605, 620, 875, 1809
FspBI CTAG 5 cut(s) 537, 831, 936, 1113, 1515
FspI TGCGCA 1 cut(s) 878
GlaI GCGC 4 cut(s) 358, 399, 405, 878
GluI GCNGC 9 cut(s) 162, 287, 290, 344, 392, 605, 620, 875, 1809
GsaI CCCAGC 1 cut(s) 1855
GsuI CTGGAG 3 cut(s) 644, 682, 1818
HaeII RGCGCY 2 cut(s) 360, 401
HaeIII GGCC 6 cut(s) 391, 512, 518, 940, 984, 1057
HapII CCGG 9 cut(s) 14, 350, 395, 401, 457, 616, 679, 696, 1041
HgaI GACGC 1 cut(s) 329
HhaI GCGC 4 cut(s) 359, 400, 406, 879
Hin1I GRCGYC 3 cut(s) 321, 357, 398
Hin1II CATG 6 cut(s) 766, 980, 1070, 1457, 1571, 1666
Hin6I GCGC 4 cut(s) 357, 398, 404, 877
HinP1I GCGC 4 cut(s) 357, 398, 404, 877
HindIII AAGCTT 1 cut(s) 1708
HinfI GANTC 8 cut(s) 33, 251, 422, 428, 460, 1125, 1408, 1880
HpaII CCGG 9 cut(s) 14, 350, 395, 401, 457, 616, 679, 696, 1041
HphI GGTGA 3 cut(s) 580, 685, 949
Hpy166II GTNNAC 2 cut(s) 818, 1511
Hpy188III TCNNGA 9 cut(s) 89, 649, 725, 773, 850, 977, 1137, 1205, 1250
Hpy8I GTNNAC 2 cut(s) 818, 1511
Hpy99I CGWCG 8 cut(s) 32, 117, 317, 323, 371, 374, 634, 862
HpyAV CCTTC 7 cut(s) 186, 481, 629, 974, 1153, 1621, 1667
HpyCH4III ACNGT 2 cut(s) 822, 1864
HpyCH4IV ACGT 4 cut(s) 112, 1174, 1507, 1757
HpyF10VI GCNNNNNNNGC 5 cut(s) 363, 397, 625, 1149, 1805
HpyF3I CTNAG 5 cut(s) 18, 705, 906, 1475, 1884
HpySE526I ACGT 4 cut(s) 112, 1174, 1507, 1757
Hsp92I GRCGYC 3 cut(s) 321, 357, 398
Hsp92II CATG 6 cut(s) 766, 980, 1070, 1457, 1571, 1666
HspAI GCGC 4 cut(s) 357, 398, 404, 877
KasI GGCGCC 2 cut(s) 356, 397
KroI GCCGGC 2 cut(s) 394, 400
KroNI GCCGGC 2 cut(s) 396, 402
Ksp22I TGATCA 2 cut(s) 523, 1746
LmnI GCTCC 6 cut(s) 224, 625, 663, 1076, 1487, 1837
Lsp1109I GCAGC 5 cut(s) 301, 591, 631, 861, 1820
LweI GCATC 2 cut(s) 247, 269
MaeI CTAG 5 cut(s) 537, 831, 936, 1113, 1515
MaeII ACGT 4 cut(s) 112, 1174, 1507, 1757
MaeIII GTNAC 5 cut(s) 116, 544, 691, 725, 955
MbiI CCGCTC 1 cut(s) 219
MboII GAAGA 5 cut(s) 320, 847, 957, 1698, 1781
MfeI CAATTG 1 cut(s) 1281
MflI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
MhlI GDGCHC 5 cut(s) 668, 1081, 1298, 1492, 1513
MlsI TGGCCA 1 cut(s) 518
MluCI AATT 5 cut(s) 44, 208, 295, 1219, 1281
MluNI TGGCCA 1 cut(s) 518
Mly113I GGCGCC 2 cut(s) 357, 398
MlyI GAGTC 1 cut(s) 1874
MmeI TCCRAC 3 cut(s) 612, 840, 1493
Mox20I TGGCCA 1 cut(s) 518
Mph1103I ATGCAT 1 cut(s) 262
MreI CGCCGGCG 2 cut(s) 394, 400
MroNI GCCGGC 2 cut(s) 394, 400
MscI TGGCCA 1 cut(s) 518
MseI TTAA 5 cut(s) 753, 780, 1035, 1104, 1638
MslI CAYNNNNRTG 2 cut(s) 500, 1086
Msp20I TGGCCA 1 cut(s) 518
MspA1I CMGCKG 1 cut(s) 622
MspCI CTTAAG 2 cut(s) 779, 1103
MspI CCGG 9 cut(s) 14, 350, 395, 401, 457, 616, 679, 696, 1041
MspR9I CCNGG 9 cut(s) 14, 202, 351, 515, 942, 1041, 1074, 1393, 1674
MunI CAATTG 1 cut(s) 1281
Mva1269I GAATGC 1 cut(s) 601
MvaI CCWGG 6 cut(s) 202, 515, 942, 1074, 1393, 1674
MvnI CGCG 1 cut(s) 406
MwoI GCNNNNNNNGC 5 cut(s) 363, 397, 625, 1149, 1805
NaeI GCCGGC 2 cut(s) 396, 402
NarI GGCGCC 2 cut(s) 357, 398
NciI CCSGG 3 cut(s) 14, 351, 1041
NgoMIV GCCGGC 2 cut(s) 394, 400
NlaIII CATG 6 cut(s) 766, 980, 1070, 1457, 1571, 1666
NlaIV GGNNCC 7 cut(s) 358, 399, 627, 665, 827, 1397, 1632
NmeAIII GCCGAG 1 cut(s) 385
NmuCI GTSAC 3 cut(s) 691, 725, 955
NsbI TGCGCA 1 cut(s) 878
NsiI ATGCAT 1 cut(s) 262
NspI RCATGY 2 cut(s) 766, 1070
OliI CACNNNNGTG 1 cut(s) 500
PagI TCATGA 1 cut(s) 976
PaqCI CACCTGC 1 cut(s) 986
PceI AGGCCT 1 cut(s) 940
PciI ACATGT 2 cut(s) 762, 1066
PctI GAATGC 1 cut(s) 601
PdiI GCCGGC 2 cut(s) 396, 402
PfeI GAWTC 7 cut(s) 33, 251, 422, 428, 460, 1125, 1408
PflFI GACNNNGTC 1 cut(s) 856
PflMI CCANNNNNTGG 2 cut(s) 201, 1679
PfoI TCCNGGA 1 cut(s) 1072
PinAI ACCGGT 1 cut(s) 678
PkrI GCNGC 9 cut(s) 163, 288, 291, 345, 393, 606, 621, 876, 1810
PleI GAGTC 1 cut(s) 1874
PluTI GGCGCC 2 cut(s) 360, 401
PmaCI CACGTG 1 cut(s) 1508
PmlI CACGTG 1 cut(s) 1508
PpsI GAGTC 1 cut(s) 1874
Ppu21I YACGTR 1 cut(s) 1508
PscI ACATGT 2 cut(s) 762, 1066
Psp124BI GAGCTC 2 cut(s) 1081, 1492
Psp6I CCWGG 6 cut(s) 200, 513, 940, 1072, 1391, 1672
PspCI CACGTG 1 cut(s) 1508
PspFI CCCAGC 1 cut(s) 1851
PspGI CCWGG 6 cut(s) 200, 513, 940, 1072, 1391, 1672
PspN4I GGNNCC 7 cut(s) 358, 399, 627, 665, 827, 1397, 1632
PspPI GGNCC 6 cut(s) 272, 332, 389, 408, 511, 1670
PstNI CAGNNNCTG 1 cut(s) 1883
PsuI RGATCY 7 cut(s) 21, 1186, 1207, 1413, 1630, 1771, 1816
PsyI GACNNNGTC 1 cut(s) 856
PvuII CAGCTG 1 cut(s) 622
RsaI GTAC 4 cut(s) 455, 578, 1724, 1826
RsaNI GTAC 4 cut(s) 454, 577, 1723, 1825
RseI CAYNNNNRTG 2 cut(s) 500, 1086
SacI GAGCTC 2 cut(s) 1081, 1492
SaqAI TTAA 5 cut(s) 753, 780, 1035, 1104, 1638
SatI GCNGC 9 cut(s) 162, 287, 290, 344, 392, 605, 620, 875, 1809
Sau96I GGNCC 6 cut(s) 272, 332, 389, 408, 511, 1670
SchI GAGTC 1 cut(s) 1874
ScrFI CCNGG 9 cut(s) 14, 202, 351, 515, 942, 1041, 1074, 1393, 1674
SduI GDGCHC 5 cut(s) 668, 1081, 1298, 1492, 1513
SfaNI GCATC 2 cut(s) 247, 269
SfoI GGCGCC 2 cut(s) 358, 399
SgrAI CRCCGGYG 2 cut(s) 394, 400
SinI GGWCC 4 cut(s) 272, 332, 408, 1670
SmiMI CAYNNNNRTG 2 cut(s) 500, 1086
SmlI CTYRAG 4 cut(s) 779, 1103, 1135, 1193
SmoI CTYRAG 4 cut(s) 779, 1103, 1135, 1193
Sse9I AATT 5 cut(s) 44, 208, 295, 1219, 1281
SseBI AGGCCT 1 cut(s) 940
SspDI GGCGCC 2 cut(s) 356, 397
SspI AATATT 1 cut(s) 1237
SspMI CTAG 5 cut(s) 537, 831, 936, 1113, 1515
SstI GAGCTC 2 cut(s) 1081, 1492
StuI AGGCCT 1 cut(s) 940
StyD4I CCNGG 9 cut(s) 12, 200, 349, 513, 940, 1039, 1072, 1391, 1672
StyI CCWWGG 5 cut(s) 498, 586, 789, 830, 1514
TaaI ACNGT 2 cut(s) 822, 1864
TaiI ACGT 4 cut(s) 115, 1177, 1510, 1760
TaqI TCGA 3 cut(s) 90, 299, 1327
TaqII GACCGA 1 cut(s) 317
TasI AATT 5 cut(s) 44, 208, 295, 1219, 1281
TatI WGTACW 1 cut(s) 1824
TauI GCSGC 4 cut(s) 164, 289, 346, 394
TfiI GAWTC 7 cut(s) 33, 251, 422, 428, 460, 1125, 1408
Tru1I TTAA 5 cut(s) 753, 780, 1035, 1104, 1638
Tru9I TTAA 5 cut(s) 753, 780, 1035, 1104, 1638
TscAI CASTG 3 cut(s) 471, 535, 827
TseFI GTSAC 3 cut(s) 691, 725, 955
TseI GCWGC 5 cut(s) 289, 604, 619, 874, 1808
Tsp45I GTSAC 3 cut(s) 691, 725, 955
TspDTI ATGAA 5 cut(s) 321, 608, 993, 1196, 1745
TspGWI ACGGA 3 cut(s) 45, 744, 1003
TspRI CASTG 3 cut(s) 471, 535, 827
Tth111I GACNNNGTC 1 cut(s) 856
Van91I CCANNNNNTGG 2 cut(s) 201, 1679
Vha464I CTTAAG 2 cut(s) 779, 1103
VneI GTGCAC 1 cut(s) 1509
VpaK11BI GGWCC 4 cut(s) 272, 332, 408, 1670
XapI RAATTY 2 cut(s) 44, 295
XceI RCATGY 2 cut(s) 766, 1070
XmaJI CCTAGG 2 cut(s) 830, 1514
XspI CTAG 5 cut(s) 537, 831, 936, 1113, 1515
Zsp2I ATGCAT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.