Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002722

Physical Location & Seq

Genomic Coordinates Reverse (-)

13728326 .. 13731156

Gene Structure 2831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1167500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGTAATGGGCGCGCATATGGCTATGACTAGGCTTATGCGCGCACCAAACCCTACCCCAACATTTTTTCTTACCCTCTTTGTTGGTTATGTATCATGCATGGCGGTTTTACCGTTTGGTTCACCAATGGATACAACCACCGATGCCCTTTTGAAGTTCAAGAAAACGTTGCAATTGGGAAACAACACCGAGGCTCTTAGAAATTGGGATCCTAACAAAAACCCGTGTAATGGTAACAAGGCGAATTGGGTTGGCGTGCTTTGCTTTAATGGGAATGTCCGGGGATTGCAGCTCGAAAACTTGGGTTTACAGGGAAAGCTGGATTTGGAGCCTCTCGCTCAGTTGCCTTATTTGAAAACCCTAAGCTTCATGAATAACGTGTTGGATGGTCCATTGCCGGACCTTAAGAAATTTAAAAAGTTAAGGTCTTTGTATTTGTCCTACAATCATTTCTCTGGTGAGATTCCAGCCGATGAATTTGAAGGTATGCATTTGTTGAGGAAATTGTATCTTGCAAACAATGAGTTTTCCGGCAAAATCCCGTCTTCCCTTACTACTTTGCCTAGGGTTTTCGATGTGGGTCTTGAGGGGAACAAGTTTAGTGGCCAAATACCTGATTTTAAGCACAAGTCTTTGAAGAGGTTGAATGTATCTCAAAATGATTTGGAGGGTCCAGTTCCAGAAAGCCTAAAAAAGATGGATCCAAGTAACTTTGCAGGCAATGGAAAGCTATGTGGTTCGCCTCTTCAGGGAGCATGCAGCCCCCCTCCTCCTCCTCCTTCTCCACCTGCTCCTCCTCCTACAACTCCTGCCCCACCGCCTGAATGCACGGGGGATTCATGCGGTGCGTCTAAGAAGCCGTCAGGTCTAAAAGTAGCCCTAATTGTGGTGAGTCTATTACTTCTACTGGCCCTCATTGCTGCGATTTTCATGTTCCTCAACAAGAGAAAGCAACGATCAGAATTAGACGGGACTGAATCATTGGACGAGTCCTCCAATTATACGGCAGCTGCTGCAAGCAGCCAAATGGATGTTAAGTCGGTAGAAACTAACCCACATCCAAAGAGAGCTGACCAGGGAAAGTTGTCATTTGTGAGGGATGACAGACAGAGGTTTGATTTGCATGACCTTCTCAGAGCCTCGGCTGAAATCTTGGGGAGCGGGAATTTTGGGGCTTCCTACAAGGCTTTGATCATGACTGATGTTGTGGTGGTCAAGAGGTATAAGCAGATGAACAATGTGGGAAGAGAGGAGTTCCATGAGCACATGAGAAGGCTTGGAAGATTGACACACCAAAACTTGTTGCCTCTGGTGGCCTATTATTATAGAAGGGAAGAGAAGCTCTTGGTTTCTGACTTTGTGGAGAATGGTAGCTTGGCTTCTCATCTTCACGGCAATCATAATTCAGATATGCCCGTGCTTGATTGGCCAACACGTTTGAGAATAATCAAAGGCATAGCAAGGGGATTGACATACCTCTACAGCACACTCCCTAGCTTGGTTGTACCCCATGGTCATCTGAAATCCTCTAATGTGCTTTTAGACGAAAACTTTGAGCCCCTACTGAACGACTATGCTCTACTCCCCGTGATCAACATGGAGCAAGCTCAACACCTGATGATGGCATACAAGTCACCCGAATACGCCCAGCACCGACGTATAACAAAGAAGACCGACCTATGGTGCTTCGGAATAATAATCTTGGAGGTGTTAACCGGAAAGTTCCCAGAGAACTACCTCAAGGAAAGTTATGATAGTAAGGCGGATTTAGCAAATTGGGTCAATGGAATGATCAAGGAAAAGAGAACAAGTGAGGTGTTTGATGTAGAAATGGGGAGAGTGGGGAACAGTAGAGGAGAACTGTTAAAGCTCTTGAAGATTGGAGTGAGTTGTTGTGAGGAGGATATTGAGAGAAGGCTGGATTTGAATGAAGTCGTTGAGAAGATTGAAGAATTGAACGAGGGAGAAAGCGATGGAGATTACCGATCAAGTGTTTCTAGTGAAGGAGATGATTACCCTTCACAAGTGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0008150 GO:0010769 GO:0022603 GO:0022604 GO:0040008 GO:0043900 GO:0045595 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0060284 GO:0065007 GO:0080092 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

678

Amino Acids

75.46

Weight (kDa)

6.98

Isoelectric Point (pI)

44.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	47 - 88	1.8e-07	Leucine rich repeat N-terminal domain
LRR_8	PF13855	140 - 200	6.9e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	383 - 649	6.7e-28	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	383 - 647	4.6e-24	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002722)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50610 AT3G20190 AT3G20190
fragaria_vesca	FvH4_2g36521 FvH4_2g36530 FvH4_6g36540
malus_domestica	MD08G1125100.v1.1 MD08G1125200.v1.1 MD09G1167500.v1.1 MD15G1104700.v1.1 MD17G1160800.v1.1
prunus_persica	Prupe.1G456700_v2.0.a1 Prupe.1G456800_v2.0.a1 Prupe.3G025500_v2.0.a1
pyrus_communis	pycom08g10400 pycom09g08500 pycom15g09530 pycom17g15310
rosa_chinensis	RchiOBHm_Chr2g0149011 RchiOBHm_Chr6g0305321 RchiOBHm_Chr6g0305341
rosa_laevigata	RLG00000010898 RLG00000010899 RLG00000020362
rosa_multiflora	Rmu_sc0007360.1_g000007 Rmu_ssc0000148.1_g000003
rosa_roxburghii	Rroxscaffold_7G00162890 Rroxscaffold_7G00162900
rosa_rugosa	Rorug02G0408600 Rorug06G0339600 Rorug06G0339700.1
rosa_samantha	Rh2AG467900 Rh2BG480700 Rh2CG454300 Rh2DG489600 Rh6AG451200 Rh6AG451400
rosa_wichuraiana	Rw2G038120 Rw6G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	796
Acc36I	ACCTGC	1 cut(s)	796
AccBSI	CCGCTC	1 cut(s)	1161
AccII	CGCG	2 cut(s)	14, 42
AciI	CCGC	5 cut(s)	104, 818, 843, 1161, 1763
AclI	AACGTT	1 cut(s)	167
AclWI	GGATC	4 cut(s)	203, 216, 695, 708
AcoI	YGGCCR	2 cut(s)	604, 1427
AcsI	RAATTY	3 cut(s)	410, 476, 1165
AcuI	CTGAAG	1 cut(s)	731
AfaI	GTAC	1 cut(s)	1506
AfiI	CCNNNNNNNGG	6 cut(s)	230, 749, 886, 1498, 1621, 1680
AflII	CTTAAG	1 cut(s)	404
AflIII	ACRYGT	2 cut(s)	378, 1433
AjnI	CCWGG	1 cut(s)	1074
AjuI	GAANNNNNNNTTGG	4 cut(s)	365, 397, 1358, 1390
Alw21I	GWGCWC	1 cut(s)	1266
AlwI	GGATC	4 cut(s)	203, 216, 695, 708
AlwNI	CAGNNNCTG	1 cut(s)	1013
AoxI	GGCC	4 cut(s)	604, 909, 1314, 1427
ApeKI	GCWGC	7 cut(s)	289, 759, 920, 1007, 1010, 1013, 1020
ApoI	RAATTY	3 cut(s)	410, 476, 1165
ArsI	GACNNNNNNTTYG	2 cut(s)	1535, 1567
AspA2I	CCTAGG	1 cut(s)	563
AspLEI	GCGC	4 cut(s)	14, 16, 42, 44
AspS9I	GGNCC	4 cut(s)	389, 400, 671, 910
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	4 cut(s)	114, 470, 901, 1626
AvaII	GGWCC	3 cut(s)	389, 400, 671
AvrII	CCTAGG	1 cut(s)	563
BalI	TGGCCA	2 cut(s)	606, 1429
BamHI	GGATCC	2 cut(s)	208, 700
BanII	GRGCYC	1 cut(s)	1560
BarI	GAAGNNNNNNTAC	2 cut(s)	1363, 1395
BbsI	GAAGAC	2 cut(s)	537, 1676
Bbv12I	GWGCWC	1 cut(s)	1266
BbvI	GCAGC	7 cut(s)	301, 771, 907, 997, 1000, 1019, 1032
BccI	CCATC	4 cut(s)	380, 691, 1615, 1967
BceAI	ACGGC	3 cut(s)	844, 1020, 1408
BciT130I	CCWGG	1 cut(s)	1076
BciVI	GTATCC	1 cut(s)	124
BclI	TGATCA	3 cut(s)	1191, 1590, 1791
BcnI	CCSGG	1 cut(s)	281
BfaI	CTAG	4 cut(s)	30, 564, 1494, 1998
BfmI	CTRYAG	1 cut(s)	1480
BfrI	CTTAAG	1 cut(s)	404
BfuAI	ACCTGC	1 cut(s)	796
BfuI	GTATCC	1 cut(s)	124
BisI	GCNGC	7 cut(s)	290, 760, 921, 1008, 1011, 1014, 1021
BlnI	CCTAGG	1 cut(s)	563
BlsI	GCNGC	7 cut(s)	291, 761, 922, 1009, 1012, 1015, 1022
Bme1390I	CCNGG	2 cut(s)	281, 1076
Bme18I	GGWCC	3 cut(s)	389, 400, 671
BmgT120I	GGNCC	4 cut(s)	389, 400, 671, 910
BmiI	GGNNCC	4 cut(s)	210, 330, 672, 702
BmrFI	CCNGG	2 cut(s)	281, 1076
BmsI	GCATC	1 cut(s)	133
BpiI	GAAGAC	2 cut(s)	537, 1676
Bpu10I	CCTNAGC	1 cut(s)	362
BpuEI	CTTGAG	2 cut(s)	605, 1724
BpuMI	CCSGG	1 cut(s)	281
BsaJI	CCNNGG	6 cut(s)	189, 280, 563, 1075, 1140, 1510
BsaWI	WCCGGW	1 cut(s)	1715
BsaXI	ACNNNNNCTCC	2 cut(s)	977, 1007
Bsc4I	CCNNNNNNNGG	6 cut(s)	230, 749, 886, 1498, 1621, 1680
Bse1I	ACTGG	2 cut(s)	674, 912
Bse3DI	GCAATG	3 cut(s)	392, 727, 915
BseBI	CCWGG	1 cut(s)	1076
BseDI	CCNNGG	6 cut(s)	189, 280, 563, 1075, 1140, 1510
BseGI	GGATG	4 cut(s)	391, 1036, 1057, 1105
BseLI	CCNNNNNNNGG	6 cut(s)	230, 749, 886, 1498, 1621, 1680
BseMI	GCAATG	3 cut(s)	392, 727, 915
BseMII	CTCAG	2 cut(s)	353, 1147
BseNI	ACTGG	2 cut(s)	674, 912
BsePI	GCGCGC	2 cut(s)	12, 40
BseRI	GAGGAG	8 cut(s)	759, 762, 765, 783, 786, 1265, 1869, 1913
BseXI	GCAGC	7 cut(s)	301, 771, 907, 997, 1000, 1019, 1032
BseYI	CCCAGC	1 cut(s)	1647
Bsh1236I	CGCG	2 cut(s)	14, 42
BshFI	GGCC	4 cut(s)	606, 911, 1316, 1429
BsiHKAI	GWGCWC	1 cut(s)	1266
BsiSI	CCGG	4 cut(s)	280, 398, 531, 1716
BslFI	GGGAC	1 cut(s)	985
BslI	CCNNNNNNNGG	6 cut(s)	230, 749, 886, 1498, 1621, 1680
BsmFI	GGGAC	1 cut(s)	985
BsmI	GAATGC	1 cut(s)	830
BsnI	GGCC	4 cut(s)	606, 911, 1316, 1429
Bsp1286I	GDGCHC	2 cut(s)	1266, 1560
Bsp143I	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
Bsp19I	CCATGG	1 cut(s)	1510
BspACI	CCGC	5 cut(s)	104, 818, 843, 1161, 1763
BspANI	GGCC	4 cut(s)	606, 911, 1316, 1429
BspCNI	CTCAG	2 cut(s)	352, 1146
BspFNI	CGCG	2 cut(s)	14, 42
BspHI	TCATGA	2 cut(s)	369, 1194
BspLI	GGNNCC	4 cut(s)	210, 330, 672, 702
BspMI	ACCTGC	1 cut(s)	796
BspPI	GGATC	4 cut(s)	203, 216, 695, 708
BspTI	CTTAAG	1 cut(s)	404
BsrBI	CCGCTC	1 cut(s)	1161
BsrDI	GCAATG	3 cut(s)	392, 727, 915
BsrI	ACTGG	2 cut(s)	674, 912
BssECI	CCNNGG	6 cut(s)	189, 280, 563, 1075, 1140, 1510
BssHII	GCGCGC	2 cut(s)	12, 40
BssMI	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
BssT1I	CCWWGG	2 cut(s)	563, 1510
Bst2UI	CCWGG	1 cut(s)	1076
Bst4CI	ACNGT	3 cut(s)	114, 1850, 1863
Bst6I	CTCTTC	4 cut(s)	632, 750, 1240, 1329
BstAFI	CTTAAG	1 cut(s)	404
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstC8I	GCNNGC	7 cut(s)	14, 42, 257, 718, 757, 1018, 1605
BstDEI	CTNAG	5 cut(s)	197, 339, 362, 852, 1133
BstDSI	CCRYGG	1 cut(s)	1510
BstF5I	GGATG	4 cut(s)	391, 1036, 1057, 1105
BstFNI	CGCG	2 cut(s)	14, 42
BstHHI	GCGC	4 cut(s)	14, 16, 42, 44
BstKTI	GATC	7 cut(s)	211, 703, 959, 1194, 1593, 1794, 1988
BstMBI	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 261, 917, 1013, 1426, 1769
BstNI	CCWGG	1 cut(s)	1076
BstNSI	RCATGY	1 cut(s)	759
BstSCI	CCNGG	2 cut(s)	279, 1074
BstSFI	CTRYAG	1 cut(s)	1480
BstUI	CGCG	2 cut(s)	14, 42
BstV1I	GCAGC	7 cut(s)	301, 771, 907, 997, 1000, 1019, 1032
BstV2I	GAAGAC	2 cut(s)	537, 1676
BstX2I	RGATCY	2 cut(s)	208, 700
BstYI	RGATCY	2 cut(s)	208, 700
BsuI	GTATCC	1 cut(s)	124
BsuRI	GGCC	4 cut(s)	606, 911, 1316, 1429
BtgI	CCRYGG	1 cut(s)	1510
BtgZI	GCGATG	1 cut(s)	1986
BtsCI	GGATG	4 cut(s)	391, 1036, 1057, 1105
BveI	ACCTGC	1 cut(s)	796
Cac8I	GCNNGC	7 cut(s)	14, 42, 257, 718, 757, 1018, 1605
CaiI	CAGNNNCTG	1 cut(s)	1013
CciI	TCATGA	2 cut(s)	369, 1194
CfoI	GCGC	4 cut(s)	14, 16, 42, 44
Cfr13I	GGNCC	4 cut(s)	389, 400, 671, 910
CseI	GACGC	1 cut(s)	837
Csp6I	GTAC	1 cut(s)	1505
CspCI	CAANNNNNGTGG	2 cut(s)	583, 618
CviQI	GTAC	1 cut(s)	1505
DdeI	CTNAG	5 cut(s)	197, 339, 362, 852, 1133
DpnI	GATC	7 cut(s)	210, 702, 958, 1193, 1592, 1793, 1987
DpnII	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
DraI	TTTAAA	1 cut(s)	415
EaeI	YGGCCR	2 cut(s)	604, 1427
Eam1104I	CTCTTC	4 cut(s)	632, 750, 1240, 1329
EarI	CTCTTC	4 cut(s)	632, 750, 1240, 1329
EciI	GGCGGA	1 cut(s)	1778
Eco130I	CCWWGG	2 cut(s)	563, 1510
Eco24I	GRGCYC	1 cut(s)	1560
Eco47I	GGWCC	3 cut(s)	389, 400, 671
Eco57I	CTGAAG	1 cut(s)	731
EcoRII	CCWGG	1 cut(s)	1074
EcoT14I	CCWWGG	2 cut(s)	563, 1510
EcoT22I	ATGCAT	2 cut(s)	101, 492
EcoT38I	GRGCYC	1 cut(s)	1560
ErhI	CCWWGG	2 cut(s)	563, 1510
FaqI	GGGAC	1 cut(s)	985
FauI	CCCGC	1 cut(s)	1154
FauNDI	CATATG	1 cut(s)	18
FbaI	TGATCA	3 cut(s)	1191, 1590, 1791
Fnu4HI	GCNGC	7 cut(s)	290, 760, 921, 1008, 1011, 1014, 1021
FokI	GGATG	4 cut(s)	398, 1043, 1044, 1112
FriOI	GRGCYC	1 cut(s)	1560
Fsp4HI	GCNGC	7 cut(s)	290, 760, 921, 1008, 1011, 1014, 1021
FspBI	CTAG	4 cut(s)	30, 564, 1494, 1998
GlaI	GCGC	4 cut(s)	13, 15, 41, 43
GluI	GCNGC	7 cut(s)	290, 760, 921, 1008, 1011, 1014, 1021
GsaI	CCCAGC	1 cut(s)	1651
HaeIII	GGCC	4 cut(s)	606, 911, 1316, 1429
HapII	CCGG	4 cut(s)	280, 398, 531, 1716
HgaI	GACGC	1 cut(s)	837
HhaI	GCGC	4 cut(s)	14, 16, 42, 44
Hin6I	GCGC	4 cut(s)	12, 14, 40, 42
HinP1I	GCGC	4 cut(s)	12, 14, 40, 42
HincII	GTYRAC	1 cut(s)	1713
HindII	GTYRAC	1 cut(s)	1713
HindIII	AAGCTT	1 cut(s)	364
HinfI	GANTC	5 cut(s)	463, 836, 892, 977, 989
HpaI	GTTAAC	1 cut(s)	1713
HpaII	CCGG	4 cut(s)	280, 398, 531, 1716
HphI	GGTGA	4 cut(s)	114, 470, 901, 1626
Hpy166II	GTNNAC	3 cut(s)	122, 308, 1713
Hpy188I	TCNGA	6 cut(s)	961, 1136, 1354, 1408, 1521, 1691
Hpy188III	TCNNGA	7 cut(s)	160, 370, 584, 680, 1195, 1216, 1873
Hpy8I	GTNNAC	3 cut(s)	122, 308, 1713
Hpy99I	CGWCG	1 cut(s)	1659
HpyAV	CCTTC	8 cut(s)	476, 789, 1139, 1266, 1323, 1908, 1997, 2028
HpyCH4III	ACNGT	3 cut(s)	114, 1850, 1863
HpyCH4IV	ACGT	4 cut(s)	167, 378, 1435, 1657
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 261, 917, 1013, 1426, 1769
HpyF3I	CTNAG	5 cut(s)	197, 339, 362, 852, 1133
HpySE526I	ACGT	4 cut(s)	167, 378, 1435, 1657
HspAI	GCGC	4 cut(s)	12, 14, 40, 42
Ksp22I	TGATCA	3 cut(s)	1191, 1590, 1791
KspAI	GTTAAC	1 cut(s)	1713
Kzo9I	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
LmnI	GCTCC	5 cut(s)	328, 752, 796, 1158, 1600
Lsp1109I	GCAGC	7 cut(s)	301, 771, 907, 997, 1000, 1019, 1032
LweI	GCATC	1 cut(s)	133
MaeI	CTAG	4 cut(s)	30, 564, 1494, 1998
MaeII	ACGT	4 cut(s)	167, 378, 1435, 1657
MaeIII	GTNAC	3 cut(s)	233, 707, 1632
MalI	GATC	7 cut(s)	210, 702, 958, 1193, 1592, 1793, 1987
MbiI	CCGCTC	1 cut(s)	1161
MboI	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
MfeI	CAATTG	1 cut(s)	173
MflI	RGATCY	2 cut(s)	208, 700
MhlI	GDGCHC	2 cut(s)	1266, 1560
MlsI	TGGCCA	2 cut(s)	606, 1429
MluNI	TGGCCA	2 cut(s)	606, 1429
MlyI	GAGTC	2 cut(s)	901, 998
MmeI	TCCRAC	1 cut(s)	363
Mox20I	TGGCCA	2 cut(s)	606, 1429
Mph1103I	ATGCAT	2 cut(s)	101, 492
MscI	TGGCCA	2 cut(s)	606, 1429
MseI	TTAA	8 cut(s)	267, 405, 414, 422, 621, 1035, 1712, 1865
Msp20I	TGGCCA	2 cut(s)	606, 1429
MspA1I	CMGCKG	1 cut(s)	1010
MspCI	CTTAAG	1 cut(s)	404
MspI	CCGG	4 cut(s)	280, 398, 531, 1716
MspR9I	CCNGG	2 cut(s)	281, 1076
MunI	CAATTG	1 cut(s)	173
Mva1269I	GAATGC	1 cut(s)	830
MvaI	CCWGG	1 cut(s)	1076
MvnI	CGCG	2 cut(s)	14, 42
MwoI	GCNNNNNNNGC	6 cut(s)	20, 261, 917, 1013, 1426, 1769
NciI	CCSGG	1 cut(s)	281
NcoI	CCATGG	1 cut(s)	1510
NdeI	CATATG	1 cut(s)	18
NdeII	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
NlaIV	GGNNCC	4 cut(s)	210, 330, 672, 702
NmeAIII	GCCGAG	1 cut(s)	1121
NmuCI	GTSAC	1 cut(s)	1632
NsiI	ATGCAT	2 cut(s)	101, 492
NspI	RCATGY	1 cut(s)	759
PaeI	GCATGC	1 cut(s)	759
PagI	TCATGA	2 cut(s)	369, 1194
PaqCI	CACCTGC	1 cut(s)	796
PauI	GCGCGC	2 cut(s)	12, 40
PctI	GAATGC	1 cut(s)	830
PfeI	GAWTC	3 cut(s)	463, 836, 977
PkrI	GCNGC	7 cut(s)	291, 761, 922, 1009, 1012, 1015, 1022
PleI	GAGTC	2 cut(s)	900, 997
PpsI	GAGTC	2 cut(s)	900, 997
Psp1406I	AACGTT	1 cut(s)	167
Psp6I	CCWGG	1 cut(s)	1074
PspFI	CCCAGC	1 cut(s)	1647
PspGI	CCWGG	1 cut(s)	1074
PspN4I	GGNNCC	4 cut(s)	210, 330, 672, 702
PspPI	GGNCC	4 cut(s)	389, 400, 671, 910
PstNI	CAGNNNCTG	1 cut(s)	1013
PsuI	RGATCY	2 cut(s)	208, 700
PteI	GCGCGC	2 cut(s)	12, 40
PvuII	CAGCTG	1 cut(s)	1010
RsaI	GTAC	1 cut(s)	1506
RsaNI	GTAC	1 cut(s)	1505
SaqAI	TTAA	8 cut(s)	267, 405, 414, 422, 621, 1035, 1712, 1865
SatI	GCNGC	7 cut(s)	290, 760, 921, 1008, 1011, 1014, 1021
Sau3AI	GATC	7 cut(s)	208, 700, 956, 1191, 1590, 1791, 1985
Sau96I	GGNCC	4 cut(s)	389, 400, 671, 910
SchI	GAGTC	2 cut(s)	901, 998
ScrFI	CCNGG	2 cut(s)	281, 1076
SduI	GDGCHC	2 cut(s)	1266, 1560
SfaNI	GCATC	1 cut(s)	133
SfcI	CTRYAG	1 cut(s)	1480
SinI	GGWCC	3 cut(s)	389, 400, 671
SmlI	CTYRAG	3 cut(s)	404, 584, 1739
SmoI	CTYRAG	3 cut(s)	404, 584, 1739
SphI	GCATGC	1 cut(s)	759
SsiI	CCGC	5 cut(s)	104, 818, 843, 1161, 1763
SspMI	CTAG	4 cut(s)	30, 564, 1494, 1998
StyD4I	CCNGG	2 cut(s)	279, 1074
StyI	CCWWGG	2 cut(s)	563, 1510
TaaI	ACNGT	3 cut(s)	114, 1850, 1863
TaiI	ACGT	4 cut(s)	170, 381, 1438, 1660
TaqI	TCGA	2 cut(s)	294, 573
TaqII	GACCGA	1 cut(s)	1688
TfiI	GAWTC	3 cut(s)	463, 836, 977
Tru1I	TTAA	8 cut(s)	267, 405, 414, 422, 621, 1035, 1712, 1865
Tru9I	TTAA	8 cut(s)	267, 405, 414, 422, 621, 1035, 1712, 1865
TseFI	GTSAC	1 cut(s)	1632
TseI	GCWGC	7 cut(s)	289, 759, 920, 1007, 1010, 1013, 1020
Tsp45I	GTSAC	1 cut(s)	1632
TspDTI	ATGAA	7 cut(s)	358, 386, 489, 828, 919, 1247, 1944
Vha464I	CTTAAG	1 cut(s)	404
VpaK11BI	GGWCC	3 cut(s)	389, 400, 671
XapI	RAATTY	3 cut(s)	410, 476, 1165
XceI	RCATGY	1 cut(s)	759
XmaJI	CCTAGG	1 cut(s)	563
XspI	CTAG	4 cut(s)	30, 564, 1494, 1998
Zsp2I	ATGCAT	2 cut(s)	101, 492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.