Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

3014049 .. 3022055

Gene Structure 8007 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1043500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGGAGAAAAAGCTATGGAAGTCCACTCCTCGGCGACCACTCCAAGACCTTCAATGACGTTTGGCTCGTCGCTAATTCCGATGATCAACAAGCTCCAGGACATTCTCGCGCCGGTGGGCAGCGATAGGCCGCAGATTTCGCTGCCTCAAGTGGCGGTCGTGGGAAGCCAGAGCAGCGGGAAATCGAGCGTCCTCGAAGCCCTCGTTGGCCGCGACTTCCTCCCCCGCGGCCGTGACATCTGCACTCGGCGGCCGCTCGTGCTGATGCTCGAGAATCGCGCGGCGGTGCCCGGTGATGAACACACCGAATGGGGCGAGTTCCGCCACTTGCCCGGAAAACGCTTCTACGACTTCTCCGCAATCCGCCACGAAATTCAGGCGGAGACGGATAGGGAGGCCGGATTGAACAAAAGGGTTTCGGATAAGCAAATCCGGCTGAAGATTATCTCTCCGAATGTGCTTAATATGACTCTGGTTGATTTGCCTGGAATCACGAAAGTTCCGGTGGGAGATCAACCAAGAGACATAGAAGCAATGGTTAGGAAGATGATTATGGGCTATATTATCCAGCAAAACTGTATTATATTAGCGGTTAGTCCTGCGAATTCGGATTTGGCAACCTCCGATGCACTACAGATGGCTAGAGAAGCTGACGCGACTGGTTTTCGAACAATCGGTGTGATCACCAAGCTTGATATAATGGACAGGGGCACCGATGCTCTTGACTTTTTGCTTGGGAAAATTATTCCGCTGCAGCTCGGTTATGTTGGTGTTGTGAATCGTAGCCAGGAGGACATCAATAGAAACTGTGGGATTGCTGCTGCCCTTGCTTACGAGGAGAAATTCTTCAATAGGCACCTTGTATATAGTAAACTCTTGGATCATTGCGGCATGCCCCAGTTAGCAAGGAAGTTGAATCAGATTCTGGAGCAGCATATCAGAAGGGTTCTCCCTGATTTGAAGGCTCGGTTGAATTCTCAAATGGTTTCTGTTTTGAAAGAATTGCAAGCATATGGGCTACCTTTAGAATCTAAAATGGATCAGGGAATGATTTTGTTGAACATTTTGACAAAATATTGTGAAGCTTATGCTGCCATGGTGGAGGGAAAAAGTCAGGAGATGTCAACAAAAGAATTGTCAGGAGGAGCCAGGATCCACTACATTCTCCAGTCAATTTTTGTAAAAAGCTTGGAGGGTGTGGACCCCTCCGACGATCTAACTGATGATGATATTCGAACGGCTATTCAAAATGCTTCTGGTGCAAAAAATGCTCTATTTGTGCCTGAGGTCCCATTTGAAATTTTAGTAAGAAGACAAATTGCTCGATTGCTAGACCCAAGCTGTCAGTGTCTGCGTTTTGTTTACGATGAACTAGTTAAGATAAGCCACGATTGCGCGGTTATTGAGTTGCAAAGGTTTCCAGTTTTGAGAAAGCATATGGATGAAATCATGATCAACTTTTTGCGGGAAGGTGTAAAGCCTGCTCAGAGAATGATAGAAAATCTTATTGAGATGGAGGTGGATTGTATAAACACATCGCATCCATGTTTTATAGGTGGGAAGAAAGCTTCTGAGCTTGCTATGCAAGAGTTGAAAGCACAACAGGGAAGTCGTCCTCAGCTGAATAAAGAGAATCCTGTATCTTCTGGTTCTACGAAGACTTGGGGTATTCCATCTGTATTTGGGAATAGGACATCAGCTGCACAGTCTGGTACACCTTTTGGTGAACAACGTCATTCAGAGTCAATGCCCTCCACAATCAATTTGAGAGAGCCACCATCCATCTTAAGGCCAGTTGAAACGACAGAAAATGAAGCAGCGGAAATTATTGTAACCAAATCACTGTTGAAATCCTATTATGACATTGTCAGAAAGAACATTCAAGACCTAGTTCCAAAAGCTATAATGCACTTTCTGGTCAACTCTACGATAAAAAACCTTCAAACGGGCTTTATTCAAAAACTGTACAGAGAGAACCTGTTTGAAGAACTGCTGAAGGAGCATGATGAACTTGATTCAAAAAGAAAATGTGACCAAAAGTTGTACGAGGTTTTGAAGCAATCCCTTCAGACACTCGAGAAGGTCGAATTTGATGTTTCAACCCAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

704

Amino Acids

78.82

Weight (kDa)

6.57

Isoelectric Point (pI)

50.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 231	4.3e-54	Dynamin family
Dynamin_M	PF01031	239 - 524	3.7e-99	Dynamin central region
GED	PF02212	605 - 695	3.8e-24	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	286, 710, 855
AccBSI	CCGCTC	1 cut(s)	256
AccII	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
AclWI	GGATC	4 cut(s)	888, 1047, 1147, 1160
AcoI	YGGCCR	3 cut(s)	208, 229, 251
AcsI	RAATTY	6 cut(s)	372, 604, 842, 973, 1299, 2087
AcuI	CTGAAG	3 cut(s)	458, 2015, 2051
AfaI	GTAC	3 cut(s)	1714, 1967, 2045
AfiI	CCNNNNNNNGG	3 cut(s)	31, 1788, 1945
AflII	CTTAAG	1 cut(s)	1786
AhlI	ACTAGT	1 cut(s)	1372
AjnI	CCWGG	4 cut(s)	96, 484, 786, 1148
AjuI	GAANNNNNNNTTGG	4 cut(s)	189, 221, 596, 628
Alw26I	GTCTC	2 cut(s)	377, 516
AlwI	GGATC	4 cut(s)	888, 1047, 1147, 1160
AlwNI	CAGNNNCTG	2 cut(s)	925, 1351
Ama87I	CYCGRG	2 cut(s)	269, 2075
AoxI	GGCC	6 cut(s)	128, 208, 229, 251, 396, 1790
ApoI	RAATTY	6 cut(s)	372, 604, 842, 973, 1299, 2087
ArsI	GACNNNNNNTTYG	2 cut(s)	1121, 1153
Asp700I	GAANNNNTTC	1 cut(s)	845
AspLEI	GCGC	3 cut(s)	112, 281, 1397
AspS9I	GGNCC	2 cut(s)	1201, 1288
AsuC2I	CCSGG	2 cut(s)	291, 333
AsuHPI	GGTGA	3 cut(s)	305, 676, 1736
AsuII	TTCGAA	2 cut(s)	667, 1234
AvaI	CYCGRG	2 cut(s)	269, 2075
AvaII	GGWCC	2 cut(s)	1201, 1288
AxyI	CCTNAGG	1 cut(s)	1284
BaeGI	GKGCMC	2 cut(s)	291, 713
BamHI	GGATCC	1 cut(s)	1152
BanI	GGYRCC	3 cut(s)	286, 710, 855
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	2 cut(s)	1318, 1664
BbvCI	CCTCAGC	1 cut(s)	1617
BccI	CCATC	5 cut(s)	631, 1507, 1681, 1786, 1790
BceAI	ACGGC	2 cut(s)	216, 1254
BciT130I	CCWGG	4 cut(s)	98, 486, 788, 1150
BclI	TGATCA	3 cut(s)	84, 681, 1452
BcnI	CCSGG	2 cut(s)	291, 333
BcoDI	GTCTC	2 cut(s)	377, 516
BcuI	ACTAGT	1 cut(s)	1372
BfaI	CTAG	4 cut(s)	642, 1331, 1373, 1889
BfmI	CTRYAG	2 cut(s)	632, 752
BfrI	CTTAAG	1 cut(s)	1786
Bme1390I	CCNGG	6 cut(s)	98, 291, 333, 486, 788, 1150
Bme18I	GGWCC	2 cut(s)	1201, 1288
BmeT110I	CYCGRG	2 cut(s)	269, 2075
BmgT120I	GGNCC	2 cut(s)	1201, 1288
BmiI	GGNNCC	7 cut(s)	288, 712, 857, 1147, 1154, 1203, 1290
BmrFI	CCNGG	6 cut(s)	98, 291, 333, 486, 788, 1150
BmrI	ACTGGG	1 cut(s)	892
BmsI	GCATC	4 cut(s)	255, 616, 706, 1549
BmuI	ACTGGG	1 cut(s)	892
BpiI	GAAGAC	2 cut(s)	1318, 1664
BpmI	CTGGAG	3 cut(s)	80, 947, 1151
Bpu10I	CCTNAGC	1 cut(s)	1617
Bpu14I	TTCGAA	2 cut(s)	667, 1234
BpuEI	CTTGAG	1 cut(s)	132
BpuMI	CCSGG	2 cut(s)	291, 333
BsaJI	CCNNGG	3 cut(s)	30, 226, 1095
BsaWI	WCCGGW	1 cut(s)	502
BsaXI	ACNNNNNCTCC	2 cut(s)	338, 368
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 1788, 1945
Bse118I	RCCGGY	1 cut(s)	112
Bse1I	ACTGG	5 cut(s)	664, 898, 1168, 1421, 1793
Bse21I	CCTNAGG	1 cut(s)	1284
Bse3DI	GCAATG	2 cut(s)	540, 883
BseBI	CCWGG	4 cut(s)	98, 486, 788, 1150
BseDI	CCNNGG	3 cut(s)	30, 226, 1095
BseGI	GGATG	3 cut(s)	1447, 1540, 1778
BseLI	CCNNNNNNNGG	3 cut(s)	31, 1788, 1945
BseMI	GCAATG	2 cut(s)	540, 883
BseMII	CTCAG	4 cut(s)	1275, 1499, 1563, 1631
BseNI	ACTGG	5 cut(s)	664, 898, 1168, 1421, 1793
BseRI	GAGGAG	3 cut(s)	19, 851, 1158
BseSI	GKGCMC	2 cut(s)	291, 713
BseX3I	CGGCCG	2 cut(s)	229, 251
BsgI	GTGCAG	2 cut(s)	226, 1686
Bsh1236I	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
Bsh1285I	CGRYCG	3 cut(s)	159, 232, 254
BshFI	GGCC	6 cut(s)	130, 210, 231, 253, 398, 1792
BshNI	GGYRCC	3 cut(s)	286, 710, 855
BsiEI	CGRYCG	3 cut(s)	159, 232, 254
BsiHKCI	CYCGRG	2 cut(s)	269, 2075
BsiSI	CCGG	6 cut(s)	113, 291, 333, 399, 433, 503
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	3 cut(s)	31, 1788, 1945
BsmAI	GTCTC	2 cut(s)	377, 516
BsmBI	CGTCTC	1 cut(s)	377
BsmFI	GGGAC	1 cut(s)	1274
BsnI	GGCC	6 cut(s)	130, 210, 231, 253, 398, 1792
BsoBI	CYCGRG	2 cut(s)	269, 2075
Bsp119I	TTCGAA	2 cut(s)	667, 1234
Bsp1286I	GDGCHC	2 cut(s)	291, 713
Bsp1407I	TGTACA	1 cut(s)	1965
Bsp143I	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
Bsp19I	CCATGG	1 cut(s)	1095
BspANI	GGCC	6 cut(s)	130, 210, 231, 253, 398, 1792
BspCNI	CTCAG	4 cut(s)	1276, 1498, 1564, 1630
BspFNI	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
BspHI	TCATGA	1 cut(s)	1449
BspLI	GGNNCC	7 cut(s)	288, 712, 857, 1147, 1154, 1203, 1290
BspMAI	CTGCAG	1 cut(s)	756
BspPI	GGATC	4 cut(s)	888, 1047, 1147, 1160
BspT104I	TTCGAA	2 cut(s)	667, 1234
BspT107I	GGYRCC	3 cut(s)	286, 710, 855
BspTI	CTTAAG	1 cut(s)	1786
BsrBI	CCGCTC	1 cut(s)	256
BsrDI	GCAATG	2 cut(s)	540, 883
BsrFI	RCCGGY	1 cut(s)	112
BsrGI	TGTACA	1 cut(s)	1965
BsrI	ACTGG	5 cut(s)	664, 898, 1168, 1421, 1793
BssAI	RCCGGY	1 cut(s)	112
BssECI	CCNNGG	3 cut(s)	30, 226, 1095
BssMI	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	1 cut(s)	1095
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	4 cut(s)	98, 486, 788, 1150
Bst4CI	ACNGT	5 cut(s)	578, 809, 1707, 1845, 1965
BstAFI	CTTAAG	1 cut(s)	1786
BstAPI	GCANNNNNTGC	1 cut(s)	1268
BstAUI	TGTACA	1 cut(s)	1965
BstBI	TTCGAA	2 cut(s)	667, 1234
BstC8I	GCNNGC	4 cut(s)	893, 1008, 1482, 1578
BstDEI	CTNAG	4 cut(s)	1284, 1485, 1572, 1617
BstDSI	CCRYGG	2 cut(s)	226, 1095
BstF5I	GGATG	3 cut(s)	1447, 1540, 1778
BstFNI	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
BstHHI	GCGC	3 cut(s)	112, 281, 1397
BstKTI	GATC	8 cut(s)	87, 514, 684, 883, 1042, 1155, 1216, 1455
BstMAI	GTCTC	2 cut(s)	377, 516
BstMBI	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
BstMCI	CGRYCG	3 cut(s)	159, 232, 254
BstNI	CCWGG	4 cut(s)	98, 486, 788, 1150
BstNSI	RCATGY	1 cut(s)	895
BstSCI	CCNGG	6 cut(s)	96, 289, 331, 484, 786, 1148
BstSFI	CTRYAG	2 cut(s)	632, 752
BstSLI	GKGCMC	2 cut(s)	291, 713
BstUI	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
BstV2I	GAAGAC	2 cut(s)	1318, 1664
BstX2I	RGATCY	1 cut(s)	1152
BstYI	RGATCY	1 cut(s)	1152
BstZI	CGGCCG	2 cut(s)	229, 251
Bsu36I	CCTNAGG	1 cut(s)	1284
BsuRI	GGCC	6 cut(s)	130, 210, 231, 253, 398, 1792
BtgI	CCRYGG	2 cut(s)	226, 1095
BtgZI	GCGATG	1 cut(s)	1521
BtsCI	GGATG	3 cut(s)	1447, 1540, 1778
BtsIMutI	CAGTG	2 cut(s)	1352, 1841
Cac8I	GCNNGC	4 cut(s)	893, 1008, 1482, 1578
CaiI	CAGNNNCTG	2 cut(s)	925, 1351
CciI	TCATGA	1 cut(s)	1449
CciNI	GCGGCCGC	1 cut(s)	251
CfoI	GCGC	3 cut(s)	112, 281, 1397
Cfr10I	RCCGGY	1 cut(s)	112
Cfr13I	GGNCC	2 cut(s)	1201, 1288
Cfr42I	CCGCGG	1 cut(s)	229
CseI	GACGC	2 cut(s)	178, 662
Csp6I	GTAC	3 cut(s)	1713, 1966, 2044
CviAII	CATG	5 cut(s)	892, 1096, 1450, 1545, 2003
CviQI	GTAC	3 cut(s)	1713, 1966, 2044
DdeI	CTNAG	4 cut(s)	1284, 1485, 1572, 1617
DpnI	GATC	8 cut(s)	86, 513, 683, 882, 1041, 1154, 1215, 1454
DpnII	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
EaeI	YGGCCR	3 cut(s)	208, 229, 251
EagI	CGGCCG	2 cut(s)	229, 251
EciI	GGCGGA	3 cut(s)	311, 353, 395
EclXI	CGGCCG	2 cut(s)	229, 251
Eco130I	CCWWGG	1 cut(s)	1095
Eco47I	GGWCC	2 cut(s)	1201, 1288
Eco52I	CGGCCG	2 cut(s)	229, 251
Eco57I	CTGAAG	3 cut(s)	458, 2015, 2051
Eco81I	CCTNAGG	1 cut(s)	1284
Eco88I	CYCGRG	2 cut(s)	269, 2075
EcoO109I	RGGNCCY	1 cut(s)	1288
EcoRI	GAATTC	2 cut(s)	604, 973
EcoRII	CCWGG	4 cut(s)	96, 484, 786, 1148
EcoT14I	CCWWGG	1 cut(s)	1095
ErhI	CCWWGG	1 cut(s)	1095
Esp3I	CGTCTC	1 cut(s)	377
FaeI	CATG	5 cut(s)	895, 1099, 1453, 1548, 2006
FaqI	GGGAC	1 cut(s)	1274
FatI	CATG	5 cut(s)	891, 1095, 1449, 1544, 2002
FauI	CCCGC	3 cut(s)	170, 233, 1458
FauNDI	CATATG	2 cut(s)	1012, 1437
FbaI	TGATCA	3 cut(s)	84, 681, 1452
FokI	GGATG	3 cut(s)	1454, 1527, 1765
FspBI	CTAG	4 cut(s)	642, 1331, 1373, 1889
GlaI	GCGC	3 cut(s)	111, 280, 1396
GsuI	CTGGAG	3 cut(s)	80, 947, 1151
HaeIII	GGCC	6 cut(s)	130, 210, 231, 253, 398, 1792
HapII	CCGG	6 cut(s)	113, 291, 333, 399, 433, 503
HgaI	GACGC	2 cut(s)	178, 662
HhaI	GCGC	3 cut(s)	112, 281, 1397
Hin1II	CATG	5 cut(s)	895, 1099, 1453, 1548, 2006
Hin6I	GCGC	3 cut(s)	110, 279, 1395
HinP1I	GCGC	3 cut(s)	110, 279, 1395
HincII	GTYRAC	2 cut(s)	1125, 1921
HindII	GTYRAC	2 cut(s)	1125, 1921
HindIII	AAGCTT	4 cut(s)	689, 1083, 1186, 1566
HpaII	CCGG	6 cut(s)	113, 291, 333, 399, 433, 503
HphI	GGTGA	3 cut(s)	305, 676, 1736
Hpy166II	GTNNAC	8 cut(s)	25, 872, 1125, 1201, 1363, 1715, 1727, 1921
Hpy188III	TCNNGA	9 cut(s)	271, 493, 722, 926, 1115, 1140, 1450, 1883, 2077
Hpy8I	GTNNAC	8 cut(s)	25, 872, 1125, 1201, 1363, 1715, 1727, 1921
Hpy99I	CGWCG	2 cut(s)	73, 1214
HpyAV	CCTTC	8 cut(s)	60, 936, 955, 1463, 1949, 1990, 2074, 2075
HpyCH4III	ACNGT	5 cut(s)	578, 809, 1707, 1845, 1965
HpyCH4IV	ACGT	2 cut(s)	59, 1732
HpyCH4V	TGCA	9 cut(s)	243, 629, 754, 1006, 1262, 1411, 1585, 1703, 1909
HpyF3I	CTNAG	4 cut(s)	1284, 1485, 1572, 1617
HpySE526I	ACGT	2 cut(s)	59, 1732
Hsp92II	CATG	5 cut(s)	895, 1099, 1453, 1548, 2006
HspAI	GCGC	3 cut(s)	110, 279, 1395
Ksp22I	TGATCA	3 cut(s)	84, 681, 1452
KspI	CCGCGG	1 cut(s)	229
Kzo9I	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
LmnI	GCTCC	4 cut(s)	99, 928, 1145, 1999
LweI	GCATC	4 cut(s)	255, 616, 706, 1549
MaeI	CTAG	4 cut(s)	642, 1331, 1373, 1889
MaeII	ACGT	2 cut(s)	59, 1732
MaeIII	GTNAC	3 cut(s)	233, 1831, 2030
MalI	GATC	8 cut(s)	86, 513, 683, 882, 1041, 1154, 1215, 1454
MbiI	CCGCTC	1 cut(s)	256
MboI	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
MboII	GAAGA	8 cut(s)	451, 556, 838, 1323, 1573, 1635, 1669, 1997
MflI	RGATCY	1 cut(s)	1152
MhlI	GDGCHC	2 cut(s)	291, 713
MlyI	GAGTC	2 cut(s)	463, 1751
MmeI	TCCRAC	1 cut(s)	1233
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	4 cut(s)	462, 1377, 1787, 2110
MslI	CAYNNNNRTG	1 cut(s)	1440
MspA1I	CMGCKG	6 cut(s)	177, 228, 751, 1621, 1700, 1820
MspCI	CTTAAG	1 cut(s)	1786
MspI	CCGG	6 cut(s)	113, 291, 333, 399, 433, 503
MspR9I	CCNGG	6 cut(s)	98, 291, 333, 486, 788, 1150
MvaI	CCWGG	4 cut(s)	98, 486, 788, 1150
MvnI	CGCG	7 cut(s)	110, 213, 228, 279, 281, 656, 1397
NciI	CCSGG	2 cut(s)	291, 333
NcoI	CCATGG	1 cut(s)	1095
NdeI	CATATG	2 cut(s)	1012, 1437
NdeII	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
NlaIII	CATG	5 cut(s)	895, 1099, 1453, 1548, 2006
NlaIV	GGNNCC	7 cut(s)	288, 712, 857, 1147, 1154, 1203, 1290
NmeAIII	GCCGAG	2 cut(s)	11, 226
NmuCI	GTSAC	2 cut(s)	233, 2030
NotI	GCGGCCGC	1 cut(s)	251
NspI	RCATGY	1 cut(s)	895
NspV	TTCGAA	2 cut(s)	667, 1234
PaeI	GCATGC	1 cut(s)	895
PaeR7I	CTCGAG	2 cut(s)	269, 2075
PagI	TCATGA	1 cut(s)	1449
PcsI	WCGNNNNNNNCGW	5 cut(s)	65, 77, 201, 210, 2082
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	8 cut(s)	274, 489, 778, 916, 922, 1028, 1633, 2015
PflFI	GACNNNGTC	1 cut(s)	1865
PfoI	TCCNGGA	1 cut(s)	96
PleI	GAGTC	2 cut(s)	463, 1750
PpsI	GAGTC	2 cut(s)	463, 1750
PpuMI	RGGWCCY	1 cut(s)	1288
Psp5II	RGGWCCY	1 cut(s)	1288
Psp6I	CCWGG	4 cut(s)	96, 484, 786, 1148
PspGI	CCWGG	4 cut(s)	96, 484, 786, 1148
PspN4I	GGNNCC	7 cut(s)	288, 712, 857, 1147, 1154, 1203, 1290
PspPI	GGNCC	2 cut(s)	1201, 1288
PspPPI	RGGWCCY	1 cut(s)	1288
PstI	CTGCAG	1 cut(s)	756
PstNI	CAGNNNCTG	2 cut(s)	925, 1351
PsuI	RGATCY	1 cut(s)	1152
PsyI	GACNNNGTC	1 cut(s)	1865
PvuII	CAGCTG	2 cut(s)	1621, 1700
RsaI	GTAC	3 cut(s)	1714, 1967, 2045
RsaNI	GTAC	3 cut(s)	1713, 1966, 2044
RseI	CAYNNNNRTG	1 cut(s)	1440
SacII	CCGCGG	1 cut(s)	229
SaqAI	TTAA	4 cut(s)	462, 1377, 1787, 2110
Sau3AI	GATC	8 cut(s)	84, 511, 681, 880, 1039, 1152, 1213, 1452
Sau96I	GGNCC	2 cut(s)	1201, 1288
SchI	GAGTC	2 cut(s)	463, 1751
ScrFI	CCNGG	6 cut(s)	98, 291, 333, 486, 788, 1150
SduI	GDGCHC	2 cut(s)	291, 713
SfaNI	GCATC	4 cut(s)	255, 616, 706, 1549
SfcI	CTRYAG	2 cut(s)	632, 752
Sfr274I	CTCGAG	2 cut(s)	269, 2075
Sfr303I	CCGCGG	1 cut(s)	229
SfuI	TTCGAA	2 cut(s)	667, 1234
SgrAI	CRCCGGYG	1 cut(s)	112
SgrBI	CCGCGG	1 cut(s)	229
SinI	GGWCC	2 cut(s)	1201, 1288
SlaI	CTCGAG	2 cut(s)	269, 2075
SmiMI	CAYNNNNRTG	1 cut(s)	1440
SmlI	CTYRAG	4 cut(s)	147, 269, 1786, 2075
SmoI	CTYRAG	4 cut(s)	147, 269, 1786, 2075
SpeI	ACTAGT	1 cut(s)	1372
SphI	GCATGC	1 cut(s)	895
SspI	AATATT	1 cut(s)	1076
SspMI	CTAG	4 cut(s)	642, 1331, 1373, 1889
StyD4I	CCNGG	6 cut(s)	96, 289, 331, 484, 786, 1148
StyI	CCWWGG	1 cut(s)	1095
TaaI	ACNGT	5 cut(s)	578, 809, 1707, 1845, 1965
TaiI	ACGT	2 cut(s)	62, 1735
TaqI	TCGA	8 cut(s)	185, 195, 270, 667, 1234, 1324, 2076, 2085
TatI	WGTACW	1 cut(s)	1965
TauI	GCSGC	7 cut(s)	133, 213, 231, 253, 256, 284, 891
TfiI	GAWTC	8 cut(s)	274, 489, 778, 916, 922, 1028, 1633, 2015
Tru1I	TTAA	4 cut(s)	462, 1377, 1787, 2110
Tru9I	TTAA	4 cut(s)	462, 1377, 1787, 2110
TscAI	CASTG	2 cut(s)	1352, 1848
TseFI	GTSAC	2 cut(s)	233, 2030
Tsp45I	GTSAC	2 cut(s)	233, 2030
TspDTI	ATGAA	5 cut(s)	312, 1383, 1458, 1827, 2022
TspGWI	ACGGA	1 cut(s)	401
TspRI	CASTG	2 cut(s)	1352, 1848
Tth111I	GACNNNGTC	1 cut(s)	1865
Vha464I	CTTAAG	1 cut(s)	1786
VpaK11BI	GGWCC	2 cut(s)	1201, 1288
XapI	RAATTY	6 cut(s)	372, 604, 842, 973, 1299, 2087
XceI	RCATGY	1 cut(s)	895
XhoI	CTCGAG	2 cut(s)	269, 2075
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	4 cut(s)	642, 1331, 1373, 1889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.