Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0006918

Physical Location & Seq

Genomic Coordinates Reverse (-)

4079818 .. 4087934

Gene Structure 8117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1051800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGGAGAAGAAGCTAGGGAAGTCGGCTCCTCGGCAACCAGTCCGAGACCTTCAGTGACGATCGGCTCGTCGCTAATTTCGATGATCAACAAGCTCCAGGATATTCTCGCGCCGGTGGTCAGCGACAAGCCGCAGATTTCGCTGCCTCAGGTGGCGGTCGTGGGAAGCCAGAGCAGCGGGAAGTCGAGCGTCCTCGAAGCCCTGGTCGGCCGAGACTTCCTCCCCCGCGGCCGCGACATCTGCACTCGCCGCCCGCTCGTGCTGATGCTCGAGTATCGCGCGGAAGAACCCGGCGATGAGCACACCGAGTGGGGAGAGTTCCGCCACTTGCCCGGAAAACGCTTCTACGACTTCTCCGCAATCCGCCGCGAAATTCAGGCCGAGACGGATAGGGAGGCCGGATTGAACAAAGGGGTTTCGGATAAGCAAATCCGGCTGAAGATTACCTCTCCGAATGTGCTTAATATGACACTGGTTGATTTGCCCGGAATCACGAAAGTTCCGGTGGGAGATCAACCGAGAGACATAGAAGCAATGATTAGGAAGATGATTATGGACTATATTACACAGCAAAACTGTATTATTTTGGCTGTTAGTCCTGCGAATTCCGATTTGGCAACCTCCGATGCGCTTCAGATGGCTAGAGAAGCCGACCCAAATGGTTTCCGCACAATCGGTGTGATCACCAAGCTTGATATAATGGACAGGGGCACCGATGCCTGTAACTTTTTGCTTGGGAAAGTTATTCCGCTAAAGCTCGGTTATGTTGGTGTTGTGAATCGTAGCCAGGAGGACATCAATAAAAACCGTGGGATTGCTGCTGCACTTGCATACGAGGAGAAATTCTTCAATGAGCACCCTGTGTATAGTAACCTCTCGGATCGTTGCGGCATGCCCCAGTTAGCAAGGAACCTGAATCAGATTCTGGAGCAGCATATCAAAAGGGTTCTCCCTGATTTGAAGGCTCGGTTGAATTCTCAAATGGTTTCTGTTTCCAAAGAACTGCAGGCATATGGGCAACCTTTAGAATCTAAAATGGCGCAGGGAGTGGTTTTGTTGAACATTTTAACAAAATATTGCGAAGCTTTTGCTGCCATGTTGGAGGGAAAAAGTCAGGAGATGTCAACCAAAGAATTATCAGGAGGTGCTAGGATCCACTACATTCTCCAGTCAATTTTTGTAAAAAGCTTGGAGGGTGTGGATCCCTGCGACGATCTAACTGATGATGATATTCGAACGGCTATTCAAAACGCTTCTGGTGCAAAAAATGCTTTATTTGTGCCTGAGGTCCCATTTGAATTTTTAGTAAGAAGACAAATTGCTCGGTTGCTAGACCCAAGCTGTCAGTGTCTTCATTTTGTTTATGATGAACTTGTGAAGATAAGCCGCGCTTGCGAGGTAATTGAGTTGCAAAGGTTTCCAGTATTGAGAAAGTGTCTGGATGAAGTCGTGGTAAACTTTTTGCGGGAAGGGGCAAAGCCTGCCCTGAGAATGATAGAAAATCTTATTGAGATGGAGGTGGATTATATAAACACTTCGCATCCACGTTTTATAGGTGGGAAGAAAGCTTCTGAGCTTGCTATGCAGCAGTTGAAAGCACAAAAGGGTGTTACGGATGTTGAAGGCCAGACATCTCGAACTGTTCAGGCTAAGACAGTTATGAATGGAATTTTACCTTACCAAGGAAGTCGTCCTCAGCTGAATAACGAGAATCCAGTATCTTCTGGTTCTACAAGGACTTGGGGTATTCCGTCTATATTTGGGAGTAGGACATCAGCTGTACAGTCTGGCGGACGTTTTGGTGAACAAAGTCATTCGGAGTCAATGCCCTCTACAATCAATTTGAGAGAGCCACCGTCCATCTTAAGGCCAACTGAAACGACAGACAATGAGGCAGCGGAAATTATTATAACCAAATTACTCTTGCAATCCTATTATGACATTGTCAGAAAGAACATGCAAGACCTAGTTCCAAAAGCTATAATGCACTTTCTGGTCAATTCTACAAAACAGAACCTTCAGACAGCATTTATTCAAAAACTGTACAGAGAGAACATGTTTGATGAACTGTTGAAGGAGCACGATGAACTTGTTTCAAAAAGGAAACGTAACGAAAAGTTGTTCGAGGTTTTCAAGCAGTCTCTTCAGACACTCGAGAAGGTCGAATTTGATGTTTCATCCCAAACTTCAAGTTTGGGCACTGATTTTTCGGTTGGACTGCCAAGGATTCCGAGTACTTTGCCCGATCTGCACAAAACATCTGAGATAATCCAGTTTACGCACCATTCGTTTTCCATGCCATACACGACTGACACCACAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0008017 GO:0008092 GO:0015631 GO:0042579 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 map04139 map04214 map04217 map04621 map04668

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

775

Amino Acids

86.43

Weight (kDa)

6.3

Isoelectric Point (pI)

50.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	51 - 231	1.4e-55	Dynamin family
Dynamin_M	PF01031	239 - 524	1.1e-102	Dynamin central region
GED	PF02212	632 - 721	6.7e-25	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41351
malus_domestica	MD08G1051800.v1.1 MD15G1043500.v1.1
prunus_persica	Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1 Prupe.1G397000_v2.0.a1
pyrus_communis	pycom08g04330 pycom15g04050
rosa_chinensis	RchiOBHm_Chr6g0299161 RchiOBHm_Chr6g0299171
rosa_laevigata	RLG00000011457 RLG00000011458 RLG00000028024
rosa_multiflora	Rmu_sc0001434.1_g000015 Rmu_sc0001434.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168950 Rroxscaffold_7G00168960
rosa_rugosa	Rorug06G0285900.1
rosa_samantha	Rh6BG405100 Rh6CG411300 Rh6CG411600 Rh6DG398000 Rh6DG398200 Rh6DG398300
rosa_wichuraiana	Rw6G034740 Rw6G034750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1910
AccB1I	GGYRCC	1 cut(s)	710
AccBSI	CCGCTC	1 cut(s)	256
AccII	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
AclWI	GGATC	5 cut(s)	888, 1147, 1160, 1196, 1209
AcoI	YGGCCR	2 cut(s)	208, 229
AcsI	RAATTY	7 cut(s)	372, 604, 842, 973, 1298, 1668, 2165
AcuI	CTGAAG	5 cut(s)	36, 458, 617, 2003, 2129
AdeI	CACNNNGTG	2 cut(s)	309, 862
AfaI	GTAC	3 cut(s)	1782, 2045, 2236
AfiI	CCNNNNNNNGG	2 cut(s)	1682, 1866
AflII	CTTAAG	1 cut(s)	1864
AflIII	ACRYGT	1 cut(s)	2055
AjnI	CCWGG	3 cut(s)	96, 201, 786
AjuI	GAANNNNNNNTTGG	2 cut(s)	596, 628
Alw21I	GWGCWC	3 cut(s)	303, 858, 2082
Alw26I	GTCTC	5 cut(s)	40, 207, 377, 516, 2145
AlwI	GGATC	5 cut(s)	888, 1147, 1160, 1196, 1209
AlwNI	CAGNNNCTG	1 cut(s)	925
Ama87I	CYCGRG	2 cut(s)	269, 2153
AoxI	GGCC	6 cut(s)	208, 229, 378, 396, 1624, 1868
ApeKI	GCWGC	8 cut(s)	142, 174, 818, 821, 931, 1091, 1585, 1895
ApoI	RAATTY	7 cut(s)	372, 604, 842, 973, 1298, 1668, 2165
ArsI	GACNNNNNNTTYG	2 cut(s)	189, 221
Asp700I	GAANNNNTTC	1 cut(s)	845
AspLEI	GCGC	5 cut(s)	112, 281, 631, 1042, 1391
AspS9I	GGNCC	1 cut(s)	1288
AsuC2I	CCSGG	3 cut(s)	291, 333, 486
AsuHPI	GGTGA	2 cut(s)	676, 1814
AsuII	TTCGAA	1 cut(s)	1234
AvaI	CYCGRG	2 cut(s)	269, 2153
AvaII	GGWCC	1 cut(s)	1288
AxyI	CCTNAGG	2 cut(s)	147, 1284
BaeGI	GKGCMC	2 cut(s)	713, 2201
BamHI	GGATCC	2 cut(s)	1152, 1201
BanI	GGYRCC	1 cut(s)	710
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	2 cut(s)	1318, 1343
Bbv12I	GWGCWC	3 cut(s)	303, 858, 2082
BbvCI	CCTCAGC	1 cut(s)	1695
BbvI	GCAGC	8 cut(s)	129, 186, 805, 808, 943, 1078, 1597, 1907
BccI	CCATC	3 cut(s)	631, 1507, 1868
BceAI	ACGGC	1 cut(s)	1254
BcgI	CGANNNNNNTGC	4 cut(s)	1070, 1104, 2221, 2255
BciT130I	CCWGG	3 cut(s)	98, 203, 788
BclI	TGATCA	2 cut(s)	84, 681
BcnI	CCSGG	3 cut(s)	291, 333, 486
BcoDI	GTCTC	5 cut(s)	40, 207, 377, 516, 2145
BfaI	CTAG	5 cut(s)	15, 642, 1149, 1331, 1967
BfmI	CTRYAG	1 cut(s)	1004
BfrI	CTTAAG	1 cut(s)	1864
BmcAI	AGTACT	1 cut(s)	2236
Bme1390I	CCNGG	6 cut(s)	98, 203, 291, 333, 486, 788
Bme18I	GGWCC	1 cut(s)	1288
BmeT110I	CYCGRG	2 cut(s)	269, 2153
BmgT120I	GGNCC	1 cut(s)	1288
BmiI	GGNNCC	6 cut(s)	28, 712, 911, 1154, 1203, 1290
BmrFI	CCNGG	6 cut(s)	98, 203, 291, 333, 486, 788
BmrI	ACTGGG	1 cut(s)	892
BmsI	GCATC	4 cut(s)	255, 616, 706, 1549
BmuI	ACTGGG	1 cut(s)	892
BpiI	GAAGAC	2 cut(s)	1318, 1343
BplI	GAGNNNNNCTC	2 cut(s)	204, 236
BpmI	CTGGAG	3 cut(s)	80, 947, 1151
Bpu10I	CCTNAGC	1 cut(s)	1695
Bpu14I	TTCGAA	1 cut(s)	1234
BpuMI	CCSGG	3 cut(s)	291, 333, 486
BsaI	GGTCTC	1 cut(s)	40
BsaJI	CCNNGG	6 cut(s)	30, 201, 226, 808, 1681, 2222
BsaWI	WCCGGW	1 cut(s)	502
BsaXI	ACNNNNNCTCC	2 cut(s)	338, 368
Bsc4I	CCNNNNNNNGG	2 cut(s)	1682, 1866
Bse118I	RCCGGY	1 cut(s)	112
Bse1I	ACTGG	7 cut(s)	39, 477, 898, 1168, 1421, 1715, 2272
Bse21I	CCTNAGG	2 cut(s)	147, 1284
Bse3DI	GCAATG	1 cut(s)	540
BseBI	CCWGG	3 cut(s)	98, 203, 788
BseDI	CCNNGG	6 cut(s)	30, 201, 226, 808, 1681, 2222
BseGI	GGATG	4 cut(s)	1447, 1540, 1621, 2177
BseLI	CCNNNNNNNGG	2 cut(s)	1682, 1866
BseMI	GCAATG	1 cut(s)	540
BseMII	CTCAG	6 cut(s)	161, 1275, 1478, 1563, 1709, 2253
BseNI	ACTGG	7 cut(s)	39, 477, 898, 1168, 1421, 1715, 2272
BseRI	GAGGAG	2 cut(s)	19, 851
BseSI	GKGCMC	2 cut(s)	713, 2201
BseX3I	CGGCCG	2 cut(s)	208, 229
BseXI	GCAGC	8 cut(s)	129, 186, 805, 808, 943, 1078, 1597, 1907
BsgI	GTGCAG	3 cut(s)	226, 807, 2234
Bsh1236I	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
Bsh1285I	CGRYCG	4 cut(s)	63, 159, 211, 232
BshFI	GGCC	6 cut(s)	210, 231, 380, 398, 1626, 1870
BshNI	GGYRCC	1 cut(s)	710
BsiEI	CGRYCG	4 cut(s)	63, 159, 211, 232
BsiHKAI	GWGCWC	3 cut(s)	303, 858, 2082
BsiHKCI	CYCGRG	2 cut(s)	269, 2153
BsiSI	CCGG	7 cut(s)	113, 291, 333, 399, 433, 486, 503
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	2 cut(s)	1682, 1866
BsmAI	GTCTC	5 cut(s)	40, 207, 377, 516, 2145
BsmBI	CGTCTC	1 cut(s)	377
BsmFI	GGGAC	1 cut(s)	1274
BsnI	GGCC	6 cut(s)	210, 231, 380, 398, 1626, 1870
Bso31I	GGTCTC	1 cut(s)	40
BsoBI	CYCGRG	2 cut(s)	269, 2153
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp1286I	GDGCHC	5 cut(s)	303, 713, 858, 2082, 2201
Bsp1407I	TGTACA	2 cut(s)	1780, 2043
Bsp143I	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
BspANI	GGCC	6 cut(s)	210, 231, 380, 398, 1626, 1870
BspCNI	CTCAG	6 cut(s)	160, 1276, 1479, 1564, 1708, 2254
BspFNI	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
BspLI	GGNNCC	6 cut(s)	28, 712, 911, 1154, 1203, 1290
BspMAI	CTGCAG	1 cut(s)	1008
BspPI	GGATC	5 cut(s)	888, 1147, 1160, 1196, 1209
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	1 cut(s)	710
BspTI	CTTAAG	1 cut(s)	1864
BspTNI	GGTCTC	1 cut(s)	40
BsrBI	CCGCTC	1 cut(s)	256
BsrDI	GCAATG	1 cut(s)	540
BsrFI	RCCGGY	1 cut(s)	112
BsrGI	TGTACA	2 cut(s)	1780, 2043
BsrI	ACTGG	7 cut(s)	39, 477, 898, 1168, 1421, 1715, 2272
BssAI	RCCGGY	1 cut(s)	112
BssECI	CCNNGG	6 cut(s)	30, 201, 226, 808, 1681, 2222
BssMI	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	2 cut(s)	1681, 2222
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	3 cut(s)	98, 203, 788
Bst4CI	ACNGT	8 cut(s)	578, 809, 1642, 1657, 1785, 1857, 2043, 2070
Bst6I	CTCTTC	1 cut(s)	2148
BstAFI	CTTAAG	1 cut(s)	1864
BstAPI	GCANNNNNTGC	2 cut(s)	1268, 1481
BstAUI	TGTACA	2 cut(s)	1780, 2043
BstBI	TTCGAA	1 cut(s)	1234
BstC8I	GCNNGC	6 cut(s)	254, 893, 1008, 1393, 1482, 1578
BstDEI	CTNAG	7 cut(s)	147, 1284, 1487, 1572, 1650, 1695, 2262
BstDSI	CCRYGG	2 cut(s)	226, 808
BstENI	CCTNNNNNAGG	1 cut(s)	1680
BstF5I	GGATG	4 cut(s)	1447, 1540, 1621, 2177
BstFNI	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
BstHHI	GCGC	5 cut(s)	112, 281, 631, 1042, 1391
BstKTI	GATC	9 cut(s)	63, 87, 514, 684, 883, 1155, 1204, 1216, 2248
BstMAI	GTCTC	5 cut(s)	40, 207, 377, 516, 2145
BstMBI	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
BstMCI	CGRYCG	4 cut(s)	63, 159, 211, 232
BstNI	CCWGG	3 cut(s)	98, 203, 788
BstNSI	RCATGY	3 cut(s)	895, 1960, 2059
BstSCI	CCNGG	6 cut(s)	96, 201, 289, 331, 484, 786
BstSFI	CTRYAG	1 cut(s)	1004
BstSLI	GKGCMC	2 cut(s)	713, 2201
BstUI	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
BstV1I	GCAGC	8 cut(s)	129, 186, 805, 808, 943, 1078, 1597, 1907
BstV2I	GAAGAC	2 cut(s)	1318, 1343
BstX2I	RGATCY	2 cut(s)	1152, 1201
BstYI	RGATCY	2 cut(s)	1152, 1201
BstZI	CGGCCG	2 cut(s)	208, 229
Bsu36I	CCTNAGG	2 cut(s)	147, 1284
BsuRI	GGCC	6 cut(s)	210, 231, 380, 398, 1626, 1870
BtgI	CCRYGG	2 cut(s)	226, 808
BtgZI	GCGATG	1 cut(s)	309
BtsCI	GGATG	4 cut(s)	1447, 1540, 1621, 2177
BtsIMutI	CAGTG	4 cut(s)	60, 470, 1352, 2199
Cac8I	GCNNGC	6 cut(s)	254, 893, 1008, 1393, 1482, 1578
CaiI	CAGNNNCTG	1 cut(s)	925
CciNI	GCGGCCGC	1 cut(s)	229
CfoI	GCGC	5 cut(s)	112, 281, 631, 1042, 1391
Cfr10I	RCCGGY	1 cut(s)	112
Cfr13I	GGNCC	1 cut(s)	1288
Cfr42I	CCGCGG	1 cut(s)	229
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	1781, 2044, 2235
CviAII	CATG	5 cut(s)	892, 1096, 1957, 2056, 2296
CviQI	GTAC	3 cut(s)	1781, 2044, 2235
DdeI	CTNAG	7 cut(s)	147, 1284, 1487, 1572, 1650, 1695, 2262
DpnI	GATC	9 cut(s)	62, 86, 513, 683, 882, 1154, 1203, 1215, 2247
DpnII	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
DraIII	CACNNNGTG	2 cut(s)	309, 862
EaeI	YGGCCR	2 cut(s)	208, 229
EagI	CGGCCG	2 cut(s)	208, 229
Eam1104I	CTCTTC	1 cut(s)	2148
EarI	CTCTTC	1 cut(s)	2148
EciI	GGCGGA	3 cut(s)	311, 353, 1806
EclXI	CGGCCG	2 cut(s)	208, 229
Eco130I	CCWWGG	2 cut(s)	1681, 2222
Eco31I	GGTCTC	1 cut(s)	40
Eco47I	GGWCC	1 cut(s)	1288
Eco52I	CGGCCG	2 cut(s)	208, 229
Eco57I	CTGAAG	5 cut(s)	36, 458, 617, 2003, 2129
Eco81I	CCTNAGG	2 cut(s)	147, 1284
Eco88I	CYCGRG	2 cut(s)	269, 2153
EcoNI	CCTNNNNNAGG	1 cut(s)	1680
EcoO109I	RGGNCCY	1 cut(s)	1288
EcoRI	GAATTC	2 cut(s)	604, 973
EcoRII	CCWGG	3 cut(s)	96, 201, 786
EcoT14I	CCWWGG	2 cut(s)	1681, 2222
ErhI	CCWWGG	2 cut(s)	1681, 2222
Esp3I	CGTCTC	1 cut(s)	377
FaeI	CATG	5 cut(s)	895, 1099, 1960, 2059, 2299
FalI	AAGNNNNNCTT	2 cut(s)	1375, 1407
FaqI	GGGAC	1 cut(s)	1274
FatI	CATG	5 cut(s)	891, 1095, 1956, 2055, 2295
FauI	CCCGC	4 cut(s)	170, 233, 261, 1458
FauNDI	CATATG	1 cut(s)	1012
FbaI	TGATCA	2 cut(s)	84, 681
FokI	GGATG	4 cut(s)	1454, 1527, 1628, 2164
FspBI	CTAG	5 cut(s)	15, 642, 1149, 1331, 1967
GlaI	GCGC	5 cut(s)	111, 280, 630, 1041, 1390
GsuI	CTGGAG	3 cut(s)	80, 947, 1151
HaeIII	GGCC	6 cut(s)	210, 231, 380, 398, 1626, 1870
HapII	CCGG	7 cut(s)	113, 291, 333, 399, 433, 486, 503
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	5 cut(s)	112, 281, 631, 1042, 1391
Hin1II	CATG	5 cut(s)	895, 1099, 1960, 2059, 2299
Hin6I	GCGC	5 cut(s)	110, 279, 629, 1040, 1389
HinP1I	GCGC	5 cut(s)	110, 279, 629, 1040, 1389
HincII	GTYRAC	1 cut(s)	1125
HindII	GTYRAC	1 cut(s)	1125
HindIII	AAGCTT	4 cut(s)	689, 1083, 1186, 1566
HinfI	GANTC	8 cut(s)	489, 778, 916, 922, 1028, 1711, 1820, 2227
HpaII	CCGG	7 cut(s)	113, 291, 333, 399, 433, 486, 503
HphI	GGTGA	2 cut(s)	676, 1814
Hpy166II	GTNNAC	4 cut(s)	1125, 1456, 1805, 2277
Hpy188III	TCNNGA	7 cut(s)	493, 926, 1115, 1140, 1439, 1635, 2155
Hpy8I	GTNNAC	4 cut(s)	1125, 1456, 1805, 2277
Hpy99I	CGWCG	2 cut(s)	73, 1214
HpyAV	CCTTC	7 cut(s)	60, 955, 1463, 1616, 2027, 2068, 2152
HpyCH4III	ACNGT	8 cut(s)	578, 809, 1642, 1657, 1785, 1857, 2043, 2070
HpyCH4IV	ACGT	3 cut(s)	1546, 1795, 2107
HpyF3I	CTNAG	7 cut(s)	147, 1284, 1487, 1572, 1650, 1695, 2262
HpySE526I	ACGT	3 cut(s)	1546, 1795, 2107
Hsp92II	CATG	5 cut(s)	895, 1099, 1960, 2059, 2299
HspAI	GCGC	5 cut(s)	110, 279, 629, 1040, 1389
Ksp22I	TGATCA	2 cut(s)	84, 681
KspI	CCGCGG	1 cut(s)	229
Kzo9I	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
LmnI	GCTCC	4 cut(s)	32, 99, 928, 2077
Lsp1109I	GCAGC	8 cut(s)	129, 186, 805, 808, 943, 1078, 1597, 1907
LweI	GCATC	4 cut(s)	255, 616, 706, 1549
MaeI	CTAG	5 cut(s)	15, 642, 1149, 1331, 1967
MaeII	ACGT	3 cut(s)	1546, 1795, 2107
MaeIII	GTNAC	5 cut(s)	55, 722, 869, 1609, 2108
MalI	GATC	9 cut(s)	62, 86, 513, 683, 882, 1154, 1203, 1215, 2247
MbiI	CCGCTC	1 cut(s)	256
MboI	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
MflI	RGATCY	2 cut(s)	1152, 1201
MhlI	GDGCHC	5 cut(s)	303, 713, 858, 2082, 2201
MlyI	GAGTC	1 cut(s)	1829
MmeI	TCCRAC	2 cut(s)	1080, 2194
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	3 cut(s)	462, 1067, 1865
MspA1I	CMGCKG	5 cut(s)	177, 228, 1699, 1778, 1898
MspCI	CTTAAG	1 cut(s)	1864
MspI	CCGG	7 cut(s)	113, 291, 333, 399, 433, 486, 503
MspR9I	CCNGG	6 cut(s)	98, 203, 291, 333, 486, 788
MvaI	CCWGG	3 cut(s)	98, 203, 788
MvnI	CGCG	7 cut(s)	110, 228, 234, 279, 281, 369, 1389
NciI	CCSGG	3 cut(s)	291, 333, 486
NdeI	CATATG	1 cut(s)	1012
NdeII	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
NlaIII	CATG	5 cut(s)	895, 1099, 1960, 2059, 2299
NlaIV	GGNNCC	6 cut(s)	28, 712, 911, 1154, 1203, 1290
NmeAIII	GCCGAG	3 cut(s)	11, 236, 406
NmuCI	GTSAC	1 cut(s)	55
NotI	GCGGCCGC	1 cut(s)	229
NspI	RCATGY	3 cut(s)	895, 1960, 2059
NspV	TTCGAA	1 cut(s)	1234
PaeI	GCATGC	1 cut(s)	895
PaeR7I	CTCGAG	2 cut(s)	269, 2153
PciI	ACATGT	1 cut(s)	2055
PcsI	WCGNNNNNNNCGW	4 cut(s)	65, 77, 2160, 2285
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	7 cut(s)	489, 778, 916, 922, 1028, 1711, 2227
PflFI	GACNNNGTC	1 cut(s)	1943
PfoI	TCCNGGA	1 cut(s)	96
Ple19I	CGATCG	1 cut(s)	63
PleI	GAGTC	1 cut(s)	1828
PpsI	GAGTC	1 cut(s)	1828
PpuMI	RGGWCCY	1 cut(s)	1288
PscI	ACATGT	1 cut(s)	2055
PsiI	TTATAA	1 cut(s)	1910
Psp5II	RGGWCCY	1 cut(s)	1288
Psp6I	CCWGG	3 cut(s)	96, 201, 786
PspGI	CCWGG	3 cut(s)	96, 201, 786
PspN4I	GGNNCC	6 cut(s)	28, 712, 911, 1154, 1203, 1290
PspPI	GGNCC	1 cut(s)	1288
PspPPI	RGGWCCY	1 cut(s)	1288
PspXI	VCTCGAGB	1 cut(s)	269
PstI	CTGCAG	1 cut(s)	1008
PstNI	CAGNNNCTG	1 cut(s)	925
PsuI	RGATCY	2 cut(s)	1152, 1201
PsyI	GACNNNGTC	1 cut(s)	1943
PvuI	CGATCG	1 cut(s)	63
PvuII	CAGCTG	2 cut(s)	1699, 1778
RsaI	GTAC	3 cut(s)	1782, 2045, 2236
RsaNI	GTAC	3 cut(s)	1781, 2044, 2235
SacII	CCGCGG	1 cut(s)	229
SaqAI	TTAA	3 cut(s)	462, 1067, 1865
Sau3AI	GATC	9 cut(s)	60, 84, 511, 681, 880, 1152, 1201, 1213, 2245
Sau96I	GGNCC	1 cut(s)	1288
ScaI	AGTACT	1 cut(s)	2236
SchI	GAGTC	1 cut(s)	1829
ScrFI	CCNGG	6 cut(s)	98, 203, 291, 333, 486, 788
SduI	GDGCHC	5 cut(s)	303, 713, 858, 2082, 2201
SfaNI	GCATC	4 cut(s)	255, 616, 706, 1549
SfcI	CTRYAG	1 cut(s)	1004
Sfr274I	CTCGAG	2 cut(s)	269, 2153
Sfr303I	CCGCGG	1 cut(s)	229
SfuI	TTCGAA	1 cut(s)	1234
SgrAI	CRCCGGYG	1 cut(s)	112
SgrBI	CCGCGG	1 cut(s)	229
SinI	GGWCC	1 cut(s)	1288
SlaI	CTCGAG	2 cut(s)	269, 2153
SmlI	CTYRAG	3 cut(s)	269, 1864, 2153
SmoI	CTYRAG	3 cut(s)	269, 1864, 2153
SphI	GCATGC	1 cut(s)	895
SspI	AATATT	1 cut(s)	1076
SspMI	CTAG	5 cut(s)	15, 642, 1149, 1331, 1967
StyD4I	CCNGG	6 cut(s)	96, 201, 289, 331, 484, 786
StyI	CCWWGG	2 cut(s)	1681, 2222
TaaI	ACNGT	8 cut(s)	578, 809, 1642, 1657, 1785, 1857, 2043, 2070
TaiI	ACGT	3 cut(s)	1549, 1798, 2110
TaqI	TCGA	9 cut(s)	80, 185, 195, 270, 1234, 1636, 2124, 2154, 2163
TatI	WGTACW	3 cut(s)	1780, 2043, 2234
TauI	GCSGC	7 cut(s)	133, 231, 234, 252, 369, 891, 1389
TfiI	GAWTC	7 cut(s)	489, 778, 916, 922, 1028, 1711, 2227
Tru1I	TTAA	3 cut(s)	462, 1067, 1865
Tru9I	TTAA	3 cut(s)	462, 1067, 1865
TscAI	CASTG	4 cut(s)	60, 477, 1352, 2206
TseFI	GTSAC	1 cut(s)	55
TseI	GCWGC	8 cut(s)	142, 174, 818, 821, 931, 1091, 1585, 1895
Tsp45I	GTSAC	1 cut(s)	55
TspDTI	ATGAA	7 cut(s)	1343, 1383, 1458, 1676, 2079, 2100, 2166
TspGWI	ACGGA	3 cut(s)	401, 1628, 1740
TspRI	CASTG	4 cut(s)	60, 477, 1352, 2206
Tth111I	GACNNNGTC	1 cut(s)	1943
Vha464I	CTTAAG	1 cut(s)	1864
VpaK11BI	GGWCC	1 cut(s)	1288
XagI	CCTNNNNNAGG	1 cut(s)	1680
XapI	RAATTY	7 cut(s)	372, 604, 842, 973, 1298, 1668, 2165
XceI	RCATGY	3 cut(s)	895, 1960, 2059
XhoI	CTCGAG	2 cut(s)	269, 2153
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	5 cut(s)	15, 642, 1149, 1331, 1967
ZrmI	AGTACT	1 cut(s)	2236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.