pycom15g04050
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2457302 .. 2463323
6022 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g04050.4

Sequence Viewer

Length: 1578 bp
ATGGTTAGGAAGATGATTATGCACTATATTATCCAGCAAAACTGTATTATATTGGCGGTTAGTCCTGCGAATTCGGATTTGGCAAACTCCGATGCGCTACAGATGGCTAGAGAAGCCGACCCGACTGGTTTTCGAACAATCGGTGTGATCACCAAGCTTGATATAATGGACAGGGGCACCGATGCTTGTGACTTTTTGCTTGGGAAAACTATTCCGCTGCAGCTCGGTTATGTTGGTGTTGTGAATCGTAGCCAGGAGGACATCAATAAAAACCGTGGGATTGCTGCTGCCCTTGCTTACGAGGAGAAATTCTTCAATAGGCACCCTGTATATAGTAATCTCTTGGATCATTGCGGCATGCCCCAGTTAGCAAGGAAGTTGAATCAGATTCTGGAGCAGCATATCAGAAGGGTTCTCCCCGATTTGAAGGCTCGGTTGAATTCTCAAATGGTTTCTGTTTCGAAAGAATTGCAAGCATATGGGCTACCTTTAGGAACTAAAATGGATCAGGGAATGATTCTGTTGAACATTTTGACAAAATATTGTGAAGCTTTTGCTGCCATGGTGGAGGGAAAAAGTCAGGAGATGTCAACAAAAGAATTGTCAGGAGGAGCCAGGATCCACTACATTCTCCAGTCAATTTTTGTAAAAAGCTTGGAGGGTGTGGACCCCTCCGACGATCTAACTGATGATGATATTCGAACGGCTATTCAAAATGCTTCTGGTGCGAAAAATGCTCTATTTGTGCCTGAGGTCCCATTTGAAAATTTAGTAAGAAGACAAATTGCTCGATTGCTAGACCCAAGCTGTCAGTGTCTGCGTTTTGTTTACGATGAACTAGTTAAGATAAGCCGCGCTTGCGAGGTTATTGAGTTGCAAAGGTTTCCAGTTTTGAGAAAGCATATGGATGAAATCATGATAAACTTTTTGCGGGAAGGTGCAAAGCCTGCTCAGAGAATGATAGAAAATCTTATTGAGATGGAGGTGGATTGTATAAACACTTCGCATCCATGTTTTATAGGTGGGAAGAAAGCTTCTGAGCTTGCTATGCAACAGTTGAAAGCACAACAGGGAAGTCGTCCTCAGCTGAAGAACGAGAATTCTGTATCTTCTGGTTCTACGAGGACTTGGGGTATTCCATCTATATTTGTGAGTAGTACATCAGGTGTACAGTCTGGTAGACCTTTTGGTGAACAACGTCATTCGGAGTCAATGCCCTCTACAATCAATTTGAGAGAGCCACCATCCATCTTAAGGCCAGTTGAAACGACAGAAAATGAAGCAGCGGAAATTATTGTAACCAAATTACTGTTGAAATCCTATTATGACATTGTCAGAAAGAACATTCAAGACCTAGTTCCAAAAGCTATAATGCACTTTCTGGTCAACTCTACGATAAAAAACCTTCAAACGGGCTTTATTCAAAAACTGTACAGAGAGAACCTGTTTGAAGAACTGTTGAAGGAGCATGATGAACTTGATTCAAAAAGAAAATGTGACCAAAAGTTGTTCGAGGTTTTGAAGCAATCTCTTCAGACACTCGAGAAGGTCGAATTTGATGTTTCAACCCAAACTTAA

Protein Analysis

526

Amino Acids

59.27

Weight (kDa)

6.81

Isoelectric Point (pI)

54.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 176, 321
AccI GTMKAC 1 cut(s) 1180
AccII CGCG 1 cut(s) 855
AciI CCGC 6 cut(s) 56, 215, 354, 853, 931, 1286
AclWI GGATC 4 cut(s) 354, 513, 613, 626
AcsI RAATTY 6 cut(s) 70, 308, 439, 766, 1099, 1553
AcuI CTGAAG 2 cut(s) 1109, 1517
AfaI GTAC 3 cut(s) 1159, 1170, 1433
AfiI CCNNNNNNNGG 2 cut(s) 1254, 1411
AflII CTTAAG 1 cut(s) 1252
AhlI ACTAGT 1 cut(s) 838
AjnI CCWGG 2 cut(s) 252, 614
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
AluBI AGCT 9 cut(s) 157, 223, 551, 654, 807, 1034, 1042, 1087, 1367
AluI AGCT 9 cut(s) 157, 223, 551, 654, 807, 1034, 1042, 1087, 1367
AlwI GGATC 4 cut(s) 354, 513, 613, 626
AlwNI CAGNNNCTG 2 cut(s) 391, 817
Ama87I CYCGRG 1 cut(s) 1541
AoxI GGCC 1 cut(s) 1256
ApeKI GCWGC 7 cut(s) 217, 220, 284, 287, 397, 557, 1283
ApoI RAATTY 6 cut(s) 70, 308, 439, 766, 1099, 1553
ArsI GACNNNNNNTTYG 2 cut(s) 587, 619
Asp700I GAANNNNTTC 1 cut(s) 311
AspLEI GCGC 2 cut(s) 97, 857
AspS9I GGNCC 2 cut(s) 667, 754
AsuHPI GGTGA 2 cut(s) 142, 1202
AsuII TTCGAA 3 cut(s) 133, 461, 700
AvaI CYCGRG 1 cut(s) 1541
AvaII GGWCC 2 cut(s) 667, 754
AxyI CCTNAGG 1 cut(s) 750
BaeGI GKGCMC 1 cut(s) 179
BamHI GGATCC 1 cut(s) 618
BanI GGYRCC 2 cut(s) 176, 321
BarI GAAGNNNNNNTAC 2 cut(s) 985, 1017
BbsI GAAGAC 1 cut(s) 784
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 7 cut(s) 204, 232, 271, 274, 409, 544, 1295
BccI CCATC 5 cut(s) 97, 973, 1147, 1252, 1256
BceAI ACGGC 1 cut(s) 720
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 2 cut(s) 254, 616
BclI TGATCA 1 cut(s) 147
BcuI ACTAGT 1 cut(s) 838
BfaI CTAG 4 cut(s) 108, 797, 839, 1355
BfmI CTRYAG 2 cut(s) 98, 218
BfrI CTTAAG 1 cut(s) 1252
BisI GCNGC 9 cut(s) 218, 221, 285, 288, 355, 398, 558, 853, 1284
BlsI GCNGC 9 cut(s) 219, 222, 286, 289, 356, 399, 559, 854, 1285
Bme1390I CCNGG 2 cut(s) 254, 616
Bme18I GGWCC 2 cut(s) 667, 754
BmeT110I CYCGRG 1 cut(s) 1541
BmgT120I GGNCC 2 cut(s) 667, 754
BmiI GGNNCC 6 cut(s) 178, 323, 613, 620, 669, 756
BmrFI CCNGG 2 cut(s) 254, 616
BmrI ACTGGG 1 cut(s) 358
BmsI GCATC 3 cut(s) 82, 172, 1015
BmuI ACTGGG 1 cut(s) 358
BpiI GAAGAC 1 cut(s) 784
BpmI CTGGAG 2 cut(s) 413, 617
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu14I TTCGAA 3 cut(s) 133, 461, 700
BsaJI CCNNGG 2 cut(s) 274, 561
Bsc4I CCNNNNNNNGG 2 cut(s) 1254, 1411
Bse1I ACTGG 5 cut(s) 130, 364, 634, 887, 1259
Bse21I CCTNAGG 1 cut(s) 750
Bse3DI GCAATG 1 cut(s) 349
BseBI CCWGG 2 cut(s) 254, 616
BseDI CCNNGG 2 cut(s) 274, 561
BseGI GGATG 3 cut(s) 913, 1006, 1244
BseLI CCNNNNNNNGG 2 cut(s) 1254, 1411
BseMI GCAATG 1 cut(s) 349
BseMII CTCAG 4 cut(s) 741, 965, 1029, 1097
BseNI ACTGG 5 cut(s) 130, 364, 634, 887, 1259
BseRI GAGGAG 2 cut(s) 317, 624
BseSI GKGCMC 1 cut(s) 179
BseXI GCAGC 7 cut(s) 204, 232, 271, 274, 409, 544, 1295
Bsh1236I CGCG 1 cut(s) 855
BshFI GGCC 1 cut(s) 1258
BshNI GGYRCC 2 cut(s) 176, 321
BsiHKCI CYCGRG 1 cut(s) 1541
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 2 cut(s) 1254, 1411
BsmFI GGGAC 1 cut(s) 740
BsnI GGCC 1 cut(s) 1258
BsoBI CYCGRG 1 cut(s) 1541
Bsp119I TTCGAA 3 cut(s) 133, 461, 700
Bsp1286I GDGCHC 1 cut(s) 179
Bsp1407I TGTACA 2 cut(s) 1168, 1431
Bsp143I GATC 5 cut(s) 147, 346, 505, 618, 679
Bsp19I CCATGG 1 cut(s) 561
BspACI CCGC 6 cut(s) 56, 215, 354, 853, 931, 1286
BspANI GGCC 1 cut(s) 1258
BspCNI CTCAG 4 cut(s) 742, 964, 1030, 1096
BspFNI CGCG 1 cut(s) 855
BspHI TCATGA 1 cut(s) 915
BspLI GGNNCC 6 cut(s) 178, 323, 613, 620, 669, 756
BspMAI CTGCAG 1 cut(s) 222
BspPI GGATC 4 cut(s) 354, 513, 613, 626
BspT104I TTCGAA 3 cut(s) 133, 461, 700
BspT107I GGYRCC 2 cut(s) 176, 321
BspTI CTTAAG 1 cut(s) 1252
BsrDI GCAATG 1 cut(s) 349
BsrGI TGTACA 2 cut(s) 1168, 1431
BsrI ACTGG 5 cut(s) 130, 364, 634, 887, 1259
BssECI CCNNGG 2 cut(s) 274, 561
BssMI GATC 5 cut(s) 147, 346, 505, 618, 679
BssT1I CCWWGG 1 cut(s) 561
Bst2UI CCWGG 2 cut(s) 254, 616
Bst4CI ACNGT 7 cut(s) 44, 275, 1056, 1173, 1311, 1431, 1458
Bst6I CTCTTC 1 cut(s) 1536
BstAFI CTTAAG 1 cut(s) 1252
BstAPI GCANNNNNTGC 1 cut(s) 947
BstAUI TGTACA 2 cut(s) 1168, 1431
BstBI TTCGAA 3 cut(s) 133, 461, 700
BstC8I GCNNGC 5 cut(s) 359, 474, 859, 948, 1044
BstDEI CTNAG 4 cut(s) 750, 951, 1038, 1083
BstDSI CCRYGG 2 cut(s) 274, 561
BstF5I GGATG 3 cut(s) 913, 1006, 1244
BstFNI CGCG 1 cut(s) 855
BstHHI GCGC 2 cut(s) 97, 857
BstKTI GATC 5 cut(s) 150, 349, 508, 621, 682
BstMBI GATC 5 cut(s) 147, 346, 505, 618, 679
BstMWI GCNNNNNNNGC 8 cut(s) 113, 293, 557, 725, 734, 858, 947, 1048
BstNI CCWGG 2 cut(s) 254, 616
BstNSI RCATGY 1 cut(s) 361
BstSCI CCNGG 2 cut(s) 252, 614
BstSFI CTRYAG 2 cut(s) 98, 218
BstSLI GKGCMC 1 cut(s) 179
BstUI CGCG 1 cut(s) 855
BstV1I GCAGC 7 cut(s) 204, 232, 271, 274, 409, 544, 1295
BstV2I GAAGAC 1 cut(s) 784
BstX2I RGATCY 1 cut(s) 618
BstYI RGATCY 1 cut(s) 618
Bsu36I CCTNAGG 1 cut(s) 750
BsuRI GGCC 1 cut(s) 1258
BtgI CCRYGG 2 cut(s) 274, 561
BtsCI GGATG 3 cut(s) 913, 1006, 1244
BtsIMutI CAGTG 1 cut(s) 818
Cac8I GCNNGC 5 cut(s) 359, 474, 859, 948, 1044
CaiI CAGNNNCTG 2 cut(s) 391, 817
CciI TCATGA 1 cut(s) 915
CfoI GCGC 2 cut(s) 97, 857
Cfr13I GGNCC 2 cut(s) 667, 754
Csp6I GTAC 3 cut(s) 1158, 1169, 1432
CviAII CATG 5 cut(s) 358, 562, 916, 1011, 1469
CviQI GTAC 3 cut(s) 1158, 1169, 1432
DdeI CTNAG 4 cut(s) 750, 951, 1038, 1083
DpnI GATC 5 cut(s) 149, 348, 507, 620, 681
DpnII GATC 5 cut(s) 147, 346, 505, 618, 679
Eam1104I CTCTTC 1 cut(s) 1536
EarI CTCTTC 1 cut(s) 1536
Eco130I CCWWGG 1 cut(s) 561
Eco47I GGWCC 2 cut(s) 667, 754
Eco57I CTGAAG 2 cut(s) 1109, 1517
Eco81I CCTNAGG 1 cut(s) 750
Eco88I CYCGRG 1 cut(s) 1541
EcoO109I RGGNCCY 1 cut(s) 754
EcoRI GAATTC 3 cut(s) 70, 439, 1099
EcoRII CCWGG 2 cut(s) 252, 614
EcoT14I CCWWGG 1 cut(s) 561
ErhI CCWWGG 1 cut(s) 561
FaeI CATG 5 cut(s) 361, 565, 919, 1014, 1472
FalI AAGNNNNNCTT 2 cut(s) 841, 873
FaqI GGGAC 1 cut(s) 740
FatI CATG 5 cut(s) 357, 561, 915, 1010, 1468
FauI CCCGC 1 cut(s) 924
FauNDI CATATG 2 cut(s) 478, 903
FbaI TGATCA 1 cut(s) 147
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 9 cut(s) 218, 221, 285, 288, 355, 398, 558, 853, 1284
FokI GGATG 3 cut(s) 920, 993, 1231
Fsp4HI GCNGC 9 cut(s) 218, 221, 285, 288, 355, 398, 558, 853, 1284
FspBI CTAG 4 cut(s) 108, 797, 839, 1355
GlaI GCGC 2 cut(s) 96, 856
GluI GCNGC 9 cut(s) 218, 221, 285, 288, 355, 398, 558, 853, 1284
GsuI CTGGAG 2 cut(s) 413, 617
HaeIII GGCC 1 cut(s) 1258
HhaI GCGC 2 cut(s) 97, 857
Hin1II CATG 5 cut(s) 361, 565, 919, 1014, 1472
Hin6I GCGC 2 cut(s) 95, 855
HinP1I GCGC 2 cut(s) 95, 855
HincII GTYRAC 2 cut(s) 591, 1387
HindII GTYRAC 2 cut(s) 591, 1387
HindIII AAGCTT 4 cut(s) 155, 549, 652, 1032
HinfI GANTC 6 cut(s) 244, 382, 388, 517, 1208, 1481
HphI GGTGA 2 cut(s) 142, 1202
Hpy166II GTNNAC 7 cut(s) 591, 667, 829, 1169, 1181, 1193, 1387
Hpy188III TCNNGA 6 cut(s) 392, 581, 606, 916, 1349, 1543
Hpy8I GTNNAC 7 cut(s) 591, 667, 829, 1169, 1181, 1193, 1387
Hpy99I CGWCG 1 cut(s) 680
HpyAV CCTTC 6 cut(s) 402, 421, 929, 1415, 1456, 1540
HpyCH4III ACNGT 7 cut(s) 44, 275, 1056, 1173, 1311, 1431, 1458
HpyCH4IV ACGT 1 cut(s) 1198
HpyCH4V TGCA 7 cut(s) 22, 220, 472, 877, 941, 1051, 1375
HpyF10VI GCNNNNNNNGC 8 cut(s) 113, 293, 557, 725, 734, 858, 947, 1048
HpyF3I CTNAG 4 cut(s) 750, 951, 1038, 1083
HpySE526I ACGT 1 cut(s) 1198
Hsp92II CATG 5 cut(s) 361, 565, 919, 1014, 1472
HspAI GCGC 2 cut(s) 95, 855
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 5 cut(s) 147, 346, 505, 618, 679
LmnI GCTCC 3 cut(s) 394, 611, 1465
Lsp1109I GCAGC 7 cut(s) 204, 232, 271, 274, 409, 544, 1295
LweI GCATC 3 cut(s) 82, 172, 1015
MaeI CTAG 4 cut(s) 108, 797, 839, 1355
MaeII ACGT 1 cut(s) 1198
MaeIII GTNAC 3 cut(s) 188, 1297, 1496
MalI GATC 5 cut(s) 149, 348, 507, 620, 681
MboI GATC 5 cut(s) 147, 346, 505, 618, 679
MboII GAAGA 8 cut(s) 22, 304, 789, 1039, 1101, 1102, 1463, 1523
MflI RGATCY 1 cut(s) 618
MhlI GDGCHC 1 cut(s) 179
MlyI GAGTC 1 cut(s) 1217
MmeI TCCRAC 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 311
MseI TTAA 3 cut(s) 843, 1253, 1576
MslI CAYNNNNRTG 1 cut(s) 906
MspA1I CMGCKG 3 cut(s) 217, 1087, 1286
MspCI CTTAAG 1 cut(s) 1252
MspR9I CCNGG 2 cut(s) 254, 616
MvaI CCWGG 2 cut(s) 254, 616
MvnI CGCG 1 cut(s) 855
MwoI GCNNNNNNNGC 8 cut(s) 113, 293, 557, 725, 734, 858, 947, 1048
NcoI CCATGG 1 cut(s) 561
NdeI CATATG 2 cut(s) 478, 903
NdeII GATC 5 cut(s) 147, 346, 505, 618, 679
NlaIII CATG 5 cut(s) 361, 565, 919, 1014, 1472
NlaIV GGNNCC 6 cut(s) 178, 323, 613, 620, 669, 756
NmuCI GTSAC 2 cut(s) 188, 1496
NspI RCATGY 1 cut(s) 361
NspV TTCGAA 3 cut(s) 133, 461, 700
PaeI GCATGC 1 cut(s) 361
PaeR7I CTCGAG 1 cut(s) 1541
PagI TCATGA 1 cut(s) 915
PcsI WCGNNNNNNNCGW 1 cut(s) 1548
PdmI GAANNNNTTC 1 cut(s) 311
PfeI GAWTC 5 cut(s) 244, 382, 388, 517, 1481
PflFI GACNNNGTC 1 cut(s) 1331
PkrI GCNGC 9 cut(s) 219, 222, 286, 289, 356, 399, 559, 854, 1285
PleI GAGTC 1 cut(s) 1216
PpsI GAGTC 1 cut(s) 1216
PpuMI RGGWCCY 1 cut(s) 754
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 2 cut(s) 252, 614
PspGI CCWGG 2 cut(s) 252, 614
PspN4I GGNNCC 6 cut(s) 178, 323, 613, 620, 669, 756
PspPI GGNCC 2 cut(s) 667, 754
PspPPI RGGWCCY 1 cut(s) 754
PstI CTGCAG 1 cut(s) 222
PstNI CAGNNNCTG 2 cut(s) 391, 817
PsuI RGATCY 1 cut(s) 618
PsyI GACNNNGTC 1 cut(s) 1331
PvuII CAGCTG 1 cut(s) 1087
RsaI GTAC 3 cut(s) 1159, 1170, 1433
RsaNI GTAC 3 cut(s) 1158, 1169, 1432
RseI CAYNNNNRTG 1 cut(s) 906
SaqAI TTAA 3 cut(s) 843, 1253, 1576
SatI GCNGC 9 cut(s) 218, 221, 285, 288, 355, 398, 558, 853, 1284
Sau3AI GATC 5 cut(s) 147, 346, 505, 618, 679
Sau96I GGNCC 2 cut(s) 667, 754
SchI GAGTC 1 cut(s) 1217
ScrFI CCNGG 2 cut(s) 254, 616
SduI GDGCHC 1 cut(s) 179
SfaNI GCATC 3 cut(s) 82, 172, 1015
SfcI CTRYAG 2 cut(s) 98, 218
Sfr274I CTCGAG 1 cut(s) 1541
SfuI TTCGAA 3 cut(s) 133, 461, 700
SinI GGWCC 2 cut(s) 667, 754
SlaI CTCGAG 1 cut(s) 1541
SmiMI CAYNNNNRTG 1 cut(s) 906
SmlI CTYRAG 2 cut(s) 1252, 1541
SmoI CTYRAG 2 cut(s) 1252, 1541
SpeI ACTAGT 1 cut(s) 838
SphI GCATGC 1 cut(s) 361
SsiI CCGC 6 cut(s) 56, 215, 354, 853, 931, 1286
SspI AATATT 1 cut(s) 542
SspMI CTAG 4 cut(s) 108, 797, 839, 1355
StyD4I CCNGG 2 cut(s) 252, 614
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 7 cut(s) 44, 275, 1056, 1173, 1311, 1431, 1458
TaiI ACGT 1 cut(s) 1201
TaqI TCGA 7 cut(s) 133, 461, 700, 790, 1512, 1542, 1551
TatI WGTACW 3 cut(s) 1157, 1168, 1431
TauI GCSGC 2 cut(s) 357, 855
TfiI GAWTC 5 cut(s) 244, 382, 388, 517, 1481
Tru1I TTAA 3 cut(s) 843, 1253, 1576
Tru9I TTAA 3 cut(s) 843, 1253, 1576
TscAI CASTG 1 cut(s) 818
TseFI GTSAC 2 cut(s) 188, 1496
TseI GCWGC 7 cut(s) 217, 220, 284, 287, 397, 557, 1283
Tsp45I GTSAC 2 cut(s) 188, 1496
TspDTI ATGAA 4 cut(s) 849, 924, 1293, 1488
TspRI CASTG 1 cut(s) 818
Tth111I GACNNNGTC 1 cut(s) 1331
Vha464I CTTAAG 1 cut(s) 1252
VpaK11BI GGWCC 2 cut(s) 667, 754
XapI RAATTY 6 cut(s) 70, 308, 439, 766, 1099, 1553
XceI RCATGY 1 cut(s) 361
XhoI CTCGAG 1 cut(s) 1541
XmiI GTMKAC 1 cut(s) 1180
XmnI GAANNNNTTC 1 cut(s) 311
XspI CTAG 4 cut(s) 108, 797, 839, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.