Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001648

Physical Location & Seq

Genomic Coordinates Forward (+)

274886 .. 280559

Gene Structure 5674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g00540.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGCCGTTTCCGCCGGCTTCTAGCAAACCGAGCTCACTCAAAAACCGGGTTCGTCTCCGCAAAATTAGGTTTGTGACGTGGGAGGAGCACATTGTGTGTCACGCGCGTGGAAATCGTGTGGTGCATTATTACTTGAAGAAGGCTTCTGGAGAATATGTTCTTGCTGTTATAGGGACCGAGAAGAGTATACGGCACATGCTGTATGTTGTTTCGGATGAGTTTCTAGAGACATGTGGCTCCAATGCATCCATCAATGCGTGTACCAGGTGGCGAGCTAGACGAGAAGTTGTGCACTGGCTTGGATCCTTGCTCTCCAAGCGTGGCCGCTCCGAGGTTTCAAATTCGCCATCAAATGAGACAACGGAAACTTTATCGCTTAATGGAGTCAGTGCTCGTCAAACTGATCAGATGGTTCCAAGGAAACTGAAAGGTCAAAATTCACATATTGAATGGTCTGGTGTTGCCTGGATTTGTGGCAAGCAGCTGAAGCACTACCCAGCATTTTGCAGGAATGGAACTACTGTTTCTGTCCATTCCTTTGTCTACATTATGGCTTTAGAAAAATATTACTACCTTGGTTATGTGGAAGACATGTATGAAGACAGGAAAGGGAAGAGAAAAGTTAAAGTGCGATGGTTTCACCACAGTAAGGAAGTGGAGGATGTGATCCCTGATCTAAACCCACACCAGAGAGAAGTTTTTATCACACCTCATGTACAGGTGATTAGTGCTGAGTGTATTGACGGTCCTGCAACAGTTTTAACTCCTATACATTATGAGAAATGTTTGGCTGTTGCTCACAGTTCTTTATCTGGAGTCCATATGTGCTTTAGACAGTTTAAGAACCATGAGGTTAGGCCCTTCAGTCTTGCAAAGTTGCGGGGGTATTCTACTCAAGCAATCCTTTCTTCCTTACACTTTCCCCAAGTTTCCAAGAAAATAGTCAAATGCCATATGTTATATGATAGAGATGCGGAAGAGCAAACATTTGGTGATCCCCTGAGGGTATATAGTAAGAGAACTAGAAGCTATGAGGAGCATCAGGGATGTGCACCTGGTTATTCGGGTATCGGAAACTTGCATACCCAGAGTCAGCTAAAAAACTGTGTTCCAACATACCCAAAGTTGAAAATAAAATTATCACGCAAAGCAATTGGAGTTGATGTTGAATCTGTTCCCCAGTGTCCATTGTCTTTTAAGGTTGATGAGAAGATAGAATTGCTCTGTCAAGATAGCGGCATCCGAGGATGCTGGTTTAGGTGTAAGGTTTTGAAGACATCTCAGAAGCTTCTCAAAGTTCAATACCATGATGTGCAAGATGTAGATGGATCTGGTAATTTAAAGGAATGGGTTCCTGCGTTTAGAGTTGCTTCTCCTGATAAACTGGGAATGAGATGCTCAGGCCGACTGACAATTCGGCCCTGCCACCCCAATGATTCTGCCATATTTTCTATTGAGGTTGGAGTACCAGTTGATGCATGGTGGAGCGATGGCTGGTGGGAAGGTGTTGTTGCTGGAGTTGACGCCTCTGGAACTGCTATACAAGTCTACTTCCCTGGTGAGGACAAGCTTCTGACTTTCCAGAGGCAGAATATTAGGGCTTCGAGAGACTGGGTTGACAACAAATGGGTTGATATAAAGGCAAGGCCTGATATACTGTTACATATATCTGAAAATGTCAGATGTAGCATTAAAATCATGACGCCCTATGCTAGTGCTACGGCAGAAGGGTGTTGCTCCAAAGTTCATACATCTCCTAAATTTGAAGTTTTTGAAGAAAAACCAGAATTACTAAATTTAGTTCCAATGGGTGATGGGCTGGAAAATGAGAAGATGGTCAATTTGAGGAAGCAGCCGTGTATCAGTAAAGACAAAAACAACAATTCTAGTAATGGTTGTACTTGCAGCAAGGATGATTCTATTGTTGAGGAAGAAGTTGATCCTGCCTGTGAGACATGTCGAACACCACAAGCCATGGAAGTGGCTACTCAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet BAH

Protein Analysis

666

Amino Acids

75.34

Weight (kDa)

8.76

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	159 - 247	2.3e-09	BAH domain
Agenet	PF05641	388 - 462	2.8e-17	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55600 AT5G55600 AT5G55600
fragaria_vesca	FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g29480 FvH4_3g29480 FvH4_3g29480
malus_domestica	MD00G1057800.v1.1 MD03G1186700.v1.1 MD10G1336900.v1.1 MD11G1201800.v1.1
prunus_persica	Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G239800_v2.0.a1 Prupe.4G239800_v2.0.a1
pyrus_communis	pycom03g13890 pycom05g32630 pycom10g28640 pycom11g17430
rosa_chinensis	RchiOBHm_Chr5g0000741 RchiOBHm_Chr5g0054361
rosa_laevigata	RLG00000030891 RLG00000034926
rosa_multiflora	Rmu_co8288121.1_g000001 Rmu_co8324391.1_g000001 Rmu_co8332439.1_g000001 Rmu_co8394963.1_g000001 Rmu_sc0000255.1_g000004
rosa_roxburghii	Rroxscaffold_1G00026510 Rroxscaffold_1G00075490
rosa_rugosa	Rorug04G0386200 Rorug05G0285800
rosa_samantha	Rh5AG006100 Rh5AG356300 Rh5BG007900 Rh5BG367900 Rh5CG006600 Rh5CG391200 Rh5DG006600 Rh5DG382100
rosa_wichuraiana	Rw5G000620 Rw5G033470 Rw5G033640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	327
AccI	GTMKAC	3 cut(s)	187, 543, 1548
AccII	CGCG	2 cut(s)	104, 106
AciI	CCGC	6 cut(s)	11, 58, 325, 880, 974, 1236
AclWI	GGATC	6 cut(s)	297, 310, 661, 989, 1336, 1934
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	4 cut(s)	340, 436, 1760, 1795
AcuI	CTGAAG	2 cut(s)	506, 847
AcyI	GRCGYC	2 cut(s)	1524, 1703
AdeI	CACNNNGTG	1 cut(s)	94
AfaI	GTAC	4 cut(s)	262, 717, 1467, 1900
AfiI	CCNNNNNNNGG	3 cut(s)	331, 649, 1561
AflIII	ACRYGT	3 cut(s)	230, 591, 1955
AgsI	TTSAA	9 cut(s)	136, 339, 449, 1129, 1169, 1273, 1301, 1766, 1775
AjiI	CACGTC	1 cut(s)	78
AjnI	CCWGG	4 cut(s)	263, 464, 1054, 1555
AleI	CACNNNNGTG	1 cut(s)	105
AloI	GAACNNNNNNTCC	2 cut(s)	141, 173
AluBI	AGCT	7 cut(s)	33, 275, 484, 1029, 1096, 1288, 1570
AluI	AGCT	7 cut(s)	33, 275, 484, 1029, 1096, 1288, 1570
Alw21I	GWGCWC	5 cut(s)	35, 90, 294, 394, 1054
Alw26I	GTCTC	5 cut(s)	59, 221, 350, 1602, 1946
Alw44I	GTGCAC	2 cut(s)	290, 1050
AlwI	GGATC	6 cut(s)	297, 310, 661, 989, 1336, 1934
AoxI	GGCC	5 cut(s)	322, 857, 1402, 1418, 1646
ApaLI	GTGCAC	2 cut(s)	290, 1050
ApeKI	GCWGC	3 cut(s)	481, 1852, 1905
ApoI	RAATTY	4 cut(s)	340, 436, 1760, 1795
ArsI	GACNNNNNNTTYG	2 cut(s)	1398, 1430
Asp700I	GAANNNNTTC	3 cut(s)	156, 1173, 1350
AspLEI	GCGC	1 cut(s)	106
AspS9I	GGNCC	4 cut(s)	174, 746, 858, 1419
AsuC2I	CCSGG	1 cut(s)	47
AsuHPI	GGTGA	5 cut(s)	632, 733, 1004, 1571, 1823
AvaII	GGWCC	2 cut(s)	174, 746
AxyI	CCTNAGG	1 cut(s)	1001
BaeGI	GKGCMC	2 cut(s)	294, 1054
BamHI	GGATCC	1 cut(s)	302
BanII	GRGCYC	1 cut(s)	35
BbsI	GAAGAC	3 cut(s)	594, 606, 1280
Bbv12I	GWGCWC	5 cut(s)	35, 90, 294, 394, 1054
BbvI	GCAGC	3 cut(s)	493, 1864, 1917
BccI	CCATC	8 cut(s)	257, 355, 403, 627, 1319, 1484, 1808, 1828
BceAI	ACGGC	3 cut(s)	206, 1737, 1840
BciT130I	CCWGG	4 cut(s)	265, 466, 1056, 1557
BclI	TGATCA	1 cut(s)	403
BcnI	CCSGG	1 cut(s)	47
BcoDI	GTCTC	5 cut(s)	59, 221, 350, 1602, 1946
BfaI	CTAG	6 cut(s)	21, 224, 276, 1023, 1713, 1887
BisI	GCNGC	5 cut(s)	325, 482, 1237, 1853, 1906
BlsI	GCNGC	5 cut(s)	326, 483, 1238, 1854, 1907
Bme1390I	CCNGG	5 cut(s)	47, 265, 466, 1056, 1557
Bme18I	GGWCC	2 cut(s)	174, 746
BmgBI	CACGTC	1 cut(s)	78
BmgT120I	GGNCC	4 cut(s)	174, 746, 858, 1419
BmiI	GGNNCC	5 cut(s)	175, 238, 304, 414, 1353
BmrFI	CCNGG	5 cut(s)	47, 265, 466, 1056, 1557
BmrI	ACTGGG	3 cut(s)	1174, 1394, 1621
BmsI	GCATC	7 cut(s)	254, 961, 1048, 1238, 1248, 1385, 1465
BmuI	ACTGGG	3 cut(s)	1174, 1394, 1621
BpiI	GAAGAC	3 cut(s)	594, 606, 1280
BpmI	CTGGAG	3 cut(s)	168, 834, 1536
Bpu10I	CCTNAGC	1 cut(s)	1399
BpuEI	CTTGAG	1 cut(s)	879
BpuMI	CCSGG	1 cut(s)	47
BsaHI	GRCGYC	2 cut(s)	1524, 1703
BsaJI	CCNNGG	6 cut(s)	330, 416, 574, 1243, 1555, 1974
BsaXI	ACNNNNNCTCC	6 cut(s)	141, 171, 1149, 1179, 1455, 1485
Bsc4I	CCNNNNNNNGG	3 cut(s)	331, 649, 1561
Bse118I	RCCGGY	1 cut(s)	13
Bse1I	ACTGG	5 cut(s)	299, 1180, 1389, 1469, 1616
Bse21I	CCTNAGG	1 cut(s)	1001
BseBI	CCWGG	4 cut(s)	265, 466, 1056, 1557
BseDI	CCNNGG	6 cut(s)	330, 416, 574, 1243, 1555, 1974
BseGI	GGATG	7 cut(s)	220, 245, 667, 1052, 1239, 1253, 1918
BseLI	CCNNNNNNNGG	3 cut(s)	331, 649, 1561
BseMII	CTCAG	4 cut(s)	723, 992, 1295, 1413
BseNI	ACTGG	5 cut(s)	299, 1180, 1389, 1469, 1616
BseRI	GAGGAG	2 cut(s)	98, 1049
BseSI	GKGCMC	2 cut(s)	294, 1054
BseXI	GCAGC	3 cut(s)	493, 1864, 1917
BseYI	CCCAGC	1 cut(s)	496
Bsh1236I	CGCG	2 cut(s)	104, 106
BshFI	GGCC	5 cut(s)	324, 859, 1404, 1420, 1648
BsiHKAI	GWGCWC	5 cut(s)	35, 90, 294, 394, 1054
BsiSI	CCGG	2 cut(s)	14, 46
BslFI	GGGAC	1 cut(s)	187
BslI	CCNNNNNNNGG	3 cut(s)	331, 649, 1561
BsmAI	GTCTC	5 cut(s)	59, 221, 350, 1602, 1946
BsmBI	CGTCTC	1 cut(s)	59
BsmFI	GGGAC	1 cut(s)	187
BsnI	GGCC	5 cut(s)	324, 859, 1404, 1420, 1648
Bsp1286I	GDGCHC	5 cut(s)	35, 90, 294, 394, 1054
Bsp1407I	TGTACA	1 cut(s)	715
Bsp143I	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
Bsp19I	CCATGG	1 cut(s)	1974
BspACI	CCGC	6 cut(s)	11, 58, 325, 880, 974, 1236
BspANI	GGCC	5 cut(s)	324, 859, 1404, 1420, 1648
BspCNI	CTCAG	4 cut(s)	724, 993, 1294, 1412
BspFNI	CGCG	2 cut(s)	104, 106
BspHI	TCATGA	1 cut(s)	1698
BspLI	GGNNCC	5 cut(s)	175, 238, 304, 414, 1353
BspPI	GGATC	6 cut(s)	297, 310, 661, 989, 1336, 1934
BspQI	GCTCTTC	1 cut(s)	972
BsrBI	CCGCTC	1 cut(s)	327
BsrFI	RCCGGY	1 cut(s)	13
BsrGI	TGTACA	1 cut(s)	715
BsrI	ACTGG	5 cut(s)	299, 1180, 1389, 1469, 1616
BssAI	RCCGGY	1 cut(s)	13
BssECI	CCNNGG	6 cut(s)	330, 416, 574, 1243, 1555, 1974
BssMI	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
BssNAI	GTATAC	1 cut(s)	188
BssNI	GRCGYC	2 cut(s)	1524, 1703
BssT1I	CCWWGG	3 cut(s)	416, 574, 1974
Bst1107I	GTATAC	1 cut(s)	188
Bst2UI	CCWGG	4 cut(s)	265, 466, 1056, 1557
Bst4CI	ACNGT	8 cut(s)	523, 647, 746, 757, 803, 837, 1106, 1659
Bst6I	CTCTTC	3 cut(s)	176, 608, 972
BstACI	GRCGYC	2 cut(s)	1524, 1703
BstAUI	TGTACA	1 cut(s)	715
BstC8I	GCNNGC	3 cut(s)	15, 273, 479
BstDEI	CTNAG	5 cut(s)	732, 1001, 1281, 1399, 1989
BstDSI	CCRYGG	1 cut(s)	1974
BstF5I	GGATG	7 cut(s)	220, 245, 667, 1052, 1239, 1253, 1918
BstFNI	CGCG	2 cut(s)	104, 106
BstHHI	GCGC	1 cut(s)	106
BstKTI	GATC	7 cut(s)	305, 406, 669, 676, 997, 1331, 1942
BstMAI	GTCTC	5 cut(s)	59, 221, 350, 1602, 1946
BstMBI	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 30, 316, 487
BstNI	CCWGG	4 cut(s)	265, 466, 1056, 1557
BstNSI	RCATGY	4 cut(s)	199, 234, 595, 1959
BstSCI	CCNGG	5 cut(s)	45, 263, 464, 1054, 1555
BstSLI	GKGCMC	2 cut(s)	294, 1054
BstUI	CGCG	2 cut(s)	104, 106
BstV1I	GCAGC	3 cut(s)	493, 1864, 1917
BstV2I	GAAGAC	3 cut(s)	594, 606, 1280
BstX2I	RGATCY	2 cut(s)	302, 1328
BstXI	CCANNNNNNTGG	1 cut(s)	1981
BstYI	RGATCY	2 cut(s)	302, 1328
BstZ17I	GTATAC	1 cut(s)	188
Bsu36I	CCTNAGG	1 cut(s)	1001
BsuRI	GGCC	5 cut(s)	324, 859, 1404, 1420, 1648
BtgI	CCRYGG	1 cut(s)	1974
BtgZI	GCGATG	2 cut(s)	646, 1503
BtrI	CACGTC	1 cut(s)	78
BtsCI	GGATG	7 cut(s)	220, 245, 667, 1052, 1239, 1253, 1918
BtsIMutI	CAGTG	3 cut(s)	292, 394, 1187
Cac8I	GCNNGC	3 cut(s)	15, 273, 479
CciI	TCATGA	1 cut(s)	1698
CfoI	GCGC	1 cut(s)	106
Cfr10I	RCCGGY	1 cut(s)	13
Cfr13I	GGNCC	4 cut(s)	174, 746, 858, 1419
CseI	GACGC	2 cut(s)	1532, 1711
CsiI	ACCWGGT	2 cut(s)	263, 1054
Csp6I	GTAC	4 cut(s)	261, 716, 1466, 1899
CviQI	GTAC	4 cut(s)	261, 716, 1466, 1899
DdeI	CTNAG	5 cut(s)	732, 1001, 1281, 1399, 1989
DpnI	GATC	7 cut(s)	304, 405, 668, 675, 996, 1330, 1941
DpnII	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
DraI	TTTAAA	1 cut(s)	1341
DraIII	CACNNNGTG	1 cut(s)	94
EaeI	YGGCCR	1 cut(s)	322
Eam1104I	CTCTTC	3 cut(s)	176, 608, 972
EarI	CTCTTC	3 cut(s)	176, 608, 972
Ecl136II	GAGCTC	1 cut(s)	33
Eco130I	CCWWGG	3 cut(s)	416, 574, 1974
Eco147I	AGGCCT	1 cut(s)	1648
Eco24I	GRGCYC	1 cut(s)	35
Eco47I	GGWCC	2 cut(s)	174, 746
Eco53kI	GAGCTC	1 cut(s)	33
Eco57I	CTGAAG	2 cut(s)	506, 847
Eco81I	CCTNAGG	1 cut(s)	1001
EcoICRI	GAGCTC	1 cut(s)	33
EcoO109I	RGGNCCY	1 cut(s)	858
EcoRII	CCWGG	4 cut(s)	263, 464, 1054, 1555
EcoT14I	CCWWGG	3 cut(s)	416, 574, 1974
EcoT22I	ATGCAT	2 cut(s)	247, 1480
EcoT38I	GRGCYC	1 cut(s)	35
ErhI	CCWWGG	3 cut(s)	416, 574, 1974
Esp3I	CGTCTC	1 cut(s)	59
FalI	AAGNNNNNCTT	2 cut(s)	888, 920
FaqI	GGGAC	1 cut(s)	187
FauI	CCCGC	1 cut(s)	873
FauNDI	CATATG	2 cut(s)	822, 954
FbaI	TGATCA	1 cut(s)	403
FblI	GTMKAC	3 cut(s)	187, 543, 1548
Fnu4HI	GCNGC	5 cut(s)	325, 482, 1237, 1853, 1906
FokI	GGATG	7 cut(s)	227, 232, 674, 1059, 1226, 1260, 1925
FriOI	GRGCYC	1 cut(s)	35
Fsp4HI	GCNGC	5 cut(s)	325, 482, 1237, 1853, 1906
FspBI	CTAG	6 cut(s)	21, 224, 276, 1023, 1713, 1887
GlaI	GCGC	1 cut(s)	105
GluI	GCNGC	5 cut(s)	325, 482, 1237, 1853, 1906
GsaI	CCCAGC	1 cut(s)	500
GsuI	CTGGAG	3 cut(s)	168, 834, 1536
HaeIII	GGCC	5 cut(s)	324, 859, 1404, 1420, 1648
HapII	CCGG	2 cut(s)	14, 46
HgaI	GACGC	2 cut(s)	1532, 1711
HhaI	GCGC	1 cut(s)	106
Hin1I	GRCGYC	2 cut(s)	1524, 1703
Hin6I	GCGC	1 cut(s)	104
HinP1I	GCGC	1 cut(s)	104
HincII	GTYRAC	2 cut(s)	1522, 1618
HindII	GTYRAC	2 cut(s)	1522, 1618
HindIII	AAGCTT	2 cut(s)	1286, 1568
HinfI	GANTC	6 cut(s)	384, 816, 1090, 1169, 1436, 1916
HpaII	CCGG	2 cut(s)	14, 46
HphI	GGTGA	5 cut(s)	632, 733, 1004, 1571, 1823
Hpy166II	GTNNAC	8 cut(s)	188, 261, 292, 544, 1052, 1522, 1549, 1618
Hpy188I	TCNGA	9 cut(s)	214, 331, 408, 1073, 1244, 1284, 1575, 1672, 1682
Hpy8I	GTNNAC	8 cut(s)	188, 261, 292, 544, 1052, 1522, 1549, 1618
HpyAV	CCTTC	4 cut(s)	133, 871, 1496, 1721
HpyCH4III	ACNGT	8 cut(s)	523, 647, 746, 757, 803, 837, 1106, 1659
HpyCH4IV	ACGT	1 cut(s)	77
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 30, 316, 487
HpyF3I	CTNAG	5 cut(s)	732, 1001, 1281, 1399, 1989
HpySE526I	ACGT	1 cut(s)	77
Hsp92I	GRCGYC	2 cut(s)	1524, 1703
HspAI	GCGC	1 cut(s)	104
KroI	GCCGGC	1 cut(s)	13
KroNI	GCCGGC	1 cut(s)	15
Ksp22I	TGATCA	1 cut(s)	403
Kzo9I	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
LguI	GCTCTTC	1 cut(s)	972
LmnI	GCTCC	6 cut(s)	85, 242, 332, 1036, 1485, 1742
Lsp1109I	GCAGC	3 cut(s)	493, 1864, 1917
LweI	GCATC	7 cut(s)	254, 961, 1048, 1238, 1248, 1385, 1465
MabI	ACCWGGT	2 cut(s)	263, 1054
MaeI	CTAG	6 cut(s)	21, 224, 276, 1023, 1713, 1887
MaeII	ACGT	1 cut(s)	77
MaeIII	GTNAC	3 cut(s)	73, 98, 1659
MalI	GATC	7 cut(s)	304, 405, 668, 675, 996, 1330, 1941
MbiI	CCGCTC	1 cut(s)	327
MboI	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	2 cut(s)	302, 1328
MhlI	GDGCHC	5 cut(s)	35, 90, 294, 394, 1054
MlyI	GAGTC	3 cut(s)	393, 825, 1099
MmeI	TCCRAC	2 cut(s)	1136, 1441
Mph1103I	ATGCAT	2 cut(s)	247, 1480
MroNI	GCCGGC	1 cut(s)	13
MroXI	GAANNNNTTC	3 cut(s)	156, 1173, 1350
MseI	TTAA	7 cut(s)	378, 624, 761, 840, 1197, 1340, 1692
MslI	CAYNNNNRTG	3 cut(s)	105, 1431, 1979
MspA1I	CMGCKG	1 cut(s)	484
MspI	CCGG	2 cut(s)	14, 46
MspR9I	CCNGG	5 cut(s)	47, 265, 466, 1056, 1557
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	4 cut(s)	265, 466, 1056, 1557
MvnI	CGCG	2 cut(s)	104, 106
MwoI	GCNNNNNNNGC	4 cut(s)	10, 30, 316, 487
NaeI	GCCGGC	1 cut(s)	15
NciI	CCSGG	1 cut(s)	47
NcoI	CCATGG	1 cut(s)	1974
NdeI	CATATG	2 cut(s)	822, 954
NdeII	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
NgoMIV	GCCGGC	1 cut(s)	13
NlaIV	GGNNCC	5 cut(s)	175, 238, 304, 414, 1353
NmuCI	GTSAC	2 cut(s)	73, 98
NsiI	ATGCAT	2 cut(s)	247, 1480
NspI	RCATGY	4 cut(s)	199, 234, 595, 1959
OliI	CACNNNNGTG	1 cut(s)	105
PagI	TCATGA	1 cut(s)	1698
PceI	AGGCCT	1 cut(s)	1648
PciI	ACATGT	3 cut(s)	230, 591, 1955
PciSI	GCTCTTC	1 cut(s)	972
PdiI	GCCGGC	1 cut(s)	15
PdmI	GAANNNNTTC	3 cut(s)	156, 1173, 1350
PfeI	GAWTC	3 cut(s)	1169, 1436, 1916
PkrI	GCNGC	5 cut(s)	326, 483, 1238, 1854, 1907
PleI	GAGTC	3 cut(s)	392, 824, 1098
PpsI	GAGTC	3 cut(s)	392, 824, 1098
PscI	ACATGT	3 cut(s)	230, 591, 1955
Psp124BI	GAGCTC	1 cut(s)	35
Psp6I	CCWGG	4 cut(s)	263, 464, 1054, 1555
PspFI	CCCAGC	1 cut(s)	496
PspGI	CCWGG	4 cut(s)	263, 464, 1054, 1555
PspN4I	GGNNCC	5 cut(s)	175, 238, 304, 414, 1353
PspPI	GGNCC	4 cut(s)	174, 746, 858, 1419
PsuI	RGATCY	2 cut(s)	302, 1328
PvuII	CAGCTG	1 cut(s)	484
RsaI	GTAC	4 cut(s)	262, 717, 1467, 1900
RsaNI	GTAC	4 cut(s)	261, 716, 1466, 1899
RseI	CAYNNNNRTG	3 cut(s)	105, 1431, 1979
SacI	GAGCTC	1 cut(s)	35
SapI	GCTCTTC	1 cut(s)	972
SaqAI	TTAA	7 cut(s)	378, 624, 761, 840, 1197, 1340, 1692
SatI	GCNGC	5 cut(s)	325, 482, 1237, 1853, 1906
Sau3AI	GATC	7 cut(s)	302, 403, 666, 673, 994, 1328, 1939
Sau96I	GGNCC	4 cut(s)	174, 746, 858, 1419
SchI	GAGTC	3 cut(s)	393, 825, 1099
ScrFI	CCNGG	5 cut(s)	47, 265, 466, 1056, 1557
SduI	GDGCHC	5 cut(s)	35, 90, 294, 394, 1054
SexAI	ACCWGGT	2 cut(s)	263, 1054
SfaNI	GCATC	7 cut(s)	254, 961, 1048, 1238, 1248, 1385, 1465
SinI	GGWCC	2 cut(s)	174, 746
SmiMI	CAYNNNNRTG	3 cut(s)	105, 1431, 1979
SmlI	CTYRAG	1 cut(s)	894
SmoI	CTYRAG	1 cut(s)	894
SseBI	AGGCCT	1 cut(s)	1648
SsiI	CCGC	6 cut(s)	11, 58, 325, 880, 974, 1236
SspI	AATATT	2 cut(s)	566, 1594
SspMI	CTAG	6 cut(s)	21, 224, 276, 1023, 1713, 1887
SstI	GAGCTC	1 cut(s)	35
StuI	AGGCCT	1 cut(s)	1648
StyD4I	CCNGG	5 cut(s)	45, 263, 464, 1054, 1555
StyI	CCWWGG	3 cut(s)	416, 574, 1974
TaaI	ACNGT	8 cut(s)	523, 647, 746, 757, 803, 837, 1106, 1659
TaiI	ACGT	1 cut(s)	80
TaqI	TCGA	2 cut(s)	1604, 1960
TaqII	GACCGA	1 cut(s)	191
TatI	WGTACW	2 cut(s)	715, 1898
TauI	GCSGC	2 cut(s)	327, 1239
TfiI	GAWTC	3 cut(s)	1169, 1436, 1916
Tru1I	TTAA	7 cut(s)	378, 624, 761, 840, 1197, 1340, 1692
Tru9I	TTAA	7 cut(s)	378, 624, 761, 840, 1197, 1340, 1692
TscAI	CASTG	3 cut(s)	299, 394, 1187
TseFI	GTSAC	2 cut(s)	73, 98
TseI	GCWGC	3 cut(s)	481, 1852, 1905
Tsp45I	GTSAC	2 cut(s)	73, 98
TspDTI	ATGAA	2 cut(s)	612, 1736
TspGWI	ACGGA	1 cut(s)	377
TspRI	CASTG	3 cut(s)	299, 394, 1187
VneI	GTGCAC	2 cut(s)	290, 1050
VpaK11BI	GGWCC	2 cut(s)	174, 746
XapI	RAATTY	4 cut(s)	340, 436, 1760, 1795
XbaI	TCTAGA	1 cut(s)	223
XceI	RCATGY	4 cut(s)	199, 234, 595, 1959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1476
XmiI	GTMKAC	3 cut(s)	187, 543, 1548
XmnI	GAANNNNTTC	3 cut(s)	156, 1173, 1350
XspI	CTAG	6 cut(s)	21, 224, 276, 1023, 1713, 1887
Zsp2I	ATGCAT	2 cut(s)	247, 1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.