Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001434.1

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

81786 .. 91722

Gene Structure 9937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001434.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

atgggcgaggcaagggactcttttcctacgaagccgacgactagttcagtgacgatcggctcgtcgctgattccgataatcaacaagctgcaggacattctggctcccgtagcctcaggcagcgaattgtccaagatttcgctgccgcaagttgccgtcgtgggaagccaaagcagcggcaaatccagcgtcctcgaggccctcgtcggccgtgacttcctccctcgcggctgcgatatttgcactcgtagacctctcgtcttgatgctcgagaatcgcccgcccaatcccgcccaggatgccgcccaaaccgagtggggcgagtttcggcatttgcctggaaagcgcttctacgacttcaccaccattcgcggagagattcaggctgagactgaaagagaggcaggattgaacaaaggagtttcgggtaaacaaattcggcttaagattacctctccaaatgtccttaatatgactcttgttgatttgcctggcatcactaaggttcctgtgggagatcaacctagtgacatagaattaaggatcaggaagatgataatgggacatattaggcaagaaaattgcattatattggcagttactcctgccaacgctgatttagccacctctgatgcacttcaactcgctagagaagctgaccctaccggttttcgtaccattggtgtcatcaccaagctggatataatggacaggggcaccgatgccagcaaattgttgctcgggaaagttgttccccttaagcttggttatgttggtgttgtcaaccgttgtcaggaggacattaataaaaaccgtagcattgctgcagcacttgcttatgaggataaattcttccgcaataatccagtatatagcagtctctctgatcgttgcggcattccccagttagcaaggaaactgaatcagattctggagcaccatatcaggattgttctccctggtttgaaggctgagttgaattctcagatgaatgctatctataaggaactacaaacatatggaaaagttatggaatccaaaacagatctgggagcaactttgttgaacattttatcaaaatactgtgaagcttttactgccatgttggacggaaaaaatccagagatgttaactaaagaattgtcaggaggagccaggatccagtacattttccagtcaatttttgtaaagagcttgcaggaagtagatccctgtgacgatgtaactgataatgatattcgaaccgccattcaaaatgcatctggtgcaagagatgctttgtttgtgcccgaggtcccatttgaagttttagttaaaagagagattgcacgcttgctagacccaagccttcagtgtcttcgttttgtttatgaggaactggttaagattagccgcacttgtgaggttactgagttgcaaaggtttccagtattgagaatgcgtttggatgaagtcatggtaaactttttgcgtgatggtgcacagcctgctgagagaatgatagaaaatcttattgagatggaggcagattatataaacacttcacacccaaattttttaggtgggaacagagctgctgagattgctatgcatgagttgaaatcaccacagatatctctgggcgtaacggatgctgaagcccaaacttctcgagtggcttcggcaaagaatggacaattaccaaatcagggaagtccttcacagctgaataacaataaacctgtatctggaggttccacaaggacttggggtcttccattttttgggaatcggacaccatctgaaggctccctggatagcagatcttttggtgaacaaaaccattcacaatcaatgccctctgtaatccaattgagagagcccccatccatcttaaggccaattgaagtgacagagcataaagccgtggaaattgtcatcaccaaattactcttgcggtcatattatgacattgtcagaaaaaacattcaagatcttgttccaaaagcaattatgcactttctggtcaatcttacaaaacggacccttcatcgaaccttcattcaaaagttctacagagagaacctgtttgaagaactgttgcaggagcaggatgcatttgtattgaaaagaaaacatatccaagaattgctcccagttttggaacaatctttgcagacactggagaaagttgaatttgatgtctcatgccgtacttctagttttggaactgatgcttccactgaacttccaagaattagaaggatttcaccaccccatcaacaatactcaacaaccagtgggaatcaaggaaagaagaggagcagagggggtaaaaggaaacgtgacaagaagtttgcagcattgacaagagcagcgaaagaagtggacaaagaagcagcagaagtgcagaacaaagggtcaggggaggggaagaaagttgataggcaggatttggtggcttatgaggatgaagtgaaggagttgaagttgcgagttggaaagcttgaggaaatggtgagtagaaacaataaagagaaggtggtttatgaggctgcaatgagaaaattgattgaaactcgcaaagtcttggcagagcgggagcggagcagctcaggcttctgcatcaaatccggttgtcacttcacacctgatcgaacgggtcttgtcgagctcgaagttccatatcggagttctagttcggcgacgatggagagaggtaagatttctccgaggtcgtcgccgggttggagtttccttcgaaggtcgagacgatgtcgtcgctgtcgatctgtgggagaagtaagggaatccgtcggcggcgacagtgatatgtgggagacaagagtcggcgaagggagacaacggcgaacagtggcggaaccaggatccaattcttgtctaggctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

962

Amino Acids

107.45

Weight (kDa)

9.14

Isoelectric Point (pI)

53.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2757
AbsI	CCTCGAGG	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	716
AccB7I	CCANNNNNTGG	1 cut(s)	1763
AccBSI	CCGCTC	2 cut(s)	2578, 2584
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	2 cut(s)	228, 372
AclWI	GGATC	6 cut(s)	551, 1153, 1166, 1202, 2862, 2875
AcoI	YGGCCR	1 cut(s)	208
AcsI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2174
AcuI	CTGAAG	3 cut(s)	1334, 1656, 1803
AfaI	GTAC	3 cut(s)	676, 1166, 2194
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	7 cut(s)	793, 1688, 1727, 1763, 1784, 1875, 2140
AflII	CTTAAG	3 cut(s)	443, 758, 1873
AgeI	ACCGGT	1 cut(s)	665
AhdI	GACNNNNNGTC	2 cut(s)	257, 1749
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	7 cut(s)	294, 337, 490, 958, 1154, 1791, 2863
AloI	GAACNNNNNNTCC	2 cut(s)	2662, 2694
Alw21I	GWGCWC	3 cut(s)	939, 1483, 2655
Alw26I	GTCTC	6 cut(s)	383, 884, 2188, 2743, 2813, 2833
Alw44I	GTGCAC	1 cut(s)	1479
AlwI	GGATC	6 cut(s)	551, 1153, 1166, 1202, 2862, 2875
AlwNI	CAGNNNCTG	2 cut(s)	931, 2161
Ama87I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	3 cut(s)	198, 208, 1877
ApaLI	GTGCAC	1 cut(s)	1479
ApoI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2174
ArsI	GACNNNNNNTTYG	4 cut(s)	174, 206, 2318, 2350
AseI	ATTAAT	1 cut(s)	804
AsiGI	ACCGGT	1 cut(s)	665
Asp700I	GAANNNNTTC	2 cut(s)	1696, 2245
AspLEI	GCGC	1 cut(s)	348
AspS9I	GGNCC	3 cut(s)	199, 1294, 2022
AsuC2I	CCSGG	1 cut(s)	2724
AsuHPI	GGTGA	7 cut(s)	352, 682, 1596, 1823, 1912, 2241, 2509
AsuII	TTCGAA	2 cut(s)	1240, 2740
AvaI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
AvaII	GGWCC	2 cut(s)	1294, 2022
AxyI	CCTNAGG	1 cut(s)	115
BaeGI	GKGCMC	3 cut(s)	719, 1290, 1483
BamHI	GGATCC	2 cut(s)	1158, 2867
BanI	GGYRCC	1 cut(s)	716
BanII	GRGCYC	2 cut(s)	1863, 2655
BbsI	GAAGAC	2 cut(s)	1349, 1745
Bbv12I	GWGCWC	3 cut(s)	939, 1483, 2655
BccI	CCATC	7 cut(s)	1469, 1513, 1786, 1873, 1877, 2265, 2683
BceAI	ACGGC	5 cut(s)	140, 195, 1889, 2175, 2861
BciT130I	CCWGG	7 cut(s)	296, 339, 492, 960, 1156, 1793, 2865
BcnI	CCSGG	1 cut(s)	2724
BcoDI	GTCTC	6 cut(s)	383, 884, 2188, 2743, 2813, 2833
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	7 cut(s)	42, 525, 648, 1337, 2199, 2676, 2882
BfmI	CTRYAG	3 cut(s)	89, 825, 2053
BfoI	RGCGCY	1 cut(s)	349
BfrI	CTTAAG	3 cut(s)	443, 758, 1873
BglII	AGATCT	3 cut(s)	1045, 1802, 1972
Bme1390I	CCNGG	8 cut(s)	296, 339, 492, 960, 1156, 1793, 2724, 2865
Bme18I	GGWCC	2 cut(s)	1294, 2022
BmeRI	GACNNNNNGTC	2 cut(s)	257, 1749
BmeT110I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BmgT120I	GGNCC	3 cut(s)	199, 1294, 2022
BmrFI	CCNGG	8 cut(s)	296, 339, 492, 960, 1156, 1793, 2724, 2865
BmrI	ACTGGG	2 cut(s)	898, 2129
BmuI	ACTGGG	2 cut(s)	898, 2129
BoxI	GACNNNNGTC	1 cut(s)	2825
BpiI	GAAGAC	2 cut(s)	1349, 1745
BpmI	CTGGAG	3 cut(s)	953, 1749, 2183
Bpu10I	CCTNAGC	1 cut(s)	2593
Bpu14I	TTCGAA	2 cut(s)	1240, 2740
BpuEI	CTTGAG	1 cut(s)	2507
BpuMI	CCSGG	1 cut(s)	2724
BsaJI	CCNNGG	6 cut(s)	294, 958, 1290, 1791, 1905, 2711
BsaWI	WCCGGW	2 cut(s)	665, 2612
BsaXI	ACNNNNNCTCC	4 cut(s)	2453, 2483, 2662, 2692
Bsc4I	CCNNNNNNNGG	7 cut(s)	793, 1688, 1727, 1763, 1784, 1875, 2140
Bse118I	RCCGGY	1 cut(s)	665
Bse1I	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2135, 2166, 2277
Bse21I	CCTNAGG	1 cut(s)	115
Bse3DI	GCAATG	2 cut(s)	819, 2544
BseBI	CCWGG	7 cut(s)	296, 339, 492, 960, 1156, 1793, 2865
BseDI	CCNNGG	6 cut(s)	294, 958, 1290, 1791, 1905, 2711
BseGI	GGATG	6 cut(s)	304, 1453, 1636, 1865, 2098, 2455
BseLI	CCNNNNNNNGG	7 cut(s)	793, 1688, 1727, 1763, 1784, 1875, 2140
BseMI	GCAATG	2 cut(s)	819, 2544
BseMII	CTCAG	8 cut(s)	129, 378, 963, 998, 1401, 1482, 1569, 2607
BseNI	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2135, 2166, 2277
BseRI	GAGGAG	2 cut(s)	1164, 2314
BseSI	GKGCMC	3 cut(s)	719, 1290, 1483
BseX3I	CGGCCG	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	2408
Bsh1236I	CGCG	2 cut(s)	228, 372
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	3 cut(s)	200, 210, 1879
BshNI	GGYRCC	1 cut(s)	716
BshTI	ACCGGT	1 cut(s)	665
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	3 cut(s)	939, 1483, 2655
BsiHKCI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BsiSI	CCGG	3 cut(s)	666, 2613, 2723
BslFI	GGGAC	3 cut(s)	29, 576, 1280
BslI	CCNNNNNNNGG	7 cut(s)	793, 1688, 1727, 1763, 1784, 1875, 2140
BsmAI	GTCTC	6 cut(s)	383, 884, 2188, 2743, 2813, 2833
BsmBI	CGTCTC	1 cut(s)	2743
BsmFI	GGGAC	3 cut(s)	29, 576, 1280
BsmI	GAATGC	3 cut(s)	897, 997, 1443
BsnI	GGCC	3 cut(s)	200, 210, 1879
BsoBI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Bsp119I	TTCGAA	2 cut(s)	1240, 2740
Bsp1286I	GDGCHC	6 cut(s)	719, 939, 1290, 1483, 1863, 2655
BspANI	GGCC	3 cut(s)	200, 210, 1879
BspCNI	CTCAG	8 cut(s)	128, 379, 964, 997, 1402, 1483, 1570, 2606
BspFNI	CGCG	2 cut(s)	228, 372
BspMAI	CTGCAG	2 cut(s)	93, 829
BspPI	GGATC	6 cut(s)	551, 1153, 1166, 1202, 2862, 2875
BspT104I	TTCGAA	2 cut(s)	1240, 2740
BspT107I	GGYRCC	1 cut(s)	716
BspTI	CTTAAG	3 cut(s)	443, 758, 1873
BsrBI	CCGCTC	2 cut(s)	2578, 2584
BsrDI	GCAATG	2 cut(s)	819, 2544
BsrFI	RCCGGY	1 cut(s)	665
BsrI	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2135, 2166, 2277
BssAI	RCCGGY	1 cut(s)	665
BssECI	CCNNGG	6 cut(s)	294, 958, 1290, 1791, 1905, 2711
Bst2UI	CCWGG	7 cut(s)	296, 339, 492, 960, 1156, 1793, 2865
Bst4CI	ACNGT	6 cut(s)	788, 815, 1085, 2079, 2807, 2854
Bst6I	CTCTTC	1 cut(s)	2291
BstAFI	CTTAAG	3 cut(s)	443, 758, 1873
BstAPI	GCANNNNNTGC	4 cut(s)	833, 1265, 1274, 1487
BstBI	TTCGAA	2 cut(s)	1240, 2740
BstC8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
BstDEI	CTNAG	9 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578, 2593
BstDSI	CCRYGG	1 cut(s)	1905
BstF5I	GGATG	6 cut(s)	304, 1453, 1636, 1865, 2098, 2455
BstFNI	CGCG	2 cut(s)	228, 372
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	1 cut(s)	348
BstMAI	GTCTC	6 cut(s)	383, 884, 2188, 2743, 2813, 2833
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	7 cut(s)	296, 339, 492, 960, 1156, 1793, 2865
BstPAI	GACNNNNGTC	1 cut(s)	2825
BstSCI	CCNGG	8 cut(s)	294, 337, 490, 958, 1154, 1791, 2722, 2863
BstSFI	CTRYAG	3 cut(s)	89, 825, 2053
BstSLI	GKGCMC	3 cut(s)	719, 1290, 1483
BstUI	CGCG	2 cut(s)	228, 372
BstV2I	GAAGAC	2 cut(s)	1349, 1745
BstX2I	RGATCY	6 cut(s)	1045, 1158, 1207, 1802, 1972, 2867
BstYI	RGATCY	6 cut(s)	1045, 1158, 1207, 1802, 1972, 2867
BstZI	CGGCCG	1 cut(s)	208
Bsu36I	CCTNAGG	1 cut(s)	115
BsuRI	GGCC	3 cut(s)	200, 210, 1879
BtgI	CCRYGG	1 cut(s)	1905
BtsCI	GGATG	6 cut(s)	304, 1453, 1636, 1865, 2098, 2455
BtsIMutI	CAGTG	7 cut(s)	54, 1358, 2159, 2220, 2284, 2812, 2859
Cac8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
CaiI	CAGNNNCTG	2 cut(s)	931, 2161
CfoI	GCGC	1 cut(s)	348
Cfr10I	RCCGGY	1 cut(s)	665
Cfr13I	GGNCC	3 cut(s)	199, 1294, 2022
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	675, 1165, 2193
CspAI	ACCGGT	1 cut(s)	665
CspCI	CAANNNNNGTGG	2 cut(s)	296, 331
CviAII	CATG	4 cut(s)	1102, 1456, 1592, 2187
CviQI	GTAC	3 cut(s)	675, 1165, 2193
DdeI	CTNAG	9 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578, 2593
DrdI	GACNNNNNNGTC	1 cut(s)	2757
DriI	GACNNNNNGTC	2 cut(s)	257, 1749
DseDI	GACNNNNNNGTC	1 cut(s)	2757
EaeI	YGGCCR	1 cut(s)	208
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	1 cut(s)	2291
Eam1105I	GACNNNNNGTC	2 cut(s)	257, 1749
EarI	CTCTTC	1 cut(s)	2291
EciI	GGCGGA	1 cut(s)	2873
Ecl136II	GAGCTC	1 cut(s)	2653
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	2 cut(s)	1863, 2655
Eco32I	GATATC	1 cut(s)	1614
Eco47I	GGWCC	2 cut(s)	1294, 2022
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco53kI	GAGCTC	1 cut(s)	2653
Eco57I	CTGAAG	3 cut(s)	1334, 1656, 1803
Eco81I	CCTNAGG	1 cut(s)	115
Eco88I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
EcoICRI	GAGCTC	1 cut(s)	2653
EcoO109I	RGGNCCY	2 cut(s)	199, 1294
EcoRI	GAATTC	1 cut(s)	979
EcoRII	CCWGG	7 cut(s)	294, 337, 490, 958, 1154, 1791, 2863
EcoRV	GATATC	1 cut(s)	1614
EcoT22I	ATGCAT	3 cut(s)	1261, 1593, 2098
EcoT38I	GRGCYC	2 cut(s)	1863, 2655
Esp3I	CGTCTC	1 cut(s)	2743
FaeI	CATG	4 cut(s)	1105, 1459, 1595, 2190
FalI	AAGNNNNNCTT	3 cut(s)	36, 1261, 1293
FaqI	GGGAC	3 cut(s)	29, 576, 1280
FatI	CATG	4 cut(s)	1101, 1455, 1591, 2186
FauI	CCCGC	3 cut(s)	288, 298, 2571
FauNDI	CATATG	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	6 cut(s)	311, 1460, 1643, 1852, 2105, 2462
FriOI	GRGCYC	2 cut(s)	1863, 2655
FspBI	CTAG	7 cut(s)	42, 525, 648, 1337, 2199, 2676, 2882
GlaI	GCGC	1 cut(s)	347
GsuI	CTGGAG	3 cut(s)	953, 1749, 2183
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	3 cut(s)	200, 210, 1879
HapII	CCGG	3 cut(s)	666, 2613, 2723
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	348
Hin1II	CATG	4 cut(s)	1105, 1459, 1595, 2190
Hin6I	GCGC	1 cut(s)	346
HinP1I	GCGC	1 cut(s)	346
HincII	GTYRAC	2 cut(s)	784, 1131
HindII	GTYRAC	2 cut(s)	784, 1131
HindIII	AAGCTT	3 cut(s)	761, 1089, 2483
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	3 cut(s)	666, 2613, 2723
HphI	GGTGA	7 cut(s)	352, 682, 1596, 1823, 1912, 2241, 2509
Hpy166II	GTNNAC	8 cut(s)	251, 431, 784, 1131, 1462, 1481, 1814, 2368
Hpy8I	GTNNAC	8 cut(s)	251, 431, 784, 1131, 1462, 1481, 1814, 2368
Hpy99I	CGWCG	8 cut(s)	40, 67, 161, 209, 2689, 2722, 2763, 2798
HpyCH4III	ACNGT	6 cut(s)	788, 815, 1085, 2079, 2807, 2854
HpyCH4IV	ACGT	1 cut(s)	2323
HpyF3I	CTNAG	9 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578, 2593
HpySE526I	ACGT	1 cut(s)	2323
Hsp92II	CATG	4 cut(s)	1105, 1459, 1595, 2190
HspAI	GCGC	1 cut(s)	346
KspAI	GTTAAC	1 cut(s)	1131
MaeI	CTAG	7 cut(s)	42, 525, 648, 1337, 2199, 2676, 2882
MaeII	ACGT	1 cut(s)	2323
MbiI	CCGCTC	2 cut(s)	2578, 2584
MboII	GAAGA	7 cut(s)	562, 844, 1349, 1745, 2084, 2308, 2425
MfeI	CAATTG	2 cut(s)	1850, 1881
MflI	RGATCY	6 cut(s)	1045, 1158, 1207, 1802, 1972, 2867
MhlI	GDGCHC	6 cut(s)	719, 939, 1290, 1483, 1863, 2655
MlyI	GAGTC	3 cut(s)	11, 469, 2835
MmeI	TCCRAC	3 cut(s)	1086, 2458, 2708
Mph1103I	ATGCAT	3 cut(s)	1261, 1593, 2098
MroXI	GAANNNNTTC	2 cut(s)	1696, 2245
MseI	TTAA	9 cut(s)	444, 468, 539, 759, 804, 1130, 1314, 1383, 1874
MspA1I	CMGCKG	2 cut(s)	177, 1705
MspCI	CTTAAG	3 cut(s)	443, 758, 1873
MspI	CCGG	3 cut(s)	666, 2613, 2723
MspR9I	CCNGG	8 cut(s)	296, 339, 492, 960, 1156, 1793, 2724, 2865
MunI	CAATTG	2 cut(s)	1850, 1881
Mva1269I	GAATGC	3 cut(s)	897, 997, 1443
MvaI	CCWGG	7 cut(s)	296, 339, 492, 960, 1156, 1793, 2865
MvnI	CGCG	2 cut(s)	228, 372
NciI	CCSGG	1 cut(s)	2724
NdeI	CATATG	1 cut(s)	1018
NlaIII	CATG	4 cut(s)	1105, 1459, 1595, 2190
NmuCI	GTSAC	7 cut(s)	49, 212, 527, 1214, 1888, 2324, 2618
NsiI	ATGCAT	3 cut(s)	1261, 1593, 2098
NspV	TTCGAA	2 cut(s)	1240, 2740
PaeR7I	CTCGAG	3 cut(s)	194, 269, 1650
PcsI	WCGNNNNNNNCGW	5 cut(s)	35, 59, 71, 201, 2764
PctI	GAATGC	3 cut(s)	897, 997, 1443
PdmI	GAANNNNTTC	2 cut(s)	1696, 2245
PfeI	GAWTC	9 cut(s)	70, 274, 379, 922, 928, 1034, 1768, 2284, 2789
PflFI	GACNNNGTC	2 cut(s)	1952, 2754
PflMI	CCANNNNNTGG	1 cut(s)	1763
PinAI	ACCGGT	1 cut(s)	665
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	3 cut(s)	11, 469, 2834
PpsI	GAGTC	3 cut(s)	11, 469, 2834
PpuMI	RGGWCCY	1 cut(s)	1294
PshAI	GACNNNNGTC	1 cut(s)	2825
PshBI	ATTAAT	1 cut(s)	804
Psp124BI	GAGCTC	1 cut(s)	2655
Psp5II	RGGWCCY	1 cut(s)	1294
Psp6I	CCWGG	7 cut(s)	294, 337, 490, 958, 1154, 1791, 2863
PspGI	CCWGG	7 cut(s)	294, 337, 490, 958, 1154, 1791, 2863
PspPI	GGNCC	3 cut(s)	199, 1294, 2022
PspPPI	RGGWCCY	1 cut(s)	1294
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	93, 829
PstNI	CAGNNNCTG	2 cut(s)	931, 2161
PsuI	RGATCY	6 cut(s)	1045, 1158, 1207, 1802, 1972, 2867
PsyI	GACNNNGTC	2 cut(s)	1952, 2754
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1705
RsaI	GTAC	3 cut(s)	676, 1166, 2194
RsaNI	GTAC	3 cut(s)	675, 1165, 2193
SacI	GAGCTC	1 cut(s)	2655
SaqAI	TTAA	9 cut(s)	444, 468, 539, 759, 804, 1130, 1314, 1383, 1874
Sau96I	GGNCC	3 cut(s)	199, 1294, 2022
SchI	GAGTC	3 cut(s)	11, 469, 2835
ScrFI	CCNGG	8 cut(s)	296, 339, 492, 960, 1156, 1793, 2724, 2865
SduI	GDGCHC	6 cut(s)	719, 939, 1290, 1483, 1863, 2655
SfcI	CTRYAG	3 cut(s)	89, 825, 2053
Sfr274I	CTCGAG	3 cut(s)	194, 269, 1650
SfuI	TTCGAA	2 cut(s)	1240, 2740
SinI	GGWCC	2 cut(s)	1294, 2022
SlaI	CTCGAG	3 cut(s)	194, 269, 1650
SmlI	CTYRAG	7 cut(s)	194, 269, 443, 758, 1650, 1873, 2486
SmoI	CTYRAG	7 cut(s)	194, 269, 443, 758, 1650, 1873, 2486
SpeI	ACTAGT	1 cut(s)	41
SspMI	CTAG	7 cut(s)	42, 525, 648, 1337, 2199, 2676, 2882
SstI	GAGCTC	1 cut(s)	2655
StyD4I	CCNGG	8 cut(s)	294, 337, 490, 958, 1154, 1791, 2722, 2863
TaaI	ACNGT	6 cut(s)	788, 815, 1085, 2079, 2807, 2854
TaiI	ACGT	1 cut(s)	2326
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	7 cut(s)	148, 180, 231, 305, 897, 1395, 2802
TfiI	GAWTC	9 cut(s)	70, 274, 379, 922, 928, 1034, 1768, 2284, 2789
Tru1I	TTAA	9 cut(s)	444, 468, 539, 759, 804, 1130, 1314, 1383, 1874
Tru9I	TTAA	9 cut(s)	444, 468, 539, 759, 804, 1130, 1314, 1383, 1874
TscAI	CASTG	7 cut(s)	54, 1358, 2166, 2227, 2284, 2812, 2859
TseFI	GTSAC	7 cut(s)	49, 212, 527, 1214, 1888, 2324, 2618
Tsp45I	GTSAC	7 cut(s)	49, 212, 527, 1214, 1888, 2324, 2618
TspDTI	ATGAA	5 cut(s)	1004, 1464, 2018, 2029, 2466
TspGWI	ACGGA	4 cut(s)	1125, 1643, 2035, 2782
TspRI	CASTG	7 cut(s)	54, 1358, 2166, 2227, 2284, 2812, 2859
Tth111I	GACNNNGTC	2 cut(s)	1952, 2754
Van91I	CCANNNNNTGG	1 cut(s)	1763
Vha464I	CTTAAG	3 cut(s)	443, 758, 1873
VneI	GTGCAC	1 cut(s)	1479
VpaK11BI	GGWCC	2 cut(s)	1294, 2022
VspI	ATTAAT	1 cut(s)	804
XapI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XhoI	CTCGAG	3 cut(s)	194, 269, 1650
XmiI	GTMKAC	1 cut(s)	250
XmnI	GAANNNNTTC	2 cut(s)	1696, 2245
XspI	CTAG	7 cut(s)	42, 525, 648, 1337, 2199, 2676, 2882
Zsp2I	ATGCAT	3 cut(s)	1261, 1593, 2098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.