Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Reverse (-)

59405821 .. 59413393

Gene Structure 7573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G034750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGGGCGAGGCAGGGGACTCTTTTCCTACGAAGCCGACGACTAGTTCAGTGACGATCGGCTCGTCGCTGATTCCGATAATCAACAAGCTGCAGGACATTCTGGCTCCCGTAGCCTCAGGCAGCGAATTGTCCAAGATTTCGCTGCCGCAAGTTGCCGTCGTGGGAAGCCAAAGCAGCGGTAAATCCAGCGTCCTCGAGGCCCTCGTCGGCCGTGACTTCCTCCCTCGCGGCTGCGATATTTGCACTCGTAGACCTCTCGTCTTGATGCTCGAGAATCGCCCGCCCAATCCCGCCCAAGATGCCGCCCTAACCGAGTGGGGCGAGTTTCGGCATTTGCCTGGAAAGCGCTTCTACGACTTCACCAGCATTCGCCGAGAGATTCAGGCTGAGACTGAAAGAGAGGCAGGATTGAACAAAGGAGTTTCGGGTAAACAAATTCGGCTTAAGATTACCTCTCCGAATGTCCTTAATATGACTCTTGTTGATTTGCCTGGCATGACTAAGGTTCCTGTGGGAGATCAACCTAGTGACATAGAATCTAGGATCAGGAAGATGATAATGGGACATATTAGGCAAGAAAATTGCATTATATTGGCAGTTACTCCTGCCAACGCTGATTTAGCCACCTCTGATGCACTGCAACTCGCTAGAGAAGCTGACCCTACCGGTTTTCGTACCATTGGTGTCATCACCAAGCTGGATATAATGGACAGGGGCACCGATGCCAGTAAATTTTTGCTCGGGAAAGTTGTTCCCCTTAAGCTTGGTTATGTTGGTGTTGTCAACCGTTGTCAGGAGGACATTAATAACAACCGTAGCATTGCTGCAGCACTTGCTTATGAGGATAAATTCTTCCGCAATAATCCAGTATATAGCAGTCTCTCTGATAGTTGCGGCATTCCCCAGTTAGCAAGGAAACTGAATCAGATTCTGGAGCACCATATCAGGATTGTTCTCCCTGGTTTGAAGGCTGAGTTGAATTCTCAGATGAATGCTATCTATAAGGAACTACAAACATATGGAAAAGTTATGGAATCCAAAACAGATCTGGGAGCAACTTTGTTGAACATTTTGTCAAAATACTGTGAAGCTTTTACTGCCATGTTGGATGGAAAAAATCCAGAGATGTTAACTAAAGAATTGTCAGGAGGAGCCAGGATCCAGTACATTTTCCAGTCAATTTTTGTAAAGAGCTTGCAGGAAGTAGATCCCTGTGACGATGTAACTGATAATGATATTCGAACCGCCATTCAAAATGCATCTGGTGCAAGAGATGCTTTGTTTGTGCCCGAGGTCCCATTTGAAGTTTTAGTTAAAAGAGAGATTGCACGCTTGCTAGAGCCAAGCCTTCAGTGTCTTCGTTTTGTTTATGAGGAACTGGTTAAGATTAGCCGCACTTGTGAGGTTACTGAGTTGCAAAGGTTTCCAGTATTGAGAATGCGTTTGGATGAAGTCATGGTAAACTTTTTGCGTGATGGTGCACAGCCTGCTGAGAGAATGATAGAAAATCTTATTGAGATGGAGGCAGATTATATAAACACTTCGCACCCAAATTTTTTAGGTGGGAACAGAGCTGCTGAGATTGCTTTGCATGAGTTGAAATCACCACAGATATCTCTGGGCGTAACGGATGCTGAAGCCCAAACTTCTCGAGTGGCTTCGGCAAAGAATGGACAATTACCAAATCAGTATTCAGATGGCCTGACTTCTTTGAAGGGTGCCTTACAGGGAAGTCCTTCACAGCTGAATAGCAATAAACCTGTATCTGGAGGTTCCACAAAGACTTGGCTTCCATTTTTTGGGAATCGGACATCATCTGAAGGCTCCCCGGATAGCAGATCTTTTGGTGAACAAAACCATTCACAATCGATGCCCTCTGTAATCCAATTGAGAGAGCCCCCATCCATCTTAAGGCCAATTGAAGTGACAGAGCATAAAGCAGTGGAAATTGTCATAACCAAATTACTCTTACGGTCATATTATGACATTGTCAGAAAAAACATTCAAGATCTTGTTCCAAAAGCAATTATGCACTTTCTGGTCAATCTTACAAAACGGACCCTTCATCGAACCTTCATTCAAAAGTTCTACAGAGAGAACCTGTTTGAAGAACTGTTGCAGGAGCAGGATGCATTTGTATTGAAAAGAAAACATATCCAAGAAATGCTCCCAGTTTTGGAACAATCTTTGCAGACACTGGAGAAAGTTGAATTTGATGTCTCATGCCGTACTTCTAGTTTTGGAACTGATGCTTCCACTGAAGTTCCAAGAATTACAAGGATTTCACCACCCCATCAACAATACTCAACAACCAGTGGTGAGATGAGTCAATCTAGATACCATTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

782

Amino Acids

86.97

Weight (kDa)

6.71

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 233	2.6e-52	Dynamin family
Dynamin_M	PF01031	241 - 526	6.6e-104	Dynamin central region
GED	PF02212	647 - 736	2.8e-23	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	194
AccB1I	GGYRCC	2 cut(s)	716, 1718
AccB7I	CCANNNNNTGG	1 cut(s)	1799
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	1 cut(s)	228
AclWI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AcoI	YGGCCR	1 cut(s)	208
AcsI	RAATTY	6 cut(s)	435, 731, 848, 979, 1552, 2210
AcuI	CTGAAG	4 cut(s)	1334, 1656, 1839, 2280
AfaI	GTAC	3 cut(s)	676, 1166, 2230
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	5 cut(s)	793, 1766, 1799, 1911, 2176
AflII	CTTAAG	3 cut(s)	443, 758, 1909
AgeI	ACCGGT	1 cut(s)	665
AhdI	GACNNNNNGTC	1 cut(s)	257
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	4 cut(s)	337, 490, 958, 1154
AjuI	GAANNNNNNNTTGG	2 cut(s)	1675, 1707
AluBI	AGCT	8 cut(s)	88, 656, 697, 763, 1091, 1194, 1574, 1744
AluI	AGCT	8 cut(s)	88, 656, 697, 763, 1091, 1194, 1574, 1744
Alw21I	GWGCWC	2 cut(s)	939, 1483
Alw26I	GTCTC	3 cut(s)	383, 884, 2224
Alw44I	GTGCAC	1 cut(s)	1479
AlwI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AlwNI	CAGNNNCTG	2 cut(s)	931, 2197
Ama87I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	4 cut(s)	198, 208, 1699, 1913
ApaLI	GTGCAC	1 cut(s)	1479
ApeKI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1574
ApoI	RAATTY	6 cut(s)	435, 731, 848, 979, 1552, 2210
AseI	ATTAAT	1 cut(s)	804
AsiGI	ACCGGT	1 cut(s)	665
Asp700I	GAANNNNTTC	1 cut(s)	1735
AspLEI	GCGC	1 cut(s)	348
AspS9I	GGNCC	3 cut(s)	199, 1294, 2058
AsuC2I	CCSGG	1 cut(s)	1829
AsuHPI	GGTGA	6 cut(s)	352, 682, 1596, 1859, 2277, 2330
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
AvaII	GGWCC	2 cut(s)	1294, 2058
AxyI	CCTNAGG	1 cut(s)	115
BaeGI	GKGCMC	3 cut(s)	719, 1290, 1483
BamHI	GGATCC	1 cut(s)	1158
BanI	GGYRCC	2 cut(s)	716, 1718
BanII	GRGCYC	1 cut(s)	1899
BbsI	GAAGAC	1 cut(s)	1349
Bbv12I	GWGCWC	2 cut(s)	939, 1483
BbvI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
BccI	CCATC	7 cut(s)	1103, 1469, 1513, 1691, 1909, 1913, 2301
BceAI	ACGGC	3 cut(s)	140, 195, 2211
BciT130I	CCWGG	4 cut(s)	339, 492, 960, 1156
BcnI	CCSGG	1 cut(s)	1829
BcoDI	GTCTC	3 cut(s)	383, 884, 2224
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	7 cut(s)	42, 525, 540, 648, 1337, 2235, 2334
BfmI	CTRYAG	3 cut(s)	89, 825, 2089
BfoI	RGCGCY	1 cut(s)	349
BfrI	CTTAAG	3 cut(s)	443, 758, 1909
BglII	AGATCT	3 cut(s)	1045, 1838, 2008
Bme1390I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1829
Bme18I	GGWCC	2 cut(s)	1294, 2058
BmeRI	GACNNNNNGTC	1 cut(s)	257
BmeT110I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BmgT120I	GGNCC	3 cut(s)	199, 1294, 2058
BmrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1829
BmrI	ACTGGG	2 cut(s)	898, 2165
BmuI	ACTGGG	2 cut(s)	898, 2165
BpiI	GAAGAC	1 cut(s)	1349
BpmI	CTGGAG	3 cut(s)	953, 1788, 2219
Bpu14I	TTCGAA	1 cut(s)	1240
BpuMI	CCSGG	1 cut(s)	1829
Bsa29I	ATCGAT	1 cut(s)	1868
BsaJI	CCNNGG	3 cut(s)	958, 1290, 1827
BsaWI	WCCGGW	1 cut(s)	665
Bsc4I	CCNNNNNNNGG	5 cut(s)	793, 1766, 1799, 1911, 2176
Bse118I	RCCGGY	1 cut(s)	665
Bse21I	CCTNAGG	1 cut(s)	115
Bse3DI	GCAATG	1 cut(s)	819
BseBI	CCWGG	4 cut(s)	339, 492, 960, 1156
BseCI	ATCGAT	1 cut(s)	1868
BseDI	CCNNGG	3 cut(s)	958, 1290, 1827
BseGI	GGATG	5 cut(s)	1114, 1453, 1636, 1901, 2134
BseLI	CCNNNNNNNGG	5 cut(s)	793, 1766, 1799, 1911, 2176
BseMI	GCAATG	1 cut(s)	819
BseMII	CTCAG	7 cut(s)	129, 378, 963, 998, 1401, 1482, 1569
BseRI	GAGGAG	1 cut(s)	1164
BseSI	GKGCMC	3 cut(s)	719, 1290, 1483
BseX3I	CGGCCG	1 cut(s)	208
BseXI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
Bsh1236I	CGCG	1 cut(s)	228
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	4 cut(s)	200, 210, 1701, 1915
BshNI	GGYRCC	2 cut(s)	716, 1718
BshTI	ACCGGT	1 cut(s)	665
BshVI	ATCGAT	1 cut(s)	1868
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	2 cut(s)	939, 1483
BsiHKCI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BsiSI	CCGG	2 cut(s)	666, 1829
BslFI	GGGAC	3 cut(s)	29, 576, 1280
BslI	CCNNNNNNNGG	5 cut(s)	793, 1766, 1799, 1911, 2176
BsmAI	GTCTC	3 cut(s)	383, 884, 2224
BsmFI	GGGAC	3 cut(s)	29, 576, 1280
BsmI	GAATGC	4 cut(s)	366, 897, 997, 1443
BsnI	GGCC	4 cut(s)	200, 210, 1701, 1915
BsoBI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1899
Bsp143I	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
BspANI	GGCC	4 cut(s)	200, 210, 1701, 1915
BspCNI	CTCAG	7 cut(s)	128, 379, 964, 997, 1402, 1483, 1570
BspDI	ATCGAT	1 cut(s)	1868
BspFNI	CGCG	1 cut(s)	228
BspMAI	CTGCAG	2 cut(s)	93, 829
BspPI	GGATC	4 cut(s)	551, 1153, 1166, 1202
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	2 cut(s)	716, 1718
BspTI	CTTAAG	3 cut(s)	443, 758, 1909
BsrDI	GCAATG	1 cut(s)	819
BsrFI	RCCGGY	1 cut(s)	665
BssAI	RCCGGY	1 cut(s)	665
BssECI	CCNNGG	3 cut(s)	958, 1290, 1827
BssMI	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
Bst2UI	CCWGG	4 cut(s)	339, 492, 960, 1156
Bst4CI	ACNGT	5 cut(s)	788, 815, 1085, 1974, 2115
BstAFI	CTTAAG	3 cut(s)	443, 758, 1909
BstAPI	GCANNNNNTGC	4 cut(s)	833, 1265, 1274, 1487
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	5 cut(s)	281, 1196, 1330, 1334, 1488
BstDEI	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
BstF5I	GGATG	5 cut(s)	1114, 1453, 1636, 1901, 2134
BstFNI	CGCG	1 cut(s)	228
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	1 cut(s)	348
BstKTI	GATC	8 cut(s)	57, 520, 546, 1048, 1161, 1210, 1841, 2011
BstMAI	GTCTC	3 cut(s)	383, 884, 2224
BstMBI	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	4 cut(s)	339, 492, 960, 1156
BstSCI	CCNGG	5 cut(s)	337, 490, 958, 1154, 1827
BstSFI	CTRYAG	3 cut(s)	89, 825, 2089
BstSLI	GKGCMC	3 cut(s)	719, 1290, 1483
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
BstV2I	GAAGAC	1 cut(s)	1349
BstX2I	RGATCY	5 cut(s)	1045, 1158, 1207, 1838, 2008
BstYI	RGATCY	5 cut(s)	1045, 1158, 1207, 1838, 2008
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	1868
Bsu36I	CCTNAGG	1 cut(s)	115
BsuRI	GGCC	4 cut(s)	200, 210, 1701, 1915
BsuTUI	ATCGAT	1 cut(s)	1868
BtsCI	GGATG	5 cut(s)	1114, 1453, 1636, 1901, 2134
BtsI	GCAGTG	2 cut(s)	635, 1947
BtsIMutI	CAGTG	7 cut(s)	54, 635, 1358, 1947, 2195, 2256, 2320
Cac8I	GCNNGC	5 cut(s)	281, 1196, 1330, 1334, 1488
CaiI	CAGNNNCTG	2 cut(s)	931, 2197
CfoI	GCGC	1 cut(s)	348
Cfr10I	RCCGGY	1 cut(s)	665
Cfr13I	GGNCC	3 cut(s)	199, 1294, 2058
ClaI	ATCGAT	1 cut(s)	1868
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	675, 1165, 2229
CspAI	ACCGGT	1 cut(s)	665
CviAII	CATG	5 cut(s)	496, 1102, 1456, 1592, 2223
CviQI	GTAC	3 cut(s)	675, 1165, 2229
DdeI	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
DpnI	GATC	8 cut(s)	56, 519, 545, 1047, 1160, 1209, 1840, 2010
DpnII	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
DriI	GACNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	1 cut(s)	208
EagI	CGGCCG	1 cut(s)	208
Eam1105I	GACNNNNNGTC	1 cut(s)	257
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	1 cut(s)	1899
Eco32I	GATATC	1 cut(s)	1614
Eco47I	GGWCC	2 cut(s)	1294, 2058
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco57I	CTGAAG	4 cut(s)	1334, 1656, 1839, 2280
Eco81I	CCTNAGG	1 cut(s)	115
Eco88I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
EcoO109I	RGGNCCY	2 cut(s)	199, 1294
EcoRI	GAATTC	1 cut(s)	979
EcoRII	CCWGG	4 cut(s)	337, 490, 958, 1154
EcoRV	GATATC	1 cut(s)	1614
EcoT22I	ATGCAT	2 cut(s)	1261, 2134
EcoT38I	GRGCYC	1 cut(s)	1899
FaeI	CATG	5 cut(s)	499, 1105, 1459, 1595, 2226
FalI	AAGNNNNNCTT	4 cut(s)	1261, 1293, 1706, 1738
FaqI	GGGAC	3 cut(s)	29, 576, 1280
FatI	CATG	5 cut(s)	495, 1101, 1455, 1591, 2222
FauI	CCCGC	2 cut(s)	288, 298
FauNDI	CATATG	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	5 cut(s)	1121, 1460, 1643, 1888, 2141
FriOI	GRGCYC	1 cut(s)	1899
FspBI	CTAG	7 cut(s)	42, 525, 540, 648, 1337, 2235, 2334
GlaI	GCGC	1 cut(s)	347
GsuI	CTGGAG	3 cut(s)	953, 1788, 2219
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	4 cut(s)	200, 210, 1701, 1915
HapII	CCGG	2 cut(s)	666, 1829
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	348
Hin1II	CATG	5 cut(s)	499, 1105, 1459, 1595, 2226
Hin6I	GCGC	1 cut(s)	346
HinP1I	GCGC	1 cut(s)	346
HincII	GTYRAC	2 cut(s)	784, 1131
HindII	GTYRAC	2 cut(s)	784, 1131
HindIII	AAGCTT	2 cut(s)	761, 1089
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	2 cut(s)	666, 1829
HphI	GGTGA	6 cut(s)	352, 682, 1596, 1859, 2277, 2330
Hpy166II	GTNNAC	7 cut(s)	251, 431, 784, 1131, 1462, 1481, 1850
Hpy8I	GTNNAC	7 cut(s)	251, 431, 784, 1131, 1462, 1481, 1850
Hpy99I	CGWCG	4 cut(s)	40, 67, 161, 209
HpyAV	CCTTC	7 cut(s)	961, 1358, 1708, 1746, 1814, 2072, 2083
HpyCH4III	ACNGT	5 cut(s)	788, 815, 1085, 1974, 2115
HpyF3I	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
Hsp92II	CATG	5 cut(s)	499, 1105, 1459, 1595, 2226
HspAI	GCGC	1 cut(s)	346
KspAI	GTTAAC	1 cut(s)	1131
Kzo9I	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
LmnI	GCTCC	7 cut(s)	109, 934, 1052, 1151, 1829, 2122, 2172
Lsp1109I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
MaeI	CTAG	7 cut(s)	42, 525, 540, 648, 1337, 2235, 2334
MaeIII	GTNAC	9 cut(s)	49, 212, 527, 598, 1214, 1222, 1405, 1624, 1924
MalI	GATC	8 cut(s)	56, 519, 545, 1047, 1160, 1209, 1840, 2010
MboI	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
MboII	GAAGA	4 cut(s)	562, 844, 1349, 2120
MfeI	CAATTG	2 cut(s)	1886, 1917
MflI	RGATCY	5 cut(s)	1045, 1158, 1207, 1838, 2008
MhlI	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1899
MlyI	GAGTC	3 cut(s)	11, 469, 2335
MmeI	TCCRAC	1 cut(s)	1086
Mph1103I	ATGCAT	2 cut(s)	1261, 2134
MroXI	GAANNNNTTC	1 cut(s)	1735
MseI	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1910
MspA1I	CMGCKG	2 cut(s)	177, 1744
MspCI	CTTAAG	3 cut(s)	443, 758, 1909
MspI	CCGG	2 cut(s)	666, 1829
MspR9I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1829
MunI	CAATTG	2 cut(s)	1886, 1917
Mva1269I	GAATGC	4 cut(s)	366, 897, 997, 1443
MvaI	CCWGG	4 cut(s)	339, 492, 960, 1156
MvnI	CGCG	1 cut(s)	228
NciI	CCSGG	1 cut(s)	1829
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
NlaIII	CATG	5 cut(s)	499, 1105, 1459, 1595, 2226
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	5 cut(s)	49, 212, 527, 1214, 1924
NsiI	ATGCAT	2 cut(s)	1261, 2134
NspV	TTCGAA	1 cut(s)	1240
PaeR7I	CTCGAG	3 cut(s)	194, 269, 1650
PcsI	WCGNNNNNNNCGW	4 cut(s)	35, 59, 71, 201
PctI	GAATGC	4 cut(s)	366, 897, 997, 1443
PdmI	GAANNNNTTC	1 cut(s)	1735
PfeI	GAWTC	8 cut(s)	70, 274, 379, 536, 922, 928, 1034, 1804
PflFI	GACNNNGTC	1 cut(s)	1988
PflMI	CCANNNNNTGG	1 cut(s)	1799
PinAI	ACCGGT	1 cut(s)	665
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	3 cut(s)	11, 469, 2334
PpsI	GAGTC	3 cut(s)	11, 469, 2334
PpuMI	RGGWCCY	1 cut(s)	1294
PshBI	ATTAAT	1 cut(s)	804
Psp5II	RGGWCCY	1 cut(s)	1294
Psp6I	CCWGG	4 cut(s)	337, 490, 958, 1154
PspGI	CCWGG	4 cut(s)	337, 490, 958, 1154
PspPI	GGNCC	3 cut(s)	199, 1294, 2058
PspPPI	RGGWCCY	1 cut(s)	1294
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	93, 829
PstNI	CAGNNNCTG	2 cut(s)	931, 2197
PsuI	RGATCY	5 cut(s)	1045, 1158, 1207, 1838, 2008
PsyI	GACNNNGTC	1 cut(s)	1988
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1744
RsaI	GTAC	3 cut(s)	676, 1166, 2230
RsaNI	GTAC	3 cut(s)	675, 1165, 2229
SaqAI	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1910
Sau3AI	GATC	8 cut(s)	54, 517, 543, 1045, 1158, 1207, 1838, 2008
Sau96I	GGNCC	3 cut(s)	199, 1294, 2058
SchI	GAGTC	3 cut(s)	11, 469, 2335
ScrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1829
SduI	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1899
SfcI	CTRYAG	3 cut(s)	89, 825, 2089
Sfr274I	CTCGAG	3 cut(s)	194, 269, 1650
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	2 cut(s)	1294, 2058
SlaI	CTCGAG	3 cut(s)	194, 269, 1650
SmlI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1909
SmoI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1909
SpeI	ACTAGT	1 cut(s)	41
SspMI	CTAG	7 cut(s)	42, 525, 540, 648, 1337, 2235, 2334
StyD4I	CCNGG	5 cut(s)	337, 490, 958, 1154, 1827
TaaI	ACNGT	5 cut(s)	788, 815, 1085, 1974, 2115
TaqI	TCGA	6 cut(s)	195, 270, 1240, 1651, 1868, 2068
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	5 cut(s)	148, 231, 305, 897, 1395
TfiI	GAWTC	8 cut(s)	70, 274, 379, 536, 922, 928, 1034, 1804
Tru1I	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1910
Tru9I	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1910
TscAI	CASTG	7 cut(s)	54, 642, 1358, 1947, 2202, 2263, 2320
TseFI	GTSAC	5 cut(s)	49, 212, 527, 1214, 1924
TseI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1574
Tsp45I	GTSAC	5 cut(s)	49, 212, 527, 1214, 1924
TspDTI	ATGAA	5 cut(s)	1004, 1464, 2054, 2065, 2334
TspGWI	ACGGA	2 cut(s)	1643, 2071
TspRI	CASTG	7 cut(s)	54, 642, 1358, 1947, 2202, 2263, 2320
Tth111I	GACNNNGTC	1 cut(s)	1988
Van91I	CCANNNNNTGG	1 cut(s)	1799
Vha464I	CTTAAG	3 cut(s)	443, 758, 1909
VneI	GTGCAC	1 cut(s)	1479
VpaK11BI	GGWCC	2 cut(s)	1294, 2058
VspI	ATTAAT	1 cut(s)	804
XapI	RAATTY	6 cut(s)	435, 731, 848, 979, 1552, 2210
XbaI	TCTAGA	1 cut(s)	2333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XhoI	CTCGAG	3 cut(s)	194, 269, 1650
XmiI	GTMKAC	1 cut(s)	250
XmnI	GAANNNNTTC	1 cut(s)	1735
XspI	CTAG	7 cut(s)	42, 525, 540, 648, 1337, 2235, 2334
Zsp2I	ATGCAT	2 cut(s)	1261, 2134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.