Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

29260228 .. 29266566

Gene Structure 6339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g41351.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGGAGAGGCAGTGGATTGTGAAGCGAGTAGTTCAGTGACGATCGGTTCGTCGCTGATACCGATAATAAACAAGCTGCAGGACATTCTGGCTCCGGTAGCCGTAGGCAGCGAGATATCGCTGCCGCAAGTGGCGGTTGTGGGAAGCCAGAGCAGCGGCAAATCCAGCGTCCTCGAGGCCCTCGTCGGCCGTGACTTTCTCCCTCGCGGCTGCGATATCTGCACTCGTAGACCCCTCGTCTTGATGCTCGAGAACCGCCCCGCCGGAGATTCCGACTGGGCCGAGTTCCGTCATTTGCCTGGAAAGCGCTTCTACGACTTCACCATGATCCGCCGAGAGATTCAGGCTGAGACTGATAGAGAGGCAGGATTGAACAAAGGGGTTTCGGATAAACAAATTCGGCTCAAGATTTCCTCTCCCAATGTCCTTAATATGACTCTTGTTGATTTGCCTGGCATCACTAAGGTTCCCGTGGGAGATCAACCTAGTGATATAGAATCAAGGATCAGGAAGATGATAATGTCCCATATTCGCCAACCAAATTGCATCATATTGGCTGTTACTCCTGCCAACGCTGATTTAGCCACCTCTGATGCACTTCAACTGGCTCGAGAAGCTGACCCTACTGGTTTTCGTACCATTGGTGTCATCACCAAACTTGATATAATGGACAGGGGCACCGATGCCAGCAACTTTCTACTTGGGAAAGTTGTTCCCCTTAAGCTTGGCTACGTTGGTGTTGTCAACCGTTGTCAAGAGGACATAAATAAAAACCGTAGCATTGCTGCAGCACTTGCTTATGAGGAGAAATTATTTCGTGATAATCCAGTATATAGCAGTCTCTCTGATCGTTGTGGCATTCCCAAGTTAGCAAGGAAACTGAATCAGATTCTGGAGCACCATATCAGGATTGTTCTCCCTGGTTTGAAGGCTGAGTTGAATTCTCAGATGAATGCTGTTTATAAGGAACTACAAACCTATGGAAAAGTTATGGAATCTAAAACAGATCTGGGAGCAACTATGTTAAGTATTTTGTCAAAATACTGTGAAGGTGAGACTTCAGTTTCATGGCAGAGTTGTATGTTGGATGGAAAAAATCCGGACATGTCAACTAAAGAATTGACAGGAGGAGCCAGGATCCAGTACATTTTCCAGTCAATTTTTGTAAAGAGCTTGCAGGAAGTAGATCCCTGTGACGATGTAACTGATGATGATATTCAAACGGCCATTCAAAATGCATCTGGTGCAAGAAATGCTTTATTTGTGCCCGAGGTCCCATTTGAAGTTTTAGTTAGAAGACAGATTGCACGCTTGTTGGACCCAAGCCTTCAGTGCCTACGTTTTGTTTATGAGGAACTGGTTAAGATTAGTCGCACTTGTGAGGTAACTGAGTTGCAAAGGTTTCCAGTATTAAGAACGCGTTTGGATGAAGTCATGGTAAACTTTTTGCGTGGAGGTGCAGAGCCTGCTGAGAGAATGATAGAGAATCTTATTGAGATGGAGGTAGATTATATAAACACCTCACACCCAAATTTTTTAGGTGGGAACAGAGCTGCTGAGCTTGCTATGCATCAGTTGAAATCACCACAGATATCTCTGGGCATAACGGATTCTGAAGCCCAAACTTCTCGAGTGGTTCGGGCAAAGAATGTACAAATACCAAATAAGGGAAGTCGTGCACAGCTGGATAACGATCAACCTATATCTGGAAGTTCCACAAGGACTTGGGCGCTTCCATTATTATTTGGGAATTGGAGATCGTCTGGAGACTCCCTGGATAGCAGATCTATTGGTGAACAAAATCATTCACAATCGATGCCCTCTGTAATCCAATTGAGAGAGCCCCCGTCCGTCTTAAGGCCAGTTGAAGTGACAGAGCATAAAGCAGTGGAAATTATTGTAACCAAATTACTCTTGAGGTCATATTATGATATAGTCCGAAAAAACATTCAAGATCTTGTTCCAAAAGCAATTATGCACTTTCTGGTCAATCTTACAAAACGGACCCTTCATCGAACCTTCATTCAAAATTTGTACAGAGAAAACCTATTTGAAGAACTGTTGCAGGAGCAGGATGCACTTGTTTTGAAAAGAAAGCGTAACCAAGAATTGCTCCGAGTTTTGGAACAATCTGTGCAGACACTGGAGAAAGTTGAATCTGATGTCTCTTCCCGTACGTCAAGTTTGATATTTGAAGCTTCCACTGAACTTCCAAGAATTACAAGAACTTCACCACCCAATGGTGAGATAAGTCAATTTAGATACCGTTCGCACTCCAGATCATTTGTTACCAACTCTACAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

769

Amino Acids

85.81

Weight (kDa)

6.86

Isoelectric Point (pI)

52.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	44 - 220	1.1e-53	Dynamin family
Dynamin_M	PF01031	228 - 519	6.6e-98	Dynamin central region
GED	PF02212	629 - 718	6.9e-23	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	963
AbsI	CCTCGAGG	1 cut(s)	173
AccB1I	GGYRCC	1 cut(s)	677
AccB7I	CCANNNNNTGG	1 cut(s)	2240
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	2 cut(s)	207, 1420
AccIII	TCCGGA	1 cut(s)	1099
AciI	CCGC	7 cut(s)	125, 134, 156, 207, 256, 261, 331
AclWI	GGATC	5 cut(s)	322, 512, 1132, 1145, 1181
AcoI	YGGCCR	2 cut(s)	187, 1224
AcsI	RAATTY	4 cut(s)	396, 940, 1531, 2029
AcuI	CTGAAG	3 cut(s)	1044, 1313, 1635
AfaI	GTAC	5 cut(s)	637, 1145, 1653, 2036, 2176
AfeI	AGCGCT	1 cut(s)	308
AfiI	CCNNNNNNNGG	5 cut(s)	1667, 1706, 1857, 2122, 2240
AflII	CTTAAG	2 cut(s)	719, 1855
AflIII	ACRYGT	2 cut(s)	1104, 1418
AhdI	GACNNNNNGTC	1 cut(s)	236
AjnI	CCWGG	5 cut(s)	298, 451, 919, 1133, 1773
AluBI	AGCT	9 cut(s)	76, 617, 724, 1173, 1553, 1561, 1684, 2198, 2303
AluI	AGCT	9 cut(s)	76, 617, 724, 1173, 1553, 1561, 1684, 2198, 2303
Alw21I	GWGCWC	2 cut(s)	900, 1681
Alw26I	GTCTC	5 cut(s)	344, 845, 1049, 1761, 2170
Alw44I	GTGCAC	1 cut(s)	1677
AlwI	GGATC	5 cut(s)	322, 512, 1132, 1145, 1181
AlwNI	CAGNNNCTG	3 cut(s)	892, 1466, 2143
Ama87I	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
Aor13HI	TCCGGA	1 cut(s)	1099
Aor51HI	AGCGCT	1 cut(s)	308
AoxI	GGCC	5 cut(s)	177, 187, 279, 1224, 1859
ApaLI	GTGCAC	1 cut(s)	1677
ApeKI	GCWGC	8 cut(s)	76, 108, 121, 153, 210, 785, 788, 1553
ApoI	RAATTY	4 cut(s)	396, 940, 1531, 2029
ArsI	GACNNNNNNTTYG	4 cut(s)	31, 63, 153, 185
AspLEI	GCGC	2 cut(s)	309, 1732
AspS9I	GGNCC	5 cut(s)	178, 279, 1273, 1318, 2004
AsuHPI	GGTGA	7 cut(s)	313, 643, 1064, 1575, 1805, 2223, 2255
AvaI	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
AvaII	GGWCC	3 cut(s)	1273, 1318, 2004
BaeGI	GKGCMC	3 cut(s)	680, 1269, 1681
BamHI	GGATCC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	677
BanII	GRGCYC	1 cut(s)	1845
BbsI	GAAGAC	1 cut(s)	1303
Bbv12I	GWGCWC	2 cut(s)	900, 1681
BbvI	GCAGC	8 cut(s)	63, 108, 120, 165, 197, 772, 800, 1540
BccI	CCATC	2 cut(s)	1082, 1492
BceAI	ACGGC	3 cut(s)	86, 174, 1239
BciT130I	CCWGG	5 cut(s)	300, 453, 921, 1135, 1775
BcoDI	GTCTC	5 cut(s)	344, 845, 1049, 1761, 2170
BfaI	CTAG	1 cut(s)	486
BfmI	CTRYAG	3 cut(s)	77, 786, 2298
BfoI	RGCGCY	2 cut(s)	310, 1733
BfrI	CTTAAG	2 cut(s)	719, 1855
BglII	AGATCT	3 cut(s)	1006, 1784, 1954
BlpI	GCTNAGC	1 cut(s)	1557
Bme1390I	CCNGG	5 cut(s)	300, 453, 921, 1135, 1775
Bme18I	GGWCC	3 cut(s)	1273, 1318, 2004
BmeRI	GACNNNNNGTC	1 cut(s)	236
BmeT110I	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
BmgT120I	GGNCC	5 cut(s)	178, 279, 1273, 1318, 2004
BmiI	GGNNCC	8 cut(s)	93, 468, 679, 1132, 1139, 1275, 1320, 2006
BmrFI	CCNGG	5 cut(s)	300, 453, 921, 1135, 1775
BmrI	ACTGGG	1 cut(s)	286
BmsI	GCATC	9 cut(s)	234, 465, 555, 583, 673, 1247, 1579, 1806, 2065
BmuI	ACTGGG	1 cut(s)	286
BpiI	GAAGAC	1 cut(s)	1303
BpmI	CTGGAG	4 cut(s)	914, 1785, 2165, 2260
Bpu1102I	GCTNAGC	1 cut(s)	1557
BpuEI	CTTGAG	2 cut(s)	389, 1936
Bsa29I	ATCGAT	1 cut(s)	1814
BsaBI	GATNNNNATC	1 cut(s)	1692
BsaJI	CCNNGG	4 cut(s)	471, 919, 1269, 1773
BsaWI	WCCGGW	2 cut(s)	94, 1099
BsaXI	ACNNNNNCTCC	1 cut(s)	27
Bsc4I	CCNNNNNNNGG	5 cut(s)	1667, 1706, 1857, 2122, 2240
Bse3DI	GCAATG	1 cut(s)	780
Bse8I	GATNNNNATC	1 cut(s)	1692
BseAI	TCCGGA	1 cut(s)	1099
BseBI	CCWGG	5 cut(s)	300, 453, 921, 1135, 1775
BseCI	ATCGAT	1 cut(s)	1814
BseDI	CCNNGG	4 cut(s)	471, 919, 1269, 1773
BseGI	GGATG	3 cut(s)	1093, 1432, 2080
BseJI	GATNNNNATC	1 cut(s)	1692
BseLI	CCNNNNNNNGG	5 cut(s)	1667, 1706, 1857, 2122, 2240
BseMI	GCAATG	1 cut(s)	780
BseMII	CTCAG	6 cut(s)	339, 924, 959, 1380, 1461, 1548
BseRI	GAGGAG	2 cut(s)	818, 1143
BseSI	GKGCMC	3 cut(s)	680, 1269, 1681
BseX3I	CGGCCG	1 cut(s)	187
BseXI	GCAGC	8 cut(s)	63, 108, 120, 165, 197, 772, 800, 1540
BsgI	GTGCAG	3 cut(s)	205, 1479, 2156
Bsh1236I	CGCG	2 cut(s)	207, 1420
Bsh1285I	CGRYCG	2 cut(s)	45, 190
BshFI	GGCC	5 cut(s)	179, 189, 281, 1226, 1861
BshNI	GGYRCC	1 cut(s)	677
BshVI	ATCGAT	1 cut(s)	1814
BsiEI	CGRYCG	2 cut(s)	45, 190
BsiHKAI	GWGCWC	2 cut(s)	900, 1681
BsiHKCI	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
BsiSI	CCGG	3 cut(s)	95, 264, 1100
BsiWI	CGTACG	1 cut(s)	2174
BslFI	GGGAC	2 cut(s)	508, 1259
BslI	CCNNNNNNNGG	5 cut(s)	1667, 1706, 1857, 2122, 2240
BsmAI	GTCTC	5 cut(s)	344, 845, 1049, 1761, 2170
BsmFI	GGGAC	2 cut(s)	508, 1259
BsmI	GAATGC	2 cut(s)	858, 958
BsnI	GGCC	5 cut(s)	179, 189, 281, 1226, 1861
BsoBI	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
Bsp1286I	GDGCHC	5 cut(s)	680, 900, 1269, 1681, 1845
Bsp13I	TCCGGA	1 cut(s)	1099
Bsp1407I	TGTACA	2 cut(s)	1651, 2034
Bsp1720I	GCTNAGC	1 cut(s)	1557
BspACI	CCGC	7 cut(s)	125, 134, 156, 207, 256, 261, 331
BspANI	GGCC	5 cut(s)	179, 189, 281, 1226, 1861
BspCNI	CTCAG	6 cut(s)	340, 925, 958, 1381, 1462, 1549
BspDI	ATCGAT	1 cut(s)	1814
BspEI	TCCGGA	1 cut(s)	1099
BspFNI	CGCG	2 cut(s)	207, 1420
BspLI	GGNNCC	8 cut(s)	93, 468, 679, 1132, 1139, 1275, 1320, 2006
BspMAI	CTGCAG	2 cut(s)	81, 790
BspPI	GGATC	5 cut(s)	322, 512, 1132, 1145, 1181
BspT107I	GGYRCC	1 cut(s)	677
BspTI	CTTAAG	2 cut(s)	719, 1855
BsrDI	GCAATG	1 cut(s)	780
BsrGI	TGTACA	2 cut(s)	1651, 2034
BssECI	CCNNGG	4 cut(s)	471, 919, 1269, 1773
Bst2UI	CCWGG	5 cut(s)	300, 453, 921, 1135, 1775
Bst4CI	ACNGT	5 cut(s)	749, 776, 1046, 2061, 2267
Bst6I	CTCTTC	1 cut(s)	2173
BstAFI	CTTAAG	2 cut(s)	719, 1855
BstAPI	GCANNNNNTGC	4 cut(s)	794, 1244, 1253, 1466
BstAUI	TGTACA	2 cut(s)	1651, 2034
BstC8I	GCNNGC	5 cut(s)	688, 1175, 1309, 1467, 1563
BstDEI	CTNAG	7 cut(s)	348, 462, 933, 945, 1389, 1470, 1557
BstDSI	CCRYGG	1 cut(s)	471
BstF5I	GGATG	3 cut(s)	1093, 1432, 2080
BstFNI	CGCG	2 cut(s)	207, 1420
BstH2I	RGCGCY	2 cut(s)	310, 1733
BstHHI	GCGC	2 cut(s)	309, 1732
BstMAI	GTCTC	5 cut(s)	344, 845, 1049, 1761, 2170
BstMCI	CGRYCG	2 cut(s)	45, 190
BstNI	CCWGG	5 cut(s)	300, 453, 921, 1135, 1775
BstNSI	RCATGY	1 cut(s)	1108
BstSCI	CCNGG	5 cut(s)	298, 451, 919, 1133, 1773
BstSFI	CTRYAG	3 cut(s)	77, 786, 2298
BstSLI	GKGCMC	3 cut(s)	680, 1269, 1681
BstUI	CGCG	2 cut(s)	207, 1420
BstV1I	GCAGC	8 cut(s)	63, 108, 120, 165, 197, 772, 800, 1540
BstV2I	GAAGAC	1 cut(s)	1303
BstX2I	RGATCY	5 cut(s)	1006, 1137, 1186, 1784, 1954
BstYI	RGATCY	5 cut(s)	1006, 1137, 1186, 1784, 1954
BstZI	CGGCCG	1 cut(s)	187
Bsu15I	ATCGAT	1 cut(s)	1814
BsuRI	GGCC	5 cut(s)	179, 189, 281, 1226, 1861
BsuTUI	ATCGAT	1 cut(s)	1814
BtgI	CCRYGG	1 cut(s)	471
BtsCI	GGATG	3 cut(s)	1093, 1432, 2080
BtsI	GCAGTG	2 cut(s)	18, 1893
BtsIMutI	CAGTG	6 cut(s)	18, 42, 1337, 1893, 2141, 2202
Cac8I	GCNNGC	5 cut(s)	688, 1175, 1309, 1467, 1563
CaiI	CAGNNNCTG	3 cut(s)	892, 1466, 2143
CfoI	GCGC	2 cut(s)	309, 1732
Cfr13I	GGNCC	5 cut(s)	178, 279, 1273, 1318, 2004
ClaI	ATCGAT	1 cut(s)	1814
CseI	GACGC	1 cut(s)	157
Csp6I	GTAC	5 cut(s)	636, 1144, 1652, 2035, 2175
CviAII	CATG	4 cut(s)	325, 1068, 1105, 1435
CviQI	GTAC	5 cut(s)	636, 1144, 1652, 2035, 2175
DdeI	CTNAG	7 cut(s)	348, 462, 933, 945, 1389, 1470, 1557
DpnII	GATC	8 cut(s)	42, 327, 478, 504, 847, 1006, 1137, 1186
DriI	GACNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	2 cut(s)	187, 1224
EagI	CGGCCG	1 cut(s)	187
Eam1104I	CTCTTC	1 cut(s)	2173
Eam1105I	GACNNNNNGTC	1 cut(s)	236
EarI	CTCTTC	1 cut(s)	2173
EciI	GGCGGA	2 cut(s)	320, 1292
EclXI	CGGCCG	1 cut(s)	187
Eco24I	GRGCYC	1 cut(s)	1845
Eco32I	GATATC	3 cut(s)	117, 217, 1593
Eco47I	GGWCC	3 cut(s)	1273, 1318, 2004
Eco47III	AGCGCT	1 cut(s)	308
Eco52I	CGGCCG	1 cut(s)	187
Eco57I	CTGAAG	3 cut(s)	1044, 1313, 1635
Eco88I	CYCGRG	5 cut(s)	173, 248, 609, 1268, 1629
EcoO109I	RGGNCCY	2 cut(s)	178, 1273
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	5 cut(s)	298, 451, 919, 1133, 1773
EcoRV	GATATC	3 cut(s)	117, 217, 1593
EcoT22I	ATGCAT	2 cut(s)	1240, 1572
EcoT38I	GRGCYC	1 cut(s)	1845
FaeI	CATG	4 cut(s)	328, 1071, 1108, 1438
FalI	AAGNNNNNCTT	2 cut(s)	1240, 1272
FaqI	GGGAC	2 cut(s)	508, 1259
FatI	CATG	4 cut(s)	324, 1067, 1104, 1434
FauI	CCCGC	1 cut(s)	268
FblI	GTMKAC	1 cut(s)	229
FokI	GGATG	3 cut(s)	1100, 1439, 2087
FriOI	GRGCYC	1 cut(s)	1845
FspBI	CTAG	1 cut(s)	486
GlaI	GCGC	2 cut(s)	308, 1731
GsuI	CTGGAG	4 cut(s)	914, 1785, 2165, 2260
HaeII	RGCGCY	2 cut(s)	310, 1733
HaeIII	GGCC	5 cut(s)	179, 189, 281, 1226, 1861
HapII	CCGG	3 cut(s)	95, 264, 1100
HgaI	GACGC	1 cut(s)	157
HhaI	GCGC	2 cut(s)	309, 1732
Hin1II	CATG	4 cut(s)	328, 1071, 1108, 1438
Hin6I	GCGC	2 cut(s)	307, 1730
HinP1I	GCGC	2 cut(s)	307, 1730
HincII	GTYRAC	2 cut(s)	745, 1110
HindII	GTYRAC	2 cut(s)	745, 1110
HindIII	AAGCTT	2 cut(s)	722, 2196
HpaII	CCGG	3 cut(s)	95, 264, 1100
HphI	GGTGA	7 cut(s)	313, 643, 1064, 1575, 1805, 2223, 2255
Hpy166II	GTNNAC	6 cut(s)	230, 745, 1110, 1441, 1679, 1796
Hpy8I	GTNNAC	6 cut(s)	230, 745, 1110, 1441, 1679, 1796
Hpy99I	CGWCG	2 cut(s)	55, 188
HpyAV	CCTTC	5 cut(s)	922, 1043, 1337, 2018, 2029
HpyCH4III	ACNGT	5 cut(s)	749, 776, 1046, 2061, 2267
HpyCH4IV	ACGT	3 cut(s)	732, 1339, 2177
HpyF3I	CTNAG	7 cut(s)	348, 462, 933, 945, 1389, 1470, 1557
HpySE526I	ACGT	3 cut(s)	732, 1339, 2177
Hsp92II	CATG	4 cut(s)	328, 1071, 1108, 1438
HspAI	GCGC	2 cut(s)	307, 1730
Kpn2I	TCCGGA	1 cut(s)	1099
LmnI	GCTCC	6 cut(s)	97, 895, 1013, 1130, 2068, 2118
Lsp1109I	GCAGC	8 cut(s)	63, 108, 120, 165, 197, 772, 800, 1540
LweI	GCATC	9 cut(s)	234, 465, 555, 583, 673, 1247, 1579, 1806, 2065
MaeI	CTAG	1 cut(s)	486
MaeII	ACGT	3 cut(s)	732, 1339, 2177
MboII	GAAGA	4 cut(s)	523, 1308, 2066, 2160
MfeI	CAATTG	1 cut(s)	1832
MflI	RGATCY	5 cut(s)	1006, 1137, 1186, 1784, 1954
MhlI	GDGCHC	5 cut(s)	680, 900, 1269, 1681, 1845
MluI	ACGCGT	1 cut(s)	1418
MlyI	GAGTC	2 cut(s)	430, 1763
MmeI	TCCRAC	3 cut(s)	297, 1065, 1296
Mph1103I	ATGCAT	2 cut(s)	1240, 1572
MroI	TCCGGA	1 cut(s)	1099
MseI	TTAA	6 cut(s)	429, 720, 1025, 1362, 1412, 1856
MspA1I	CMGCKG	2 cut(s)	156, 1684
MspCI	CTTAAG	2 cut(s)	719, 1855
MspI	CCGG	3 cut(s)	95, 264, 1100
MspR9I	CCNGG	5 cut(s)	300, 453, 921, 1135, 1775
MunI	CAATTG	1 cut(s)	1832
Mva1269I	GAATGC	2 cut(s)	858, 958
MvaI	CCWGG	5 cut(s)	300, 453, 921, 1135, 1775
MvnI	CGCG	2 cut(s)	207, 1420
NlaIII	CATG	4 cut(s)	328, 1071, 1108, 1438
NlaIV	GGNNCC	8 cut(s)	93, 468, 679, 1132, 1139, 1275, 1320, 2006
NmeAIII	GCCGAG	2 cut(s)	307, 359
NmuCI	GTSAC	4 cut(s)	37, 191, 1193, 1870
NsiI	ATGCAT	2 cut(s)	1240, 1572
NspI	RCATGY	1 cut(s)	1108
PaeR7I	CTCGAG	4 cut(s)	173, 248, 609, 1629
PciI	ACATGT	1 cut(s)	1104
PcsI	WCGNNNNNNNCGW	3 cut(s)	47, 59, 180
PctI	GAATGC	2 cut(s)	858, 958
PfeI	GAWTC	9 cut(s)	269, 340, 497, 883, 889, 995, 1486, 1610, 2156
Pfl23II	CGTACG	1 cut(s)	2174
PflMI	CCANNNNNTGG	1 cut(s)	2240
Ple19I	CGATCG	1 cut(s)	45
PleI	GAGTC	2 cut(s)	430, 1763
PpsI	GAGTC	2 cut(s)	430, 1763
PpuMI	RGGWCCY	1 cut(s)	1273
PscI	ACATGT	1 cut(s)	1104
PsiI	TTATAA	1 cut(s)	963
Psp5II	RGGWCCY	1 cut(s)	1273
Psp6I	CCWGG	5 cut(s)	298, 451, 919, 1133, 1773
PspGI	CCWGG	5 cut(s)	298, 451, 919, 1133, 1773
PspLI	CGTACG	1 cut(s)	2174
PspN4I	GGNNCC	8 cut(s)	93, 468, 679, 1132, 1139, 1275, 1320, 2006
PspPI	GGNCC	5 cut(s)	178, 279, 1273, 1318, 2004
PspPPI	RGGWCCY	1 cut(s)	1273
PspXI	VCTCGAGB	1 cut(s)	173
PstI	CTGCAG	2 cut(s)	81, 790
PstNI	CAGNNNCTG	3 cut(s)	892, 1466, 2143
PsuI	RGATCY	5 cut(s)	1006, 1137, 1186, 1784, 1954
PvuI	CGATCG	1 cut(s)	45
PvuII	CAGCTG	1 cut(s)	1684
RsaI	GTAC	5 cut(s)	637, 1145, 1653, 2036, 2176
RsaNI	GTAC	5 cut(s)	636, 1144, 1652, 2035, 2175
SaqAI	TTAA	6 cut(s)	429, 720, 1025, 1362, 1412, 1856
Sau96I	GGNCC	5 cut(s)	178, 279, 1273, 1318, 2004
SchI	GAGTC	2 cut(s)	430, 1763
ScrFI	CCNGG	5 cut(s)	300, 453, 921, 1135, 1775
SduI	GDGCHC	5 cut(s)	680, 900, 1269, 1681, 1845
SfaNI	GCATC	9 cut(s)	234, 465, 555, 583, 673, 1247, 1579, 1806, 2065
SfcI	CTRYAG	3 cut(s)	77, 786, 2298
Sfr274I	CTCGAG	4 cut(s)	173, 248, 609, 1629
SinI	GGWCC	3 cut(s)	1273, 1318, 2004
SlaI	CTCGAG	4 cut(s)	173, 248, 609, 1629
SmlI	CTYRAG	8 cut(s)	173, 248, 404, 609, 719, 1629, 1855, 1915
SmoI	CTYRAG	8 cut(s)	173, 248, 404, 609, 719, 1629, 1855, 1915
SsiI	CCGC	7 cut(s)	125, 134, 156, 207, 256, 261, 331
SspMI	CTAG	1 cut(s)	486
StyD4I	CCNGG	5 cut(s)	298, 451, 919, 1133, 1773
TaaI	ACNGT	5 cut(s)	749, 776, 1046, 2061, 2267
TaiI	ACGT	3 cut(s)	735, 1342, 2180
TaqI	TCGA	6 cut(s)	174, 249, 610, 1630, 1814, 2014
TatI	WGTACW	3 cut(s)	1143, 1651, 2034
TauI	GCSGC	3 cut(s)	127, 159, 210
TfiI	GAWTC	9 cut(s)	269, 340, 497, 883, 889, 995, 1486, 1610, 2156
Tru1I	TTAA	6 cut(s)	429, 720, 1025, 1362, 1412, 1856
Tru9I	TTAA	6 cut(s)	429, 720, 1025, 1362, 1412, 1856
TscAI	CASTG	6 cut(s)	18, 42, 1337, 1893, 2148, 2209
TseFI	GTSAC	4 cut(s)	37, 191, 1193, 1870
TseI	GCWGC	8 cut(s)	76, 108, 121, 153, 210, 785, 788, 1553
Tsp45I	GTSAC	4 cut(s)	37, 191, 1193, 1870
TspDTI	ATGAA	5 cut(s)	965, 1056, 1443, 2000, 2011
TspGWI	ACGGA	4 cut(s)	278, 1622, 1840, 2017
TspRI	CASTG	6 cut(s)	18, 42, 1337, 1893, 2148, 2209
Van91I	CCANNNNNTGG	1 cut(s)	2240
Vha464I	CTTAAG	2 cut(s)	719, 1855
VneI	GTGCAC	1 cut(s)	1677
VpaK11BI	GGWCC	3 cut(s)	1273, 1318, 2004
XapI	RAATTY	4 cut(s)	396, 940, 1531, 2029
XceI	RCATGY	1 cut(s)	1108
XhoI	CTCGAG	4 cut(s)	173, 248, 609, 1629
XmiI	GTMKAC	1 cut(s)	229
XspI	CTAG	1 cut(s)	486
Zsp2I	ATGCAT	2 cut(s)	1240, 1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.