Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001434.1

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Forward (+)

94738 .. 102711

Gene Structure 7974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001434.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

atgggcgaggcagtggactctttccctacaaagccgacgactagttcagtgacgatcggctcgtcgctgattccgatgatcaacaagctgcaggacattctggctcccgtagccgtaggcagcgaattgtcgaagatttcgctgccgcaagtggcggttgtgggaagccaaagcagcggcaaatccagcgtcctcgaggcgctcgtcggccgtgacttcctccctcgcggctgcgatatttgcactcgtagacctctcgtcttgatgctcgagaatcgcccgcccaatcccgcccaagatgccgcccaaaccgagtggggcgagtttcggcatttgcctggaaagcgcttctacgacttcaccagcattcgccgagagattcagtctgagactgaaaaagaggcaggattgaacaaaggcgtttcggataaacaaattcggctcaagattacctctccgaatgtgcttaatatgacgcttgttgatttgcctggcatcactaaggttccggtgggagatcaacctagtgacatagaatcaaggatcaggaagatgataatgggacatattaggcaagaaaattgcattatattggcagttactcctgccaacgctgatttagccacctctgatgcactgcaactcgctagagaagctgaccctactggttttcgtaccattggtgtcatcaccaaggtttgtctttctcctcttgattcctggttttatgctttgcttgatataatggacaggggcaccgatgccagcaactttttgctcgggaaagttgttccccttaagctcggttatgttggtgttgtcaaccgttgtcaggagattctggagcagcatatcaggattgttctccctggtttgaaggctgagttgaattctcagatgaatgctatttataaagaactacaaacatatggaaaagttatggaatccaaaacagatctgggagcaactttgttgaacattttgtcaaaatactgtgaagcttttactgccatgttggatggaaaaaatccggagatgtcaactaaagaattgtcaggaggagccaggatccagtacattttccagtcaatttttgtaaaaagcttgcaggaagtagatccctgtgatgatgtaactgatgatgatattcgaacggccattcaaaatgcatctggtgcaagaaatgctttatttgtgcctgaggtcccatttgaagttttagttagaagacagattgcacgcttgttagacccaagccttcagtgtcttcgttttgtttatgaggaactggttaagattagtcgcacttgtgaggtaaatgagttgcaaaggtttccagtattgagaatgcgtttggatgaagtcatggtaaactttttgcgtgacggtgcacagcctgctgagagaatgatagaaaatcttattgagatggaggtagattatataaacacttcgcacccaaattttttaggtgggaacagagctgctgagattgctatgcatgagttgaaatcaccacagatatctctgggcataacggatgctgaagcccaaacttctcgggtggctcgggcaaagattggacaattaccaaatcagggaagtcgttcacagctgaataacaataaacctgtatctggttctacaaggacttggactcttccattattatttgggaattggacatcgtctggaggctccctggatagcagatcttttggtgaacagaaccattcacaatcgatgccccctgtaatccaattgagagagcccccatccatcttaaggccagttgaagcgacagagcataaagcagtggaaattattgtaaccaaattactcctgcggtcatattatgacattgtcagaaaaaacattcaagatcttgttccaaaagcaattatgcactttctggtcaatcttacaaaacggacccttcatcgaaccttcattcaaaaattgtacagagagaacctgtttgaagaactgttgcaggagcaggatgcacttgtattgaaaaggaaacataaccaagaattgctccgagttttggaacaatctttgcagacactggagaaagttgaatttgatgtctcatcccatacttcaagttttggaactgatgcttccactgaacttccaagaattacaaggacttcaccaccccatcaacaatactcaacaaccagtggtgagatgagtcaatctagataccattcattctctagatcatttgttaccaacactacagcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

751

Amino Acids

83.89

Weight (kDa)

6.71

Isoelectric Point (pI)

55.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	912
AbsI	CCTCGAGG	1 cut(s)	194
AccB1I	GGYRCC	1 cut(s)	755
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	1 cut(s)	228
AccIII	TCCGGA	1 cut(s)	1030
AciI	CCGC	8 cut(s)	146, 155, 177, 228, 281, 291, 303, 1846
AclWI	GGATC	4 cut(s)	551, 1063, 1076, 1112
AcoI	YGGCCR	2 cut(s)	208, 1155
AcsI	RAATTY	4 cut(s)	435, 889, 1462, 2084
AcuI	CTGAAG	2 cut(s)	1244, 1566
AfaI	GTAC	3 cut(s)	676, 1076, 1964
AfeI	AGCGCT	1 cut(s)	347
AfiI	CCNNNNNNNGG	5 cut(s)	832, 1598, 1637, 1785, 2050
AflII	CTTAAG	2 cut(s)	797, 1783
AhdI	GACNNNNNGTC	1 cut(s)	257
AhlI	ACTAGT	1 cut(s)	41
AjnI	CCWGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
AluBI	AGCT	8 cut(s)	88, 656, 802, 1001, 1104, 1484, 1615, 2252
AluI	AGCT	8 cut(s)	88, 656, 802, 1001, 1104, 1484, 1615, 2252
Alw21I	GWGCWC	1 cut(s)	1393
Alw26I	GTCTC	2 cut(s)	383, 2098
Alw44I	GTGCAC	1 cut(s)	1389
AlwI	GGATC	4 cut(s)	551, 1063, 1076, 1112
AlwNI	CAGNNNCTG	1 cut(s)	2071
Ama87I	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
Aor13HI	TCCGGA	1 cut(s)	1030
Aor51HI	AGCGCT	1 cut(s)	347
AoxI	GGCC	3 cut(s)	208, 1155, 1787
ApaLI	GTGCAC	1 cut(s)	1389
ApeKI	GCWGC	7 cut(s)	88, 120, 142, 174, 231, 847, 1484
ApoI	RAATTY	4 cut(s)	435, 889, 1462, 2084
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
Asp700I	GAANNNNTTC	1 cut(s)	1606
AspLEI	GCGC	2 cut(s)	202, 348
AspS9I	GGNCC	2 cut(s)	1204, 1932
AsuHPI	GGTGA	6 cut(s)	352, 682, 1506, 1733, 2151, 2204
AsuII	TTCGAA	1 cut(s)	1150
AvaI	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
AvaII	GGWCC	2 cut(s)	1204, 1932
AxyI	CCTNAGG	1 cut(s)	1200
BaeGI	GKGCMC	2 cut(s)	758, 1393
BamHI	GGATCC	1 cut(s)	1068
BanI	GGYRCC	1 cut(s)	755
BanII	GRGCYC	1 cut(s)	1773
BbsI	GAAGAC	2 cut(s)	1234, 1259
Bbv12I	GWGCWC	1 cut(s)	1393
BbvI	GCAGC	7 cut(s)	75, 129, 132, 186, 218, 859, 1471
BccI	CCATC	5 cut(s)	1013, 1423, 1783, 1787, 2175
BceAI	ACGGC	3 cut(s)	98, 195, 1170
BciT130I	CCWGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
BclI	TGATCA	1 cut(s)	78
BcoDI	GTCTC	2 cut(s)	383, 2098
BcuI	ACTAGT	1 cut(s)	41
BfaI	CTAG	5 cut(s)	42, 525, 648, 2208, 2226
BfmI	CTRYAG	2 cut(s)	89, 2247
BfoI	RGCGCY	2 cut(s)	203, 349
BfrI	CTTAAG	2 cut(s)	797, 1783
BglII	AGATCT	3 cut(s)	955, 1712, 1882
Bme1390I	CCNGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
Bme18I	GGWCC	2 cut(s)	1204, 1932
BmeRI	GACNNNNNGTC	1 cut(s)	257
BmeT110I	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
BmgT120I	GGNCC	2 cut(s)	1204, 1932
BmiI	GGNNCC	8 cut(s)	105, 507, 757, 1063, 1070, 1206, 1699, 1934
BmrFI	CCNGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
BpiI	GAAGAC	2 cut(s)	1234, 1259
BpmI	CTGGAG	3 cut(s)	863, 1713, 2093
Bpu14I	TTCGAA	1 cut(s)	1150
BpuEI	CTTGAG	1 cut(s)	428
Bsa29I	ATCGAT	1 cut(s)	1742
BsaJI	CCNNGG	3 cut(s)	693, 868, 1701
BsaWI	WCCGGW	2 cut(s)	508, 1030
Bsc4I	CCNNNNNNNGG	5 cut(s)	832, 1598, 1637, 1785, 2050
Bse1I	ACTGG	8 cut(s)	670, 1072, 1084, 1293, 1337, 1790, 2076, 2187
Bse21I	CCTNAGG	1 cut(s)	1200
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
BseCI	ATCGAT	1 cut(s)	1742
BseDI	CCNNGG	3 cut(s)	693, 868, 1701
BseGI	GGATG	6 cut(s)	1024, 1363, 1546, 1775, 2008, 2096
BseLI	CCNNNNNNNGG	5 cut(s)	832, 1598, 1637, 1785, 2050
BseMII	CTCAG	6 cut(s)	378, 873, 908, 1191, 1392, 1479
BseNI	ACTGG	8 cut(s)	670, 1072, 1084, 1293, 1337, 1790, 2076, 2187
BseRI	GAGGAG	2 cut(s)	699, 1074
BseSI	GKGCMC	2 cut(s)	758, 1393
BseX3I	CGGCCG	1 cut(s)	208
BseXI	GCAGC	7 cut(s)	75, 129, 132, 186, 218, 859, 1471
Bsh1236I	CGCG	1 cut(s)	228
Bsh1285I	CGRYCG	2 cut(s)	57, 211
BshFI	GGCC	3 cut(s)	210, 1157, 1789
BshNI	GGYRCC	1 cut(s)	755
BshVI	ATCGAT	1 cut(s)	1742
BsiEI	CGRYCG	2 cut(s)	57, 211
BsiHKAI	GWGCWC	1 cut(s)	1393
BsiHKCI	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
BsiSI	CCGG	2 cut(s)	509, 1031
BslFI	GGGAC	2 cut(s)	576, 1190
BslI	CCNNNNNNNGG	5 cut(s)	832, 1598, 1637, 1785, 2050
BsmAI	GTCTC	2 cut(s)	383, 2098
BsmFI	GGGAC	2 cut(s)	576, 1190
BsmI	GAATGC	3 cut(s)	366, 907, 1353
BsnI	GGCC	3 cut(s)	210, 1157, 1789
BsoBI	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
Bsp119I	TTCGAA	1 cut(s)	1150
Bsp1286I	GDGCHC	3 cut(s)	758, 1393, 1773
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp1407I	TGTACA	1 cut(s)	1962
BspACI	CCGC	8 cut(s)	146, 155, 177, 228, 281, 291, 303, 1846
BspANI	GGCC	3 cut(s)	210, 1157, 1789
BspCNI	CTCAG	6 cut(s)	379, 874, 907, 1192, 1393, 1480
BspDI	ATCGAT	1 cut(s)	1742
BspEI	TCCGGA	1 cut(s)	1030
BspFNI	CGCG	1 cut(s)	228
BspLI	GGNNCC	8 cut(s)	105, 507, 757, 1063, 1070, 1206, 1699, 1934
BspMAI	CTGCAG	1 cut(s)	93
BspPI	GGATC	4 cut(s)	551, 1063, 1076, 1112
BspT104I	TTCGAA	1 cut(s)	1150
BspT107I	GGYRCC	1 cut(s)	755
BspTI	CTTAAG	2 cut(s)	797, 1783
BsrGI	TGTACA	1 cut(s)	1962
BsrI	ACTGG	8 cut(s)	670, 1072, 1084, 1293, 1337, 1790, 2076, 2187
BssECI	CCNNGG	3 cut(s)	693, 868, 1701
BssT1I	CCWWGG	1 cut(s)	693
Bst2UI	CCWGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
Bst4CI	ACNGT	4 cut(s)	827, 995, 1388, 1989
Bst6I	CTCTTC	1 cut(s)	1665
BstAFI	CTTAAG	2 cut(s)	797, 1783
BstAPI	GCANNNNNTGC	3 cut(s)	1175, 1184, 1397
BstAUI	TGTACA	1 cut(s)	1962
BstBI	TTCGAA	1 cut(s)	1150
BstC8I	GCNNGC	5 cut(s)	281, 766, 1106, 1240, 1398
BstDEI	CTNAG	7 cut(s)	387, 501, 882, 894, 1200, 1401, 1488
BstF5I	GGATG	6 cut(s)	1024, 1363, 1546, 1775, 2008, 2096
BstFNI	CGCG	1 cut(s)	228
BstH2I	RGCGCY	2 cut(s)	203, 349
BstHHI	GCGC	2 cut(s)	202, 348
BstMAI	GTCTC	2 cut(s)	383, 2098
BstMCI	CGRYCG	2 cut(s)	57, 211
BstNI	CCWGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
BstSCI	CCNGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
BstSFI	CTRYAG	2 cut(s)	89, 2247
BstSLI	GKGCMC	2 cut(s)	758, 1393
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	7 cut(s)	75, 129, 132, 186, 218, 859, 1471
BstV2I	GAAGAC	2 cut(s)	1234, 1259
BstX2I	RGATCY	5 cut(s)	955, 1068, 1117, 1712, 1882
BstYI	RGATCY	5 cut(s)	955, 1068, 1117, 1712, 1882
BstZI	CGGCCG	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	1742
Bsu36I	CCTNAGG	1 cut(s)	1200
BsuRI	GGCC	3 cut(s)	210, 1157, 1789
BsuTUI	ATCGAT	1 cut(s)	1742
BtsCI	GGATG	6 cut(s)	1024, 1363, 1546, 1775, 2008, 2096
BtsI	GCAGTG	3 cut(s)	18, 635, 1821
BtsIMutI	CAGTG	8 cut(s)	18, 54, 635, 1268, 1821, 2069, 2130, 2194
Cac8I	GCNNGC	5 cut(s)	281, 766, 1106, 1240, 1398
CaiI	CAGNNNCTG	1 cut(s)	2071
CfoI	GCGC	2 cut(s)	202, 348
Cfr13I	GGNCC	2 cut(s)	1204, 1932
ClaI	ATCGAT	1 cut(s)	1742
CseI	GACGC	2 cut(s)	178, 484
Csp6I	GTAC	3 cut(s)	675, 1075, 1963
CspCI	CAANNNNNGTGG	2 cut(s)	296, 331
CviAII	CATG	3 cut(s)	1012, 1366, 1502
CviQI	GTAC	3 cut(s)	675, 1075, 1963
DdeI	CTNAG	7 cut(s)	387, 501, 882, 894, 1200, 1401, 1488
DriI	GACNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	2 cut(s)	208, 1155
EagI	CGGCCG	1 cut(s)	208
Eam1104I	CTCTTC	1 cut(s)	1665
Eam1105I	GACNNNNNGTC	1 cut(s)	257
EarI	CTCTTC	1 cut(s)	1665
EclXI	CGGCCG	1 cut(s)	208
Eco130I	CCWWGG	1 cut(s)	693
Eco24I	GRGCYC	1 cut(s)	1773
Eco32I	GATATC	1 cut(s)	1524
Eco47I	GGWCC	2 cut(s)	1204, 1932
Eco47III	AGCGCT	1 cut(s)	347
Eco52I	CGGCCG	1 cut(s)	208
Eco57I	CTGAAG	2 cut(s)	1244, 1566
Eco81I	CCTNAGG	1 cut(s)	1200
Eco88I	CYCGRG	5 cut(s)	194, 269, 779, 1560, 1569
EcoO109I	RGGNCCY	1 cut(s)	1204
EcoRI	GAATTC	1 cut(s)	889
EcoRII	CCWGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
EcoRV	GATATC	1 cut(s)	1524
EcoT14I	CCWWGG	1 cut(s)	693
EcoT22I	ATGCAT	2 cut(s)	1171, 1503
EcoT38I	GRGCYC	1 cut(s)	1773
ErhI	CCWWGG	1 cut(s)	693
FaeI	CATG	3 cut(s)	1015, 1369, 1505
FalI	AAGNNNNNCTT	2 cut(s)	1171, 1203
FaqI	GGGAC	2 cut(s)	576, 1190
FatI	CATG	3 cut(s)	1011, 1365, 1501
FauI	CCCGC	2 cut(s)	288, 298
FauNDI	CATATG	1 cut(s)	928
FbaI	TGATCA	1 cut(s)	78
FblI	GTMKAC	1 cut(s)	250
FokI	GGATG	6 cut(s)	1031, 1370, 1553, 1762, 2015, 2083
FriOI	GRGCYC	1 cut(s)	1773
FspBI	CTAG	5 cut(s)	42, 525, 648, 2208, 2226
GlaI	GCGC	2 cut(s)	201, 347
GsuI	CTGGAG	3 cut(s)	863, 1713, 2093
HaeII	RGCGCY	2 cut(s)	203, 349
HaeIII	GGCC	3 cut(s)	210, 1157, 1789
HapII	CCGG	2 cut(s)	509, 1031
HgaI	GACGC	2 cut(s)	178, 484
HhaI	GCGC	2 cut(s)	202, 348
Hin1II	CATG	3 cut(s)	1015, 1369, 1505
Hin6I	GCGC	2 cut(s)	200, 346
HinP1I	GCGC	2 cut(s)	200, 346
HincII	GTYRAC	2 cut(s)	823, 1041
HindII	GTYRAC	2 cut(s)	823, 1041
HindIII	AAGCTT	2 cut(s)	999, 1102
HpaII	CCGG	2 cut(s)	509, 1031
HphI	GGTGA	6 cut(s)	352, 682, 1506, 1733, 2151, 2204
Hpy166II	GTNNAC	8 cut(s)	16, 251, 823, 1041, 1372, 1391, 1610, 1724
Hpy188I	TCNGA	8 cut(s)	75, 388, 427, 459, 631, 897, 1868, 2045
Hpy8I	GTNNAC	8 cut(s)	16, 251, 823, 1041, 1372, 1391, 1610, 1724
Hpy99I	CGWCG	3 cut(s)	40, 67, 209
HpyAV	CCTTC	4 cut(s)	871, 1268, 1946, 1957
HpyCH4III	ACNGT	4 cut(s)	827, 995, 1388, 1989
HpyF3I	CTNAG	7 cut(s)	387, 501, 882, 894, 1200, 1401, 1488
Hsp92II	CATG	3 cut(s)	1015, 1369, 1505
HspAI	GCGC	2 cut(s)	200, 346
Kpn2I	TCCGGA	1 cut(s)	1030
Ksp22I	TGATCA	1 cut(s)	78
LmnI	GCTCC	7 cut(s)	109, 844, 962, 1061, 1703, 1996, 2046
Lsp1109I	GCAGC	7 cut(s)	75, 129, 132, 186, 218, 859, 1471
MaeI	CTAG	5 cut(s)	42, 525, 648, 2208, 2226
MaeIII	GTNAC	8 cut(s)	49, 212, 527, 598, 1132, 1382, 1828, 2236
MboII	GAAGA	6 cut(s)	145, 562, 1239, 1259, 1652, 1994
MfeI	CAATTG	1 cut(s)	1760
MflI	RGATCY	5 cut(s)	955, 1068, 1117, 1712, 1882
MhlI	GDGCHC	3 cut(s)	758, 1393, 1773
MlyI	GAGTC	3 cut(s)	11, 1651, 2209
MmeI	TCCRAC	1 cut(s)	996
Mph1103I	ATGCAT	2 cut(s)	1171, 1503
MroI	TCCGGA	1 cut(s)	1030
MroXI	GAANNNNTTC	1 cut(s)	1606
MseI	TTAA	4 cut(s)	468, 798, 1293, 1784
MspA1I	CMGCKG	2 cut(s)	177, 1615
MspCI	CTTAAG	2 cut(s)	797, 1783
MspI	CCGG	2 cut(s)	509, 1031
MspR9I	CCNGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
MunI	CAATTG	1 cut(s)	1760
Mva1269I	GAATGC	3 cut(s)	366, 907, 1353
MvaI	CCWGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
MvnI	CGCG	1 cut(s)	228
NdeI	CATATG	1 cut(s)	928
NlaIII	CATG	3 cut(s)	1015, 1369, 1505
NlaIV	GGNNCC	8 cut(s)	105, 507, 757, 1063, 1070, 1206, 1699, 1934
NmeAIII	GCCGAG	1 cut(s)	398
NmuCI	GTSAC	4 cut(s)	49, 212, 527, 1382
NsiI	ATGCAT	2 cut(s)	1171, 1503
NspV	TTCGAA	1 cut(s)	1150
PaeR7I	CTCGAG	2 cut(s)	194, 269
PcsI	WCGNNNNNNNCGW	3 cut(s)	59, 71, 201
PctI	GAATGC	3 cut(s)	366, 907, 1353
PdmI	GAANNNNTTC	1 cut(s)	1606
PfeI	GAWTC	7 cut(s)	70, 274, 379, 536, 716, 838, 944
PflFI	GACNNNGTC	2 cut(s)	1687, 1862
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	3 cut(s)	11, 1651, 2208
PpsI	GAGTC	3 cut(s)	11, 1651, 2208
PpuMI	RGGWCCY	1 cut(s)	1204
PsiI	TTATAA	1 cut(s)	912
Psp5II	RGGWCCY	1 cut(s)	1204
Psp6I	CCWGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
PspGI	CCWGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
PspN4I	GGNNCC	8 cut(s)	105, 507, 757, 1063, 1070, 1206, 1699, 1934
PspPI	GGNCC	2 cut(s)	1204, 1932
PspPPI	RGGWCCY	1 cut(s)	1204
PspXI	VCTCGAGB	1 cut(s)	194
PstI	CTGCAG	1 cut(s)	93
PstNI	CAGNNNCTG	1 cut(s)	2071
PsuI	RGATCY	5 cut(s)	955, 1068, 1117, 1712, 1882
PsyI	GACNNNGTC	2 cut(s)	1687, 1862
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	1615
RsaI	GTAC	3 cut(s)	676, 1076, 1964
RsaNI	GTAC	3 cut(s)	675, 1075, 1963
SaqAI	TTAA	4 cut(s)	468, 798, 1293, 1784
Sau96I	GGNCC	2 cut(s)	1204, 1932
SchI	GAGTC	3 cut(s)	11, 1651, 2209
ScrFI	CCNGG	6 cut(s)	339, 492, 721, 870, 1066, 1703
SduI	GDGCHC	3 cut(s)	758, 1393, 1773
SfcI	CTRYAG	2 cut(s)	89, 2247
Sfr274I	CTCGAG	2 cut(s)	194, 269
SfuI	TTCGAA	1 cut(s)	1150
SinI	GGWCC	2 cut(s)	1204, 1932
SlaI	CTCGAG	2 cut(s)	194, 269
SmlI	CTYRAG	5 cut(s)	194, 269, 443, 797, 1783
SmoI	CTYRAG	5 cut(s)	194, 269, 443, 797, 1783
SpeI	ACTAGT	1 cut(s)	41
SsiI	CCGC	8 cut(s)	146, 155, 177, 228, 281, 291, 303, 1846
SspMI	CTAG	5 cut(s)	42, 525, 648, 2208, 2226
StyD4I	CCNGG	6 cut(s)	337, 490, 719, 868, 1064, 1701
StyI	CCWWGG	1 cut(s)	693
TaaI	ACNGT	4 cut(s)	827, 995, 1388, 1989
TaqI	TCGA	6 cut(s)	131, 195, 270, 1150, 1742, 1942
TatI	WGTACW	2 cut(s)	1074, 1962
TauI	GCSGC	4 cut(s)	148, 180, 231, 305
TfiI	GAWTC	7 cut(s)	70, 274, 379, 536, 716, 838, 944
Tru1I	TTAA	4 cut(s)	468, 798, 1293, 1784
Tru9I	TTAA	4 cut(s)	468, 798, 1293, 1784
TscAI	CASTG	8 cut(s)	18, 54, 642, 1268, 1821, 2076, 2137, 2194
TseFI	GTSAC	4 cut(s)	49, 212, 527, 1382
TseI	GCWGC	7 cut(s)	88, 120, 142, 174, 231, 847, 1484
Tsp45I	GTSAC	4 cut(s)	49, 212, 527, 1382
TspDTI	ATGAA	5 cut(s)	914, 1374, 1928, 1939, 2208
TspGWI	ACGGA	2 cut(s)	1553, 1945
TspRI	CASTG	8 cut(s)	18, 54, 642, 1268, 1821, 2076, 2137, 2194
Tth111I	GACNNNGTC	2 cut(s)	1687, 1862
Vha464I	CTTAAG	2 cut(s)	797, 1783
VneI	GTGCAC	1 cut(s)	1389
VpaK11BI	GGWCC	2 cut(s)	1204, 1932
XapI	RAATTY	4 cut(s)	435, 889, 1462, 2084
XbaI	TCTAGA	2 cut(s)	2207, 2225
XcmI	CCANNNNNNNNNTGG	1 cut(s)	955
XhoI	CTCGAG	2 cut(s)	194, 269
XmiI	GTMKAC	1 cut(s)	250
XmnI	GAANNNNTTC	1 cut(s)	1606
XspI	CTAG	5 cut(s)	42, 525, 648, 2208, 2226
Zsp2I	ATGCAT	2 cut(s)	1171, 1503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.