Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Reverse (-)

59724268 .. 59731770

Gene Structure 7503 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG411600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGGGCGAGGCAGGGGACTCTTTTCCTACGAAGCCGACGACTAGTTCAGTGACGATCGGCTCGTCGCTGATTCCGATAATCAACAAGCTGCAGGACATTCTGGCTCCCGTAGCCTCAGGCAGCGAATTGTCCAAGATTTCGCTGCCGCAAGTTGCCGTCGTGGGAAGCCAAAGCAGCGGCAAATCCAGCGTCCTCGAGGCCCTCGTCGGCCGTGACTTCCTCCCTCGCGGCTGCGATATTTGCACTCGTAGACCTCTCGTCTTGATGCTCGAGAATCGCCCGCCCAATCCCGCCCAAGATGCCGCCCAAACCGAGTGGGGCGAGTTTCGGCATTTGCCTGGAAAGCGCTTCTACGACTTCACCAGCATTCGCCGAGAGATTCAGGCTGAGACTGAAAGAGAGGCAGGATTGAACAAAGGAGTTTCGGATAAACAAATTCGGCTTAAGATTACCTCTCCGAATGTCCTTAATATGACTCTTGTTGATTTGCCTGGCATCACTAAGGTTCCTGTGGGAGATCAACCTAGTGACATAGAATCAAGGATCAGGAAGATGATAATGGGACATATTAGGCAAGAAAATTGCATTATATTGGCAGTTACTCCTGCCAACGCTGATTTAGCCACCTCTGATGCACTTCAACTCGCTAGAGAAGCTGACCCTACCGGTTTTCGTACCATTGGTGTCATCACCAAGCTGGATATAATGGACAGGGGCACCGATGCCAGCAACCTTTTGCTCGGGAAAGTTGTTCCCCTTAAGCTTGGTTATGTTGGTGTTGTCAACCGTTGTCAGGAGGACATTAATAAAAACAGTAGCATTGCTGCAGCACTTGCTTATGAGGATAAATTCTTCTGCAATAATCCAGTATATAGCAGTCTCTCTGATAGTTGCGGCATTCCCCAGTTAGCAAGGAAACTGAATCAGATTCTGGAGCACCATATCAGGATTGTTCTCCCTGGTTTGAAGGCTGAGTTGAATTCTCAGATGAATGCTATCTATAAGGAACTACAAACATATGGAAAAGTTATGGAATCCAAAACAGATCTGGGAGCAACTTTGTTGAACATTTTGTCAAAATACTGTGAAGCTTTTACTGCCATGTTGGATGGAAAAAATCCGGAGATGTTAACTAAAGAATTGTCAGGAGGAGCCAGGATCCAGTACATTTTCCAGTCAATTTTTGTAAAGAGCTTGCAGGAAGTAGATCCCTGTGACGATGTAACTGATGATGATATTCGAACCGCCATTCAAAATGCATCTGGTGCAAGAGATGCTTTGTTTGTGCCCGAGGTCCCATTTGAAGTTTTAGTTAAAAGAGAGATTGCACGCTTGCTAGACCCAAGCCTTCAGTGTCTTCGTTTTGTTTATGAGGAACTGGTTAAGATTAGCCGCATTTGTGAGGTTACTGAGTTGCAAAGGTTTCCAGTATTGAGAATGCGTTTGGATGAAGTCATGGTAAACTTTTTGCGTGATGGTGCACAGCCTGCTGAGAGAATGATAGAAAATCTTATTGAGATGGAGGCAGATTATATAAACACTTCGCACCCAAATTTTTTAGGTGGGAACAGAGCTGCTGAGATTGCTATGCATGAGTTGAAATCACCACAGATATCTCTGGGCGTAACGGATGCTGAAGCCCAAACTTCTCGAGTGGCTTCGGCAAAGAATGGACAATTACCAAATCAGGGAAGTCGTTCACAGCTGAATAACAATAAACCTGTATCTGGAGGTTCCACAAGGACTTGGGGTCTTCCATCATTATTTGGGAATCGGACATCATCTGAAGGCTCCCTGGATAGCAGATCTTTTGGTGAACAAAACCATTCACAATCGATGCCCTCTGTAATCCAATTGAGAGAGCCCCCATCCATCTTAAGGCCAATTGAAGTGACAGAGCATAAAGCAGTGGAAATTGTCATAACCAAATTACTCTTGCGGTCATATTATGACATTGTCAGAAAAAACATTCAAGATCTTGTTCCAAAAGCAATTATGCACTTTCTGGTCAATCTTACAAAACGGACCCTTCATCGAACCTTCATTCAAAAGTTGTACAGAGAGAACCTGTTTGAAGAACTGTTGCAGGAGCAGGATGCATTTGTATTGAAAAGAAAACATATCCAAGAATTGCTCCCAGTTTTGGAACAATCTTTGCAGACACTGGAGAAAGTTGAATTTGATGTCTCATGCCGTACTTCTAGTTTTGGAACTGATGCTTCCACTGAACTTCCAAGAATTACAAGGATTTCACCATCCCATCAACAATACTCAACAACCAGTGGTGAGATGAGTCAATCTAGATACCATTCATCCTCCAGATCATTTGTTACCAACACTACAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

782

Amino Acids

86.9

Weight (kDa)

6.41

Isoelectric Point (pI)

53.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 233	8.8e-54	Dynamin family
Dynamin_M	PF01031	241 - 526	1.9e-102	Dynamin central region
GED	PF02212	636 - 725	2.3e-23	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	716
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	1 cut(s)	228
AccIII	TCCGGA	1 cut(s)	1120
AclWI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AcoI	YGGCCR	1 cut(s)	208
AcsI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2177
AcuI	CTGAAG	3 cut(s)	1334, 1656, 1806
AfaI	GTAC	4 cut(s)	676, 1166, 2057, 2197
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	5 cut(s)	793, 1688, 1727, 1878, 2143
AflII	CTTAAG	3 cut(s)	443, 758, 1876
AgeI	ACCGGT	1 cut(s)	665
AhdI	GACNNNNNGTC	2 cut(s)	257, 1749
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	5 cut(s)	337, 490, 958, 1154, 1794
AluBI	AGCT	9 cut(s)	88, 656, 697, 763, 1091, 1194, 1574, 1705, 2345
AluI	AGCT	9 cut(s)	88, 656, 697, 763, 1091, 1194, 1574, 1705, 2345
Alw21I	GWGCWC	2 cut(s)	939, 1483
Alw26I	GTCTC	3 cut(s)	383, 884, 2191
Alw44I	GTGCAC	1 cut(s)	1479
AlwI	GGATC	4 cut(s)	551, 1153, 1166, 1202
AlwNI	CAGNNNCTG	2 cut(s)	931, 2164
Ama87I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Aor13HI	TCCGGA	1 cut(s)	1120
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	3 cut(s)	198, 208, 1880
ApaLI	GTGCAC	1 cut(s)	1479
ApeKI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1574
ApoI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2177
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
AseI	ATTAAT	1 cut(s)	804
AsiGI	ACCGGT	1 cut(s)	665
Asp700I	GAANNNNTTC	1 cut(s)	1696
AspLEI	GCGC	1 cut(s)	348
AspS9I	GGNCC	3 cut(s)	199, 1294, 2025
AsuHPI	GGTGA	6 cut(s)	352, 682, 1596, 1826, 2244, 2297
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
AvaII	GGWCC	2 cut(s)	1294, 2025
AxyI	CCTNAGG	1 cut(s)	115
BaeGI	GKGCMC	3 cut(s)	719, 1290, 1483
BamHI	GGATCC	1 cut(s)	1158
BanI	GGYRCC	1 cut(s)	716
BanII	GRGCYC	1 cut(s)	1866
BbsI	GAAGAC	2 cut(s)	1349, 1745
Bbv12I	GWGCWC	2 cut(s)	939, 1483
BbvI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
BccI	CCATC	8 cut(s)	1103, 1469, 1513, 1765, 1876, 1880, 2263, 2268
BceAI	ACGGC	3 cut(s)	140, 195, 2178
BciT130I	CCWGG	5 cut(s)	339, 492, 960, 1156, 1796
BcoDI	GTCTC	3 cut(s)	383, 884, 2191
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	6 cut(s)	42, 525, 648, 1337, 2202, 2301
BfmI	CTRYAG	3 cut(s)	89, 825, 2340
BfoI	RGCGCY	1 cut(s)	349
BfrI	CTTAAG	3 cut(s)	443, 758, 1876
BglII	AGATCT	3 cut(s)	1045, 1805, 1975
Bme1390I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1796
Bme18I	GGWCC	2 cut(s)	1294, 2025
BmeRI	GACNNNNNGTC	2 cut(s)	257, 1749
BmeT110I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BmgT120I	GGNCC	3 cut(s)	199, 1294, 2025
BmiI	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1735, 1792, 2027
BmrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1796
BmrI	ACTGGG	2 cut(s)	898, 2132
BmuI	ACTGGG	2 cut(s)	898, 2132
BpiI	GAAGAC	2 cut(s)	1349, 1745
BpmI	CTGGAG	4 cut(s)	953, 1749, 2186, 2302
Bpu14I	TTCGAA	1 cut(s)	1240
Bsa29I	ATCGAT	1 cut(s)	1835
BsaJI	CCNNGG	3 cut(s)	958, 1290, 1794
BsaWI	WCCGGW	2 cut(s)	665, 1120
Bsc4I	CCNNNNNNNGG	5 cut(s)	793, 1688, 1727, 1878, 2143
Bse118I	RCCGGY	1 cut(s)	665
Bse1I	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2138, 2169, 2280
Bse21I	CCTNAGG	1 cut(s)	115
Bse3DI	GCAATG	1 cut(s)	819
BseAI	TCCGGA	1 cut(s)	1120
BseBI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1796
BseCI	ATCGAT	1 cut(s)	1835
BseDI	CCNNGG	3 cut(s)	958, 1290, 1794
BseGI	GGATG	7 cut(s)	1114, 1453, 1636, 1868, 2101, 2255, 2312
BseLI	CCNNNNNNNGG	5 cut(s)	793, 1688, 1727, 1878, 2143
BseMI	GCAATG	1 cut(s)	819
BseMII	CTCAG	7 cut(s)	129, 378, 963, 998, 1401, 1482, 1569
BseNI	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2138, 2169, 2280
BseRI	GAGGAG	1 cut(s)	1164
BseSI	GKGCMC	3 cut(s)	719, 1290, 1483
BseX3I	CGGCCG	1 cut(s)	208
BseXI	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
Bsh1236I	CGCG	1 cut(s)	228
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	3 cut(s)	200, 210, 1882
BshNI	GGYRCC	1 cut(s)	716
BshTI	ACCGGT	1 cut(s)	665
BshVI	ATCGAT	1 cut(s)	1835
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	2 cut(s)	939, 1483
BsiHKCI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
BsiSI	CCGG	2 cut(s)	666, 1121
BslFI	GGGAC	3 cut(s)	29, 576, 1280
BslI	CCNNNNNNNGG	5 cut(s)	793, 1688, 1727, 1878, 2143
BsmAI	GTCTC	3 cut(s)	383, 884, 2191
BsmFI	GGGAC	3 cut(s)	29, 576, 1280
BsmI	GAATGC	4 cut(s)	366, 897, 997, 1443
BsnI	GGCC	3 cut(s)	200, 210, 1882
BsoBI	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1866
Bsp13I	TCCGGA	1 cut(s)	1120
Bsp1407I	TGTACA	1 cut(s)	2055
Bsp143I	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
BspANI	GGCC	3 cut(s)	200, 210, 1882
BspCNI	CTCAG	7 cut(s)	128, 379, 964, 997, 1402, 1483, 1570
BspDI	ATCGAT	1 cut(s)	1835
BspEI	TCCGGA	1 cut(s)	1120
BspFNI	CGCG	1 cut(s)	228
BspLI	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1735, 1792, 2027
BspMAI	CTGCAG	2 cut(s)	93, 829
BspPI	GGATC	4 cut(s)	551, 1153, 1166, 1202
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	1 cut(s)	716
BspTI	CTTAAG	3 cut(s)	443, 758, 1876
BsrDI	GCAATG	1 cut(s)	819
BsrFI	RCCGGY	1 cut(s)	665
BsrGI	TGTACA	1 cut(s)	2055
BsrI	ACTGG	9 cut(s)	866, 904, 1162, 1174, 1383, 1427, 2138, 2169, 2280
BssAI	RCCGGY	1 cut(s)	665
BssECI	CCNNGG	3 cut(s)	958, 1290, 1794
BssMI	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
Bst2UI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1796
Bst4CI	ACNGT	4 cut(s)	788, 815, 1085, 2082
BstAFI	CTTAAG	3 cut(s)	443, 758, 1876
BstAPI	GCANNNNNTGC	4 cut(s)	833, 1265, 1274, 1487
BstAUI	TGTACA	1 cut(s)	2055
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
BstDEI	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
BstF5I	GGATG	7 cut(s)	1114, 1453, 1636, 1868, 2101, 2255, 2312
BstFNI	CGCG	1 cut(s)	228
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	1 cut(s)	348
BstKTI	GATC	9 cut(s)	57, 520, 546, 1048, 1161, 1210, 1808, 1978, 2324
BstMAI	GTCTC	3 cut(s)	383, 884, 2191
BstMBI	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1796
BstSCI	CCNGG	5 cut(s)	337, 490, 958, 1154, 1794
BstSFI	CTRYAG	3 cut(s)	89, 825, 2340
BstSLI	GKGCMC	3 cut(s)	719, 1290, 1483
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
BstV2I	GAAGAC	2 cut(s)	1349, 1745
BstX2I	RGATCY	5 cut(s)	1045, 1158, 1207, 1805, 1975
BstYI	RGATCY	5 cut(s)	1045, 1158, 1207, 1805, 1975
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	1835
Bsu36I	CCTNAGG	1 cut(s)	115
BsuRI	GGCC	3 cut(s)	200, 210, 1882
BsuTUI	ATCGAT	1 cut(s)	1835
BtsCI	GGATG	7 cut(s)	1114, 1453, 1636, 1868, 2101, 2255, 2312
BtsI	GCAGTG	1 cut(s)	1914
BtsIMutI	CAGTG	6 cut(s)	54, 1358, 1914, 2162, 2223, 2287
Cac8I	GCNNGC	6 cut(s)	281, 727, 1196, 1330, 1334, 1488
CaiI	CAGNNNCTG	2 cut(s)	931, 2164
CfoI	GCGC	1 cut(s)	348
Cfr10I	RCCGGY	1 cut(s)	665
Cfr13I	GGNCC	3 cut(s)	199, 1294, 2025
ClaI	ATCGAT	1 cut(s)	1835
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	4 cut(s)	675, 1165, 2056, 2196
CspAI	ACCGGT	1 cut(s)	665
CspCI	CAANNNNNGTGG	2 cut(s)	296, 331
CviAII	CATG	4 cut(s)	1102, 1456, 1592, 2190
CviQI	GTAC	4 cut(s)	675, 1165, 2056, 2196
DdeI	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
DpnI	GATC	9 cut(s)	56, 519, 545, 1047, 1160, 1209, 1807, 1977, 2323
DpnII	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
DriI	GACNNNNNGTC	2 cut(s)	257, 1749
EaeI	YGGCCR	1 cut(s)	208
EagI	CGGCCG	1 cut(s)	208
Eam1105I	GACNNNNNGTC	2 cut(s)	257, 1749
EclXI	CGGCCG	1 cut(s)	208
Eco24I	GRGCYC	1 cut(s)	1866
Eco32I	GATATC	1 cut(s)	1614
Eco47I	GGWCC	2 cut(s)	1294, 2025
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco57I	CTGAAG	3 cut(s)	1334, 1656, 1806
Eco81I	CCTNAGG	1 cut(s)	115
Eco88I	CYCGRG	5 cut(s)	194, 269, 740, 1289, 1650
EcoO109I	RGGNCCY	2 cut(s)	199, 1294
EcoRI	GAATTC	1 cut(s)	979
EcoRII	CCWGG	5 cut(s)	337, 490, 958, 1154, 1794
EcoRV	GATATC	1 cut(s)	1614
EcoT22I	ATGCAT	3 cut(s)	1261, 1593, 2101
EcoT38I	GRGCYC	1 cut(s)	1866
FaeI	CATG	4 cut(s)	1105, 1459, 1595, 2193
FalI	AAGNNNNNCTT	2 cut(s)	1261, 1293
FaqI	GGGAC	3 cut(s)	29, 576, 1280
FatI	CATG	4 cut(s)	1101, 1455, 1591, 2189
FauI	CCCGC	2 cut(s)	288, 298
FauNDI	CATATG	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	7 cut(s)	1121, 1460, 1643, 1855, 2108, 2242, 2299
FriOI	GRGCYC	1 cut(s)	1866
FspBI	CTAG	6 cut(s)	42, 525, 648, 1337, 2202, 2301
GlaI	GCGC	1 cut(s)	347
GsuI	CTGGAG	4 cut(s)	953, 1749, 2186, 2302
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	3 cut(s)	200, 210, 1882
HapII	CCGG	2 cut(s)	666, 1121
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	348
Hin1II	CATG	4 cut(s)	1105, 1459, 1595, 2193
Hin6I	GCGC	1 cut(s)	346
HinP1I	GCGC	1 cut(s)	346
HincII	GTYRAC	2 cut(s)	784, 1131
HindII	GTYRAC	2 cut(s)	784, 1131
HindIII	AAGCTT	2 cut(s)	761, 1089
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	2 cut(s)	666, 1121
HphI	GGTGA	6 cut(s)	352, 682, 1596, 1826, 2244, 2297
Hpy166II	GTNNAC	7 cut(s)	251, 784, 1131, 1462, 1481, 1700, 1817
Hpy8I	GTNNAC	7 cut(s)	251, 784, 1131, 1462, 1481, 1700, 1817
Hpy99I	CGWCG	4 cut(s)	40, 67, 161, 209
HpyAV	CCTTC	5 cut(s)	961, 1358, 1781, 2039, 2050
HpyCH4III	ACNGT	4 cut(s)	788, 815, 1085, 2082
HpyF3I	CTNAG	8 cut(s)	115, 387, 501, 972, 984, 1410, 1491, 1578
Hsp92II	CATG	4 cut(s)	1105, 1459, 1595, 2193
HspAI	GCGC	1 cut(s)	346
Kpn2I	TCCGGA	1 cut(s)	1120
KspAI	GTTAAC	1 cut(s)	1131
Kzo9I	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
LmnI	GCTCC	7 cut(s)	109, 934, 1052, 1151, 1796, 2089, 2139
Lsp1109I	GCAGC	8 cut(s)	75, 129, 132, 186, 218, 811, 839, 1561
MaeI	CTAG	6 cut(s)	42, 525, 648, 1337, 2202, 2301
MalI	GATC	9 cut(s)	56, 519, 545, 1047, 1160, 1209, 1807, 1977, 2323
MboI	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
MboII	GAAGA	5 cut(s)	562, 844, 1349, 1745, 2087
MfeI	CAATTG	2 cut(s)	1853, 1884
MflI	RGATCY	5 cut(s)	1045, 1158, 1207, 1805, 1975
MhlI	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1866
MlyI	GAGTC	3 cut(s)	11, 469, 2302
MmeI	TCCRAC	1 cut(s)	1086
Mph1103I	ATGCAT	3 cut(s)	1261, 1593, 2101
MroI	TCCGGA	1 cut(s)	1120
MroXI	GAANNNNTTC	1 cut(s)	1696
MseI	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1877
MspA1I	CMGCKG	2 cut(s)	177, 1705
MspCI	CTTAAG	3 cut(s)	443, 758, 1876
MspI	CCGG	2 cut(s)	666, 1121
MspR9I	CCNGG	5 cut(s)	339, 492, 960, 1156, 1796
MunI	CAATTG	2 cut(s)	1853, 1884
Mva1269I	GAATGC	4 cut(s)	366, 897, 997, 1443
MvaI	CCWGG	5 cut(s)	339, 492, 960, 1156, 1796
MvnI	CGCG	1 cut(s)	228
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
NlaIII	CATG	4 cut(s)	1105, 1459, 1595, 2193
NlaIV	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1735, 1792, 2027
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	5 cut(s)	49, 212, 527, 1214, 1891
NsiI	ATGCAT	3 cut(s)	1261, 1593, 2101
NspV	TTCGAA	1 cut(s)	1240
PaeR7I	CTCGAG	3 cut(s)	194, 269, 1650
PcsI	WCGNNNNNNNCGW	4 cut(s)	35, 59, 71, 201
PctI	GAATGC	4 cut(s)	366, 897, 997, 1443
PdmI	GAANNNNTTC	1 cut(s)	1696
PfeI	GAWTC	8 cut(s)	70, 274, 379, 536, 922, 928, 1034, 1771
PflFI	GACNNNGTC	1 cut(s)	1955
PinAI	ACCGGT	1 cut(s)	665
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	3 cut(s)	11, 469, 2301
PpsI	GAGTC	3 cut(s)	11, 469, 2301
PpuMI	RGGWCCY	1 cut(s)	1294
PshBI	ATTAAT	1 cut(s)	804
Psp5II	RGGWCCY	1 cut(s)	1294
Psp6I	CCWGG	5 cut(s)	337, 490, 958, 1154, 1794
PspGI	CCWGG	5 cut(s)	337, 490, 958, 1154, 1794
PspN4I	GGNNCC	9 cut(s)	105, 507, 718, 1153, 1160, 1296, 1735, 1792, 2027
PspPI	GGNCC	3 cut(s)	199, 1294, 2025
PspPPI	RGGWCCY	1 cut(s)	1294
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	93, 829
PstNI	CAGNNNCTG	2 cut(s)	931, 2164
PsuI	RGATCY	5 cut(s)	1045, 1158, 1207, 1805, 1975
PsyI	GACNNNGTC	1 cut(s)	1955
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1705
RsaI	GTAC	4 cut(s)	676, 1166, 2057, 2197
RsaNI	GTAC	4 cut(s)	675, 1165, 2056, 2196
SaqAI	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1877
Sau3AI	GATC	9 cut(s)	54, 517, 543, 1045, 1158, 1207, 1805, 1975, 2321
Sau96I	GGNCC	3 cut(s)	199, 1294, 2025
SchI	GAGTC	3 cut(s)	11, 469, 2302
ScrFI	CCNGG	5 cut(s)	339, 492, 960, 1156, 1796
SduI	GDGCHC	5 cut(s)	719, 939, 1290, 1483, 1866
SfcI	CTRYAG	3 cut(s)	89, 825, 2340
Sfr274I	CTCGAG	3 cut(s)	194, 269, 1650
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	2 cut(s)	1294, 2025
SlaI	CTCGAG	3 cut(s)	194, 269, 1650
SmlI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1876
SmoI	CTYRAG	6 cut(s)	194, 269, 443, 758, 1650, 1876
SpeI	ACTAGT	1 cut(s)	41
SspMI	CTAG	6 cut(s)	42, 525, 648, 1337, 2202, 2301
StyD4I	CCNGG	5 cut(s)	337, 490, 958, 1154, 1794
TaaI	ACNGT	4 cut(s)	788, 815, 1085, 2082
TaqI	TCGA	6 cut(s)	195, 270, 1240, 1651, 1835, 2035
TatI	WGTACW	2 cut(s)	1164, 2055
TauI	GCSGC	6 cut(s)	148, 180, 231, 305, 897, 1395
TfiI	GAWTC	8 cut(s)	70, 274, 379, 536, 922, 928, 1034, 1771
Tru1I	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1877
Tru9I	TTAA	8 cut(s)	444, 468, 759, 804, 1130, 1314, 1383, 1877
TscAI	CASTG	6 cut(s)	54, 1358, 1914, 2169, 2230, 2287
TseFI	GTSAC	5 cut(s)	49, 212, 527, 1214, 1891
TseI	GCWGC	8 cut(s)	88, 120, 142, 174, 231, 824, 827, 1574
Tsp45I	GTSAC	5 cut(s)	49, 212, 527, 1214, 1891
TspDTI	ATGAA	5 cut(s)	1004, 1464, 2021, 2032, 2301
TspGWI	ACGGA	2 cut(s)	1643, 2038
TspRI	CASTG	6 cut(s)	54, 1358, 1914, 2169, 2230, 2287
Tth111I	GACNNNGTC	1 cut(s)	1955
Vha464I	CTTAAG	3 cut(s)	443, 758, 1876
VneI	GTGCAC	1 cut(s)	1479
VpaK11BI	GGWCC	2 cut(s)	1294, 2025
VspI	ATTAAT	1 cut(s)	804
XapI	RAATTY	5 cut(s)	435, 848, 979, 1552, 2177
XbaI	TCTAGA	1 cut(s)	2300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XhoI	CTCGAG	3 cut(s)	194, 269, 1650
XmiI	GTMKAC	1 cut(s)	250
XmnI	GAANNNNTTC	1 cut(s)	1696
XspI	CTAG	6 cut(s)	42, 525, 648, 1337, 2202, 2301
Zsp2I	ATGCAT	3 cut(s)	1261, 1593, 2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.