Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

9672308 .. 9680191

Gene Structure 7884 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGGCGAGGCTGTGGACTCTTTCCCTACGAAGCCGACGACTAGTTCAGTGACGATCGGCTCGTCGCTGATTCCGATAATCAACAAGCTGCAGGACATTCTGGCTCCCGTAGCCTCAGGCAGCGAATTGTCCAAGATTTCGCTGCCCCAAGTTGCCGTCGTGGGAAGCCAAAGCAGCGGCAAATCCAGCGTCCTCGAGGCGCTCGTCGGCCGTGACTTCCTCCCTCGCGGCTGCGATATTTGCACTCGTAGACCTCTCGTCTTGATGCTCGAGAATCGCCCGCCCAATCCCGCCCAAGATGCCGCCCAAACTGAGTGGGGCGAGTTTCGGCATTTGCCTGGAAAGCGCTTCTACGACTTCGCCAGCATTCGCCGAGAGATTCAGGCTGAGACTGAAAGAGAGGCAGGATTGAACAAAGGAGTTTCGGATAAACAAATTCGGCTTAAGATTACCTCTCCGAATGTCCTTAATATGACTCTTGTAGATTTGCCTGGCATCACTAAGGTTCCGGTGGGAGATCAACCTAGTGACATAGAATCAAGGATCAGGAAGATGATAATGGGACATATTAGGCAAGAAAATTGCATTATATTGGCAGTTACTCCCGCCAACGCTGATTTAGCCACCTCTGATGCACTTCAACTCGCTAGAGAAGCTGACCCTACTGGTTTTCGTACCATTGGTGTCATCACCAAGCTTGATATAATGGACAGGGGCACTGACGCCAGCAACTTTTTGCTCGGGAAAGTTGTTCCCCTTAAGCTCGGTTATGTTGGTGTTGTCAACCGTTGTCAGGAGGACATCAATAAAAACCGTAGCATTGCTGCAGCACTTGCTTATGAGGACAAATTCTTCCGTGATAATCCAGTATATAGCAGTCTCTCTGATCGTTGCGGCATTCCCCAGTTAGCAAGGAAACTGAATCAGATTCTGGAGCACCACATCAGGATTGTTCTCCCTGGTTTGAAGGCTGAGTTGAATTCTCAGATGAATGCTATTTATAAAGAACTACAAACATATGGAAAAGTTATGGAATCCAAATTTGCTCTAAATACTTTGTCCCTTTCCCTGAACCAGACAGATCTGGGAGCAACTTTGTTGAACATTTTGTCAAAATACTGTGAAGCTTTTACTGCCATGTTGGATGGAAAAAATCTGGAGATGTCAACTAAAGAATTGTCAGGAGGAGCCAGGATCCAGTACATTTTCCAGTCAATTTTTGTAAAGAGCTTGCAGGAAGTAGATCCCTGTGATGATGTAACTGATGATGATATTCAAACGGCCATTCAAAATGCATCTGGTGCAAGAAATGCTTTATTTGTGCCTGAGGTCCCATTTGAAGTTTTAGTTAGAAGACAGATTGCACGCTTGTTAGACCCAAGCCTTCAGTGTCTTCGTTTTGTTTATGAGGAACTGGTTAAAATTAGTCGTACTTGTGAGGTAACTGAGTTGCAAAGGTTTCCAGTATTGAGAATGCGTTTGGATGAAGTCATGGTAAACTTTTTGCGTGATGGTGCACAGCCTGCTGAGAGAATGATAGAAAATCTTATTGAGATGGAGGTAGATTATATAAACACTTCGCACCCAAATTTTTTAGGTGGGAACAGAGCTGCTGAGATTGCTATGCATGAGTTGAAATCACCACAGATATCTCTGGGCATAACGGATGCTGAAGCCCAAACTTCTCGGGTGGCTCGGGCAAAGATTGGACAATTACCAAATCAGCCCCCATCCATTTTAAGGCCAGCTGAAGTGACAGAGCATAAAGCAGTGGAAATTATTGTAACCAAATTACTCCTGCGGTCATATTATGACATTGTCAGAAAAAACATTCAAGATCTTGTTCCAAAAGCAATTATGCACTTTCTGGTCAATCTTACAAAACGGACCCTTCATCGAACCTTCATTCAAAAGTTGTACAGAGAGAACCTGTTTGAAGAACTGTTGCAGGAGCAGGATGCACTTGTATTGAAAAGAAAACATAACCAAGAATTGCTCCGAGTTTTGGAACAATCTTTGCAGACACTGGAGAAAGTTGAATTTGATGTCTCATCCCATACTTCAAGTTTTGGAACTGATGCTTCCACTGAACTTCCAAGAATTACAAGGATTTCACCACCCCATCAACAATACTCAACAACCAGTGGTGAGATGAGTCAATCTAGATACCATTCATTCTCCGGATCATTTGTTACCAACACTACAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

736

Amino Acids

82.2

Weight (kDa)

6.54

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 233	1e-53	Dynamin family
Dynamin_M	PF01031	241 - 538	7.6e-102	Dynamin central region
GED	PF02212	590 - 679	3.2e-23	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1002
AbsI	CCTCGAGG	1 cut(s)	194
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	1 cut(s)	228
AccIII	TCCGGA	1 cut(s)	2180
AciI	CCGC	8 cut(s)	177, 228, 281, 291, 303, 606, 894, 1801
AclWI	GGATC	5 cut(s)	551, 1189, 1202, 1238, 2191
AcoI	YGGCCR	2 cut(s)	208, 1281
AcsI	RAATTY	6 cut(s)	435, 848, 979, 1040, 1588, 2039
AcuI	CTGAAG	3 cut(s)	1370, 1692, 1770
AcyI	GRCGYC	1 cut(s)	723
AfaI	GTAC	4 cut(s)	676, 1202, 1432, 1919
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	3 cut(s)	793, 1740, 2005
AflII	CTTAAG	2 cut(s)	443, 758
AhdI	GACNNNNNGTC	1 cut(s)	257
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	4 cut(s)	337, 490, 958, 1190
AluBI	AGCT	9 cut(s)	88, 656, 697, 763, 1127, 1230, 1610, 1748, 2207
AluI	AGCT	9 cut(s)	88, 656, 697, 763, 1127, 1230, 1610, 1748, 2207
Alw21I	GWGCWC	2 cut(s)	939, 1519
Alw26I	GTCTC	3 cut(s)	383, 884, 2053
Alw44I	GTGCAC	1 cut(s)	1515
AlwI	GGATC	5 cut(s)	551, 1189, 1202, 1238, 2191
AlwNI	CAGNNNCTG	2 cut(s)	931, 2026
Ama87I	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
Aor13HI	TCCGGA	1 cut(s)	2180
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	3 cut(s)	208, 1281, 1742
ApaLI	GTGCAC	1 cut(s)	1515
ApeKI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1610
ApoI	RAATTY	6 cut(s)	435, 848, 979, 1040, 1588, 2039
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
AspLEI	GCGC	2 cut(s)	202, 348
AspS9I	GGNCC	2 cut(s)	1330, 1887
AsuHPI	GGTGA	4 cut(s)	682, 1632, 2106, 2159
AvaI	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
AvaII	GGWCC	2 cut(s)	1330, 1887
AxyI	CCTNAGG	2 cut(s)	115, 1326
BaeGI	GKGCMC	2 cut(s)	719, 1519
BamHI	GGATCC	1 cut(s)	1194
BbsI	GAAGAC	2 cut(s)	1360, 1385
Bbv12I	GWGCWC	2 cut(s)	939, 1519
BbvI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1597
BccI	CCATC	5 cut(s)	1139, 1505, 1549, 1738, 2130
BceAI	ACGGC	3 cut(s)	140, 195, 1296
BciT130I	CCWGG	4 cut(s)	339, 492, 960, 1192
BcoDI	GTCTC	3 cut(s)	383, 884, 2053
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	4 cut(s)	42, 525, 648, 2163
BfmI	CTRYAG	3 cut(s)	89, 825, 2202
BfoI	RGCGCY	2 cut(s)	203, 349
BfrI	CTTAAG	2 cut(s)	443, 758
BglII	AGATCT	2 cut(s)	1081, 1837
Bme1390I	CCNGG	4 cut(s)	339, 492, 960, 1192
Bme18I	GGWCC	2 cut(s)	1330, 1887
BmeRI	GACNNNNNGTC	1 cut(s)	257
BmeT110I	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
BmgT120I	GGNCC	2 cut(s)	1330, 1887
BmiI	GGNNCC	6 cut(s)	105, 507, 1189, 1196, 1332, 1889
BmrFI	CCNGG	4 cut(s)	339, 492, 960, 1192
BmrI	ACTGGG	1 cut(s)	898
BmsI	GCATC	8 cut(s)	255, 289, 504, 622, 1304, 1657, 1948, 2068
BmuI	ACTGGG	1 cut(s)	898
BpiI	GAAGAC	2 cut(s)	1360, 1385
BpmI	CTGGAG	3 cut(s)	953, 1178, 2048
BsaHI	GRCGYC	1 cut(s)	723
BsaJI	CCNNGG	1 cut(s)	958
BsaWI	WCCGGW	2 cut(s)	508, 2180
Bsc4I	CCNNNNNNNGG	3 cut(s)	793, 1740, 2005
Bse1I	ACTGG	9 cut(s)	670, 866, 904, 1198, 1210, 1419, 1463, 2031, 2142
Bse21I	CCTNAGG	2 cut(s)	115, 1326
Bse3DI	GCAATG	1 cut(s)	819
BseAI	TCCGGA	1 cut(s)	2180
BseBI	CCWGG	4 cut(s)	339, 492, 960, 1192
BseDI	CCNNGG	1 cut(s)	958
BseGI	GGATG	6 cut(s)	1150, 1489, 1672, 1730, 1963, 2051
BseLI	CCNNNNNNNGG	3 cut(s)	793, 1740, 2005
BseMI	GCAATG	1 cut(s)	819
BseMII	CTCAG	9 cut(s)	129, 303, 378, 963, 998, 1317, 1437, 1518, 1605
BseNI	ACTGG	9 cut(s)	670, 866, 904, 1198, 1210, 1419, 1463, 2031, 2142
BseRI	GAGGAG	1 cut(s)	1200
BseSI	GKGCMC	2 cut(s)	719, 1519
BseX3I	CGGCCG	1 cut(s)	208
BseXI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1597
Bsh1236I	CGCG	1 cut(s)	228
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	3 cut(s)	210, 1283, 1744
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	2 cut(s)	939, 1519
BsiHKCI	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
BsiSI	CCGG	2 cut(s)	509, 2181
BslFI	GGGAC	3 cut(s)	576, 1045, 1316
BslI	CCNNNNNNNGG	3 cut(s)	793, 1740, 2005
BsmAI	GTCTC	3 cut(s)	383, 884, 2053
BsmFI	GGGAC	3 cut(s)	576, 1045, 1316
BsmI	GAATGC	4 cut(s)	366, 897, 997, 1479
BsnI	GGCC	3 cut(s)	210, 1283, 1744
BsoBI	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
Bsp1286I	GDGCHC	3 cut(s)	719, 939, 1519
Bsp13I	TCCGGA	1 cut(s)	2180
Bsp1407I	TGTACA	1 cut(s)	1917
Bsp143I	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
BspACI	CCGC	8 cut(s)	177, 228, 281, 291, 303, 606, 894, 1801
BspANI	GGCC	3 cut(s)	210, 1283, 1744
BspCNI	CTCAG	9 cut(s)	128, 304, 379, 964, 997, 1318, 1438, 1519, 1606
BspEI	TCCGGA	1 cut(s)	2180
BspFNI	CGCG	1 cut(s)	228
BspLI	GGNNCC	6 cut(s)	105, 507, 1189, 1196, 1332, 1889
BspMAI	CTGCAG	2 cut(s)	93, 829
BspPI	GGATC	5 cut(s)	551, 1189, 1202, 1238, 2191
BspTI	CTTAAG	2 cut(s)	443, 758
BsrDI	GCAATG	1 cut(s)	819
BsrGI	TGTACA	1 cut(s)	1917
BsrI	ACTGG	9 cut(s)	670, 866, 904, 1198, 1210, 1419, 1463, 2031, 2142
BssECI	CCNNGG	1 cut(s)	958
BssMI	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
BssNI	GRCGYC	1 cut(s)	723
Bst2UI	CCWGG	4 cut(s)	339, 492, 960, 1192
Bst4CI	ACNGT	4 cut(s)	788, 815, 1121, 1944
BstACI	GRCGYC	1 cut(s)	723
BstAFI	CTTAAG	2 cut(s)	443, 758
BstAPI	GCANNNNNTGC	4 cut(s)	833, 1301, 1310, 1523
BstAUI	TGTACA	1 cut(s)	1917
BstC8I	GCNNGC	7 cut(s)	281, 364, 727, 1232, 1366, 1524, 1746
BstF5I	GGATG	6 cut(s)	1150, 1489, 1672, 1730, 1963, 2051
BstFNI	CGCG	1 cut(s)	228
BstH2I	RGCGCY	2 cut(s)	203, 349
BstHHI	GCGC	2 cut(s)	202, 348
BstKTI	GATC	9 cut(s)	57, 520, 546, 889, 1084, 1197, 1246, 1840, 2186
BstMAI	GTCTC	3 cut(s)	383, 884, 2053
BstMBI	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	4 cut(s)	339, 492, 960, 1192
BstSCI	CCNGG	4 cut(s)	337, 490, 958, 1190
BstSFI	CTRYAG	3 cut(s)	89, 825, 2202
BstSLI	GKGCMC	2 cut(s)	719, 1519
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1597
BstV2I	GAAGAC	2 cut(s)	1360, 1385
BstX2I	RGATCY	4 cut(s)	1081, 1194, 1243, 1837
BstYI	RGATCY	4 cut(s)	1081, 1194, 1243, 1837
BstZI	CGGCCG	1 cut(s)	208
Bsu36I	CCTNAGG	2 cut(s)	115, 1326
BsuRI	GGCC	3 cut(s)	210, 1283, 1744
BtsCI	GGATG	6 cut(s)	1150, 1489, 1672, 1730, 1963, 2051
BtsI	GCAGTG	1 cut(s)	1776
BtsIMutI	CAGTG	7 cut(s)	54, 717, 1394, 1776, 2024, 2085, 2149
Cac8I	GCNNGC	7 cut(s)	281, 364, 727, 1232, 1366, 1524, 1746
CaiI	CAGNNNCTG	2 cut(s)	931, 2026
CfoI	GCGC	2 cut(s)	202, 348
Cfr13I	GGNCC	2 cut(s)	1330, 1887
CseI	GACGC	2 cut(s)	178, 731
Csp6I	GTAC	4 cut(s)	675, 1201, 1431, 1918
CspCI	CAANNNNNGTGG	2 cut(s)	296, 331
CviAII	CATG	3 cut(s)	1138, 1492, 1628
CviQI	GTAC	4 cut(s)	675, 1201, 1431, 1918
DpnI	GATC	9 cut(s)	56, 519, 545, 888, 1083, 1196, 1245, 1839, 2185
DpnII	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
DriI	GACNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	2 cut(s)	208, 1281
EagI	CGGCCG	1 cut(s)	208
Eam1105I	GACNNNNNGTC	1 cut(s)	257
EclXI	CGGCCG	1 cut(s)	208
Eco32I	GATATC	1 cut(s)	1650
Eco47I	GGWCC	2 cut(s)	1330, 1887
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco57I	CTGAAG	3 cut(s)	1370, 1692, 1770
Eco81I	CCTNAGG	2 cut(s)	115, 1326
Eco88I	CYCGRG	5 cut(s)	194, 269, 740, 1686, 1695
EcoO109I	RGGNCCY	1 cut(s)	1330
EcoRI	GAATTC	1 cut(s)	979
EcoRII	CCWGG	4 cut(s)	337, 490, 958, 1190
EcoRV	GATATC	1 cut(s)	1650
EcoT22I	ATGCAT	2 cut(s)	1297, 1629
FaeI	CATG	3 cut(s)	1141, 1495, 1631
FalI	AAGNNNNNCTT	2 cut(s)	1297, 1329
FaqI	GGGAC	3 cut(s)	576, 1045, 1316
FatI	CATG	3 cut(s)	1137, 1491, 1627
FauI	CCCGC	3 cut(s)	288, 298, 613
FauNDI	CATATG	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	6 cut(s)	1157, 1496, 1679, 1717, 1970, 2038
FspBI	CTAG	4 cut(s)	42, 525, 648, 2163
GlaI	GCGC	2 cut(s)	201, 347
GsuI	CTGGAG	3 cut(s)	953, 1178, 2048
HaeII	RGCGCY	2 cut(s)	203, 349
HaeIII	GGCC	3 cut(s)	210, 1283, 1744
HapII	CCGG	2 cut(s)	509, 2181
HgaI	GACGC	2 cut(s)	178, 731
HhaI	GCGC	2 cut(s)	202, 348
Hin1I	GRCGYC	1 cut(s)	723
Hin1II	CATG	3 cut(s)	1141, 1495, 1631
Hin6I	GCGC	2 cut(s)	200, 346
HinP1I	GCGC	2 cut(s)	200, 346
HincII	GTYRAC	2 cut(s)	784, 1167
HindII	GTYRAC	2 cut(s)	784, 1167
HindIII	AAGCTT	2 cut(s)	695, 1125
HpaII	CCGG	2 cut(s)	509, 2181
HphI	GGTGA	4 cut(s)	682, 1632, 2106, 2159
Hpy166II	GTNNAC	6 cut(s)	16, 251, 784, 1167, 1498, 1517
Hpy188I	TCNGA	9 cut(s)	75, 427, 459, 631, 886, 927, 987, 1823, 2000
Hpy8I	GTNNAC	6 cut(s)	16, 251, 784, 1167, 1498, 1517
Hpy99I	CGWCG	4 cut(s)	40, 67, 161, 209
HpyAV	CCTTC	4 cut(s)	961, 1394, 1901, 1912
HpyCH4III	ACNGT	4 cut(s)	788, 815, 1121, 1944
Hsp92I	GRCGYC	1 cut(s)	723
Hsp92II	CATG	3 cut(s)	1141, 1495, 1631
HspAI	GCGC	2 cut(s)	200, 346
Kpn2I	TCCGGA	1 cut(s)	2180
Kzo9I	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
LmnI	GCTCC	6 cut(s)	109, 934, 1088, 1187, 1951, 2001
Lsp1109I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1597
LweI	GCATC	8 cut(s)	255, 289, 504, 622, 1304, 1657, 1948, 2068
MaeI	CTAG	4 cut(s)	42, 525, 648, 2163
MaeIII	GTNAC	9 cut(s)	49, 212, 527, 598, 1258, 1441, 1753, 1783, 2191
MalI	GATC	9 cut(s)	56, 519, 545, 888, 1083, 1196, 1245, 1839, 2185
MboI	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
MboII	GAAGA	5 cut(s)	562, 844, 1365, 1385, 1949
MflI	RGATCY	4 cut(s)	1081, 1194, 1243, 1837
MhlI	GDGCHC	3 cut(s)	719, 939, 1519
MlyI	GAGTC	3 cut(s)	11, 469, 2164
MmeI	TCCRAC	1 cut(s)	1122
Mph1103I	ATGCAT	2 cut(s)	1297, 1629
MroI	TCCGGA	1 cut(s)	2180
MseI	TTAA	5 cut(s)	444, 468, 759, 1419, 1739
MspA1I	CMGCKG	2 cut(s)	177, 1748
MspCI	CTTAAG	2 cut(s)	443, 758
MspI	CCGG	2 cut(s)	509, 2181
MspR9I	CCNGG	4 cut(s)	339, 492, 960, 1192
Mva1269I	GAATGC	4 cut(s)	366, 897, 997, 1479
MvaI	CCWGG	4 cut(s)	339, 492, 960, 1192
MvnI	CGCG	1 cut(s)	228
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
NlaIII	CATG	3 cut(s)	1141, 1495, 1631
NlaIV	GGNNCC	6 cut(s)	105, 507, 1189, 1196, 1332, 1889
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	4 cut(s)	49, 212, 527, 1753
NsiI	ATGCAT	2 cut(s)	1297, 1629
PaeR7I	CTCGAG	2 cut(s)	194, 269
PcsI	WCGNNNNNNNCGW	4 cut(s)	35, 59, 71, 201
PctI	GAATGC	4 cut(s)	366, 897, 997, 1479
PfeI	GAWTC	7 cut(s)	70, 274, 379, 536, 922, 928, 1034
PflFI	GACNNNGTC	1 cut(s)	1817
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	3 cut(s)	11, 469, 2163
PpsI	GAGTC	3 cut(s)	11, 469, 2163
PpuMI	RGGWCCY	1 cut(s)	1330
PsiI	TTATAA	1 cut(s)	1002
Psp5II	RGGWCCY	1 cut(s)	1330
Psp6I	CCWGG	4 cut(s)	337, 490, 958, 1190
PspGI	CCWGG	4 cut(s)	337, 490, 958, 1190
PspN4I	GGNNCC	6 cut(s)	105, 507, 1189, 1196, 1332, 1889
PspPI	GGNCC	2 cut(s)	1330, 1887
PspPPI	RGGWCCY	1 cut(s)	1330
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	93, 829
PstNI	CAGNNNCTG	2 cut(s)	931, 2026
PsuI	RGATCY	4 cut(s)	1081, 1194, 1243, 1837
PsyI	GACNNNGTC	1 cut(s)	1817
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1748
RsaI	GTAC	4 cut(s)	676, 1202, 1432, 1919
RsaNI	GTAC	4 cut(s)	675, 1201, 1431, 1918
SaqAI	TTAA	5 cut(s)	444, 468, 759, 1419, 1739
Sau3AI	GATC	9 cut(s)	54, 517, 543, 886, 1081, 1194, 1243, 1837, 2183
Sau96I	GGNCC	2 cut(s)	1330, 1887
SchI	GAGTC	3 cut(s)	11, 469, 2164
ScrFI	CCNGG	4 cut(s)	339, 492, 960, 1192
SduI	GDGCHC	3 cut(s)	719, 939, 1519
SfaNI	GCATC	8 cut(s)	255, 289, 504, 622, 1304, 1657, 1948, 2068
SfcI	CTRYAG	3 cut(s)	89, 825, 2202
Sfr274I	CTCGAG	2 cut(s)	194, 269
SinI	GGWCC	2 cut(s)	1330, 1887
SlaI	CTCGAG	2 cut(s)	194, 269
SmlI	CTYRAG	4 cut(s)	194, 269, 443, 758
SmoI	CTYRAG	4 cut(s)	194, 269, 443, 758
SpeI	ACTAGT	1 cut(s)	41
SsiI	CCGC	8 cut(s)	177, 228, 281, 291, 303, 606, 894, 1801
SspMI	CTAG	4 cut(s)	42, 525, 648, 2163
StyD4I	CCNGG	4 cut(s)	337, 490, 958, 1190
TaaI	ACNGT	4 cut(s)	788, 815, 1121, 1944
TaqI	TCGA	3 cut(s)	195, 270, 1897
TatI	WGTACW	2 cut(s)	1200, 1917
TauI	GCSGC	4 cut(s)	180, 231, 305, 897
TfiI	GAWTC	7 cut(s)	70, 274, 379, 536, 922, 928, 1034
Tru1I	TTAA	5 cut(s)	444, 468, 759, 1419, 1739
Tru9I	TTAA	5 cut(s)	444, 468, 759, 1419, 1739
TscAI	CASTG	7 cut(s)	54, 724, 1394, 1776, 2031, 2092, 2149
TseFI	GTSAC	4 cut(s)	49, 212, 527, 1753
TseI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1610
Tsp45I	GTSAC	4 cut(s)	49, 212, 527, 1753
TspDTI	ATGAA	5 cut(s)	1004, 1500, 1883, 1894, 2163
TspGWI	ACGGA	3 cut(s)	845, 1679, 1900
TspRI	CASTG	7 cut(s)	54, 724, 1394, 1776, 2031, 2092, 2149
Tth111I	GACNNNGTC	1 cut(s)	1817
Vha464I	CTTAAG	2 cut(s)	443, 758
VneI	GTGCAC	1 cut(s)	1515
VpaK11BI	GGWCC	2 cut(s)	1330, 1887
XapI	RAATTY	6 cut(s)	435, 848, 979, 1040, 1588, 2039
XbaI	TCTAGA	1 cut(s)	2162
XhoI	CTCGAG	2 cut(s)	194, 269
XmiI	GTMKAC	1 cut(s)	250
XspI	CTAG	4 cut(s)	42, 525, 648, 2163
Zsp2I	ATGCAT	2 cut(s)	1297, 1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.