Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

9563302 .. 9571075

Gene Structure 7774 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011457

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGGGTGAGGCAGGGGACTCTTTTCCTACGAAGCCAACGACTAGTTCAGTGACGATCGGCTCGTCGCTGATTCCGATAATCAACAAGCTGCAGGACATTCTGGCTCCCGTAGCCTCAGGCAGCGAATTGTCGAAGATTTCGCTGCCGCAAGTTGCCGTCGTGGGAAGCCAAAGCAGCGGCAAATCCAGCGTCCTCGAGGCCCTCGTCGGCCGTGACTTCCTCCCTCGCGGCTGCGATATTTGCACTCGTAGACCCCTCGTCTTGATGCTCGAGAATCGCCCGCCCAATTCCGCCCAAGATGCCGCTCAAACTGAGTGGGGCGAGTTCCGACATTTGCCTGGAAAGCGCTTTTTCGACTTCACCAGCATTCGCCGAGAGATTCAGGCTGAGACTGAAAGAGAAGCAGGACGGAACAGAGGGGTTTCGGATAAACAAATTCGGCTTAAGATTACCTCTCCGAATGTCCTTAATATGACTCTTGTAGATTTGCCTGGCATCACTAAGGTTCCGGTGGGTGATCAACCTAGTGACATAGAATCAAGGATCAGGAAGATGATAATGGGACATATTAGGCAAGAAAATTGCATTATATTGGCAGTTACTCCTGCCAACGCTGATTTAGCCACCTCTGATGCACTTCAACTCGCTAGAGAAGCTGACCCTACTGGTTTTCGTACCATTGGTGTCATCACCAAGCTGGATATAATGGACAAGGGCACCGATGCCAGCAACTTTTTGCTCGGGAAAGTTGTTCCCCTTAAGCTCGGTTATGTTGGTGTTGTCAACCGTTGTCAGGAGGACATTAATAAAAACCGTAGCATTGCTGCAGCACTTGCTTATGAGGACAAATTCTTCCGCGATAATCCAGTATATAGCAGTCTCTCTGATAGTTGCGGCATTCCCCAGTTAGCAAGGAAACTGAATCAGATTCTGGAGCACCATATCAGGATTGTTCTCCCTGGTTTGAAGGCTGAGTTGAATTCTCAGATGAATGCTATCTATAAGGAACTACAAACATATGGAAAAGTTATGGAATCCAAAACAGATATGGGAGCTGCTTTGTTGAACATTTTGTCAAAATACTGTGAAGCTTTTACTGCCATGTTGGATGGAAAAAATTCGGAGATGTTAACTAAAGAATTGTCAGGAGGAGCCAGGATCCAGTACATTTTCCAGTCAATTTTTGTAAAGAGCTTGCAGGAAGTAGATCCCTGTGACGATGTAACTGATGATGATATTCGAACGGCCATTCAAAATGCTTCTGGTGCAAGAGATGCTTTATTTGTGCCTGAGGTCCCATTTGAAGTTTTAGTTAGAAGAGAGATTGCACGCTTGCTAGACCCAAGCCTTCAGTGTCTTCGTTTTGTTTATGAGGAACTGGTTAAGATTAGCCGCACTTGTGAGGTTACTGAGTTGCAAAGGTTTCCAGTATTGAGAATGCGTTTGGATGAAGTCATGGTAAAATTTTTGCGTGATGGTGCACAGCCTGCTGAGAGAATGATAGAAAATCTTATTGAGATGGAGGCAGATTATATAAACACTTCGCACCCAAATTTTTTAGGTGGGAACAGAGCTGCTGAGATTGCTATGCATGAGTTGAAATCACCACAGATATCTCTGGGCGTAACGGATGCTGAAGCCCAAACTTCTCGAGTGGCTTCGGCAAAGAATGGACAATTACCAAATCAGTATTTGGATGGCCTCACTTCTTTGAAGGATGCCTTACAGGGAAGTCGTTCACAGCTGAATAACAATAAACCTGTATCTGGAGGTTCCACAAGGACTTGGGGTCTTCCATCATTATTTGGGAATCGGACATCATCTGAAGGCTCCCTGGATAGCAGATCTTTTGGTGAACAAAACCATTCACAATCGATGCCCTCTGTAATCCAATTGAGAGAGCCCCCATCCATCTTAAGGCCAGTTGAAGTGACAGAGCATAAAGCAGTGGAAATTGTCATAACCAAATTACTCATGCGGTCATATTATGACATTGTCAGAAAAAACATTCAAGATCTTGTTCCAAAAGCAATTATGCACTTTCTGGTCAATCTTACAAAACGGACCCTTCATCGAACCTTCATTCAAAAGTTCTACAGAGAGAACCTGTTTGAAGAACTGTTGCAGGAGCAGGATGCATTTTTATTGAAAAGAAAACATATCCAAGAATTGCTTCCAGTTTTGGAACAATCTTTGCAGACACTGGAGAAAGTTGAATTTGATGTCTCATGCCGTACTTCAAGTTTTGGAACTGATGCTTCCACTGAACTTCCAAGAATTACAAGGATTTCACCACCCCATCAACAATACTCAACAACCAGTGACTGTCACAGGTCCTTCCACCAAAGCAATCTCTTGATCATGCTGTGGAATCTTGTGAGAAGGAATAGGGTGAAGGGAATCAAGGAAAGAAGCGGAGCAGAGGGGGTAAAAGGAAACGTGACAAGAAGTTTGCAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

821

Amino Acids

91.57

Weight (kDa)

8.16

Isoelectric Point (pI)

52.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 233	1.4e-53	Dynamin family
Dynamin_M	PF01031	241 - 526	1.1e-103	Dynamin central region
GED	PF02212	650 - 738	9e-22	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	716
AccBSI	CCGCTC	1 cut(s)	305
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	2 cut(s)	228, 858
AclWI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AcoI	YGGCCR	2 cut(s)	208, 1245
AcsI	RAATTY	7 cut(s)	435, 848, 979, 1117, 1463, 1552, 2216
AcuI	CTGAAG	3 cut(s)	1334, 1656, 1845
AfaI	GTAC	3 cut(s)	676, 1166, 2236
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	3 cut(s)	793, 1766, 1917
AflII	CTTAAG	3 cut(s)	443, 758, 1915
AhdI	GACNNNNNGTC	2 cut(s)	257, 1788
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	5 cut(s)	337, 490, 958, 1154, 1833
AjuI	GAANNNNNNNTTGG	4 cut(s)	28, 60, 2157, 2189
AluBI	AGCT	9 cut(s)	88, 656, 697, 763, 1055, 1091, 1194, 1574, 1744
AluI	AGCT	9 cut(s)	88, 656, 697, 763, 1055, 1091, 1194, 1574, 1744
Alw21I	GWGCWC	2 cut(s)	939, 1483
Alw26I	GTCTC	3 cut(s)	383, 884, 2230
Alw44I	GTGCAC	1 cut(s)	1479
AlwI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AlwNI	CAGNNNCTG	3 cut(s)	931, 2203, 2325
Ama87I	CYCGRG	4 cut(s)	194, 269, 740, 1650
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	5 cut(s)	198, 208, 1245, 1699, 1919
ApaLI	GTGCAC	1 cut(s)	1479
ApoI	RAATTY	7 cut(s)	435, 848, 979, 1117, 1463, 1552, 2216
ArsI	GACNNNNNNTTYG	3 cut(s)	174, 206, 2434
AseI	ATTAAT	1 cut(s)	804
Asp700I	GAANNNNTTC	3 cut(s)	1117, 1735, 2172
AspLEI	GCGC	1 cut(s)	348
AspS9I	GGNCC	4 cut(s)	199, 1294, 2064, 2334
AsuHPI	GGTGA	8 cut(s)	17, 352, 527, 682, 1596, 1865, 2283, 2404
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	4 cut(s)	194, 269, 740, 1650
AvaII	GGWCC	3 cut(s)	1294, 2064, 2334
AxyI	CCTNAGG	2 cut(s)	115, 1290
BaeGI	GKGCMC	2 cut(s)	719, 1483
BamHI	GGATCC	1 cut(s)	1158
BanI	GGYRCC	1 cut(s)	716
BanII	GRGCYC	1 cut(s)	1905
BbsI	GAAGAC	2 cut(s)	1349, 1784
Bbv12I	GWGCWC	2 cut(s)	939, 1483
BbvI	GCAGC	9 cut(s)	75, 129, 132, 186, 218, 811, 839, 1042, 1561
BccI	CCATC	8 cut(s)	1103, 1469, 1513, 1691, 1804, 1915, 1919, 2307
BceAI	ACGGC	4 cut(s)	140, 195, 1260, 2217
BciT130I	CCWGG	5 cut(s)	339, 492, 960, 1156, 1835
BclI	TGATCA	2 cut(s)	517, 2358
BcoDI	GTCTC	3 cut(s)	383, 884, 2230
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	4 cut(s)	42, 525, 648, 1337
BfmI	CTRYAG	3 cut(s)	89, 825, 2095
BfoI	RGCGCY	1 cut(s)	349
BfrI	CTTAAG	3 cut(s)	443, 758, 1915
BglII	AGATCT	2 cut(s)	1844, 2014
Bme1390I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1835
Bme18I	GGWCC	3 cut(s)	1294, 2064, 2334
BmeRI	GACNNNNNGTC	2 cut(s)	257, 1788
BmeT110I	CYCGRG	4 cut(s)	194, 269, 740, 1650
BmgT120I	GGNCC	4 cut(s)	199, 1294, 2064, 2334
BmiI	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1774, 1831, 2066
BmrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1835
BmrI	ACTGGG	1 cut(s)	898
BmuI	ACTGGG	1 cut(s)	898
BpiI	GAAGAC	2 cut(s)	1349, 1784
BpmI	CTGGAG	3 cut(s)	953, 1788, 2225
Bpu14I	TTCGAA	1 cut(s)	1240
Bsa29I	ATCGAT	1 cut(s)	1874
BsaJI	CCNNGG	2 cut(s)	958, 1833
BsaWI	WCCGGW	1 cut(s)	508
Bsc4I	CCNNNNNNNGG	3 cut(s)	793, 1766, 1917
Bse21I	CCTNAGG	2 cut(s)	115, 1290
Bse3DI	GCAATG	1 cut(s)	819
BseBI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1835
BseCI	ATCGAT	1 cut(s)	1874
BseDI	CCNNGG	2 cut(s)	958, 1833
BseGI	GGATG	7 cut(s)	1114, 1453, 1636, 1702, 1723, 1907, 2140
BseLI	CCNNNNNNNGG	3 cut(s)	793, 1766, 1917
BseMI	GCAATG	1 cut(s)	819
BseMII	CTCAG	9 cut(s)	129, 303, 378, 963, 998, 1281, 1401, 1482, 1569
BseRI	GAGGAG	1 cut(s)	1164
BseSI	GKGCMC	2 cut(s)	719, 1483
BseX3I	CGGCCG	1 cut(s)	208
BseXI	GCAGC	9 cut(s)	75, 129, 132, 186, 218, 811, 839, 1042, 1561
Bsh1236I	CGCG	2 cut(s)	228, 858
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	5 cut(s)	200, 210, 1247, 1701, 1921
BshNI	GGYRCC	1 cut(s)	716
BshVI	ATCGAT	1 cut(s)	1874
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	2 cut(s)	939, 1483
BsiHKCI	CYCGRG	4 cut(s)	194, 269, 740, 1650
BsiSI	CCGG	1 cut(s)	509
BslFI	GGGAC	3 cut(s)	29, 576, 1280
BslI	CCNNNNNNNGG	3 cut(s)	793, 1766, 1917
BsmAI	GTCTC	3 cut(s)	383, 884, 2230
BsmFI	GGGAC	3 cut(s)	29, 576, 1280
BsmI	GAATGC	4 cut(s)	366, 897, 997, 1443
BsnI	GGCC	5 cut(s)	200, 210, 1247, 1701, 1921
BsoBI	CYCGRG	4 cut(s)	194, 269, 740, 1650
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	4 cut(s)	719, 939, 1483, 1905
Bsp143I	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
BspANI	GGCC	5 cut(s)	200, 210, 1247, 1701, 1921
BspCNI	CTCAG	9 cut(s)	128, 304, 379, 964, 997, 1282, 1402, 1483, 1570
BspDI	ATCGAT	1 cut(s)	1874
BspFNI	CGCG	2 cut(s)	228, 858
BspLI	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1774, 1831, 2066
BspMAI	CTGCAG	2 cut(s)	93, 829
BspPI	GGATC	4 cut(s)	551, 1153, 1166, 1202
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	1 cut(s)	716
BspTI	CTTAAG	3 cut(s)	443, 758, 1915
BsrBI	CCGCTC	1 cut(s)	305
BsrDI	GCAATG	1 cut(s)	819
BssECI	CCNNGG	2 cut(s)	958, 1833
BssMI	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
Bst2UI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1835
Bst4CI	ACNGT	5 cut(s)	788, 815, 1085, 2121, 2327
Bst6I	CTCTTC	1 cut(s)	1312
BstAFI	CTTAAG	3 cut(s)	443, 758, 1915
BstAPI	GCANNNNNTGC	3 cut(s)	833, 1274, 1487
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
BstF5I	GGATG	7 cut(s)	1114, 1453, 1636, 1702, 1723, 1907, 2140
BstFNI	CGCG	2 cut(s)	228, 858
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	1 cut(s)	348
BstKTI	GATC	8 cut(s)	57, 520, 546, 1161, 1210, 1847, 2017, 2361
BstMAI	GTCTC	3 cut(s)	383, 884, 2230
BstMBI	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1835
BstSCI	CCNGG	5 cut(s)	337, 490, 958, 1154, 1833
BstSFI	CTRYAG	3 cut(s)	89, 825, 2095
BstSLI	GKGCMC	2 cut(s)	719, 1483
BstUI	CGCG	2 cut(s)	228, 858
BstV1I	GCAGC	9 cut(s)	75, 129, 132, 186, 218, 811, 839, 1042, 1561
BstV2I	GAAGAC	2 cut(s)	1349, 1784
BstX2I	RGATCY	4 cut(s)	1158, 1207, 1844, 2014
BstYI	RGATCY	4 cut(s)	1158, 1207, 1844, 2014
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	1874
Bsu36I	CCTNAGG	2 cut(s)	115, 1290
BsuRI	GGCC	5 cut(s)	200, 210, 1247, 1701, 1921
BsuTUI	ATCGAT	1 cut(s)	1874
BtsCI	GGATG	7 cut(s)	1114, 1453, 1636, 1702, 1723, 1907, 2140
BtsI	GCAGTG	1 cut(s)	1953
BtsIMutI	CAGTG	6 cut(s)	54, 1358, 1953, 2201, 2262, 2326
Cac8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
CaiI	CAGNNNCTG	3 cut(s)	931, 2203, 2325
CfoI	GCGC	1 cut(s)	348
Cfr13I	GGNCC	4 cut(s)	199, 1294, 2064, 2334
ClaI	ATCGAT	1 cut(s)	1874
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	675, 1165, 2235
CspCI	CAANNNNNGTGG	2 cut(s)	296, 331
CviAII	CATG	6 cut(s)	1102, 1456, 1592, 1975, 2229, 2362
CviQI	GTAC	3 cut(s)	675, 1165, 2235
DpnI	GATC	8 cut(s)	56, 519, 545, 1160, 1209, 1846, 2016, 2360
DpnII	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
DriI	GACNNNNNGTC	2 cut(s)	257, 1788
EaeI	YGGCCR	2 cut(s)	208, 1245
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	1 cut(s)	1312
Eam1105I	GACNNNNNGTC	2 cut(s)	257, 1788
EarI	CTCTTC	1 cut(s)	1312
EciI	GGCGGA	1 cut(s)	280
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	1 cut(s)	1905
Eco32I	GATATC	1 cut(s)	1614
Eco47I	GGWCC	3 cut(s)	1294, 2064, 2334
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco57I	CTGAAG	3 cut(s)	1334, 1656, 1845
Eco81I	CCTNAGG	2 cut(s)	115, 1290
Eco88I	CYCGRG	4 cut(s)	194, 269, 740, 1650
EcoO109I	RGGNCCY	3 cut(s)	199, 1294, 2334
EcoRI	GAATTC	1 cut(s)	979
EcoRII	CCWGG	5 cut(s)	337, 490, 958, 1154, 1833
EcoRV	GATATC	1 cut(s)	1614
EcoT22I	ATGCAT	2 cut(s)	1593, 2140
EcoT38I	GRGCYC	1 cut(s)	1905
FaeI	CATG	6 cut(s)	1105, 1459, 1595, 1978, 2232, 2365
FalI	AAGNNNNNCTT	6 cut(s)	1261, 1293, 1706, 1738, 2157, 2189
FaqI	GGGAC	3 cut(s)	29, 576, 1280
FatI	CATG	6 cut(s)	1101, 1455, 1591, 1974, 2228, 2361
FauI	CCCGC	1 cut(s)	288
FauNDI	CATATG	1 cut(s)	1018
FbaI	TGATCA	2 cut(s)	517, 2358
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	7 cut(s)	1121, 1460, 1643, 1709, 1730, 1894, 2147
FriOI	GRGCYC	1 cut(s)	1905
FspBI	CTAG	4 cut(s)	42, 525, 648, 1337
GlaI	GCGC	1 cut(s)	347
GsuI	CTGGAG	3 cut(s)	953, 1788, 2225
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	5 cut(s)	200, 210, 1247, 1701, 1921
HapII	CCGG	1 cut(s)	509
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	348
Hin1II	CATG	6 cut(s)	1105, 1459, 1595, 1978, 2232, 2365
Hin6I	GCGC	1 cut(s)	346
HinP1I	GCGC	1 cut(s)	346
HincII	GTYRAC	2 cut(s)	784, 1131
HindII	GTYRAC	2 cut(s)	784, 1131
HindIII	AAGCTT	1 cut(s)	1089
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	1 cut(s)	509
HphI	GGTGA	8 cut(s)	17, 352, 527, 682, 1596, 1865, 2283, 2404
Hpy166II	GTNNAC	6 cut(s)	251, 784, 1131, 1481, 1739, 1856
Hpy8I	GTNNAC	6 cut(s)	251, 784, 1131, 1481, 1739, 1856
Hpy99I	CGWCG	3 cut(s)	67, 161, 209
HpyAV	CCTTC	9 cut(s)	961, 1358, 1708, 1820, 2078, 2089, 2347, 2376, 2389
HpyCH4III	ACNGT	5 cut(s)	788, 815, 1085, 2121, 2327
HpyCH4IV	ACGT	1 cut(s)	2439
HpySE526I	ACGT	1 cut(s)	2439
Hsp92II	CATG	6 cut(s)	1105, 1459, 1595, 1978, 2232, 2365
HspAI	GCGC	1 cut(s)	346
Ksp22I	TGATCA	2 cut(s)	517, 2358
KspAI	GTTAAC	1 cut(s)	1131
Kzo9I	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
LmnI	GCTCC	7 cut(s)	109, 934, 1052, 1151, 1835, 2128, 2417
Lsp1109I	GCAGC	9 cut(s)	75, 129, 132, 186, 218, 811, 839, 1042, 1561
MaeI	CTAG	4 cut(s)	42, 525, 648, 1337
MaeII	ACGT	1 cut(s)	2439
MalI	GATC	8 cut(s)	56, 519, 545, 1160, 1209, 1846, 2016, 2360
MbiI	CCGCTC	1 cut(s)	305
MboI	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
MboII	GAAGA	7 cut(s)	145, 562, 844, 1329, 1349, 1784, 2126
MfeI	CAATTG	1 cut(s)	1892
MflI	RGATCY	4 cut(s)	1158, 1207, 1844, 2014
MhlI	GDGCHC	4 cut(s)	719, 939, 1483, 1905
MlyI	GAGTC	2 cut(s)	11, 469
MmeI	TCCRAC	2 cut(s)	352, 1086
Mph1103I	ATGCAT	2 cut(s)	1593, 2140
MroXI	GAANNNNTTC	3 cut(s)	1117, 1735, 2172
MseI	TTAA	7 cut(s)	444, 468, 759, 804, 1130, 1383, 1916
MspA1I	CMGCKG	2 cut(s)	177, 1744
MspCI	CTTAAG	3 cut(s)	443, 758, 1915
MspI	CCGG	1 cut(s)	509
MspR9I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1835
MunI	CAATTG	1 cut(s)	1892
Mva1269I	GAATGC	4 cut(s)	366, 897, 997, 1443
MvaI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1835
MvnI	CGCG	2 cut(s)	228, 858
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
NlaIII	CATG	6 cut(s)	1105, 1459, 1595, 1978, 2232, 2365
NlaIV	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1774, 1831, 2066
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	8 cut(s)	49, 212, 527, 1214, 1930, 2321, 2327, 2440
NsiI	ATGCAT	2 cut(s)	1593, 2140
NspV	TTCGAA	1 cut(s)	1240
PaeR7I	CTCGAG	3 cut(s)	194, 269, 1650
PcsI	WCGNNNNNNNCGW	4 cut(s)	35, 59, 71, 201
PctI	GAATGC	4 cut(s)	366, 897, 997, 1443
PdmI	GAANNNNTTC	3 cut(s)	1117, 1735, 2172
PflFI	GACNNNGTC	1 cut(s)	1994
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	2 cut(s)	11, 469
PpsI	GAGTC	2 cut(s)	11, 469
PpuMI	RGGWCCY	2 cut(s)	1294, 2334
PshBI	ATTAAT	1 cut(s)	804
Psp5II	RGGWCCY	2 cut(s)	1294, 2334
Psp6I	CCWGG	5 cut(s)	337, 490, 958, 1154, 1833
PspGI	CCWGG	5 cut(s)	337, 490, 958, 1154, 1833
PspN4I	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1774, 1831, 2066
PspPI	GGNCC	4 cut(s)	199, 1294, 2064, 2334
PspPPI	RGGWCCY	2 cut(s)	1294, 2334
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	93, 829
PstNI	CAGNNNCTG	3 cut(s)	931, 2203, 2325
PsuI	RGATCY	4 cut(s)	1158, 1207, 1844, 2014
PsyI	GACNNNGTC	1 cut(s)	1994
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1744
RsaI	GTAC	3 cut(s)	676, 1166, 2236
RsaNI	GTAC	3 cut(s)	675, 1165, 2235
SaqAI	TTAA	7 cut(s)	444, 468, 759, 804, 1130, 1383, 1916
Sau3AI	GATC	8 cut(s)	54, 517, 543, 1158, 1207, 1844, 2014, 2358
Sau96I	GGNCC	4 cut(s)	199, 1294, 2064, 2334
SchI	GAGTC	2 cut(s)	11, 469
ScrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1835
SduI	GDGCHC	4 cut(s)	719, 939, 1483, 1905
SfcI	CTRYAG	3 cut(s)	89, 825, 2095
Sfr274I	CTCGAG	3 cut(s)	194, 269, 1650
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	3 cut(s)	1294, 2064, 2334
SlaI	CTCGAG	3 cut(s)	194, 269, 1650
SmlI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1915
SmoI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1915
SpeI	ACTAGT	1 cut(s)	41
SspMI	CTAG	4 cut(s)	42, 525, 648, 1337
StyD4I	CCNGG	5 cut(s)	337, 490, 958, 1154, 1833
TaaI	ACNGT	5 cut(s)	788, 815, 1085, 2121, 2327
TaiI	ACGT	1 cut(s)	2442
TaqI	TCGA	8 cut(s)	131, 195, 270, 354, 1240, 1651, 1874, 2074
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	6 cut(s)	148, 180, 231, 305, 897, 1395
Tru1I	TTAA	7 cut(s)	444, 468, 759, 804, 1130, 1383, 1916
Tru9I	TTAA	7 cut(s)	444, 468, 759, 804, 1130, 1383, 1916
TscAI	CASTG	6 cut(s)	54, 1358, 1953, 2208, 2269, 2326
TseFI	GTSAC	8 cut(s)	49, 212, 527, 1214, 1930, 2321, 2327, 2440
Tsp45I	GTSAC	8 cut(s)	49, 212, 527, 1214, 1930, 2321, 2327, 2440
TspDTI	ATGAA	4 cut(s)	1004, 1464, 2060, 2071
TspGWI	ACGGA	3 cut(s)	424, 1643, 2077
TspRI	CASTG	6 cut(s)	54, 1358, 1953, 2208, 2269, 2326
Tth111I	GACNNNGTC	1 cut(s)	1994
Vha464I	CTTAAG	3 cut(s)	443, 758, 1915
VneI	GTGCAC	1 cut(s)	1479
VpaK11BI	GGWCC	3 cut(s)	1294, 2064, 2334
VspI	ATTAAT	1 cut(s)	804
XapI	RAATTY	7 cut(s)	435, 848, 979, 1117, 1463, 1552, 2216
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XhoI	CTCGAG	3 cut(s)	194, 269, 1650
XmiI	GTMKAC	1 cut(s)	250
XmnI	GAANNNNTTC	3 cut(s)	1117, 1735, 2172
XspI	CTAG	4 cut(s)	42, 525, 648, 1337
Zsp2I	ATGCAT	2 cut(s)	1593, 2140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.