MD03G1186700.v1.1

Agenet domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
25509498 .. 25514747
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1186700.v1.1.491

Sequence Viewer

Length: 2325 bp
ATGCCTGGAGATGGTCGCTTTTTCGTGGAGTGGAAAGAACAGTTTGTTTCGCAGGAGAGGGGCAACCGTGTGGTTCACTATTTCTTAAAGGATTCTTCCGGAGAATCCATTCTTGCAGTTGTGGGTACTGAGAGGAGTGTTAGGCACATGTTCTATGTTGTTTCTGAGGAGTTTTTGCAAGCGCACGGAAACGAGAGCTCCAATAGTGCTAACTATAAATGGAGGTCAAGAAGGGAAGTTGTGGATTGGCTTACATCTATGCTGTCAAAGCAGCATGTACGTGGAGATCTGTCCGAATCACCCCAACATGATTCATCACAAGCTTTGTGGAGTCCCGAACATCCAATGAAAGGAGTTAGTGGTCACCAGGGCCGTCTTTCAACGACCTTGAAGGGACACAATCCAGACATTGTTTGGTCAGGTGTTGCATGGACATGTGGTAAACAGCTCAAGCATTTCCCTGCATTCTGTAGGGATGGAACTACAATAGTGATTAAGTCCTTTGTCTTTGTCATGGCAAAGGGAGAAAATCACTATGTTGCTTATATGGAGGATATGTACGAAGACAAGAGGGGTCAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGGTTAACTCCTGTAAGAAATCCTCACCCAAAGGAAGTTTTCATCACACCATATGTGCAGGTCATTAGTGCAGAATGTGTTGATGGTCCTGCAACAGTCTTAACTTGTGAACATTATGAAAAATGCTTAGCTCTGTTTCCTCAGGCTTTATTGGCCAAAGTACATCTATGCTATAGGCAGTTTAGAAGTAACAAGGTGAAGCCATTTGATTTGAGTAAAATGCATGGCTATTTTGATCAGCCAATTCTCTCTTGTTTCGGTCTCGAAGTTTCCAAAAAATCTGAGTTTATAAGTGATAGCTTGAATGGGGAAGAAGATGAATTGGGTCCAAGTGACTATGTAAAGCAAGGATCTAAGAGGACTAGAAGTGGAAGGCCATGTCAGAGGTTTTCAACTGGTCGTTCAAGAGCAAGAAGTTCTACAATAGATAACCAGATGATGACATATAGACCTCAGAACCCAAACTATGGTTTACTAGACAAGCGGTTGTTGTCCATGAAGCTTGTTGATTGTCAGCCTTGGTATACTCCACTATTTAAGGTTGACGAAAAGATAGAATTGCTTTGCCAAGATAGTGGCATTCGAGGCTGCTGGTTTAGGTGTACAGTCTTGCAGATAACACGAAAACAGATGAAAGTTCAATACGAGGATTTGCAAGACGAGGAAGGAAGTGGCAATCTTGAGGAATGGATCCCAGCTTTTAGATTGGCTATGCCTGATAAACTTGGCATAAGGCGTCTAGGCCGCCCAATGGTCCGGCCAGCCCCTCCTAAGGAACAAATGGGCCTTGCCCTTGAGGTTGGGGTTGCAGTTGATGCATGGTGGAGCGATGGCTGGTGGGAAGGGATTATAGCTGAAGTTGGCAGCTGTGGTGACACCTTTCAAGTTTTCATTCCTGGTGAAAGCTTACTGTTGAACATGCACAAAAATGATCTAAGAATATCCAGAGATTGGTTTAGGGACGAGTGGGTTGATGTTGAGGCAAATCCTGATGTACTATCAGCCATATCTTCAACAATTAGCTCACGTACTCGTCCCTTTACGTTGCCCGTGGTTGTGAAAGATGTCGACTCTGATGGGTTTGCTTTGTCGTATGTTGAAGTTCCTTCTAGTACTAAACATGTGGAAGAGGAAAAACTGAACTTGGCCACGTCATATATTGAAGTTCCTTCTAGTACTAAACACGTGGAAGAAGAACAACAGAACTTAGCCATATCTGCCAGTTTTGAAGCTCCTGATAATATGGACTTGGACAGTGATAGGAAGTCACCATCACTAAACGATGTTGGTACTGAAGGTGTTGATGTCAACGACAGTTGTGGTGATGTACAGGATGTCCAAGGTAATGATGTTGATGACAACAAGGGTGATAAAATTGCCGAGGATGACAAAGGTGACAACGGCGGTGGTGATGGCAAAAACAATGGTCATTATGAGGGTCAAGAAAGTATGGAAGTGTTTGAAACTGCCTGTATTGAATGTGTTGACGGGAGCGACAGTTGTGGTGATGTACATGATGTCCAAGTTAATGAAGTTGATGACGACAAAGATGACAACAATGGCGAGGATGACAAACATGACAACGACAATGATGAGAGCAAAAACAGTGGTCCTGATGAGGGCCAAGAAGGCATGGAGGTGTTTGAAACTGCTGGGGAGGGGAGCCCGAAAGCAGTAGAAATCATGGAAGTGATTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

775

Amino Acids

87.1

Weight (kDa)

4.93

Isoelectric Point (pI)

47.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 167 - 250 8e-08 BAH domain
Agenet PF05641 391 - 465 4e-17 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 914
Acc36I ACCTGC 1 cut(s) 673
AccB7I CCANNNNNTGG 2 cut(s) 1091, 1575
AccI GTMKAC 2 cut(s) 1148, 1692
AccIII TCCGGA 1 cut(s) 98
AciI CCGC 3 cut(s) 1108, 1369, 2028
AclWI GGATC 3 cut(s) 982, 1309, 1322
AcoI YGGCCR 3 cut(s) 777, 1382, 1770
AcuI CTGAAG 2 cut(s) 1500, 1938
AcvI CACGTG 1 cut(s) 1810
AcyI GRCGYC 1 cut(s) 1360
AfiI CCNNNNNNNGG 8 cut(s) 11, 350, 613, 1091, 1375, 1396, 1575, 2243
AflIII ACRYGT 4 cut(s) 147, 434, 1744, 1807
AjiI CACGTC 1 cut(s) 1776
AjnI CCWGG 3 cut(s) 4, 366, 1519
Alw21I GWGCWC 1 cut(s) 200
Alw26I GTCTC 1 cut(s) 890
AlwI GGATC 3 cut(s) 982, 1309, 1322
Aor13HI TCCGGA 1 cut(s) 98
AoxI GGCC 8 cut(s) 370, 777, 998, 1366, 1382, 1408, 1770, 2245
ApeKI GCWGC 3 cut(s) 271, 1212, 1488
Asp700I GAANNNNTTC 1 cut(s) 108
AspLEI GCGC 1 cut(s) 184
AspS9I GGNCC 7 cut(s) 370, 710, 950, 1378, 1408, 2234, 2245
AvaII GGWCC 4 cut(s) 710, 950, 1378, 2234
AxyI CCTNAGG 2 cut(s) 765, 1395
BalI TGGCCA 2 cut(s) 779, 1772
BamHI GGATCC 1 cut(s) 1314
BanII GRGCYC 2 cut(s) 200, 2291
BbrPI CACGTG 1 cut(s) 1810
BbsI GAAGAC 1 cut(s) 570
Bbv12I GWGCWC 1 cut(s) 200
BbvI GCAGC 3 cut(s) 283, 1199, 1500
BccI CCATC 7 cut(s) 5, 470, 701, 1448, 1694, 1903, 2030
BceAI ACGGC 2 cut(s) 357, 2041
BciT130I CCWGG 3 cut(s) 6, 368, 1521
BclI TGATCA 1 cut(s) 859
BcoDI GTCTC 1 cut(s) 890
BfaI CTAG 5 cut(s) 987, 1100, 1364, 1734, 1797
BfmI CTRYAG 2 cut(s) 469, 796
BfuAI ACCTGC 1 cut(s) 673
BglI GCCNNNNNGGC 1 cut(s) 2253
BglII AGATCT 1 cut(s) 286
BisI GCNGC 4 cut(s) 272, 1213, 1369, 1489
BlpI GCTNAGC 1 cut(s) 751
BlsI GCNGC 4 cut(s) 273, 1214, 1370, 1490
BmcAI AGTACT 2 cut(s) 1738, 1801
Bme1390I CCNGG 3 cut(s) 6, 368, 1521
Bme18I GGWCC 4 cut(s) 710, 950, 1378, 2234
BmgBI CACGTC 1 cut(s) 1776
BmgT120I GGNCC 7 cut(s) 370, 710, 950, 1378, 1408, 2234, 2245
BmiI GGNNCC 3 cut(s) 951, 1316, 2288
BmrFI CCNGG 3 cut(s) 6, 368, 1521
BmsI GCATC 1 cut(s) 1429
BpiI GAAGAC 1 cut(s) 570
BpmI CTGGAG 1 cut(s) 27
Bpu1102I GCTNAGC 1 cut(s) 751
BpuEI CTTGAG 3 cut(s) 434, 1325, 1439
BsaAI YACGTR 3 cut(s) 281, 1652, 1810
BsaHI GRCGYC 1 cut(s) 1360
BsaI GGTCTC 1 cut(s) 890
BsaJI CCNNGG 5 cut(s) 367, 1142, 1674, 1963, 2004
BsaWI WCCGGW 1 cut(s) 98
BsaXI ACNNNNNCTCC 6 cut(s) 182, 212, 542, 572, 2107, 2137
Bsc4I CCNNNNNNNGG 8 cut(s) 11, 350, 613, 1091, 1375, 1396, 1575, 2243
Bse1I ACTGG 2 cut(s) 1024, 1845
Bse21I CCTNAGG 2 cut(s) 765, 1395
BseAI TCCGGA 1 cut(s) 98
BseBI CCWGG 3 cut(s) 6, 368, 1521
BseDI CCNNGG 5 cut(s) 367, 1142, 1674, 1963, 2004
BseGI GGATG 5 cut(s) 340, 481, 1963, 2014, 2197
BseLI CCNNNNNNNGG 8 cut(s) 11, 350, 613, 1091, 1375, 1396, 1575, 2243
BseMII CTCAG 5 cut(s) 120, 156, 779, 897, 1091
BseNI ACTGG 2 cut(s) 1024, 1845
BseRI GAGGAG 2 cut(s) 148, 182
BseXI GCAGC 3 cut(s) 283, 1199, 1500
BseYI CCCAGC 2 cut(s) 1318, 2276
BsgI GTGCAG 2 cut(s) 701, 714
BshFI GGCC 8 cut(s) 372, 779, 1000, 1368, 1384, 1410, 1772, 2247
BsiHKAI GWGCWC 1 cut(s) 200
BsiSI CCGG 2 cut(s) 99, 1381
BslFI GGGAC 4 cut(s) 318, 408, 1598, 1644
BslI CCNNNNNNNGG 8 cut(s) 11, 350, 613, 1091, 1375, 1396, 1575, 2243
BsmAI GTCTC 1 cut(s) 890
BsmFI GGGAC 4 cut(s) 318, 408, 1598, 1644
BsmI GAATGC 2 cut(s) 464, 1203
BsnI GGCC 8 cut(s) 372, 779, 1000, 1368, 1384, 1410, 1772, 2247
Bso31I GGTCTC 1 cut(s) 890
Bsp1286I GDGCHC 2 cut(s) 200, 2291
Bsp13I TCCGGA 1 cut(s) 98
Bsp1407I TGTACA 3 cut(s) 1226, 1951, 2134
Bsp143I GATC 5 cut(s) 286, 859, 974, 1314, 1555
Bsp1720I GCTNAGC 1 cut(s) 751
BspACI CCGC 3 cut(s) 1108, 1369, 2028
BspANI GGCC 8 cut(s) 372, 779, 1000, 1368, 1384, 1410, 1772, 2247
BspCNI CTCAG 5 cut(s) 121, 157, 778, 898, 1090
BspEI TCCGGA 1 cut(s) 98
BspLI GGNNCC 3 cut(s) 951, 1316, 2288
BspMI ACCTGC 1 cut(s) 673
BspPI GGATC 3 cut(s) 982, 1309, 1322
BspTNI GGTCTC 1 cut(s) 890
BsrGI TGTACA 3 cut(s) 1226, 1951, 2134
BsrI ACTGG 2 cut(s) 1024, 1845
BssECI CCNNGG 5 cut(s) 367, 1142, 1674, 1963, 2004
BssMI GATC 5 cut(s) 286, 859, 974, 1314, 1555
BssNAI GTATAC 1 cut(s) 1149
BssNI GRCGYC 1 cut(s) 1360
BssT1I CCWWGG 2 cut(s) 1142, 1963
Bst1107I GTATAC 1 cut(s) 1149
Bst2UI CCWGG 3 cut(s) 6, 368, 1521
Bst4CI ACNGT 9 cut(s) 42, 68, 721, 1231, 1536, 1880, 1940, 2123, 2231
Bst6I CTCTTC 1 cut(s) 1746
BstACI GRCGYC 1 cut(s) 1360
BstAPI GCANNNNNTGC 1 cut(s) 1439
BstAUI TGTACA 3 cut(s) 1226, 1951, 2134
BstBAI YACGTR 3 cut(s) 281, 1652, 1810
BstC8I GCNNGC 2 cut(s) 180, 1386
BstDSI CCRYGG 1 cut(s) 1674
BstEII GGTNACC 1 cut(s) 362
BstF5I GGATG 5 cut(s) 340, 481, 1963, 2014, 2197
BstHHI GCGC 1 cut(s) 184
BstKTI GATC 5 cut(s) 289, 862, 977, 1317, 1558
BstMAI GTCTC 1 cut(s) 890
BstMBI GATC 5 cut(s) 286, 859, 974, 1314, 1555
BstMWI GCNNNNNNNGC 6 cut(s) 268, 776, 1209, 1439, 1841, 2253
BstNI CCWGG 3 cut(s) 6, 368, 1521
BstNSI RCATGY 5 cut(s) 151, 278, 438, 1546, 1748
BstPI GGTNACC 1 cut(s) 362
BstSCI CCNGG 3 cut(s) 4, 366, 1519
BstSFI CTRYAG 2 cut(s) 469, 796
BstV1I GCAGC 3 cut(s) 283, 1199, 1500
BstV2I GAAGAC 1 cut(s) 570
BstX2I RGATCY 3 cut(s) 286, 974, 1314
BstXI CCANNNNNNTGG 1 cut(s) 1199
BstYI RGATCY 3 cut(s) 286, 974, 1314
BstZ17I GTATAC 1 cut(s) 1149
Bsu36I CCTNAGG 2 cut(s) 765, 1395
BsuRI GGCC 8 cut(s) 372, 779, 1000, 1368, 1384, 1410, 1772, 2247
BtgI CCRYGG 1 cut(s) 1674
BtgZI GCGATG 1 cut(s) 1467
BtrI CACGTC 1 cut(s) 1776
BtsCI GGATG 5 cut(s) 340, 481, 1963, 2014, 2197
BtsIMutI CAGTG 2 cut(s) 1885, 2236
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 2 cut(s) 180, 1386
CfoI GCGC 1 cut(s) 184
Cfr13I GGNCC 7 cut(s) 370, 710, 950, 1378, 1408, 2234, 2245
CseI GACGC 1 cut(s) 1349
CspCI CAANNNNNGTGG 6 cut(s) 308, 343, 2011, 2046, 2212, 2247
DpnI GATC 5 cut(s) 288, 861, 976, 1316, 1557
DpnII GATC 5 cut(s) 286, 859, 974, 1314, 1555
EaeI YGGCCR 3 cut(s) 777, 1382, 1770
Eam1104I CTCTTC 1 cut(s) 1746
EarI CTCTTC 1 cut(s) 1746
Ecl136II GAGCTC 1 cut(s) 198
Eco130I CCWWGG 2 cut(s) 1142, 1963
Eco24I GRGCYC 2 cut(s) 200, 2291
Eco31I GGTCTC 1 cut(s) 890
Eco47I GGWCC 4 cut(s) 710, 950, 1378, 2234
Eco53kI GAGCTC 1 cut(s) 198
Eco57I CTGAAG 2 cut(s) 1500, 1938
Eco72I CACGTG 1 cut(s) 1810
Eco81I CCTNAGG 2 cut(s) 765, 1395
Eco91I GGTNACC 1 cut(s) 362
EcoICRI GAGCTC 1 cut(s) 198
EcoO65I GGTNACC 1 cut(s) 362
EcoRII CCWGG 3 cut(s) 4, 366, 1519
EcoT14I CCWWGG 2 cut(s) 1142, 1963
EcoT22I ATGCAT 2 cut(s) 849, 1444
EcoT38I GRGCYC 2 cut(s) 200, 2291
ErhI CCWWGG 2 cut(s) 1142, 1963
FaqI GGGAC 4 cut(s) 318, 408, 1598, 1644
FauNDI CATATG 1 cut(s) 676
FbaI TGATCA 1 cut(s) 859
FblI GTMKAC 2 cut(s) 1148, 1692
Fnu4HI GCNGC 4 cut(s) 272, 1213, 1369, 1489
FokI GGATG 5 cut(s) 327, 488, 1970, 2021, 2204
FriOI GRGCYC 2 cut(s) 200, 2291
Fsp4HI GCNGC 4 cut(s) 272, 1213, 1369, 1489
FspBI CTAG 5 cut(s) 987, 1100, 1364, 1734, 1797
GlaI GCGC 1 cut(s) 183
GluI GCNGC 4 cut(s) 272, 1213, 1369, 1489
GsaI CCCAGC 2 cut(s) 1322, 2280
GsuI CTGGAG 1 cut(s) 27
HaeIII GGCC 8 cut(s) 372, 779, 1000, 1368, 1384, 1410, 1772, 2247
HapII CCGG 2 cut(s) 99, 1381
HgaI GACGC 1 cut(s) 1349
HhaI GCGC 1 cut(s) 184
Hin1I GRCGYC 1 cut(s) 1360
Hin6I GCGC 1 cut(s) 182
HinP1I GCGC 1 cut(s) 182
HincII GTYRAC 5 cut(s) 630, 1168, 1693, 1933, 2110
HindII GTYRAC 5 cut(s) 630, 1168, 1693, 1933, 2110
HindIII AAGCTT 3 cut(s) 321, 1124, 1528
HinfI GANTC 6 cut(s) 92, 104, 296, 311, 331, 1694
HpaI GTTAAC 1 cut(s) 630
HpaII CCGG 2 cut(s) 99, 1381
Hpy188I TCNGA 7 cut(s) 166, 295, 579, 907, 1008, 1080, 1699
HpyAV CCTTC 9 cut(s) 225, 385, 990, 1283, 1460, 1740, 1803, 1913, 2246
HpyCH4III ACNGT 9 cut(s) 42, 68, 721, 1231, 1536, 1880, 1940, 2123, 2231
HpyCH4IV ACGT 5 cut(s) 280, 1651, 1667, 1775, 1809
HpyF10VI GCNNNNNNNGC 6 cut(s) 268, 776, 1209, 1439, 1841, 2253
HpySE526I ACGT 5 cut(s) 280, 1651, 1667, 1775, 1809
Hsp92I GRCGYC 1 cut(s) 1360
HspAI GCGC 1 cut(s) 182
Kpn2I TCCGGA 1 cut(s) 98
Ksp22I TGATCA 1 cut(s) 859
KspAI GTTAAC 1 cut(s) 630
Kzo9I GATC 5 cut(s) 286, 859, 974, 1314, 1555
LmnI GCTCC 5 cut(s) 203, 1449, 1861, 2115, 2286
Lsp1109I GCAGC 3 cut(s) 283, 1199, 1500
LweI GCATC 1 cut(s) 1429
MaeI CTAG 5 cut(s) 987, 1100, 1364, 1734, 1797
MaeII ACGT 5 cut(s) 280, 1651, 1667, 1775, 1809
MaeIII GTNAC 6 cut(s) 362, 812, 956, 1496, 1890, 2018
MalI GATC 5 cut(s) 288, 861, 976, 1316, 1557
MboI GATC 5 cut(s) 286, 859, 974, 1314, 1555
MboII GAAGA 8 cut(s) 87, 575, 947, 950, 1626, 1763, 1826, 1829
MflI RGATCY 3 cut(s) 286, 974, 1314
MhlI GDGCHC 2 cut(s) 200, 2291
MlsI TGGCCA 2 cut(s) 779, 1772
MluCI AATT 5 cut(s) 867, 944, 1181, 1641, 1998
MluNI TGGCCA 2 cut(s) 779, 1772
MlyI GAGTC 2 cut(s) 340, 1688
Mox20I TGGCCA 2 cut(s) 779, 1772
Mph1103I ATGCAT 2 cut(s) 849, 1444
MroI TCCGGA 1 cut(s) 98
MroXI GAANNNNTTC 1 cut(s) 108
MscI TGGCCA 2 cut(s) 779, 1772
MseI TTAA 6 cut(s) 86, 495, 629, 725, 1161, 2151
MslI CAYNNNNRTG 5 cut(s) 279, 433, 1551, 2261, 2312
Msp20I TGGCCA 2 cut(s) 779, 1772
MspA1I CMGCKG 1 cut(s) 1491
MspI CCGG 2 cut(s) 99, 1381
MspR9I CCNGG 3 cut(s) 6, 368, 1521
Mva1269I GAATGC 2 cut(s) 464, 1203
MvaI CCWGG 3 cut(s) 6, 368, 1521
MwoI GCNNNNNNNGC 6 cut(s) 268, 776, 1209, 1439, 1841, 2253
NdeI CATATG 1 cut(s) 676
NdeII GATC 5 cut(s) 286, 859, 974, 1314, 1555
NlaIV GGNNCC 3 cut(s) 951, 1316, 2288
NmeAIII GCCGAG 1 cut(s) 2029
NmuCI GTSAC 5 cut(s) 362, 956, 1496, 1890, 2018
NsiI ATGCAT 2 cut(s) 849, 1444
NspI RCATGY 5 cut(s) 151, 278, 438, 1546, 1748
PciI ACATGT 3 cut(s) 147, 434, 1744
PctI GAATGC 2 cut(s) 464, 1203
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 4 cut(s) 92, 104, 296, 311
PflMI CCANNNNNTGG 2 cut(s) 1091, 1575
PkrI GCNGC 4 cut(s) 273, 1214, 1370, 1490
PleI GAGTC 2 cut(s) 339, 1688
PmaCI CACGTG 1 cut(s) 1810
PmlI CACGTG 1 cut(s) 1810
PpsI GAGTC 2 cut(s) 339, 1688
Ppu21I YACGTR 3 cut(s) 281, 1652, 1810
PscI ACATGT 3 cut(s) 147, 434, 1744
PsiI TTATAA 1 cut(s) 914
Psp124BI GAGCTC 1 cut(s) 200
Psp6I CCWGG 3 cut(s) 4, 366, 1519
PspCI CACGTG 1 cut(s) 1810
PspEI GGTNACC 1 cut(s) 362
PspFI CCCAGC 2 cut(s) 1318, 2276
PspGI CCWGG 3 cut(s) 4, 366, 1519
PspN4I GGNNCC 3 cut(s) 951, 1316, 2288
PspPI GGNCC 7 cut(s) 370, 710, 950, 1378, 1408, 2234, 2245
PsuI RGATCY 3 cut(s) 286, 974, 1314
PvuII CAGCTG 1 cut(s) 1491
RseI CAYNNNNRTG 5 cut(s) 279, 433, 1551, 2261, 2312
SacI GAGCTC 1 cut(s) 200
SalI GTCGAC 1 cut(s) 1691
SaqAI TTAA 6 cut(s) 86, 495, 629, 725, 1161, 2151
SatI GCNGC 4 cut(s) 272, 1213, 1369, 1489
Sau3AI GATC 5 cut(s) 286, 859, 974, 1314, 1555
Sau96I GGNCC 7 cut(s) 370, 710, 950, 1378, 1408, 2234, 2245
ScaI AGTACT 2 cut(s) 1738, 1801
SchI GAGTC 2 cut(s) 340, 1688
ScrFI CCNGG 3 cut(s) 6, 368, 1521
SduI GDGCHC 2 cut(s) 200, 2291
SfaNI GCATC 1 cut(s) 1429
SfcI CTRYAG 2 cut(s) 469, 796
SinI GGWCC 4 cut(s) 710, 950, 1378, 2234
SmiMI CAYNNNNRTG 5 cut(s) 279, 433, 1551, 2261, 2312
SmlI CTYRAG 3 cut(s) 449, 1304, 1418
SmoI CTYRAG 3 cut(s) 449, 1304, 1418
Sse9I AATT 5 cut(s) 867, 944, 1181, 1641, 1998
SsiI CCGC 3 cut(s) 1108, 1369, 2028
SspMI CTAG 5 cut(s) 987, 1100, 1364, 1734, 1797
SstI GAGCTC 1 cut(s) 200
StyD4I CCNGG 3 cut(s) 4, 366, 1519
StyI CCWWGG 2 cut(s) 1142, 1963
TaaI ACNGT 9 cut(s) 42, 68, 721, 1231, 1536, 1880, 1940, 2123, 2231
TaiI ACGT 5 cut(s) 283, 1654, 1670, 1778, 1812
TaqI TCGA 3 cut(s) 888, 1207, 1692
TaqII GACCGA 1 cut(s) 872
TasI AATT 5 cut(s) 867, 944, 1181, 1641, 1998
TatI WGTACW 7 cut(s) 784, 1226, 1618, 1736, 1799, 1951, 2134
TauI GCSGC 1 cut(s) 1371
TfiI GAWTC 4 cut(s) 92, 104, 296, 311
Tru1I TTAA 6 cut(s) 86, 495, 629, 725, 1161, 2151
Tru9I TTAA 6 cut(s) 86, 495, 629, 725, 1161, 2151
TscAI CASTG 2 cut(s) 1885, 2236
TseFI GTSAC 5 cut(s) 362, 956, 1496, 1890, 2018
TseI GCWGC 3 cut(s) 271, 1212, 1488
Tsp45I GTSAC 5 cut(s) 362, 956, 1496, 1890, 2018
TspGWI ACGGA 1 cut(s) 201
TspRI CASTG 2 cut(s) 1885, 2236
Van91I CCANNNNNTGG 2 cut(s) 1091, 1575
VpaK11BI GGWCC 4 cut(s) 710, 950, 1378, 2234
XceI RCATGY 5 cut(s) 151, 278, 438, 1546, 1748
XcmI CCANNNNNNNNNTGG 1 cut(s) 411
XmiI GTMKAC 2 cut(s) 1148, 1692
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 5 cut(s) 987, 1100, 1364, 1734, 1797
ZrmI AGTACT 2 cut(s) 1738, 1801
Zsp2I ATGCAT 2 cut(s) 849, 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.