Rh6BG294600

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0011288
Physical Location & Seq
Reverse (-)
52260391 .. 52266844
6454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG294600.1

Sequence Viewer

Length: 1515 bp
ATGGCGGACGACGCGGCCGAGATCTACGACGGAGCCAGAGCCGAATTTCCTCTCACATTCGGTATACGTAGATCCGCCCCTGCTTCTCTCACCTCCTCCTCCAAAACTTGGCTCAATTCCCTCCATACCGCCAAAACCCCCAACCCTAACCCTAGCGATTCGGATGCAACCCTTATCGGACCGCCTCGTCCACCGCAGACTAATTCGGCCTCCGAAGACGACGGCGATGCCCTTATCGGACCGCCGGCGCCGTCCGGGAGTGCCGAGAGCGACGACGATGGTGAGATGATTGGACCGCCGGCGCCGGGGAGGTCCAATAGAGACGATTGGGATTCCGATGCGGAAGAGGAGAACAAGTACCGGATTCCGGTGAGCAATGAGATTGTGCTGAAGGGACACACCAAGGTGGTTTCGGCCCTCGCCATTGATCACACTGGTTCTAGAGTTATATCTGGTAGCTATGACTACTCTGTGAGAATGTACGATTTTCAAGGAATGAATGCAAAGTTGCAATCTTTCCGGCAGCTGGAGCCGTCTGAAGGTCATCAGGTCAGAACTATAAGCTGGAGCCCCACCGCCGACCGGTTTCTGTGTGTCACCGGCTCAGCTCAGGCAAAGATTTATGATCGTGACGGACTTACGCTAGGAGAGTTTGTAAAAGGGGACATGTATATTCGTGATCTTAAGAATACCAAGGGCCATATTACTGGATTGACCTGTGGACAGTGGCACCCTAGAAAGAAAGACGAAATCTTGACATCATCGGAGGATGGGTCACTGCGCATTTGGGATGTTAATAACTTCAATACTCAGAAACAGGTAATCAAGCCAAAACTTGCTAGGCCTGGAAGAGTTCCAGTCACCACTTGTACTTGGGATCATGAAGGACAACGGATTGCAGGTGGTATAGGAGATGGTTCTATACAAGTTTGGAACATTAAGCCCGGATGGGGAAGTAGGCCGGACATACACGTTCAGGAAGCTCATTCAGATGATATTACTGGGCTTAAGTTTTCTAGGGATGGGAGAATCTTACTCTCAAGAAGCTGTGATGGCACTTTGAAGGTTTGGGACTTACGTCAGATGAAAGATCCTCTCAAGGTGTTTCAGGATCTCCCAAATAACTATGCACAAACCAATGTCGCATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACCTCAATTGAAAGGGAGAGCACAACTGGAGGTTTACTATGCTTCTTTGATCGAGCAAAACTGGAACTTGTTTCTAAAGTTGGGATATCCCCTACTTGTAGTGTTGTGCAATGTGCCTGGCACCCAAAATTGAATCAGGAGATAAAGGCCAAGGCGGAACTCATGTACTATATGATCCAACTCTTAGTGAAAGAGGAGCTCTTGTCTGCGTTGCACGTGCCCCTAGGAAAAAATCTGTTGATGATTTTGTGGCAAACCCAGTCATACACAACCCTCATGCTCTACCCTTATTTAGAGATCAACCAAGCCGTAAACGTGAGCGAGAGAAAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Band_7 WD40

Protein Analysis

504

Amino Acids

55.89

Weight (kDa)

5.79

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 125 - 211 9.3e-07 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 126 - 165 9.5e-06 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 127 - 204 1.4e-06 CDC20/Fizzy WD40 domain
WD40 PF00400 129 - 162 1e-05 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 129 - 209 3.9e-06 WDR5 beta-propeller domain
Beta-prop_EML PF23409 132 - 395 3e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 133 - 207 4.5e-06 THOC3 beta-propeller domain
Beta-prop_THOC3 PF25174 182 - 273 1.7e-07 THOC3 beta-propeller domain
WD40_Prp19 PF24814 182 - 393 1.5e-17 Prp19 WD40 domain
Beta-prop_TEP1_2nd PF25047 225 - 314 4.8e-07 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 229 - 394 4.5e-22 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 231 - 392 6.6e-10 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 232 - 395 8.6e-17 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 238 - 394 5.7e-13 CDC20/Fizzy WD40 domain
Beta-prop_Aladin PF25460 238 - 393 2.2e-08 Aladin seven-bladed propeller
Beta-prop_EML_2 PF23414 244 - 388 1.3e-11 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 246 - 360 7.3e-07 WDR55
WD40_MABP1-WDR62_2nd PF24782 247 - 359 1.9e-07 MABP1/WDR62 second WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 248 - 364 3.3e-08 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 249 - 392 9.7e-08 WDR36/Utp21 first beta-propeller
WDR90_beta-prop_4th PF23342 250 - 356 3.1e-06 WDR90, 4th beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 252 - 394 1.8e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 253 - 364 3.4e-11 TEP-1 second beta-propeller
WD40_WDHD1_1st PF24817 285 - 375 4.6e-09 WDHD1 first WD40 domain
EIF3I PF24805 286 - 377 4.6e-06 EIF3I
Beta-prop_THOC3 PF25174 287 - 435 1.8e-13 THOC3 beta-propeller domain
WD40 PF00400 323 - 358 1.6e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20330
fragaria_vesca FvH4_2g20290 FvH4_2g20290
malus_domestica MD10G1174900.v1.1
prunus_persica Prupe.8G213600_v2.0.a1
pyrus_communis pycom05g17160 pycom10g15070
rosa_chinensis RchiOBHm_Chr6g0286091 RchiOBHm_Chr6g0286201
rosa_laevigata RLG00000012583
rosa_multiflora Rmu_sc0028702.1_g000001
rosa_roxburghii Rroxscaffold_7G00182460
rosa_rugosa Rorug06G0178900
rosa_samantha Rh6AG291300 Rh6BG294600 Rh6CG294200 Rh6CG294800 Rh6DG286200 Rh6DG286800
rosa_wichuraiana Rw6G025100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 890
AasI GACNNNNNNGTC 1 cut(s) 186
Acc16I TGCGCA 1 cut(s) 782
Acc36I ACCTGC 1 cut(s) 890
AccB1I GGYRCC 4 cut(s) 247, 301, 729, 1299
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 64
AccII CGCG 1 cut(s) 14
AclWI GGATC 5 cut(s) 66, 885, 1085, 1119, 1348
AcoI YGGCCR 1 cut(s) 15
AcsI RAATTY 1 cut(s) 44
AcuI CTGAAG 2 cut(s) 410, 558
AcvI CACGTG 1 cut(s) 1396
AcyI GRCGYC 2 cut(s) 248, 302
AfaI GTAC 4 cut(s) 359, 482, 871, 1346
AfiI CCNNNNNNNGG 7 cut(s) 108, 305, 367, 526, 539, 582, 950
AflII CTTAAG 2 cut(s) 683, 1007
AflIII ACRYGT 2 cut(s) 666, 970
AgeI ACCGGT 1 cut(s) 582
AgsI TTSAA 5 cut(s) 491, 805, 1063, 1190, 1312
AjnI CCWGG 2 cut(s) 844, 1295
AleI CACNNNNGTG 1 cut(s) 404
AluBI AGCT 7 cut(s) 459, 526, 564, 608, 983, 1047, 1378
AluI AGCT 7 cut(s) 459, 526, 564, 608, 983, 1047, 1378
Alw21I GWGCWC 2 cut(s) 1202, 1380
Alw26I GTCTC 1 cut(s) 315
AlwI GGATC 5 cut(s) 66, 885, 1085, 1119, 1348
AoxI GGCC 7 cut(s) 15, 207, 414, 697, 842, 959, 1326
ApeKI GCWGC 1 cut(s) 523
ApoI RAATTY 1 cut(s) 44
AsiGI ACCGGT 1 cut(s) 582
AspA2I CCTAGG 1 cut(s) 1402
AspLEI GCGC 3 cut(s) 250, 304, 783
AspS9I GGNCC 6 cut(s) 179, 239, 293, 312, 415, 697
AsuC2I CCSGG 3 cut(s) 256, 306, 945
AsuHPI GGTGA 5 cut(s) 82, 293, 382, 589, 853
AvaII GGWCC 4 cut(s) 179, 239, 293, 312
AvrII CCTAGG 1 cut(s) 1402
BaeGI GKGCMC 1 cut(s) 1401
BanI GGYRCC 4 cut(s) 247, 301, 729, 1299
BanII GRGCYC 2 cut(s) 572, 1380
BbrPI CACGTG 1 cut(s) 1396
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 2 cut(s) 1202, 1380
BbvI GCAGC 1 cut(s) 535
BccI CCATC 6 cut(s) 272, 764, 908, 942, 1016, 1046
BceAI ACGGC 4 cut(s) 235, 238, 517, 1472
BcgI CGANNNNNNTGC 4 cut(s) 146, 180, 209, 243
BciT130I CCWGG 2 cut(s) 846, 1297
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 3 cut(s) 256, 306, 945
BcoDI GTCTC 1 cut(s) 315
BfaI CTAG 7 cut(s) 153, 441, 644, 735, 840, 1017, 1403
BfoI RGCGCY 2 cut(s) 251, 305
BfrI CTTAAG 2 cut(s) 683, 1007
BfuAI ACCTGC 1 cut(s) 890
BglII AGATCT 1 cut(s) 21
BisI GCNGC 2 cut(s) 15, 524
BlnI CCTAGG 1 cut(s) 1402
BlpI GCTNAGC 1 cut(s) 604
BlsI GCNGC 2 cut(s) 16, 525
Bme1390I CCNGG 5 cut(s) 256, 306, 846, 945, 1297
Bme18I GGWCC 4 cut(s) 179, 239, 293, 312
BmgT120I GGNCC 6 cut(s) 179, 239, 293, 312, 415, 697
BmiI GGNNCC 8 cut(s) 34, 249, 303, 531, 569, 731, 1180, 1301
BmrFI CCNGG 5 cut(s) 256, 306, 846, 945, 1297
BmrI ACTGGG 2 cut(s) 1011, 1432
BmsI GCATC 3 cut(s) 154, 217, 328
BmuI ACTGGG 2 cut(s) 1011, 1432
BoxI GACNNNNGTC 1 cut(s) 1077
BpiI GAAGAC 1 cut(s) 222
BpmI CTGGAG 3 cut(s) 548, 586, 1227
Bpu10I CCTNAGC 1 cut(s) 609
Bpu1102I GCTNAGC 1 cut(s) 604
BpuEI CTTGAG 2 cut(s) 1024, 1082
BpuMI CCSGG 3 cut(s) 256, 306, 945
BsaAI YACGTR 2 cut(s) 68, 1396
BsaHI GRCGYC 2 cut(s) 248, 302
BsaJI CCNNGG 5 cut(s) 305, 402, 693, 1329, 1402
BsaWI WCCGGW 3 cut(s) 360, 367, 582
BsaXI ACNNNNNCTCC 8 cut(s) 341, 371, 639, 669, 758, 788, 1367, 1397
Bsc4I CCNNNNNNNGG 7 cut(s) 108, 305, 367, 526, 539, 582, 950
Bse118I RCCGGY 4 cut(s) 244, 298, 582, 599
Bse1I ACTGG 8 cut(s) 439, 712, 857, 1006, 1180, 1210, 1245, 1438
Bse3DI GCAATG 2 cut(s) 382, 1295
BseBI CCWGG 2 cut(s) 846, 1297
BseDI CCNNGG 5 cut(s) 305, 402, 693, 1329, 1402
BseGI GGATG 5 cut(s) 169, 775, 796, 953, 1027
BseLI CCNNNNNNNGG 7 cut(s) 108, 305, 367, 526, 539, 582, 950
BseMI GCAATG 2 cut(s) 382, 1295
BseMII CTCAG 3 cut(s) 618, 623, 824
BseNI ACTGG 8 cut(s) 439, 712, 857, 1006, 1180, 1210, 1245, 1438
BseRI GAGGAG 4 cut(s) 85, 88, 362, 1388
BseSI GKGCMC 1 cut(s) 1401
BseX3I CGGCCG 1 cut(s) 15
BseXI GCAGC 1 cut(s) 535
Bsh1236I CGCG 1 cut(s) 14
Bsh1285I CGRYCG 2 cut(s) 18, 583
BshFI GGCC 7 cut(s) 17, 209, 416, 699, 844, 961, 1328
BshNI GGYRCC 4 cut(s) 247, 301, 729, 1299
BshTI ACCGGT 1 cut(s) 582
BsiEI CGRYCG 2 cut(s) 18, 583
BsiHKAI GWGCWC 2 cut(s) 1202, 1380
BslFI GGGAC 3 cut(s) 408, 677, 1085
BslI CCNNNNNNNGG 7 cut(s) 108, 305, 367, 526, 539, 582, 950
BsmAI GTCTC 1 cut(s) 315
BsmBI CGTCTC 1 cut(s) 315
BsmFI GGGAC 3 cut(s) 408, 677, 1085
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 7 cut(s) 17, 209, 416, 699, 844, 961, 1328
Bsp1286I GDGCHC 4 cut(s) 572, 1202, 1380, 1401
Bsp1720I GCTNAGC 1 cut(s) 604
BspANI GGCC 7 cut(s) 17, 209, 416, 699, 844, 961, 1328
BspCNI CTCAG 3 cut(s) 617, 622, 823
BspFNI CGCG 1 cut(s) 14
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 8 cut(s) 34, 249, 303, 531, 569, 731, 1180, 1301
BspMI ACCTGC 1 cut(s) 890
BspPI GGATC 5 cut(s) 66, 885, 1085, 1119, 1348
BspT107I GGYRCC 4 cut(s) 247, 301, 729, 1299
BspTI CTTAAG 2 cut(s) 683, 1007
BsrDI GCAATG 2 cut(s) 382, 1295
BsrFI RCCGGY 4 cut(s) 244, 298, 582, 599
BsrI ACTGG 8 cut(s) 439, 712, 857, 1006, 1180, 1210, 1245, 1438
BssAI RCCGGY 4 cut(s) 244, 298, 582, 599
BssECI CCNNGG 5 cut(s) 305, 402, 693, 1329, 1402
BssNAI GTATAC 1 cut(s) 65
BssNI GRCGYC 2 cut(s) 248, 302
BssT1I CCWWGG 4 cut(s) 402, 693, 1329, 1402
Bst1107I GTATAC 1 cut(s) 65
Bst2UI CCWGG 2 cut(s) 846, 1297
Bst4CI ACNGT 1 cut(s) 726
Bst6I CTCTTC 2 cut(s) 339, 844
BstACI GRCGYC 2 cut(s) 248, 302
BstAFI CTTAAG 2 cut(s) 683, 1007
BstBAI YACGTR 2 cut(s) 68, 1396
BstC8I GCNNGC 2 cut(s) 246, 300
BstDEI CTNAG 4 cut(s) 604, 609, 810, 1363
BstF5I GGATG 5 cut(s) 169, 775, 796, 953, 1027
BstFNI CGCG 1 cut(s) 14
BstH2I RGCGCY 2 cut(s) 251, 305
BstHHI GCGC 3 cut(s) 250, 304, 783
BstMAI GTCTC 1 cut(s) 315
BstMCI CGRYCG 2 cut(s) 18, 583
BstMWI GCNNNNNNNGC 3 cut(s) 11, 529, 1053
BstNI CCWGG 2 cut(s) 846, 1297
BstNSI RCATGY 1 cut(s) 670
BstPAI GACNNNNGTC 1 cut(s) 1077
BstSCI CCNGG 5 cut(s) 254, 304, 844, 943, 1295
BstSLI GKGCMC 1 cut(s) 1401
BstSNI TACGTA 1 cut(s) 68
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 1 cut(s) 535
BstV2I GAAGAC 1 cut(s) 222
BstX2I RGATCY 4 cut(s) 21, 71, 1090, 1111
BstXI CCANNNNNNTGG 1 cut(s) 707
BstYI RGATCY 4 cut(s) 21, 71, 1090, 1111
BstZ17I GTATAC 1 cut(s) 65
BstZI CGGCCG 1 cut(s) 15
BsuRI GGCC 7 cut(s) 17, 209, 416, 699, 844, 961, 1328
BtgZI GCGATG 1 cut(s) 240
BtsCI GGATG 5 cut(s) 169, 775, 796, 953, 1027
BtsI GCAGTG 1 cut(s) 776
BtsIMutI CAGTG 3 cut(s) 432, 731, 776
BveI ACCTGC 1 cut(s) 890
Cac8I GCNNGC 2 cut(s) 246, 300
CciI TCATGA 1 cut(s) 880
CfoI GCGC 3 cut(s) 250, 304, 783
Cfr10I RCCGGY 4 cut(s) 244, 298, 582, 599
Cfr13I GGNCC 6 cut(s) 179, 239, 293, 312, 415, 697
CpoI CGGWCCG 2 cut(s) 179, 239
CseI GACGC 1 cut(s) 20
Csp6I GTAC 4 cut(s) 358, 481, 870, 1345
CspAI ACCGGT 1 cut(s) 582
CspI CGGWCCG 2 cut(s) 179, 239
CviAII CATG 4 cut(s) 667, 881, 1342, 1456
CviQI GTAC 4 cut(s) 358, 481, 870, 1345
DdeI CTNAG 4 cut(s) 604, 609, 810, 1363
DinI GGCGCC 2 cut(s) 249, 303
DrdI GACNNNNNNGTC 1 cut(s) 186
DseDI GACNNNNNNGTC 1 cut(s) 186
EaeI YGGCCR 1 cut(s) 15
EagI CGGCCG 1 cut(s) 15
Eam1104I CTCTTC 2 cut(s) 339, 844
EarI CTCTTC 2 cut(s) 339, 844
EciI GGCGGA 3 cut(s) 20, 64, 1349
Ecl136II GAGCTC 1 cut(s) 1378
EclXI CGGCCG 1 cut(s) 15
Eco105I TACGTA 1 cut(s) 68
Eco130I CCWWGG 4 cut(s) 402, 693, 1329, 1402
Eco147I AGGCCT 1 cut(s) 844
Eco24I GRGCYC 2 cut(s) 572, 1380
Eco32I GATATC 1 cut(s) 1266
Eco47I GGWCC 4 cut(s) 179, 239, 293, 312
Eco52I CGGCCG 1 cut(s) 15
Eco53kI GAGCTC 1 cut(s) 1378
Eco57I CTGAAG 2 cut(s) 410, 558
Eco72I CACGTG 1 cut(s) 1396
EcoICRI GAGCTC 1 cut(s) 1378
EcoRII CCWGG 2 cut(s) 844, 1295
EcoRV GATATC 1 cut(s) 1266
EcoT14I CCWWGG 4 cut(s) 402, 693, 1329, 1402
EcoT38I GRGCYC 2 cut(s) 572, 1380
EgeI GGCGCC 2 cut(s) 249, 303
EheI GGCGCC 2 cut(s) 249, 303
ErhI CCWWGG 4 cut(s) 402, 693, 1329, 1402
Esp3I CGTCTC 1 cut(s) 315
FaeI CATG 4 cut(s) 670, 884, 1345, 1459
FaqI GGGAC 3 cut(s) 408, 677, 1085
FatI CATG 4 cut(s) 666, 880, 1341, 1455
FbaI TGATCA 1 cut(s) 427
FblI GTMKAC 1 cut(s) 64
Fnu4HI GCNGC 2 cut(s) 15, 524
FokI GGATG 5 cut(s) 176, 782, 803, 960, 1034
FriOI GRGCYC 2 cut(s) 572, 1380
Fsp4HI GCNGC 2 cut(s) 15, 524
FspBI CTAG 7 cut(s) 153, 441, 644, 735, 840, 1017, 1403
FspI TGCGCA 1 cut(s) 782
GlaI GCGC 3 cut(s) 249, 303, 782
GluI GCNGC 2 cut(s) 15, 524
GsuI CTGGAG 3 cut(s) 548, 586, 1227
HaeII RGCGCY 2 cut(s) 251, 305
HaeIII GGCC 7 cut(s) 17, 209, 416, 699, 844, 961, 1328
HgaI GACGC 1 cut(s) 20
HhaI GCGC 3 cut(s) 250, 304, 783
Hin1I GRCGYC 2 cut(s) 248, 302
Hin1II CATG 4 cut(s) 670, 884, 1345, 1459
Hin6I GCGC 3 cut(s) 248, 302, 781
HinP1I GCGC 3 cut(s) 248, 302, 781
HinfI GANTC 5 cut(s) 158, 332, 364, 1029, 1312
HphI GGTGA 5 cut(s) 82, 293, 382, 589, 853
Hpy166II GTNNAC 5 cut(s) 65, 191, 722, 1214, 1492
Hpy8I GTNNAC 5 cut(s) 65, 191, 722, 1214, 1492
Hpy99I CGWCG 5 cut(s) 14, 32, 224, 275, 278
HpyAV CCTTC 4 cut(s) 385, 533, 878, 1057
HpyCH4III ACNGT 1 cut(s) 726
HpyCH4IV ACGT 5 cut(s) 67, 972, 1078, 1395, 1494
HpyCH4V TGCA 7 cut(s) 167, 503, 511, 899, 1130, 1288, 1393
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 529, 1053
HpyF3I CTNAG 4 cut(s) 604, 609, 810, 1363
HpySE526I ACGT 5 cut(s) 67, 972, 1078, 1395, 1494
Hsp92I GRCGYC 2 cut(s) 248, 302
Hsp92II CATG 4 cut(s) 670, 884, 1345, 1459
HspAI GCGC 3 cut(s) 248, 302, 781
KasI GGCGCC 2 cut(s) 247, 301
KroI GCCGGC 2 cut(s) 244, 298
KroNI GCCGGC 2 cut(s) 246, 300
Ksp22I TGATCA 1 cut(s) 427
LmnI GCTCC 4 cut(s) 32, 529, 567, 1375
Lsp1109I GCAGC 1 cut(s) 535
LweI GCATC 3 cut(s) 154, 217, 328
MaeI CTAG 7 cut(s) 153, 441, 644, 735, 840, 1017, 1403
MaeII ACGT 5 cut(s) 67, 972, 1078, 1395, 1494
MaeIII GTNAC 4 cut(s) 595, 629, 774, 859
MboII GAAGA 3 cut(s) 227, 356, 861
MfeI CAATTG 1 cut(s) 1185
MflI RGATCY 4 cut(s) 21, 71, 1090, 1111
MhlI GDGCHC 4 cut(s) 572, 1202, 1380, 1401
MluCI AATT 5 cut(s) 44, 115, 202, 1185, 1307
Mly113I GGCGCC 2 cut(s) 248, 302
MmeI TCCRAC 1 cut(s) 1381
MreI CGCCGGCG 2 cut(s) 244, 298
MroNI GCCGGC 2 cut(s) 244, 298
MseI TTAA 4 cut(s) 684, 795, 939, 1008
MslI CAYNNNNRTG 2 cut(s) 404, 990
MspA1I CMGCKG 1 cut(s) 526
MspCI CTTAAG 2 cut(s) 683, 1007
MspR9I CCNGG 5 cut(s) 256, 306, 846, 945, 1297
MunI CAATTG 1 cut(s) 1185
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 2 cut(s) 846, 1297
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 3 cut(s) 11, 529, 1053
NaeI GCCGGC 2 cut(s) 246, 300
NarI GGCGCC 2 cut(s) 248, 302
NciI CCSGG 3 cut(s) 256, 306, 945
NgoMIV GCCGGC 2 cut(s) 244, 298
NlaIII CATG 4 cut(s) 670, 884, 1345, 1459
NlaIV GGNNCC 8 cut(s) 34, 249, 303, 531, 569, 731, 1180, 1301
NmeAIII GCCGAG 2 cut(s) 43, 289
NmuCI GTSAC 4 cut(s) 595, 629, 774, 859
NsbI TGCGCA 1 cut(s) 782
NspI RCATGY 1 cut(s) 670
OliI CACNNNNGTG 1 cut(s) 404
PagI TCATGA 1 cut(s) 880
PaqCI CACCTGC 1 cut(s) 890
PceI AGGCCT 1 cut(s) 844
PciI ACATGT 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 1 cut(s) 505
PdiI GCCGGC 2 cut(s) 246, 300
PfeI GAWTC 5 cut(s) 158, 332, 364, 1029, 1312
PflMI CCANNNNNTGG 1 cut(s) 108
PfoI TCCNGGA 1 cut(s) 254
PinAI ACCGGT 1 cut(s) 582
PkrI GCNGC 2 cut(s) 16, 525
PluTI GGCGCC 2 cut(s) 251, 305
PmaCI CACGTG 1 cut(s) 1396
PmlI CACGTG 1 cut(s) 1396
Ppu21I YACGTR 2 cut(s) 68, 1396
PscI ACATGT 1 cut(s) 666
PshAI GACNNNNGTC 1 cut(s) 1077
Psp124BI GAGCTC 1 cut(s) 1380
Psp6I CCWGG 2 cut(s) 844, 1295
PspCI CACGTG 1 cut(s) 1396
PspGI CCWGG 2 cut(s) 844, 1295
PspN4I GGNNCC 8 cut(s) 34, 249, 303, 531, 569, 731, 1180, 1301
PspPI GGNCC 6 cut(s) 179, 239, 293, 312, 415, 697
PsuI RGATCY 4 cut(s) 21, 71, 1090, 1111
PvuII CAGCTG 1 cut(s) 526
RsaI GTAC 4 cut(s) 359, 482, 871, 1346
RsaNI GTAC 4 cut(s) 358, 481, 870, 1345
RseI CAYNNNNRTG 2 cut(s) 404, 990
Rsr2I CGGWCCG 2 cut(s) 179, 239
RsrII CGGWCCG 2 cut(s) 179, 239
SacI GAGCTC 1 cut(s) 1380
SaqAI TTAA 4 cut(s) 684, 795, 939, 1008
SatI GCNGC 2 cut(s) 15, 524
Sau96I GGNCC 6 cut(s) 179, 239, 293, 312, 415, 697
ScrFI CCNGG 5 cut(s) 256, 306, 846, 945, 1297
SduI GDGCHC 4 cut(s) 572, 1202, 1380, 1401
SfaNI GCATC 3 cut(s) 154, 217, 328
SfoI GGCGCC 2 cut(s) 249, 303
SgrAI CRCCGGYG 2 cut(s) 244, 298
SinI GGWCC 4 cut(s) 179, 239, 293, 312
SmiMI CAYNNNNRTG 2 cut(s) 404, 990
SmlI CTYRAG 4 cut(s) 683, 1007, 1039, 1097
SmoI CTYRAG 4 cut(s) 683, 1007, 1039, 1097
SnaBI TACGTA 1 cut(s) 68
Sse9I AATT 5 cut(s) 44, 115, 202, 1185, 1307
SseBI AGGCCT 1 cut(s) 844
SspDI GGCGCC 2 cut(s) 247, 301
SspMI CTAG 7 cut(s) 153, 441, 644, 735, 840, 1017, 1403
SstI GAGCTC 1 cut(s) 1380
StuI AGGCCT 1 cut(s) 844
StyD4I CCNGG 5 cut(s) 254, 304, 844, 943, 1295
StyI CCWWGG 4 cut(s) 402, 693, 1329, 1402
TaaI ACNGT 1 cut(s) 726
TaiI ACGT 5 cut(s) 70, 975, 1081, 1398, 1497
TaqI TCGA 1 cut(s) 1231
TasI AATT 5 cut(s) 44, 115, 202, 1185, 1307
TatI WGTACW 2 cut(s) 869, 1344
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 5 cut(s) 158, 332, 364, 1029, 1312
Tru1I TTAA 4 cut(s) 684, 795, 939, 1008
Tru9I TTAA 4 cut(s) 684, 795, 939, 1008
TscAI CASTG 3 cut(s) 439, 731, 783
TseFI GTSAC 4 cut(s) 595, 629, 774, 859
TseI GCWGC 1 cut(s) 523
Tsp45I GTSAC 4 cut(s) 595, 629, 774, 859
TspDTI ATGAA 3 cut(s) 512, 897, 1100
TspGWI ACGGA 3 cut(s) 45, 648, 907
TspRI CASTG 3 cut(s) 439, 731, 783
Van91I CCANNNNNTGG 1 cut(s) 108
Vha464I CTTAAG 2 cut(s) 683, 1007
VpaK11BI GGWCC 4 cut(s) 179, 239, 293, 312
XapI RAATTY 1 cut(s) 44
XbaI TCTAGA 1 cut(s) 440
XceI RCATGY 1 cut(s) 670
XmaJI CCTAGG 1 cut(s) 1402
XmiI GTMKAC 1 cut(s) 64
XspI CTAG 7 cut(s) 153, 441, 644, 735, 840, 1017, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.