Agenet domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 920 |
| Acc36I | ACCTGC | 1 cut(s) | 679 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 350, 420, 1069 |
| AccI | GTMKAC | 1 cut(s) | 1157 |
| AciI | CCGC | 1 cut(s) | 1378 |
| AclWI | GGATC | 5 cut(s) | 988, 1318, 1331, 1381, 1572 |
| AcoI | YGGCCR | 3 cut(s) | 376, 783, 1391 |
| AcsI | RAATTY | 1 cut(s) | 170 |
| AcuI | CTGAAG | 2 cut(s) | 1070, 1884 |
| AfaI | GTAC | 7 cut(s) | 127, 566, 792, 1237, 1629, 1747, 1861 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 350, 420, 937, 1069, 1405 |
| AflIII | ACRYGT | 3 cut(s) | 147, 440, 1753 |
| AjnI | CCWGG | 3 cut(s) | 618, 1528, 2020 |
| Alw21I | GWGCWC | 2 cut(s) | 42, 186 |
| Alw26I | GTCTC | 1 cut(s) | 1111 |
| Alw44I | GTGCAC | 1 cut(s) | 182 |
| AlwI | GGATC | 5 cut(s) | 988, 1318, 1331, 1381, 1572 |
| Ama87I | CYCGRG | 2 cut(s) | 1012, 1427 |
| AoxI | GGCC | 6 cut(s) | 376, 783, 1004, 1375, 1391, 1990 |
| ApaLI | GTGCAC | 1 cut(s) | 182 |
| ApeKI | GCWGC | 5 cut(s) | 271, 1022, 1221, 1439, 1497 |
| ApoI | RAATTY | 1 cut(s) | 170 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AspA2I | CCTAGG | 1 cut(s) | 770 |
| AspS9I | GGNCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| AsuHPI | GGTGA | 9 cut(s) | 291, 647, 838, 1276, 1517, 1544, 1904, 1979, 1991 |
| AvaI | CYCGRG | 2 cut(s) | 1012, 1427 |
| AvaII | GGWCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| AvrII | CCTAGG | 1 cut(s) | 770 |
| AxyI | CCTNAGG | 1 cut(s) | 1404 |
| BaeGI | GKGCMC | 2 cut(s) | 186, 364 |
| BalI | TGGCCA | 1 cut(s) | 785 |
| BamHI | GGATCC | 1 cut(s) | 1323 |
| BbsI | GAAGAC | 1 cut(s) | 576 |
| Bbv12I | GWGCWC | 2 cut(s) | 42, 186 |
| BbvI | GCAGC | 5 cut(s) | 283, 1034, 1208, 1426, 1509 |
| BccI | CCATC | 6 cut(s) | 476, 707, 1063, 1457, 1703, 1849 |
| BceAI | ACGGC | 1 cut(s) | 363 |
| BciT130I | CCWGG | 3 cut(s) | 620, 1530, 2022 |
| BcoDI | GTCTC | 1 cut(s) | 1111 |
| BfaI | CTAG | 4 cut(s) | 771, 993, 1109, 1373 |
| BfmI | CTRYAG | 1 cut(s) | 475 |
| BfuAI | ACCTGC | 1 cut(s) | 679 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1998 |
| BglII | AGATCT | 1 cut(s) | 286 |
| BisI | GCNGC | 6 cut(s) | 272, 1023, 1222, 1378, 1440, 1498 |
| BlnI | CCTAGG | 1 cut(s) | 770 |
| BlpI | GCTNAGC | 1 cut(s) | 757 |
| BlsI | GCNGC | 6 cut(s) | 273, 1024, 1223, 1379, 1441, 1499 |
| BmcAI | AGTACT | 1 cut(s) | 1747 |
| Bme1390I | CCNGG | 3 cut(s) | 620, 1530, 2022 |
| Bme18I | GGWCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| BmeT110I | CYCGRG | 2 cut(s) | 1012, 1427 |
| BmgT120I | GGNCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| BmiI | GGNNCC | 5 cut(s) | 891, 892, 957, 1325, 1595 |
| BmrFI | CCNGG | 3 cut(s) | 620, 1530, 2022 |
| BmsI | GCATC | 6 cut(s) | 1378, 1438, 1771, 1789, 1793, 1885 |
| BpiI | GAAGAC | 1 cut(s) | 576 |
| BpmI | CTGGAG | 3 cut(s) | 120, 1509, 2004 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 757 |
| BpuEI | CTTGAG | 2 cut(s) | 440, 1334 |
| BsaJI | CCNNGG | 6 cut(s) | 373, 770, 1013, 1151, 1909, 2021 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 350, 420, 937, 1069, 1405 |
| Bse1I | ACTGG | 5 cut(s) | 1344, 1492, 1597, 1743, 1791 |
| Bse21I | CCTNAGG | 1 cut(s) | 1404 |
| BseBI | CCWGG | 3 cut(s) | 620, 1530, 2022 |
| BseDI | CCNNGG | 6 cut(s) | 373, 770, 1013, 1151, 1909, 2021 |
| BseGI | GGATG | 5 cut(s) | 487, 1307, 1786, 1909, 1963 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 350, 420, 937, 1069, 1405 |
| BseMII | CTCAG | 4 cut(s) | 120, 156, 903, 1559 |
| BseNI | ACTGG | 5 cut(s) | 1344, 1492, 1597, 1743, 1791 |
| BseRI | GAGGAG | 2 cut(s) | 148, 630 |
| BseSI | GKGCMC | 2 cut(s) | 186, 364 |
| BseXI | GCAGC | 5 cut(s) | 283, 1034, 1208, 1426, 1509 |
| BseYI | CCCAGC | 1 cut(s) | 1327 |
| BsgI | GTGCAG | 2 cut(s) | 707, 720 |
| BshFI | GGCC | 6 cut(s) | 378, 785, 1006, 1377, 1393, 1992 |
| BsiHKAI | GWGCWC | 2 cut(s) | 42, 186 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1012, 1427 |
| BsiSI | CCGG | 1 cut(s) | 1390 |
| BslFI | GGGAC | 6 cut(s) | 343, 414, 876, 1607, 1653, 1822 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 350, 420, 937, 1069, 1405 |
| BsmAI | GTCTC | 1 cut(s) | 1111 |
| BsmFI | GGGAC | 6 cut(s) | 343, 414, 876, 1607, 1653, 1822 |
| BsmI | GAATGC | 1 cut(s) | 470 |
| BsnI | GGCC | 6 cut(s) | 378, 785, 1006, 1377, 1393, 1992 |
| BsoBI | CYCGRG | 2 cut(s) | 1012, 1427 |
| Bsp1286I | GDGCHC | 3 cut(s) | 42, 186, 364 |
| Bsp1407I | TGTACA | 1 cut(s) | 1235 |
| Bsp143I | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 757 |
| Bsp19I | CCATGG | 1 cut(s) | 373 |
| BspACI | CCGC | 1 cut(s) | 1378 |
| BspANI | GGCC | 6 cut(s) | 378, 785, 1006, 1377, 1393, 1992 |
| BspCNI | CTCAG | 4 cut(s) | 121, 157, 904, 1560 |
| BspLI | GGNNCC | 5 cut(s) | 891, 892, 957, 1325, 1595 |
| BspMI | ACCTGC | 1 cut(s) | 679 |
| BspPI | GGATC | 5 cut(s) | 988, 1318, 1331, 1381, 1572 |
| BsrGI | TGTACA | 1 cut(s) | 1235 |
| BsrI | ACTGG | 5 cut(s) | 1344, 1492, 1597, 1743, 1791 |
| BssECI | CCNNGG | 6 cut(s) | 373, 770, 1013, 1151, 1909, 2021 |
| BssMI | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| BssNAI | GTATAC | 1 cut(s) | 1158 |
| BssT1I | CCWWGG | 4 cut(s) | 373, 770, 1151, 1909 |
| Bst1107I | GTATAC | 1 cut(s) | 1158 |
| Bst2UI | CCWGG | 3 cut(s) | 620, 1530, 2022 |
| Bst4CI | ACNGT | 7 cut(s) | 20, 68, 727, 1122, 1240, 1687, 1886 |
| Bst6I | CTCTTC | 3 cut(s) | 226, 1089, 1755 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1448 |
| BstAUI | TGTACA | 1 cut(s) | 1235 |
| BstC8I | GCNNGC | 1 cut(s) | 1395 |
| BstDEI | CTNAG | 8 cut(s) | 129, 165, 644, 757, 912, 984, 1404, 1568 |
| BstDSI | CCRYGG | 1 cut(s) | 373 |
| BstF5I | GGATG | 5 cut(s) | 487, 1307, 1786, 1909, 1963 |
| BstKTI | GATC | 6 cut(s) | 289, 868, 983, 1326, 1389, 1567 |
| BstMAI | GTCTC | 1 cut(s) | 1111 |
| BstMBI | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 268, 782, 1218, 1354, 1448, 1998 |
| BstNI | CCWGG | 3 cut(s) | 620, 1530, 2022 |
| BstNSI | RCATGY | 5 cut(s) | 151, 284, 444, 1555, 1757 |
| BstSCI | CCNGG | 3 cut(s) | 618, 1528, 2020 |
| BstSFI | CTRYAG | 1 cut(s) | 475 |
| BstSLI | GKGCMC | 2 cut(s) | 186, 364 |
| BstV1I | GCAGC | 5 cut(s) | 283, 1034, 1208, 1426, 1509 |
| BstV2I | GAAGAC | 1 cut(s) | 576 |
| BstX2I | RGATCY | 4 cut(s) | 286, 980, 1323, 1564 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 374, 1208 |
| BstYI | RGATCY | 4 cut(s) | 286, 980, 1323, 1564 |
| BstZ17I | GTATAC | 1 cut(s) | 1158 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1404 |
| BsuRI | GGCC | 6 cut(s) | 378, 785, 1006, 1377, 1393, 1992 |
| BtgI | CCRYGG | 1 cut(s) | 373 |
| BtsCI | GGATG | 5 cut(s) | 487, 1307, 1786, 1909, 1963 |
| BtsIMutI | CAGTG | 4 cut(s) | 16, 1485, 1604, 1683 |
| BveI | ACCTGC | 1 cut(s) | 679 |
| Cac8I | GCNNGC | 1 cut(s) | 1395 |
| Cfr13I | GGNCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| Csp6I | GTAC | 7 cut(s) | 126, 565, 791, 1236, 1628, 1746, 1860 |
| CviQI | GTAC | 7 cut(s) | 126, 565, 791, 1236, 1628, 1746, 1860 |
| DdeI | CTNAG | 8 cut(s) | 129, 165, 644, 757, 912, 984, 1404, 1568 |
| DpnI | GATC | 6 cut(s) | 288, 867, 982, 1325, 1388, 1566 |
| DpnII | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| DraI | TTTAAA | 2 cut(s) | 217, 814 |
| EaeI | YGGCCR | 3 cut(s) | 376, 783, 1391 |
| Eam1104I | CTCTTC | 3 cut(s) | 226, 1089, 1755 |
| EarI | CTCTTC | 3 cut(s) | 226, 1089, 1755 |
| Eco130I | CCWWGG | 4 cut(s) | 373, 770, 1151, 1909 |
| Eco32I | GATATC | 1 cut(s) | 1251 |
| Eco47I | GGWCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| Eco57I | CTGAAG | 2 cut(s) | 1070, 1884 |
| Eco81I | CCTNAGG | 1 cut(s) | 1404 |
| Eco88I | CYCGRG | 2 cut(s) | 1012, 1427 |
| EcoO109I | RGGNCCY | 1 cut(s) | 890 |
| EcoRII | CCWGG | 3 cut(s) | 618, 1528, 2020 |
| EcoRV | GATATC | 1 cut(s) | 1251 |
| EcoT14I | CCWWGG | 4 cut(s) | 373, 770, 1151, 1909 |
| EcoT22I | ATGCAT | 2 cut(s) | 1453, 1786 |
| ErhI | CCWWGG | 4 cut(s) | 373, 770, 1151, 1909 |
| FaqI | GGGAC | 6 cut(s) | 343, 414, 876, 1607, 1653, 1822 |
| FauNDI | CATATG | 1 cut(s) | 682 |
| FblI | GTMKAC | 1 cut(s) | 1157 |
| Fnu4HI | GCNGC | 6 cut(s) | 272, 1023, 1222, 1378, 1440, 1498 |
| FokI | GGATG | 5 cut(s) | 494, 1314, 1793, 1916, 1970 |
| Fsp4HI | GCNGC | 6 cut(s) | 272, 1023, 1222, 1378, 1440, 1498 |
| FspBI | CTAG | 4 cut(s) | 771, 993, 1109, 1373 |
| GluI | GCNGC | 6 cut(s) | 272, 1023, 1222, 1378, 1440, 1498 |
| GsaI | CCCAGC | 1 cut(s) | 1331 |
| GsuI | CTGGAG | 3 cut(s) | 120, 1509, 2004 |
| HaeIII | GGCC | 6 cut(s) | 378, 785, 1006, 1377, 1393, 1992 |
| HapII | CCGG | 1 cut(s) | 1390 |
| HincII | GTYRAC | 1 cut(s) | 1702 |
| HindII | GTYRAC | 1 cut(s) | 1702 |
| HindIII | AAGCTT | 4 cut(s) | 321, 1133, 1355, 1537 |
| HinfI | GANTC | 6 cut(s) | 92, 104, 296, 311, 331, 406 |
| HpaII | CCGG | 1 cut(s) | 1390 |
| HphI | GGTGA | 9 cut(s) | 291, 647, 838, 1276, 1517, 1544, 1904, 1979, 1991 |
| Hpy166II | GTNNAC | 8 cut(s) | 76, 184, 449, 740, 1158, 1236, 1683, 1702 |
| Hpy188I | TCNGA | 5 cut(s) | 166, 295, 913, 1089, 1569 |
| Hpy8I | GTNNAC | 8 cut(s) | 76, 184, 449, 740, 1158, 1236, 1683, 1702 |
| HpyAV | CCTTC | 8 cut(s) | 82, 996, 1292, 1469, 1749, 1859, 1982, 1991 |
| HpyCH4III | ACNGT | 7 cut(s) | 20, 68, 727, 1122, 1240, 1687, 1886 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 268, 782, 1218, 1354, 1448, 1998 |
| HpyF3I | CTNAG | 8 cut(s) | 129, 165, 644, 757, 912, 984, 1404, 1568 |
| KflI | GGGWCCC | 1 cut(s) | 890 |
| Kzo9I | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| LmnI | GCTCC | 2 cut(s) | 203, 1807 |
| Lsp1109I | GCAGC | 5 cut(s) | 283, 1034, 1208, 1426, 1509 |
| LweI | GCATC | 6 cut(s) | 1378, 1438, 1771, 1789, 1793, 1885 |
| MaeI | CTAG | 4 cut(s) | 771, 993, 1109, 1373 |
| MaeIII | GTNAC | 5 cut(s) | 14, 315, 634, 818, 2056 |
| MalI | GATC | 6 cut(s) | 288, 867, 982, 1325, 1388, 1566 |
| MboI | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| MboII | GAAGA | 9 cut(s) | 243, 569, 581, 953, 956, 1076, 1635, 1772, 1779 |
| MfeI | CAATTG | 2 cut(s) | 1443, 1948 |
| MflI | RGATCY | 4 cut(s) | 286, 980, 1323, 1564 |
| MhlI | GDGCHC | 3 cut(s) | 42, 186, 364 |
| MlsI | TGGCCA | 1 cut(s) | 785 |
| MluCI | AATT | 9 cut(s) | 170, 873, 950, 974, 1096, 1190, 1443, 1650, 1948 |
| MluNI | TGGCCA | 1 cut(s) | 785 |
| MlyI | GAGTC | 2 cut(s) | 325, 415 |
| Mox20I | TGGCCA | 1 cut(s) | 785 |
| Mph1103I | ATGCAT | 2 cut(s) | 1453, 1786 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MscI | TGGCCA | 1 cut(s) | 785 |
| MseI | TTAA | 7 cut(s) | 216, 501, 594, 731, 813, 1170, 1847 |
| MslI | CAYNNNNRTG | 4 cut(s) | 279, 439, 2006, 2054 |
| Msp20I | TGGCCA | 1 cut(s) | 785 |
| MspA1I | CMGCKG | 1 cut(s) | 1500 |
| MspI | CCGG | 1 cut(s) | 1390 |
| MspR9I | CCNGG | 3 cut(s) | 620, 1530, 2022 |
| MunI | CAATTG | 2 cut(s) | 1443, 1948 |
| Mva1269I | GAATGC | 1 cut(s) | 470 |
| MvaI | CCWGG | 3 cut(s) | 620, 1530, 2022 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 268, 782, 1218, 1354, 1448, 1998 |
| NcoI | CCATGG | 1 cut(s) | 373 |
| NdeI | CATATG | 1 cut(s) | 682 |
| NdeII | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| NlaIV | GGNNCC | 5 cut(s) | 891, 892, 957, 1325, 1595 |
| NmeAIII | GCCGAG | 1 cut(s) | 2018 |
| NmuCI | GTSAC | 3 cut(s) | 14, 315, 2056 |
| NsiI | ATGCAT | 2 cut(s) | 1453, 1786 |
| NspI | RCATGY | 5 cut(s) | 151, 284, 444, 1555, 1757 |
| PaeR7I | CTCGAG | 1 cut(s) | 1427 |
| PciI | ACATGT | 3 cut(s) | 147, 440, 1753 |
| PctI | GAATGC | 1 cut(s) | 470 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 4 cut(s) | 92, 104, 296, 311 |
| PflFI | GACNNNGTC | 2 cut(s) | 405, 1820 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 350, 420, 1069 |
| PkrI | GCNGC | 6 cut(s) | 273, 1024, 1223, 1379, 1441, 1499 |
| PleI | GAGTC | 2 cut(s) | 325, 414 |
| PpsI | GAGTC | 2 cut(s) | 325, 414 |
| PpuMI | RGGWCCY | 1 cut(s) | 890 |
| PscI | ACATGT | 3 cut(s) | 147, 440, 1753 |
| PsiI | TTATAA | 1 cut(s) | 920 |
| Psp5II | RGGWCCY | 1 cut(s) | 890 |
| Psp6I | CCWGG | 3 cut(s) | 618, 1528, 2020 |
| PspFI | CCCAGC | 1 cut(s) | 1327 |
| PspGI | CCWGG | 3 cut(s) | 618, 1528, 2020 |
| PspN4I | GGNNCC | 5 cut(s) | 891, 892, 957, 1325, 1595 |
| PspPI | GGNCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| PspPPI | RGGWCCY | 1 cut(s) | 890 |
| PsuI | RGATCY | 4 cut(s) | 286, 980, 1323, 1564 |
| PsyI | GACNNNGTC | 2 cut(s) | 405, 1820 |
| PvuII | CAGCTG | 1 cut(s) | 1500 |
| RsaI | GTAC | 7 cut(s) | 127, 566, 792, 1237, 1629, 1747, 1861 |
| RsaNI | GTAC | 7 cut(s) | 126, 565, 791, 1236, 1628, 1746, 1860 |
| RseI | CAYNNNNRTG | 4 cut(s) | 279, 439, 2006, 2054 |
| SaqAI | TTAA | 7 cut(s) | 216, 501, 594, 731, 813, 1170, 1847 |
| SatI | GCNGC | 6 cut(s) | 272, 1023, 1222, 1378, 1440, 1498 |
| Sau3AI | GATC | 6 cut(s) | 286, 865, 980, 1323, 1386, 1564 |
| Sau96I | GGNCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| ScaI | AGTACT | 1 cut(s) | 1747 |
| SchI | GAGTC | 2 cut(s) | 325, 415 |
| ScrFI | CCNGG | 3 cut(s) | 620, 1530, 2022 |
| SduI | GDGCHC | 3 cut(s) | 42, 186, 364 |
| SfaNI | GCATC | 6 cut(s) | 1378, 1438, 1771, 1789, 1793, 1885 |
| SfcI | CTRYAG | 1 cut(s) | 475 |
| Sfr274I | CTCGAG | 1 cut(s) | 1427 |
| SinI | GGWCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| SlaI | CTCGAG | 1 cut(s) | 1427 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 279, 439, 2006, 2054 |
| SmlI | CTYRAG | 3 cut(s) | 455, 1313, 1427 |
| SmoI | CTYRAG | 3 cut(s) | 455, 1313, 1427 |
| Sse9I | AATT | 9 cut(s) | 170, 873, 950, 974, 1096, 1190, 1443, 1650, 1948 |
| SsiI | CCGC | 1 cut(s) | 1378 |
| SspMI | CTAG | 4 cut(s) | 771, 993, 1109, 1373 |
| StyD4I | CCNGG | 3 cut(s) | 618, 1528, 2020 |
| StyI | CCWWGG | 4 cut(s) | 373, 770, 1151, 1909 |
| TaaI | ACNGT | 7 cut(s) | 20, 68, 727, 1122, 1240, 1687, 1886 |
| TaqI | TCGA | 2 cut(s) | 864, 1428 |
| TasI | AATT | 9 cut(s) | 170, 873, 950, 974, 1096, 1190, 1443, 1650, 1948 |
| TatI | WGTACW | 4 cut(s) | 790, 1235, 1627, 1745 |
| TauI | GCSGC | 1 cut(s) | 1380 |
| TfiI | GAWTC | 4 cut(s) | 92, 104, 296, 311 |
| Tru1I | TTAA | 7 cut(s) | 216, 501, 594, 731, 813, 1170, 1847 |
| Tru9I | TTAA | 7 cut(s) | 216, 501, 594, 731, 813, 1170, 1847 |
| TscAI | CASTG | 4 cut(s) | 23, 1492, 1604, 1690 |
| TseFI | GTSAC | 3 cut(s) | 14, 315, 2056 |
| TseI | GCWGC | 5 cut(s) | 271, 1022, 1221, 1439, 1497 |
| Tsp45I | GTSAC | 3 cut(s) | 14, 315, 2056 |
| TspDTI | ATGAA | 8 cut(s) | 362, 599, 661, 762, 866, 963, 1145, 2001 |
| TspGWI | ACGGA | 1 cut(s) | 201 |
| TspRI | CASTG | 4 cut(s) | 23, 1492, 1604, 1690 |
| Tth111I | GACNNNGTC | 2 cut(s) | 405, 1820 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 350, 420, 1069 |
| VneI | GTGCAC | 1 cut(s) | 182 |
| VpaK11BI | GGWCC | 5 cut(s) | 716, 890, 956, 1417, 1594 |
| XapI | RAATTY | 1 cut(s) | 170 |
| XceI | RCATGY | 5 cut(s) | 151, 284, 444, 1555, 1757 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 417 |
| XhoI | CTCGAG | 1 cut(s) | 1427 |
| XmaJI | CCTAGG | 1 cut(s) | 770 |
| XmiI | GTMKAC | 1 cut(s) | 1157 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 4 cut(s) | 771, 993, 1109, 1373 |
| ZrmI | AGTACT | 1 cut(s) | 1747 |
| Zsp2I | ATGCAT | 2 cut(s) | 1453, 1786 |