Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002722

Physical Location & Seq

Genomic Coordinates Forward (+)

26729875 .. 26732746

Gene Structure 2872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g36530.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGCTCGTAATAAAGCAGCATATGATCACTGGCTTATCATGCTATGTATTGTAGTATTTGCTAGCTCATCATGTTCTGCAACTGAAGGTGAAGGTGTCACACTCATGAATTTCAAGAATTCACTATCCAATACCTCGGCGTTAGATAACTGGAATGTTACCTCTAGAAATCCCTGCAACAATTCCCAGCCCCTTTGGGCGGGTGTGCTTTGCAACAACGGAAGCGTATACGGGCTGCAGCTGCAGAGCATGGGACTAACTGGCCTGATCGACATCGACACGCTCACACAGTTGCCAGCCTTCAAGACCATAAGCGTCATGAACAACGGCTTTAGAGGTCCACTGCCTGATGTGAAGAGACTTGCACTCATTAGTGTCTACTTATCGCAGAACCAATTCTCCGGTGATATTCCTGAAGACGCGTTCAGCGGCATGGGTGGTACCTTGAAGAAGGTTTACTTGGCCAAAAATGGATTTACGGGGAAGATACCAAGTTCTTTGGTTGCTTTGCCTAAGCTCGTGGAGTTGGACCTTGGGGATAACCAGTTTAGTGGCAAGATACCAAATTTTCAATCAAGGACCTGGGTGACGTTAAATCTGGCAAACAATAGATTCGAGGGTCAGATTCCGGCATCACTGAGAAATGAAAATCCAGCCGATTTTGCGGGAAACAAAGGTTTGTGCGGACCGCCTCTTGGCAAATGCAAGTCCAAATTGAAGAGACTCCTCCTAATCATAGCCATCGTAGTCATCTCAGTGGCCGTACTATTGTTGGCGCTCTGGTTGATCACCTCAATCCGAGGCAGTCGGGCTCGAAGTGCTCGTGAAGCCCGGCAAGCCCGATCGGCGCAAGAAAAGGTCGAAATGAAACCAGTAGGTCGTAAAACCCGGGGAGTATTGGAGGCGCAACTACCCGACCCGGTGGCAGACGATGAGTACAAGAAGGCAGAGAAAGCAGGGGAGTTGCATTTTCTGCGGAAGGACAGAGAGAAGTTTGAGGTACAAGAGCTACTTAGGGCACCAGCTGAGGTACTTGGGAGTGGGAGCTTTGGTTCGTCTTACAAGGCTGGTCTTTTGAGTGGGTCTATGGTTGTGAAGAGGTTTAGGGATATGAATAGAGTTGGCAAAGATGACTTCTATGATCACATGAGTAGACTTGGAAGGTTGTCACACCCTAATCTGCTACCACTCGTTGCCTTCTATTACATGAAAGAAGAGAAACTCTTGGTTCATGACTTTGTTCTAAACGGAAGCTTGGCTAGTCATCTCCATGCTAAGCGAGCACCGGGGCAACCAGGGCTCGATTGGCCGACGCGCCTGATGATCATCAAAGGAGTAGCGAGAGGCCTAGGCTACCTCTACAAAGAGTTCCCGGGGATGCCAGTCCCCCACGGCCACCTCAAGTCCTCCAACGTCCTCCTCGACCACAACCTCAACCCGGTCCTAGCCGAATACGCCCTAATCCCCGTCATCAACAAAGAACACGCACACAAGCTCATGGTCGCCTACAAGTCCCCCGAGTTCTCACAAACTGGCCGCACCTCCAAGAAGACCGACGTCTGGAGCCTCGGCATCCTCATCTTCGAAATGCTGACCGGAAAGTTCCCCGCGAACTACCTCCAACAGGGGAAGCGTGCCAACGCCGACCTCGCCAGCTGGGTGAACTCGGTGGTGAGGGAGGAGTGGACGGGTGAGGTTTTCGATAAGGAAATGAAGGGGACGAAGAATGGAGAAGGTGAGATGCTGAAGCTGTTGAAGATAGGGATGTGCTGCTGTGAGAATAGCGTTGAAGGGAGGTGGGATTGGAGAGAGGCGGTGGATAAGATCGAGGAGTTGCAGGAGAGGGACAGTGAGGAAGAAGACTACTCGTCGTACGCGAGTGATGGGGATGTGTACTCGTCTAGGGCTGTGACTGATGATGACTTCTCCTTCTCCATTGCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

649

Amino Acids

71.76

Weight (kDa)

8.71

Isoelectric Point (pI)

32.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 72	2.9e-07	Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr	PF07714	343 - 541	4.3e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	343 - 604	2.7e-23	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002722)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50610 AT3G20190 AT3G20190
fragaria_vesca	FvH4_2g36521 FvH4_2g36530 FvH4_6g36540
malus_domestica	MD08G1125100.v1.1 MD08G1125200.v1.1 MD09G1167500.v1.1 MD15G1104700.v1.1 MD17G1160800.v1.1
prunus_persica	Prupe.1G456700_v2.0.a1 Prupe.1G456800_v2.0.a1 Prupe.3G025500_v2.0.a1
pyrus_communis	pycom08g10400 pycom09g08500 pycom15g09530 pycom17g15310
rosa_chinensis	RchiOBHm_Chr2g0149011 RchiOBHm_Chr6g0305321 RchiOBHm_Chr6g0305341
rosa_laevigata	RLG00000010898 RLG00000010899 RLG00000020362
rosa_multiflora	Rmu_sc0007360.1_g000007 Rmu_ssc0000148.1_g000003
rosa_roxburghii	Rroxscaffold_7G00162890 Rroxscaffold_7G00162900
rosa_rugosa	Rorug02G0408600 Rorug06G0339600 Rorug06G0339700.1
rosa_samantha	Rh2AG467900 Rh2BG480700 Rh2CG454300 Rh2DG489600 Rh6AG451200 Rh6AG451400
rosa_wichuraiana	Rw2G038120 Rw6G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1560
Acc65I	GGTACC	1 cut(s)	440
AccB1I	GGYRCC	2 cut(s)	440, 1018
AccI	GTMKAC	3 cut(s)	228, 378, 1153
AccII	CGCG	4 cut(s)	422, 1315, 1610, 1877
AciI	CCGC	9 cut(s)	200, 429, 665, 684, 689, 976, 1537, 1608, 1814
AcoI	YGGCCR	5 cut(s)	462, 759, 1307, 1393, 1534
AcsI	RAATTY	3 cut(s)	109, 118, 565
AcuI	CTGAAG	3 cut(s)	105, 435, 1766
AcyI	GRCGYC	1 cut(s)	1557
AfaI	GTAC	7 cut(s)	442, 765, 938, 1002, 1032, 1874, 1895
AfiI	CCNNNNNNNGG	5 cut(s)	199, 695, 1438, 1560, 1624
AflIII	ACRYGT	1 cut(s)	420
AgsI	TTSAA	7 cut(s)	115, 304, 448, 572, 718, 1756, 1790
AhdI	GACNNNNNGTC	1 cut(s)	1867
AjnI	CCWGG	2 cut(s)	581, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	443, 475
AloI	GAACNNNNNNTCC	4 cut(s)	383, 415, 1036, 1068
Alw21I	GWGCWC	2 cut(s)	823, 1285
Alw26I	GTCTC	2 cut(s)	352, 715
Ama87I	CYCGRG	3 cut(s)	888, 1372, 1517
AoxI	GGCC	7 cut(s)	262, 462, 759, 1307, 1345, 1393, 1534
ApeKI	GCWGC	6 cut(s)	17, 235, 238, 241, 1770, 1940
ApoI	RAATTY	3 cut(s)	109, 118, 565
Asp700I	GAANNNNTTC	1 cut(s)	395
Asp718I	GGTACC	1 cut(s)	440
AspA2I	CCTAGG	1 cut(s)	1348
AspLEI	GCGC	4 cut(s)	778, 850, 907, 1317
AspS9I	GGNCC	5 cut(s)	338, 529, 579, 686, 1441
AsuC2I	CCSGG	8 cut(s)	832, 889, 890, 920, 1287, 1373, 1374, 1439
AsuHPI	GGTGA	8 cut(s)	101, 416, 598, 781, 1672, 1684, 1703, 1748
AsuII	TTCGAA	1 cut(s)	1584
AsuNHI	GCTAGC	1 cut(s)	62
AvaI	CYCGRG	3 cut(s)	888, 1372, 1517
AvaII	GGWCC	5 cut(s)	338, 529, 579, 686, 1441
AvrII	CCTAGG	1 cut(s)	1348
BaeGI	GKGCMC	1 cut(s)	1021
BalI	TGGCCA	1 cut(s)	464
BanI	GGYRCC	2 cut(s)	440, 1018
BanII	GRGCYC	2 cut(s)	814, 1302
BarI	GAAGNNNNNNTAC	2 cut(s)	440, 472
BauI	CACGAG	2 cut(s)	518, 822
BbsI	GAAGAC	3 cut(s)	423, 1556, 1866
Bbv12I	GWGCWC	2 cut(s)	823, 1285
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	5 cut(s)	29, 222, 228, 250, 1757
BccI	CCATC	2 cut(s)	749, 1877
BceAI	ACGGC	3 cut(s)	343, 746, 1408
BciT130I	CCWGG	2 cut(s)	583, 1296
BclI	TGATCA	4 cut(s)	25, 786, 1141, 1323
BcnI	CCSGG	8 cut(s)	832, 889, 890, 920, 1287, 1373, 1374, 1439
BcoDI	GTCTC	2 cut(s)	352, 715
BfaI	CTAG	6 cut(s)	63, 165, 1260, 1349, 1445, 1902
BfmI	CTRYAG	2 cut(s)	236, 242
BfoI	RGCGCY	1 cut(s)	779
BglI	GCCNNNNNGGC	1 cut(s)	845
BisI	GCNGC	8 cut(s)	18, 236, 239, 242, 430, 1537, 1771, 1941
BlnI	CCTAGG	1 cut(s)	1348
BlpI	GCTNAGC	1 cut(s)	1275
BlsI	GCNGC	8 cut(s)	19, 237, 240, 243, 431, 1538, 1772, 1942
Bme18I	GGWCC	5 cut(s)	338, 529, 579, 686, 1441
BmeRI	GACNNNNNGTC	1 cut(s)	1867
BmeT110I	CYCGRG	3 cut(s)	888, 1372, 1517
BmgT120I	GGNCC	5 cut(s)	338, 529, 579, 686, 1441
BmiI	GGNNCC	3 cut(s)	442, 1020, 1565
BmsI	GCATC	4 cut(s)	641, 1368, 1581, 1731
BmtI	GCTAGC	1 cut(s)	66
BoxI	GACNNNNGTC	1 cut(s)	1556
BpiI	GAAGAC	3 cut(s)	423, 1556, 1866
BpmI	CTGGAG	1 cut(s)	1582
Bpu10I	CCTNAGC	2 cut(s)	513, 1026
Bpu1102I	GCTNAGC	1 cut(s)	1275
Bpu14I	TTCGAA	1 cut(s)	1584
BpuEI	CTTGAG	1 cut(s)	1385
BpuMI	CCSGG	8 cut(s)	832, 889, 890, 920, 1287, 1373, 1374, 1439
BsaBI	GATNNNNATC	2 cut(s)	272, 1325
BsaHI	GRCGYC	1 cut(s)	1557
BsaWI	WCCGGW	2 cut(s)	401, 1595
BsaXI	ACNNNNNCTCC	4 cut(s)	383, 413, 1036, 1066
Bsc4I	CCNNNNNNNGG	5 cut(s)	199, 695, 1438, 1560, 1624
Bse1I	ACTGG	7 cut(s)	35, 155, 265, 544, 872, 1382, 1537
Bse3DI	GCAATG	1 cut(s)	1935
Bse8I	GATNNNNATC	2 cut(s)	272, 1325
BseBI	CCWGG	2 cut(s)	583, 1296
BseGI	GGATG	4 cut(s)	1383, 1572, 1770, 1894
BseJI	GATNNNNATC	2 cut(s)	272, 1325
BseLI	CCNNNNNNNGG	5 cut(s)	199, 695, 1438, 1560, 1624
BseMI	GCAATG	1 cut(s)	1935
BseMII	CTCAG	3 cut(s)	629, 768, 1017
BseNI	ACTGG	7 cut(s)	35, 155, 265, 544, 872, 1382, 1537
BseRI	GAGGAG	4 cut(s)	716, 1409, 1694, 1844
BseSI	GKGCMC	1 cut(s)	1021
BseXI	GCAGC	5 cut(s)	29, 222, 228, 250, 1757
BseYI	CCCAGC	2 cut(s)	186, 1656
Bsh1236I	CGCG	4 cut(s)	422, 1315, 1610, 1877
Bsh1285I	CGRYCG	1 cut(s)	845
BshFI	GGCC	7 cut(s)	264, 464, 761, 1309, 1347, 1395, 1536
BshNI	GGYRCC	2 cut(s)	440, 1018
BsiEI	CGRYCG	1 cut(s)	845
BsiHKAI	GWGCWC	2 cut(s)	823, 1285
BsiHKCI	CYCGRG	3 cut(s)	888, 1372, 1517
BsiSI	CCGG	9 cut(s)	402, 629, 832, 889, 920, 1286, 1373, 1439, 1596
BsiWI	CGTACG	1 cut(s)	1872
BslFI	GGGAC	5 cut(s)	267, 1370, 1498, 1732, 1859
BslI	CCNNNNNNNGG	5 cut(s)	199, 695, 1438, 1560, 1624
BsmAI	GTCTC	2 cut(s)	352, 715
BsmFI	GGGAC	5 cut(s)	267, 1370, 1498, 1732, 1859
BsnI	GGCC	7 cut(s)	264, 464, 761, 1309, 1347, 1395, 1536
BsoBI	CYCGRG	3 cut(s)	888, 1372, 1517
Bsp119I	TTCGAA	1 cut(s)	1584
Bsp1286I	GDGCHC	5 cut(s)	814, 823, 1021, 1285, 1302
Bsp143I	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
Bsp1720I	GCTNAGC	1 cut(s)	1275
BspACI	CCGC	9 cut(s)	200, 429, 665, 684, 689, 976, 1537, 1608, 1814
BspANI	GGCC	7 cut(s)	264, 464, 761, 1309, 1347, 1395, 1536
BspCNI	CTCAG	3 cut(s)	630, 767, 1018
BspFNI	CGCG	4 cut(s)	422, 1315, 1610, 1877
BspHI	TCATGA	3 cut(s)	105, 318, 1231
BspLI	GGNNCC	3 cut(s)	442, 1020, 1565
BspMAI	CTGCAG	2 cut(s)	240, 246
BspOI	GCTAGC	1 cut(s)	66
BspT104I	TTCGAA	1 cut(s)	1584
BspT107I	GGYRCC	2 cut(s)	440, 1018
BsrDI	GCAATG	1 cut(s)	1935
BsrI	ACTGG	7 cut(s)	35, 155, 265, 544, 872, 1382, 1537
BssMI	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
BssNAI	GTATAC	1 cut(s)	229
BssNI	GRCGYC	1 cut(s)	1557
BssSI	CACGAG	2 cut(s)	518, 822
BssT1I	CCWWGG	2 cut(s)	532, 1348
Bst1107I	GTATAC	1 cut(s)	229
Bst2BI	CACGAG	2 cut(s)	518, 822
Bst2UI	CCWGG	2 cut(s)	583, 1296
Bst4CI	ACNGT	2 cut(s)	291, 1850
Bst6I	CTCTTC	4 cut(s)	350, 713, 1091, 1209
BstACI	GRCGYC	1 cut(s)	1557
BstAPI	GCANNNNNTGC	1 cut(s)	973
BstBI	TTCGAA	1 cut(s)	1584
BstC8I	GCNNGC	6 cut(s)	64, 297, 837, 1281, 1635, 1654
BstDEI	CTNAG	6 cut(s)	513, 638, 754, 1013, 1026, 1275
BstDSI	CCRYGG	1 cut(s)	1390
BstENI	CCTNNNNNAGG	1 cut(s)	1622
BstF5I	GGATG	4 cut(s)	1383, 1572, 1770, 1894
BstFNI	CGCG	4 cut(s)	422, 1315, 1610, 1877
BstH2I	RGCGCY	1 cut(s)	779
BstHHI	GCGC	4 cut(s)	778, 850, 907, 1317
BstKTI	GATC	7 cut(s)	28, 270, 789, 845, 1144, 1326, 1827
BstMAI	GTCTC	2 cut(s)	352, 715
BstMBI	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
BstMCI	CGRYCG	1 cut(s)	845
BstNI	CCWGG	2 cut(s)	583, 1296
BstPAI	GACNNNNGTC	1 cut(s)	1556
BstSFI	CTRYAG	2 cut(s)	236, 242
BstSLI	GKGCMC	1 cut(s)	1021
BstUI	CGCG	4 cut(s)	422, 1315, 1610, 1877
BstV1I	GCAGC	5 cut(s)	29, 222, 228, 250, 1757
BstV2I	GAAGAC	3 cut(s)	423, 1556, 1866
BstXI	CCANNNNNNTGG	1 cut(s)	551
BstZ17I	GTATAC	1 cut(s)	229
BsuRI	GGCC	7 cut(s)	264, 464, 761, 1309, 1347, 1395, 1536
BtgI	CCRYGG	1 cut(s)	1390
BtsCI	GGATG	4 cut(s)	1383, 1572, 1770, 1894
BtsI	GCAGTG	1 cut(s)	341
BtsIMutI	CAGTG	5 cut(s)	28, 341, 635, 762, 1855
Cac8I	GCNNGC	6 cut(s)	64, 297, 837, 1281, 1635, 1654
CciI	TCATGA	3 cut(s)	105, 318, 1231
CfoI	GCGC	4 cut(s)	778, 850, 907, 1317
Cfr13I	GGNCC	5 cut(s)	338, 529, 579, 686, 1441
Cfr9I	CCCGGG	2 cut(s)	888, 1372
CpoI	CGGWCCG	1 cut(s)	686
CseI	GACGC	3 cut(s)	304, 428, 1321
Csp6I	GTAC	7 cut(s)	441, 764, 937, 1001, 1031, 1873, 1894
CspI	CGGWCCG	1 cut(s)	686
CviQI	GTAC	7 cut(s)	441, 764, 937, 1001, 1031, 1873, 1894
DdeI	CTNAG	6 cut(s)	513, 638, 754, 1013, 1026, 1275
DpnI	GATC	7 cut(s)	27, 269, 788, 844, 1143, 1325, 1826
DpnII	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
DriI	GACNNNNNGTC	1 cut(s)	1867
EaeI	YGGCCR	5 cut(s)	462, 759, 1307, 1393, 1534
Eam1104I	CTCTTC	4 cut(s)	350, 713, 1091, 1209
Eam1105I	GACNNNNNGTC	1 cut(s)	1867
EarI	CTCTTC	4 cut(s)	350, 713, 1091, 1209
Eco130I	CCWWGG	2 cut(s)	532, 1348
Eco147I	AGGCCT	1 cut(s)	1347
Eco24I	GRGCYC	2 cut(s)	814, 1302
Eco47I	GGWCC	5 cut(s)	338, 529, 579, 686, 1441
Eco57I	CTGAAG	3 cut(s)	105, 435, 1766
Eco88I	CYCGRG	3 cut(s)	888, 1372, 1517
EcoNI	CCTNNNNNAGG	1 cut(s)	1622
EcoO109I	RGGNCCY	1 cut(s)	579
EcoRI	GAATTC	1 cut(s)	118
EcoRII	CCWGG	2 cut(s)	581, 1294
EcoT14I	CCWWGG	2 cut(s)	532, 1348
EcoT38I	GRGCYC	2 cut(s)	814, 1302
ErhI	CCWWGG	2 cut(s)	532, 1348
FalI	AAGNNNNNCTT	4 cut(s)	443, 475, 996, 1028
FaqI	GGGAC	5 cut(s)	267, 1370, 1498, 1732, 1859
FauI	CCCGC	3 cut(s)	193, 658, 1615
FauNDI	CATATG	1 cut(s)	22
FbaI	TGATCA	4 cut(s)	25, 786, 1141, 1323
FblI	GTMKAC	3 cut(s)	228, 378, 1153
Fnu4HI	GCNGC	8 cut(s)	18, 236, 239, 242, 430, 1537, 1771, 1941
FokI	GGATG	4 cut(s)	1390, 1559, 1777, 1901
FriOI	GRGCYC	2 cut(s)	814, 1302
Fsp4HI	GCNGC	8 cut(s)	18, 236, 239, 242, 430, 1537, 1771, 1941
FspBI	CTAG	6 cut(s)	63, 165, 1260, 1349, 1445, 1902
GlaI	GCGC	4 cut(s)	777, 849, 906, 1316
GluI	GCNGC	8 cut(s)	18, 236, 239, 242, 430, 1537, 1771, 1941
GsaI	CCCAGC	2 cut(s)	190, 1660
GsuI	CTGGAG	1 cut(s)	1582
HaeII	RGCGCY	1 cut(s)	779
HaeIII	GGCC	7 cut(s)	264, 464, 761, 1309, 1347, 1395, 1536
HapII	CCGG	9 cut(s)	402, 629, 832, 889, 920, 1286, 1373, 1439, 1596
HgaI	GACGC	3 cut(s)	304, 428, 1321
HhaI	GCGC	4 cut(s)	778, 850, 907, 1317
Hin1I	GRCGYC	1 cut(s)	1557
Hin6I	GCGC	4 cut(s)	776, 848, 905, 1315
HinP1I	GCGC	4 cut(s)	776, 848, 905, 1315
HindIII	AAGCTT	1 cut(s)	1252
HinfI	GANTC	3 cut(s)	612, 625, 723
HpaII	CCGG	9 cut(s)	402, 629, 832, 889, 920, 1286, 1373, 1439, 1596
HphI	GGTGA	8 cut(s)	101, 416, 598, 781, 1672, 1684, 1703, 1748
Hpy166II	GTNNAC	8 cut(s)	229, 341, 379, 457, 1154, 1663, 1686, 1894
Hpy188I	TCNGA	2 cut(s)	624, 800
Hpy188III	TCNNGA	9 cut(s)	106, 115, 165, 304, 319, 413, 824, 1232, 1561
Hpy8I	GTNNAC	8 cut(s)	229, 341, 379, 457, 1154, 1663, 1686, 1894
Hpy99I	CGWCG	3 cut(s)	1315, 1559, 1873
HpyCH4III	ACNGT	2 cut(s)	291, 1850
HpyCH4IV	ACGT	3 cut(s)	590, 1413, 1557
HpyF3I	CTNAG	6 cut(s)	513, 638, 754, 1013, 1026, 1275
HpySE526I	ACGT	3 cut(s)	590, 1413, 1557
Hsp92I	GRCGYC	1 cut(s)	1557
HspAI	GCGC	4 cut(s)	776, 848, 905, 1315
KpnI	GGTACC	1 cut(s)	444
Ksp22I	TGATCA	4 cut(s)	25, 786, 1141, 1323
Kzo9I	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
LmnI	GCTCC	2 cut(s)	1044, 1563
Lsp1109I	GCAGC	5 cut(s)	29, 222, 228, 250, 1757
LweI	GCATC	4 cut(s)	641, 1368, 1581, 1731
MaeI	CTAG	6 cut(s)	63, 165, 1260, 1349, 1445, 1902
MaeII	ACGT	3 cut(s)	590, 1413, 1557
MaeIII	GTNAC	5 cut(s)	97, 157, 586, 1167, 1909
MalI	GATC	7 cut(s)	27, 269, 788, 844, 1143, 1325, 1826
MboI	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
MhlI	GDGCHC	5 cut(s)	814, 823, 1021, 1285, 1302
MlsI	TGGCCA	1 cut(s)	464
MluCI	AATT	6 cut(s)	109, 118, 181, 395, 565, 713
MluI	ACGCGT	1 cut(s)	420
MluNI	TGGCCA	1 cut(s)	464
MlyI	GAGTC	1 cut(s)	717
MmeI	TCCRAC	3 cut(s)	507, 1434, 1645
Mox20I	TGGCCA	1 cut(s)	464
MroXI	GAANNNNTTC	1 cut(s)	395
MscI	TGGCCA	1 cut(s)	464
MseI	TTAA	1 cut(s)	593
MslI	CAYNNNNRTG	3 cut(s)	104, 755, 1269
Msp20I	TGGCCA	1 cut(s)	464
MspA1I	CMGCKG	4 cut(s)	241, 429, 1025, 1656
MspI	CCGG	9 cut(s)	402, 629, 832, 889, 920, 1286, 1373, 1439, 1596
MvaI	CCWGG	2 cut(s)	583, 1296
MvnI	CGCG	4 cut(s)	422, 1315, 1610, 1877
NciI	CCSGG	8 cut(s)	832, 889, 890, 920, 1287, 1373, 1374, 1439
NdeI	CATATG	1 cut(s)	22
NdeII	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
NheI	GCTAGC	1 cut(s)	62
NlaIV	GGNNCC	3 cut(s)	442, 1020, 1565
NmeAIII	GCCGAG	2 cut(s)	116, 1548
NmuCI	GTSAC	4 cut(s)	97, 586, 1167, 1909
NspV	TTCGAA	1 cut(s)	1584
PagI	TCATGA	3 cut(s)	105, 318, 1231
PceI	AGGCCT	1 cut(s)	1347
PcsI	WCGNNNNNNNCGW	3 cut(s)	820, 1419, 1874
PdmI	GAANNNNTTC	1 cut(s)	395
PfeI	GAWTC	2 cut(s)	612, 625
Pfl23II	CGTACG	1 cut(s)	1872
PkrI	GCNGC	8 cut(s)	19, 237, 240, 243, 431, 1538, 1772, 1942
Ple19I	CGATCG	1 cut(s)	845
PleI	GAGTC	1 cut(s)	717
PpsI	GAGTC	1 cut(s)	717
PpuMI	RGGWCCY	1 cut(s)	579
PshAI	GACNNNNGTC	1 cut(s)	1556
Psp5II	RGGWCCY	1 cut(s)	579
Psp6I	CCWGG	2 cut(s)	581, 1294
PspFI	CCCAGC	2 cut(s)	186, 1656
PspGI	CCWGG	2 cut(s)	581, 1294
PspLI	CGTACG	1 cut(s)	1872
PspN4I	GGNNCC	3 cut(s)	442, 1020, 1565
PspPI	GGNCC	5 cut(s)	338, 529, 579, 686, 1441
PspPPI	RGGWCCY	1 cut(s)	579
PstI	CTGCAG	2 cut(s)	240, 246
PvuI	CGATCG	1 cut(s)	845
PvuII	CAGCTG	3 cut(s)	241, 1025, 1656
RsaI	GTAC	7 cut(s)	442, 765, 938, 1002, 1032, 1874, 1895
RsaNI	GTAC	7 cut(s)	441, 764, 937, 1001, 1031, 1873, 1894
RseI	CAYNNNNRTG	3 cut(s)	104, 755, 1269
Rsr2I	CGGWCCG	1 cut(s)	686
RsrII	CGGWCCG	1 cut(s)	686
SaqAI	TTAA	1 cut(s)	593
SatI	GCNGC	8 cut(s)	18, 236, 239, 242, 430, 1537, 1771, 1941
Sau3AI	GATC	7 cut(s)	25, 267, 786, 842, 1141, 1323, 1824
Sau96I	GGNCC	5 cut(s)	338, 529, 579, 686, 1441
SchI	GAGTC	1 cut(s)	717
SduI	GDGCHC	5 cut(s)	814, 823, 1021, 1285, 1302
SfaNI	GCATC	4 cut(s)	641, 1368, 1581, 1731
SfcI	CTRYAG	2 cut(s)	236, 242
SfuI	TTCGAA	1 cut(s)	1584
SinI	GGWCC	5 cut(s)	338, 529, 579, 686, 1441
SmaI	CCCGGG	2 cut(s)	890, 1374
SmiMI	CAYNNNNRTG	3 cut(s)	104, 755, 1269
SmlI	CTYRAG	1 cut(s)	1400
SmoI	CTYRAG	1 cut(s)	1400
Sse9I	AATT	6 cut(s)	109, 118, 181, 395, 565, 713
SseBI	AGGCCT	1 cut(s)	1347
SsiI	CCGC	9 cut(s)	200, 429, 665, 684, 689, 976, 1537, 1608, 1814
SspMI	CTAG	6 cut(s)	63, 165, 1260, 1349, 1445, 1902
StuI	AGGCCT	1 cut(s)	1347
StyI	CCWWGG	2 cut(s)	532, 1348
TaaI	ACNGT	2 cut(s)	291, 1850
TaiI	ACGT	3 cut(s)	593, 1416, 1560
TaqII	GACCGA	1 cut(s)	1568
TasI	AATT	6 cut(s)	109, 118, 181, 395, 565, 713
TatI	WGTACW	2 cut(s)	936, 1893
TauI	GCSGC	2 cut(s)	432, 1539
TfiI	GAWTC	2 cut(s)	612, 625
Tru1I	TTAA	1 cut(s)	593
Tru9I	TTAA	1 cut(s)	593
TscAI	CASTG	5 cut(s)	35, 348, 642, 762, 1855
TseFI	GTSAC	4 cut(s)	97, 586, 1167, 1909
TseI	GCWGC	6 cut(s)	17, 235, 238, 241, 1770, 1940
Tsp45I	GTSAC	4 cut(s)	97, 586, 1167, 1909
TspDTI	ATGAA	8 cut(s)	122, 335, 660, 881, 1127, 1220, 1223, 1727
TspGWI	ACGGA	2 cut(s)	234, 1263
TspMI	CCCGGG	2 cut(s)	888, 1372
TspRI	CASTG	5 cut(s)	35, 348, 642, 762, 1855
VpaK11BI	GGWCC	5 cut(s)	338, 529, 579, 686, 1441
XagI	CCTNNNNNAGG	1 cut(s)	1622
XapI	RAATTY	3 cut(s)	109, 118, 565
XbaI	TCTAGA	1 cut(s)	164
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1302
XmaI	CCCGGG	2 cut(s)	888, 1372
XmaJI	CCTAGG	1 cut(s)	1348
XmiI	GTMKAC	3 cut(s)	228, 378, 1153
XmnI	GAANNNNTTC	1 cut(s)	395
XspI	CTAG	6 cut(s)	63, 165, 1260, 1349, 1445, 1902
ZraI	GACGTC	1 cut(s)	1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.