Rmu_sc0028702.1_g000001

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028702.1
OG0011288
Physical Location & Seq
Forward (+)
210 .. 3021
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0028702.1_g000001.1.cds

Sequence Viewer

Length: 1905 bp
atggcggacgacgcggcggagatctacgacggagccagagccgaatttcctctcacattcggtaagcaatccaaatctcaaacccctctcgaagccatccacaatacgacccgtcgtaaccagaaccttcaacaacagcaacgacaaccaccaccctcctccgccgacctcccttctctctcctcctcctccaaaacctggctcaattccctccgtaccgccaaaacccccaaccctaaccctagcgattcggatgcaacccttatcggaccgcctcgtccaccgcagcctaattcggcctccgacgacaacggcgatgcccttattggaccgcctccgccgccgcagccgtccgggagtgccgagagcgacgacgatggtgagatgattggaccgccggcgccggggaggtccaatagagacgattgggattccgatgcggaagaggagaacaagtaccggattccggtgagcaatgagattgtgctgaagggacacaccaaggtggtttcggccctcgccattgatcacactggttctagagttatatctggtagctatgactactctgtgagaatgtacgattttcaaggaatgaatgcaaagttgcaatctttccggcagctggagccgtctgaaggccatcaggtcagaactataagctggagccccaccgccgaccggtttctgtgtgtaaccggctcagctcaggcaaagatttatgatcgtgacggacttacgctaggagagtttgtcaaaggggacatgtatattcgtgatcttaagaataccaaggggcatattactggattgacctgtggacagtggcaccctagaaagaaagacgaaatcttgacatcatcggaggatgggtcactgcgcatttgggatgttaataacttcaatactcagaaacaggtaatcaagccaaaacttgctaggcctggaagagttccagtcaccacttgtacttgggatcatgaaggacaacggattgcaggtggtataggagatggttctatacaagtttggaacattaagcctggatggggaagtaggccggacatacacgttcaggaagctcattcagatgatattactgggcttaagttttctagggatgggagaatcttactctcaagaagctgtgatggcactttgaaggtttgggacttacgtcagatgaaagatcctctcaaggtgtttcaggatctcccaaataactatgcacaaaccaatgtcgcatttagtcctgatgagcaactctttctgactggaacctcaattgaaagggagagcacaactggaggtttactatgcttctttgatcgagcaaaactggaacttgtttctaaagttgggatatcccctacttgtagtgttgtgcaatgtgcctggcacccaaaattgaatcagatctttgcaacatcaggagataaaagccaaggcggaactcatgtactatatgatccaactcttagtgaaagaggagctcttgtctgcgttgcacgtgcccctaggaaaaaatctgttgatgattttgtggcaaacccagtcatacacaaccctcatgctctacccttatttagagatcaaccaagccgtaaacgtgagcgagagaaaacattgaaggatccagttaaatcccataagcctgaccttcccatgacaggaccaggctttggtggaagagttggtgcaagtaaaggaagcttattgacccagtacctaatgaagcaaggtggtatgatcaaggagacgtggatggacgaagatccaagagaagccatactgaagtatgcagatgctgcagcaaaagatccaaagtacatagctccagcttatgcagaaacccagcctgaaacagtttttgcgaaatcagactctgaggacgaggagaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Band_7 WD40

Protein Analysis

634

Amino Acids

69.85

Weight (kDa)

6.31

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20330
fragaria_vesca FvH4_2g20290 FvH4_2g20290
malus_domestica MD10G1174900.v1.1
prunus_persica Prupe.8G213600_v2.0.a1
pyrus_communis pycom05g17160 pycom10g15070
rosa_chinensis RchiOBHm_Chr6g0286091 RchiOBHm_Chr6g0286201
rosa_laevigata RLG00000012583
rosa_multiflora Rmu_sc0028702.1_g000001
rosa_roxburghii Rroxscaffold_7G00182460
rosa_rugosa Rorug06G0178900
rosa_samantha Rh6AG291300 Rh6BG294600 Rh6CG294200 Rh6CG294800 Rh6DG286200 Rh6DG286800
rosa_wichuraiana Rw6G025100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 989
AasI GACNNNNNNGTC 1 cut(s) 276
Acc16I TGCGCA 1 cut(s) 881
Acc36I ACCTGC 1 cut(s) 989
AccB1I GGYRCC 3 cut(s) 400, 828, 1398
AccB7I CCANNNNNTGG 2 cut(s) 198, 1682
AccII CGCG 1 cut(s) 14
AclWI GGATC 8 cut(s) 984, 1184, 1218, 1463, 1628, 1641, 1769, 1814
AcsI RAATTY 1 cut(s) 44
AcuI CTGAAG 3 cut(s) 509, 657, 1814
AcvI CACGTG 1 cut(s) 1511
AcyI GRCGYC 1 cut(s) 401
AfaI GTAC 7 cut(s) 217, 458, 581, 970, 1461, 1727, 1829
AfiI CCNNNNNNNGG 9 cut(s) 198, 404, 466, 625, 638, 681, 1049, 1670, 1682
AflII CTTAAG 2 cut(s) 782, 1106
AflIII ACRYGT 2 cut(s) 765, 1069
AgeI ACCGGT 1 cut(s) 681
AgsI TTSAA 7 cut(s) 131, 590, 904, 1162, 1289, 1411, 1630
AjiI CACGTC 1 cut(s) 1761
AjnI CCWGG 5 cut(s) 197, 943, 1042, 1394, 1675
AleI CACNNNNGTG 1 cut(s) 503
Alw21I GWGCWC 2 cut(s) 1301, 1495
Alw26I GTCTC 2 cut(s) 414, 1751
AlwI GGATC 8 cut(s) 984, 1184, 1218, 1463, 1628, 1641, 1769, 1814
AlwNI CAGNNNCTG 2 cut(s) 1808, 1886
AoxI GGCC 5 cut(s) 297, 513, 640, 941, 1058
ApeKI GCWGC 5 cut(s) 286, 346, 622, 1808, 1811
ApoI RAATTY 1 cut(s) 44
AsiGI ACCGGT 1 cut(s) 681
AspA2I CCTAGG 1 cut(s) 1517
AspLEI GCGC 2 cut(s) 403, 882
AspS9I GGNCC 6 cut(s) 269, 329, 392, 411, 514, 1673
AsuC2I CCSGG 2 cut(s) 355, 405
AsuHPI GGTGA 3 cut(s) 392, 481, 952
AvaII GGWCC 5 cut(s) 269, 329, 392, 411, 1673
AvrII CCTAGG 1 cut(s) 1517
BaeGI GKGCMC 1 cut(s) 1516
BamHI GGATCC 1 cut(s) 1633
BanI GGYRCC 3 cut(s) 400, 828, 1398
BanII GRGCYC 2 cut(s) 671, 1495
BbrPI CACGTG 1 cut(s) 1511
Bbv12I GWGCWC 2 cut(s) 1301, 1495
BbvI GCAGC 5 cut(s) 298, 358, 634, 1795, 1823
BccI CCATC 9 cut(s) 104, 371, 651, 863, 1007, 1041, 1115, 1145, 1759
BceAI ACGGC 4 cut(s) 328, 334, 616, 1587
BcgI CGANNNNNNTGC 2 cut(s) 236, 270
BciT130I CCWGG 5 cut(s) 199, 945, 1044, 1396, 1677
BclI TGATCA 2 cut(s) 526, 1749
BcnI CCSGG 2 cut(s) 355, 405
BcoDI GTCTC 2 cut(s) 414, 1751
BfaI CTAG 7 cut(s) 243, 540, 743, 834, 939, 1116, 1518
BfmI CTRYAG 1 cut(s) 1809
BfoI RGCGCY 1 cut(s) 404
BfrI CTTAAG 2 cut(s) 782, 1106
BfuAI ACCTGC 1 cut(s) 989
BglII AGATCT 2 cut(s) 21, 1416
BisI GCNGC 8 cut(s) 15, 287, 341, 344, 347, 623, 1809, 1812
BlnI CCTAGG 1 cut(s) 1517
BlpI GCTNAGC 1 cut(s) 703
BlsI GCNGC 8 cut(s) 16, 288, 342, 345, 348, 624, 1810, 1813
Bme1390I CCNGG 7 cut(s) 199, 355, 405, 945, 1044, 1396, 1677
Bme18I GGWCC 5 cut(s) 269, 329, 392, 411, 1673
BmgBI CACGTC 1 cut(s) 1761
BmgT120I GGNCC 6 cut(s) 269, 329, 392, 411, 514, 1673
BmiI GGNNCC 8 cut(s) 34, 402, 630, 668, 830, 1279, 1400, 1635
BmrFI CCNGG 7 cut(s) 199, 355, 405, 945, 1044, 1396, 1677
BmrI ACTGGG 3 cut(s) 1110, 1547, 1717
BmsI GCATC 4 cut(s) 244, 307, 427, 1795
BmuI ACTGGG 3 cut(s) 1110, 1547, 1717
BoxI GACNNNNGTC 1 cut(s) 1176
BpmI CTGGAG 4 cut(s) 647, 685, 1326, 1821
Bpu10I CCTNAGC 1 cut(s) 708
Bpu1102I GCTNAGC 1 cut(s) 703
BpuEI CTTGAG 2 cut(s) 1123, 1181
BpuMI CCSGG 2 cut(s) 355, 405
BsaAI YACGTR 1 cut(s) 1511
BsaHI GRCGYC 1 cut(s) 401
BsaJI CCNNGG 5 cut(s) 404, 501, 792, 1444, 1517
BsaWI WCCGGW 3 cut(s) 459, 466, 681
BsaXI ACNNNNNCTCC 8 cut(s) 440, 470, 738, 768, 857, 887, 1482, 1512
Bsc4I CCNNNNNNNGG 9 cut(s) 198, 404, 466, 625, 638, 681, 1049, 1670, 1682
Bse118I RCCGGY 3 cut(s) 397, 681, 698
Bse3DI GCAATG 2 cut(s) 481, 1394
BseBI CCWGG 5 cut(s) 199, 945, 1044, 1396, 1677
BseDI CCNNGG 5 cut(s) 404, 501, 792, 1444, 1517
BseGI GGATG 7 cut(s) 96, 259, 874, 895, 1052, 1126, 1770
BseLI CCNNNNNNNGG 9 cut(s) 198, 404, 466, 625, 638, 681, 1049, 1670, 1682
BseMI GCAATG 2 cut(s) 481, 1394
BseMII CTCAG 4 cut(s) 717, 722, 923, 1878
BseRI GAGGAG 6 cut(s) 148, 172, 175, 178, 461, 1503
BseSI GKGCMC 1 cut(s) 1516
BseXI GCAGC 5 cut(s) 298, 358, 634, 1795, 1823
BseYI CCCAGC 1 cut(s) 1854
Bsh1236I CGCG 1 cut(s) 14
Bsh1285I CGRYCG 1 cut(s) 682
BshFI GGCC 5 cut(s) 299, 515, 642, 943, 1060
BshNI GGYRCC 3 cut(s) 400, 828, 1398
BshTI ACCGGT 1 cut(s) 681
BsiEI CGRYCG 1 cut(s) 682
BsiHKAI GWGCWC 2 cut(s) 1301, 1495
BsiSI CCGG 9 cut(s) 354, 398, 404, 460, 467, 619, 682, 699, 1061
BslFI GGGAC 3 cut(s) 507, 776, 1184
BslI CCNNNNNNNGG 9 cut(s) 198, 404, 466, 625, 638, 681, 1049, 1670, 1682
BsmAI GTCTC 2 cut(s) 414, 1751
BsmBI CGTCTC 2 cut(s) 414, 1751
BsmFI GGGAC 3 cut(s) 507, 776, 1184
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 5 cut(s) 299, 515, 642, 943, 1060
Bsp1286I GDGCHC 4 cut(s) 671, 1301, 1495, 1516
Bsp1720I GCTNAGC 1 cut(s) 703
BspANI GGCC 5 cut(s) 299, 515, 642, 943, 1060
BspCNI CTCAG 4 cut(s) 716, 721, 922, 1879
BspFNI CGCG 1 cut(s) 14
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 8 cut(s) 34, 402, 630, 668, 830, 1279, 1400, 1635
BspMAI CTGCAG 1 cut(s) 1813
BspMI ACCTGC 1 cut(s) 989
BspPI GGATC 8 cut(s) 984, 1184, 1218, 1463, 1628, 1641, 1769, 1814
BspT107I GGYRCC 3 cut(s) 400, 828, 1398
BspTI CTTAAG 2 cut(s) 782, 1106
BsrDI GCAATG 2 cut(s) 481, 1394
BsrFI RCCGGY 3 cut(s) 397, 681, 698
BssAI RCCGGY 3 cut(s) 397, 681, 698
BssECI CCNNGG 5 cut(s) 404, 501, 792, 1444, 1517
BssNI GRCGYC 1 cut(s) 401
BssT1I CCWWGG 4 cut(s) 501, 792, 1444, 1517
Bst2UI CCWGG 5 cut(s) 199, 945, 1044, 1396, 1677
Bst4CI ACNGT 2 cut(s) 825, 1867
Bst6I CTCTTC 3 cut(s) 438, 943, 1684
BstACI GRCGYC 1 cut(s) 401
BstAFI CTTAAG 2 cut(s) 782, 1106
BstAPI GCANNNNNTGC 1 cut(s) 1808
BstBAI YACGTR 1 cut(s) 1511
BstC8I GCNNGC 1 cut(s) 399
BstDEI CTNAG 5 cut(s) 703, 708, 909, 1478, 1887
BstF5I GGATG 7 cut(s) 96, 259, 874, 895, 1052, 1126, 1770
BstFNI CGCG 1 cut(s) 14
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 2 cut(s) 403, 882
BstMAI GTCTC 2 cut(s) 414, 1751
BstMCI CGRYCG 1 cut(s) 682
BstMWI GCNNNNNNNGC 6 cut(s) 11, 340, 346, 628, 1152, 1808
BstNI CCWGG 5 cut(s) 199, 945, 1044, 1396, 1677
BstNSI RCATGY 1 cut(s) 769
BstPAI GACNNNNGTC 1 cut(s) 1176
BstSCI CCNGG 7 cut(s) 197, 353, 403, 943, 1042, 1394, 1675
BstSFI CTRYAG 1 cut(s) 1809
BstSLI GKGCMC 1 cut(s) 1516
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 5 cut(s) 298, 358, 634, 1795, 1823
BstX2I RGATCY 7 cut(s) 21, 1189, 1210, 1416, 1633, 1774, 1819
BstYI RGATCY 7 cut(s) 21, 1189, 1210, 1416, 1633, 1774, 1819
BsuRI GGCC 5 cut(s) 299, 515, 642, 943, 1060
BtgZI GCGATG 1 cut(s) 330
BtrI CACGTC 1 cut(s) 1761
BtsCI GGATG 7 cut(s) 96, 259, 874, 895, 1052, 1126, 1770
BtsI GCAGTG 1 cut(s) 875
BtsIMutI CAGTG 3 cut(s) 531, 830, 875
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 1 cut(s) 399
CaiI CAGNNNCTG 2 cut(s) 1808, 1886
CciI TCATGA 1 cut(s) 979
CfoI GCGC 2 cut(s) 403, 882
Cfr10I RCCGGY 3 cut(s) 397, 681, 698
Cfr13I GGNCC 6 cut(s) 269, 329, 392, 411, 514, 1673
CpoI CGGWCCG 1 cut(s) 269
CseI GACGC 1 cut(s) 20
Csp6I GTAC 7 cut(s) 216, 457, 580, 969, 1460, 1726, 1828
CspAI ACCGGT 1 cut(s) 681
CspI CGGWCCG 1 cut(s) 269
CviAII CATG 5 cut(s) 766, 980, 1457, 1571, 1666
CviQI GTAC 7 cut(s) 216, 457, 580, 969, 1460, 1726, 1828
DdeI CTNAG 5 cut(s) 703, 708, 909, 1478, 1887
DinI GGCGCC 1 cut(s) 402
DrdI GACNNNNNNGTC 1 cut(s) 276
DseDI GACNNNNNNGTC 1 cut(s) 276
Eam1104I CTCTTC 3 cut(s) 438, 943, 1684
EarI CTCTTC 3 cut(s) 438, 943, 1684
EciI GGCGGA 5 cut(s) 20, 32, 151, 327, 1464
Ecl136II GAGCTC 1 cut(s) 1493
Eco130I CCWWGG 4 cut(s) 501, 792, 1444, 1517
Eco147I AGGCCT 1 cut(s) 943
Eco24I GRGCYC 2 cut(s) 671, 1495
Eco32I GATATC 1 cut(s) 1365
Eco47I GGWCC 5 cut(s) 269, 329, 392, 411, 1673
Eco53kI GAGCTC 1 cut(s) 1493
Eco57I CTGAAG 3 cut(s) 509, 657, 1814
Eco72I CACGTG 1 cut(s) 1511
EcoICRI GAGCTC 1 cut(s) 1493
EcoRII CCWGG 5 cut(s) 197, 943, 1042, 1394, 1675
EcoRV GATATC 1 cut(s) 1365
EcoT14I CCWWGG 4 cut(s) 501, 792, 1444, 1517
EcoT38I GRGCYC 2 cut(s) 671, 1495
EgeI GGCGCC 1 cut(s) 402
EheI GGCGCC 1 cut(s) 402
ErhI CCWWGG 4 cut(s) 501, 792, 1444, 1517
Esp3I CGTCTC 2 cut(s) 414, 1751
FaeI CATG 5 cut(s) 769, 983, 1460, 1574, 1669
FaqI GGGAC 3 cut(s) 507, 776, 1184
FatI CATG 5 cut(s) 765, 979, 1456, 1570, 1665
FbaI TGATCA 2 cut(s) 526, 1749
Fnu4HI GCNGC 8 cut(s) 15, 287, 341, 344, 347, 623, 1809, 1812
FokI GGATG 7 cut(s) 83, 266, 881, 902, 1059, 1133, 1777
FriOI GRGCYC 2 cut(s) 671, 1495
Fsp4HI GCNGC 8 cut(s) 15, 287, 341, 344, 347, 623, 1809, 1812
FspBI CTAG 7 cut(s) 243, 540, 743, 834, 939, 1116, 1518
FspI TGCGCA 1 cut(s) 881
GlaI GCGC 2 cut(s) 402, 881
GluI GCNGC 8 cut(s) 15, 287, 341, 344, 347, 623, 1809, 1812
GsaI CCCAGC 1 cut(s) 1858
GsuI CTGGAG 4 cut(s) 647, 685, 1326, 1821
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 5 cut(s) 299, 515, 642, 943, 1060
HapII CCGG 9 cut(s) 354, 398, 404, 460, 467, 619, 682, 699, 1061
HgaI GACGC 1 cut(s) 20
HhaI GCGC 2 cut(s) 403, 882
Hin1I GRCGYC 1 cut(s) 401
Hin1II CATG 5 cut(s) 769, 983, 1460, 1574, 1669
Hin6I GCGC 2 cut(s) 401, 880
HinP1I GCGC 2 cut(s) 401, 880
HindIII AAGCTT 1 cut(s) 1711
HinfI GANTC 6 cut(s) 248, 431, 463, 1128, 1411, 1883
HpaII CCGG 9 cut(s) 354, 398, 404, 460, 467, 619, 682, 699, 1061
HphI GGTGA 3 cut(s) 392, 481, 952
Hpy166II GTNNAC 4 cut(s) 281, 821, 1313, 1607
Hpy8I GTNNAC 4 cut(s) 281, 821, 1313, 1607
Hpy99I CGWCG 6 cut(s) 14, 32, 117, 308, 374, 377
HpyAV CCTTC 8 cut(s) 137, 183, 484, 632, 977, 1156, 1624, 1670
HpyCH4III ACNGT 2 cut(s) 825, 1867
HpyCH4IV ACGT 5 cut(s) 1071, 1177, 1510, 1609, 1760
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 340, 346, 628, 1152, 1808
HpyF3I CTNAG 5 cut(s) 703, 708, 909, 1478, 1887
HpySE526I ACGT 5 cut(s) 1071, 1177, 1510, 1609, 1760
Hsp92I GRCGYC 1 cut(s) 401
Hsp92II CATG 5 cut(s) 769, 983, 1460, 1574, 1669
HspAI GCGC 2 cut(s) 401, 880
KasI GGCGCC 1 cut(s) 400
KroI GCCGGC 1 cut(s) 397
KroNI GCCGGC 1 cut(s) 399
Ksp22I TGATCA 2 cut(s) 526, 1749
LmnI GCTCC 5 cut(s) 32, 628, 666, 1490, 1840
Lsp1109I GCAGC 5 cut(s) 298, 358, 634, 1795, 1823
LweI GCATC 4 cut(s) 244, 307, 427, 1795
MaeI CTAG 7 cut(s) 243, 540, 743, 834, 939, 1116, 1518
MaeII ACGT 5 cut(s) 1071, 1177, 1510, 1609, 1760
MaeIII GTNAC 5 cut(s) 116, 694, 728, 873, 958
MboII GAAGA 4 cut(s) 455, 960, 1701, 1784
MfeI CAATTG 1 cut(s) 1284
MflI RGATCY 7 cut(s) 21, 1189, 1210, 1416, 1633, 1774, 1819
MhlI GDGCHC 4 cut(s) 671, 1301, 1495, 1516
MluCI AATT 5 cut(s) 44, 205, 292, 1284, 1406
Mly113I GGCGCC 1 cut(s) 401
MlyI GAGTC 1 cut(s) 1877
MmeI TCCRAC 2 cut(s) 327, 1496
MreI CGCCGGCG 1 cut(s) 397
MroNI GCCGGC 1 cut(s) 397
MseI TTAA 5 cut(s) 783, 894, 1038, 1107, 1641
MslI CAYNNNNRTG 2 cut(s) 503, 1089
MspA1I CMGCKG 1 cut(s) 625
MspCI CTTAAG 2 cut(s) 782, 1106
MspI CCGG 9 cut(s) 354, 398, 404, 460, 467, 619, 682, 699, 1061
MspR9I CCNGG 7 cut(s) 199, 355, 405, 945, 1044, 1396, 1677
MunI CAATTG 1 cut(s) 1284
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 5 cut(s) 199, 945, 1044, 1396, 1677
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 6 cut(s) 11, 340, 346, 628, 1152, 1808
NaeI GCCGGC 1 cut(s) 399
NarI GGCGCC 1 cut(s) 401
NciI CCSGG 2 cut(s) 355, 405
NgoMIV GCCGGC 1 cut(s) 397
NlaIII CATG 5 cut(s) 769, 983, 1460, 1574, 1669
NlaIV GGNNCC 8 cut(s) 34, 402, 630, 668, 830, 1279, 1400, 1635
NmeAIII GCCGAG 1 cut(s) 388
NmuCI GTSAC 3 cut(s) 728, 873, 958
NsbI TGCGCA 1 cut(s) 881
NspI RCATGY 1 cut(s) 769
OliI CACNNNNGTG 1 cut(s) 503
PagI TCATGA 1 cut(s) 979
PaqCI CACCTGC 1 cut(s) 989
PceI AGGCCT 1 cut(s) 943
PciI ACATGT 1 cut(s) 765
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PctI GAATGC 1 cut(s) 604
PdiI GCCGGC 1 cut(s) 399
PfeI GAWTC 5 cut(s) 248, 431, 463, 1128, 1411
PflMI CCANNNNNTGG 2 cut(s) 198, 1682
PfoI TCCNGGA 1 cut(s) 353
PinAI ACCGGT 1 cut(s) 681
PkrI GCNGC 8 cut(s) 16, 288, 342, 345, 348, 624, 1810, 1813
PleI GAGTC 1 cut(s) 1877
PluTI GGCGCC 1 cut(s) 404
PmaCI CACGTG 1 cut(s) 1511
PmlI CACGTG 1 cut(s) 1511
PpsI GAGTC 1 cut(s) 1877
Ppu21I YACGTR 1 cut(s) 1511
PscI ACATGT 1 cut(s) 765
PshAI GACNNNNGTC 1 cut(s) 1176
Psp124BI GAGCTC 1 cut(s) 1495
Psp6I CCWGG 5 cut(s) 197, 943, 1042, 1394, 1675
PspCI CACGTG 1 cut(s) 1511
PspFI CCCAGC 1 cut(s) 1854
PspGI CCWGG 5 cut(s) 197, 943, 1042, 1394, 1675
PspN4I GGNNCC 8 cut(s) 34, 402, 630, 668, 830, 1279, 1400, 1635
PspPI GGNCC 6 cut(s) 269, 329, 392, 411, 514, 1673
PstI CTGCAG 1 cut(s) 1813
PstNI CAGNNNCTG 2 cut(s) 1808, 1886
PsuI RGATCY 7 cut(s) 21, 1189, 1210, 1416, 1633, 1774, 1819
PvuII CAGCTG 1 cut(s) 625
RsaI GTAC 7 cut(s) 217, 458, 581, 970, 1461, 1727, 1829
RsaNI GTAC 7 cut(s) 216, 457, 580, 969, 1460, 1726, 1828
RseI CAYNNNNRTG 2 cut(s) 503, 1089
Rsr2I CGGWCCG 1 cut(s) 269
RsrII CGGWCCG 1 cut(s) 269
SacI GAGCTC 1 cut(s) 1495
SaqAI TTAA 5 cut(s) 783, 894, 1038, 1107, 1641
SatI GCNGC 8 cut(s) 15, 287, 341, 344, 347, 623, 1809, 1812
Sau96I GGNCC 6 cut(s) 269, 329, 392, 411, 514, 1673
SchI GAGTC 1 cut(s) 1877
ScrFI CCNGG 7 cut(s) 199, 355, 405, 945, 1044, 1396, 1677
SduI GDGCHC 4 cut(s) 671, 1301, 1495, 1516
SfaNI GCATC 4 cut(s) 244, 307, 427, 1795
SfcI CTRYAG 1 cut(s) 1809
SfoI GGCGCC 1 cut(s) 402
SgrAI CRCCGGYG 1 cut(s) 397
SinI GGWCC 5 cut(s) 269, 329, 392, 411, 1673
SmiMI CAYNNNNRTG 2 cut(s) 503, 1089
SmlI CTYRAG 4 cut(s) 782, 1106, 1138, 1196
SmoI CTYRAG 4 cut(s) 782, 1106, 1138, 1196
Sse9I AATT 5 cut(s) 44, 205, 292, 1284, 1406
SseBI AGGCCT 1 cut(s) 943
SspDI GGCGCC 1 cut(s) 400
SspMI CTAG 7 cut(s) 243, 540, 743, 834, 939, 1116, 1518
SstI GAGCTC 1 cut(s) 1495
StuI AGGCCT 1 cut(s) 943
StyD4I CCNGG 7 cut(s) 197, 353, 403, 943, 1042, 1394, 1675
StyI CCWWGG 4 cut(s) 501, 792, 1444, 1517
TaaI ACNGT 2 cut(s) 825, 1867
TaiI ACGT 5 cut(s) 1074, 1180, 1513, 1612, 1763
TaqI TCGA 2 cut(s) 90, 1330
TasI AATT 5 cut(s) 44, 205, 292, 1284, 1406
TatI WGTACW 3 cut(s) 968, 1459, 1827
TauI GCSGC 3 cut(s) 17, 343, 346
TfiI GAWTC 5 cut(s) 248, 431, 463, 1128, 1411
Tru1I TTAA 5 cut(s) 783, 894, 1038, 1107, 1641
Tru9I TTAA 5 cut(s) 783, 894, 1038, 1107, 1641
TscAI CASTG 3 cut(s) 538, 830, 882
TseFI GTSAC 3 cut(s) 728, 873, 958
TseI GCWGC 5 cut(s) 286, 346, 622, 1808, 1811
Tsp45I GTSAC 3 cut(s) 728, 873, 958
TspDTI ATGAA 4 cut(s) 611, 996, 1199, 1748
TspGWI ACGGA 4 cut(s) 45, 203, 747, 1006
TspRI CASTG 3 cut(s) 538, 830, 882
Van91I CCANNNNNTGG 2 cut(s) 198, 1682
Vha464I CTTAAG 2 cut(s) 782, 1106
VpaK11BI GGWCC 5 cut(s) 269, 329, 392, 411, 1673
XapI RAATTY 1 cut(s) 44
XbaI TCTAGA 1 cut(s) 539
XceI RCATGY 1 cut(s) 769
XmaJI CCTAGG 1 cut(s) 1517
XspI CTAG 7 cut(s) 243, 540, 743, 834, 939, 1116, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.