Rroxscaffold_1G00026510

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0001648
Physical Location & Seq
Reverse (-)
33382268 .. 33390553
8286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00026510.1

Sequence Viewer

Length: 1971 bp
ATGTCTGGAAATGAGCACTGTTTCGTAGAATGGAAAGAACACTTTGTTTCACAGGAGAGGGGCAACCGTGTGGTTCATTATTTCTTGAAGGATTCTGGTGGAGAATCCATACTTGCAGTTATAGGTACGGAGAGGAGTGTTAGGCACATGTTCTATGTTGTTGCAGAGGAGTTTTTGCAAGTGCACGGAAAGGAAAACTCGGCTAATTCTAACTACAAATGGAGGTCGAGAAGGGAGGTCGTGGATTGGCTTACATCTATGCTGTCCAAGCAGCATTTACATGGAGATATGCTTGAGTCACTTCAACATGATTCATCACGAGCTTTAGGTACTCCCGAATATCCAACTAATGCAATTAGTGGTCCCCAGATCCAAGTTTCCAAAGACTCGGGTCATCTTGCAAAGAACTTCAAGATGAACAGTCCAGACATTGTTTGGTCAGGTGTTTCATGGACATGTGGTAAACAGCTCAAGCATTTTCCTGCATTCTGTAGGAATGGGATTAAAATAGAGATTAAGTCCTTTGTATTCGTCATGGCAAAGGGAGAAAATCGGTATGTTGCTTATATGGAAGATATGTATGAAGACAAAAGGGGTCAAAAAAAGGTCAAAGTGAGGTGGTTTCACCGTAATCAGGAAGTTAAGGGGGTAATTCCTCTGCAAAATCCTCACCCAAAGGAAGTTTTCATCACGCCATATGTGCAGGTCATTAGTGCAGAGTGTGTTGATGGTCCTGCAACAGTTTTAACTCGTGAACATTATGAAAAGTGCGTACTTGTGTTTCCTCAGGCTTTATTGGCCAAAGTACATCTTTGCTACAGGCAGTTTAAAAGTAAAAGAGTGAAGCCATTTGATTTGAGTAAGATGCATGGCTATTTTGTTCAGCCGATTCTCTCTTATTTGAGTCCCAACTTTTTACCAAATTCAGAGTGTATAAGTGGTAGTCTGATTGGAAAAGAAGATAAGTTGGGCCCAAGTGACTATGTAAAGCTGGGAACTAAGAGGACTAGAAATGGAAGGCCATGCCAGAGGGTTCCAACTAATCAAAACTCAAACTTTGGTTTTCTGGACAGGAGGTTGCTTTCTTGGTATACCCCACTGTTTAAGGTTGATGAAAAGATAGAATTGCTATGCCAAGATAGTGGCATTCGGGGCTGCTGGTTTAGGTGTACAGTCTTGCAGACATCTCGAAAGCAGATTAGAGTCCAATACAATGATTTGCTAGATGAGGAAGGATGTGGCAATCTTGAGGAATGGATCCCTGCTTTTAGACTGGCTAAGCCTGATAAGATTGGCATGCGGCATCTAGGCCGTCCAATGATACGGCCAGCCCCTCCTGAGGTGCAAATGGACCTTCCTCTTGAGGTTGGAGCTGCAATTGATGCATGGTGGAGCGATGGCTGGTGGGAAGGGATTATAACTGGATTTGGCAGCTGTGATGATAATTTTCAAGTTTACTTTCCGGGGGAAAGCTTACTCTTGAACATGGACAAAAAGGATCTAAGAATATCTAGAGATTGGTTGGGGGACCAGTGGGTTGATATTGAGGCGAAGGCTGATGTCCTCTCAGCCATATCTTCAACAATTAGCTCTTGCCCTAGGCCCTTTGTGTCATCCAACATTGCCAAGGATGTTGAGGATGTTGATTGTGGTGGTAATACTTTATCATGTTCTGAACTTCCTTCTAGTTCTAGACATGAAAAAGATGAACTAGGCGCATCTCCCAGTTCTGATCATTTTCCTGAAAAAATGGACTTGGTCAATGATAAGAATTCACCATCAATAAAGGACATTGGTACTGAAGGTGTTGATGGCAATGACAGTTCTGGTGATATACATGTCCAAGGAAATGATGACGATGATGACAAAGATGACCACAATGGTGTTGTTGAGGGGCAAGAAGGCATGGAGGTGTTTGAAACTCCAGGGAAGAGTCCTAGAGCTGTAGAAATCATGGCGGTGACATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet BAH

Protein Analysis

656

Amino Acids

74.2

Weight (kDa)

5.9

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 170 - 258 8.4e-09 BAH domain
Agenet PF05641 372 - 446 4.2e-17 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1418
Acc36I ACCTGC 1 cut(s) 694
AccI GTMKAC 1 cut(s) 1091
AciI CCGC 2 cut(s) 1300, 1958
AclWI GGATC 4 cut(s) 364, 1252, 1265, 1506
AcoI YGGCCR 2 cut(s) 798, 1325
AcsI RAATTY 2 cut(s) 922, 1771
AcuI CTGAAG 1 cut(s) 1821
AfaI GTAC 6 cut(s) 127, 331, 774, 807, 1171, 1798
AfiI CCNNNNNNNGG 2 cut(s) 634, 1339
AflIII ACRYGT 3 cut(s) 147, 455, 1837
AgsI TTSAA 7 cut(s) 88, 305, 412, 1451, 1483, 1581, 1919
AjnI CCWGG 1 cut(s) 1924
AleI CACNNNNGTG 1 cut(s) 1881
AluBI AGCT 8 cut(s) 323, 469, 991, 1373, 1434, 1473, 1590, 1943
AluI AGCT 8 cut(s) 323, 469, 991, 1373, 1434, 1473, 1590, 1943
Alw21I GWGCWC 2 cut(s) 18, 186
Alw44I GTGCAC 1 cut(s) 182
AlwI GGATC 4 cut(s) 364, 1252, 1265, 1506
Ama87I CYCGRG 1 cut(s) 388
AoxI GGCC 6 cut(s) 798, 970, 1019, 1309, 1325, 1601
ApaI GGGCCC 1 cut(s) 974
ApaLI GTGCAC 1 cut(s) 182
ApeKI GCWGC 4 cut(s) 271, 1155, 1373, 1431
ApoI RAATTY 2 cut(s) 922, 1771
AspA2I CCTAGG 1 cut(s) 1598
AspLEI GCGC 1 cut(s) 1718
AspS9I GGNCC 7 cut(s) 362, 731, 970, 971, 1351, 1528, 1602
AsuC2I CCSGG 1 cut(s) 1464
AsuHPI GGTGA 4 cut(s) 617, 662, 1767, 1841
AvaI CYCGRG 1 cut(s) 388
AvaII GGWCC 4 cut(s) 362, 731, 1351, 1528
AvrII CCTAGG 1 cut(s) 1598
AxyI CCTNAGG 2 cut(s) 786, 1338
BaeGI GKGCMC 2 cut(s) 186, 974
BalI TGGCCA 1 cut(s) 800
BamHI GGATCC 1 cut(s) 1257
BanII GRGCYC 1 cut(s) 974
BauI CACGAG 2 cut(s) 318, 750
BbsI GAAGAC 1 cut(s) 591
Bbv12I GWGCWC 2 cut(s) 18, 186
BbvI GCAGC 4 cut(s) 283, 1142, 1360, 1443
BccI CCATC 4 cut(s) 722, 1391, 1786, 1805
BceAI ACGGC 2 cut(s) 1296, 1340
BcgI CGANNNNNNTGC 2 cut(s) 1169, 1203
BciT130I CCWGG 1 cut(s) 1926
BclI TGATCA 1 cut(s) 1732
BcnI CCSGG 1 cut(s) 1464
BfaI CTAG 9 cut(s) 1008, 1223, 1307, 1512, 1599, 1686, 1692, 1712, 1938
BfmI CTRYAG 3 cut(s) 490, 817, 1944
BfuAI ACCTGC 1 cut(s) 694
BisI GCNGC 5 cut(s) 272, 1156, 1301, 1374, 1432
BlnI CCTAGG 1 cut(s) 1598
BlpI GCTNAGC 1 cut(s) 1278
BlsI GCNGC 5 cut(s) 273, 1157, 1302, 1375, 1433
Bme1390I CCNGG 2 cut(s) 1464, 1926
Bme18I GGWCC 4 cut(s) 362, 731, 1351, 1528
BmeT110I CYCGRG 1 cut(s) 388
BmgT120I GGNCC 7 cut(s) 362, 731, 970, 971, 1351, 1528, 1602
BmiI GGNNCC 5 cut(s) 364, 972, 1035, 1259, 1529
BmrFI CCNGG 2 cut(s) 1464, 1926
BmrI ACTGGG 1 cut(s) 1719
BmsI GCATC 4 cut(s) 855, 1312, 1372, 1727
BmuI ACTGGG 1 cut(s) 1719
BoxI GACNNNNGTC 1 cut(s) 390
BpiI GAAGAC 1 cut(s) 591
BpmI CTGGAG 1 cut(s) 1908
Bpu1102I GCTNAGC 1 cut(s) 1278
BpuEI CTTGAG 4 cut(s) 314, 455, 1268, 1382
BpuMI CCSGG 1 cut(s) 1464
BsaJI CCNNGG 5 cut(s) 1463, 1598, 1626, 1843, 1925
Bsc4I CCNNNNNNNGG 2 cut(s) 634, 1339
Bse1I ACTGG 4 cut(s) 1278, 1426, 1531, 1725
Bse21I CCTNAGG 2 cut(s) 786, 1338
Bse3DI GCAATG 2 cut(s) 1620, 1822
BseBI CCWGG 1 cut(s) 1926
BseDI CCNNGG 5 cut(s) 1463, 1598, 1626, 1843, 1925
BseGI GGATG 4 cut(s) 1241, 1613, 1636, 1645
BseLI CCNNNNNNNGG 2 cut(s) 634, 1339
BseMI GCAATG 2 cut(s) 1620, 1822
BseMII CTCAG 3 cut(s) 800, 1329, 1581
BseNI ACTGG 4 cut(s) 1278, 1426, 1531, 1725
BseRI GAGGAG 2 cut(s) 148, 182
BseSI GKGCMC 2 cut(s) 186, 974
BseXI GCAGC 4 cut(s) 283, 1142, 1360, 1443
BseYI CCCAGC 1 cut(s) 991
BsgI GTGCAG 2 cut(s) 722, 735
BshFI GGCC 6 cut(s) 800, 972, 1021, 1311, 1327, 1603
BsiHKAI GWGCWC 2 cut(s) 18, 186
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 1 cut(s) 1463
BslFI GGGAC 3 cut(s) 348, 891, 1541
BslI CCNNNNNNNGG 2 cut(s) 634, 1339
BsmFI GGGAC 3 cut(s) 348, 891, 1541
BsmI GAATGC 2 cut(s) 485, 1146
BsnI GGCC 6 cut(s) 800, 972, 1021, 1311, 1327, 1603
BsoBI CYCGRG 1 cut(s) 388
Bsp120I GGGCCC 1 cut(s) 970
Bsp1286I GDGCHC 3 cut(s) 18, 186, 974
Bsp1407I TGTACA 1 cut(s) 1169
Bsp143I GATC 4 cut(s) 369, 1257, 1498, 1732
Bsp1720I GCTNAGC 1 cut(s) 1278
BspACI CCGC 2 cut(s) 1300, 1958
BspANI GGCC 6 cut(s) 800, 972, 1021, 1311, 1327, 1603
BspCNI CTCAG 3 cut(s) 799, 1330, 1580
BspLI GGNNCC 5 cut(s) 364, 972, 1035, 1259, 1529
BspMI ACCTGC 1 cut(s) 694
BspPI GGATC 4 cut(s) 364, 1252, 1265, 1506
BsrDI GCAATG 2 cut(s) 1620, 1822
BsrGI TGTACA 1 cut(s) 1169
BsrI ACTGG 4 cut(s) 1278, 1426, 1531, 1725
BssECI CCNNGG 5 cut(s) 1463, 1598, 1626, 1843, 1925
BssMI GATC 4 cut(s) 369, 1257, 1498, 1732
BssNAI GTATAC 1 cut(s) 1092
BssSI CACGAG 2 cut(s) 318, 750
BssT1I CCWWGG 3 cut(s) 1598, 1626, 1843
Bst1107I GTATAC 1 cut(s) 1092
Bst2BI CACGAG 2 cut(s) 318, 750
Bst2UI CCWGG 1 cut(s) 1926
Bst4CI ACNGT 8 cut(s) 20, 68, 422, 629, 742, 1101, 1174, 1823
Bst6I CTCTTC 1 cut(s) 1925
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstAUI TGTACA 1 cut(s) 1169
BstC8I GCNNGC 2 cut(s) 1298, 1329
BstDEI CTNAG 6 cut(s) 786, 999, 1278, 1338, 1502, 1567
BstF5I GGATG 4 cut(s) 1241, 1613, 1636, 1645
BstHHI GCGC 1 cut(s) 1718
BstKTI GATC 4 cut(s) 372, 1260, 1501, 1735
BstMBI GATC 4 cut(s) 369, 1257, 1498, 1732
BstMWI GCNNNNNNNGC 5 cut(s) 268, 700, 797, 1152, 1382
BstNI CCWGG 1 cut(s) 1926
BstNSI RCATGY 4 cut(s) 151, 459, 1300, 1841
BstPAI GACNNNNGTC 1 cut(s) 390
BstSCI CCNGG 2 cut(s) 1462, 1924
BstSFI CTRYAG 3 cut(s) 490, 817, 1944
BstSLI GKGCMC 2 cut(s) 186, 974
BstV1I GCAGC 4 cut(s) 283, 1142, 1360, 1443
BstV2I GAAGAC 1 cut(s) 591
BstX2I RGATCY 3 cut(s) 369, 1257, 1498
BstXI CCANNNNNNTGG 1 cut(s) 1142
BstYI RGATCY 3 cut(s) 369, 1257, 1498
BstZ17I GTATAC 1 cut(s) 1092
Bsu36I CCTNAGG 2 cut(s) 786, 1338
BsuRI GGCC 6 cut(s) 800, 972, 1021, 1311, 1327, 1603
BtgZI GCGATG 1 cut(s) 1410
BtsCI GGATG 4 cut(s) 1241, 1613, 1636, 1645
BtsIMutI CAGTG 3 cut(s) 16, 1097, 1538
BveI ACCTGC 1 cut(s) 694
Cac8I GCNNGC 2 cut(s) 1298, 1329
CfoI GCGC 1 cut(s) 1718
Cfr13I GGNCC 7 cut(s) 362, 731, 970, 971, 1351, 1528, 1602
Csp6I GTAC 6 cut(s) 126, 330, 773, 806, 1170, 1797
CviQI GTAC 6 cut(s) 126, 330, 773, 806, 1170, 1797
DdeI CTNAG 6 cut(s) 786, 999, 1278, 1338, 1502, 1567
DpnI GATC 4 cut(s) 371, 1259, 1500, 1734
DpnII GATC 4 cut(s) 369, 1257, 1498, 1732
DraI TTTAAA 1 cut(s) 829
EaeI YGGCCR 2 cut(s) 798, 1325
Eam1104I CTCTTC 1 cut(s) 1925
EarI CTCTTC 1 cut(s) 1925
Eco130I CCWWGG 3 cut(s) 1598, 1626, 1843
Eco24I GRGCYC 1 cut(s) 974
Eco47I GGWCC 4 cut(s) 362, 731, 1351, 1528
Eco57I CTGAAG 1 cut(s) 1821
Eco81I CCTNAGG 2 cut(s) 786, 1338
Eco88I CYCGRG 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 1602
EcoRI GAATTC 1 cut(s) 1771
EcoRII CCWGG 1 cut(s) 1924
EcoT14I CCWWGG 3 cut(s) 1598, 1626, 1843
EcoT22I ATGCAT 2 cut(s) 870, 1387
EcoT38I GRGCYC 1 cut(s) 974
ErhI CCWWGG 3 cut(s) 1598, 1626, 1843
FalI AAGNNNNNCTT 2 cut(s) 795, 827
FaqI GGGAC 3 cut(s) 348, 891, 1541
FauNDI CATATG 1 cut(s) 697
FbaI TGATCA 1 cut(s) 1732
FblI GTMKAC 1 cut(s) 1091
Fnu4HI GCNGC 5 cut(s) 272, 1156, 1301, 1374, 1432
FokI GGATG 4 cut(s) 1248, 1600, 1643, 1652
FriOI GRGCYC 1 cut(s) 974
Fsp4HI GCNGC 5 cut(s) 272, 1156, 1301, 1374, 1432
FspBI CTAG 9 cut(s) 1008, 1223, 1307, 1512, 1599, 1686, 1692, 1712, 1938
GlaI GCGC 1 cut(s) 1717
GluI GCNGC 5 cut(s) 272, 1156, 1301, 1374, 1432
GsaI CCCAGC 1 cut(s) 995
GsuI CTGGAG 1 cut(s) 1908
HaeIII GGCC 6 cut(s) 800, 972, 1021, 1311, 1327, 1603
HapII CCGG 1 cut(s) 1463
HhaI GCGC 1 cut(s) 1718
Hin6I GCGC 1 cut(s) 1716
HinP1I GCGC 1 cut(s) 1716
HindIII AAGCTT 1 cut(s) 1471
HinfI GANTC 9 cut(s) 92, 104, 296, 311, 386, 889, 904, 1203, 1933
HpaII CCGG 1 cut(s) 1463
HphI GGTGA 4 cut(s) 617, 662, 1767, 1841
Hpy166II GTNNAC 6 cut(s) 184, 464, 755, 1092, 1170, 1456
Hpy188I TCNGA 4 cut(s) 928, 948, 1675, 1732
Hpy8I GTNNAC 6 cut(s) 184, 464, 755, 1092, 1170, 1456
HpyCH4III ACNGT 8 cut(s) 20, 68, 422, 629, 742, 1101, 1174, 1823
HpyF10VI GCNNNNNNNGC 5 cut(s) 268, 700, 797, 1152, 1382
HpyF3I CTNAG 6 cut(s) 786, 999, 1278, 1338, 1502, 1567
HspAI GCGC 1 cut(s) 1716
Ksp22I TGATCA 1 cut(s) 1732
Kzo9I GATC 4 cut(s) 369, 1257, 1498, 1732
LmnI GCTCC 2 cut(s) 1370, 1392
Lsp1109I GCAGC 4 cut(s) 283, 1142, 1360, 1443
LweI GCATC 4 cut(s) 855, 1312, 1372, 1727
MaeI CTAG 9 cut(s) 1008, 1223, 1307, 1512, 1599, 1686, 1692, 1712, 1938
MaeIII GTNAC 3 cut(s) 297, 977, 1960
MalI GATC 4 cut(s) 371, 1259, 1500, 1734
MboI GATC 4 cut(s) 369, 1257, 1498, 1732
MboII GAAGA 5 cut(s) 584, 596, 971, 1569, 1942
MfeI CAATTG 1 cut(s) 1377
MflI RGATCY 3 cut(s) 369, 1257, 1498
MhlI GDGCHC 3 cut(s) 18, 186, 974
MlsI TGGCCA 1 cut(s) 800
MluCI AATT 9 cut(s) 205, 354, 651, 922, 1124, 1377, 1444, 1584, 1771
MluNI TGGCCA 1 cut(s) 800
MlyI GAGTC 5 cut(s) 305, 380, 913, 1212, 1942
MmeI TCCRAC 4 cut(s) 368, 1061, 1348, 1641
Mox20I TGGCCA 1 cut(s) 800
Mph1103I ATGCAT 2 cut(s) 870, 1387
MscI TGGCCA 1 cut(s) 800
MseI TTAA 6 cut(s) 504, 516, 642, 746, 828, 1104
MslI CAYNNNNRTG 5 cut(s) 279, 454, 1881, 1910, 1958
Msp20I TGGCCA 1 cut(s) 800
MspA1I CMGCKG 1 cut(s) 1434
MspI CCGG 1 cut(s) 1463
MspR9I CCNGG 2 cut(s) 1464, 1926
MunI CAATTG 1 cut(s) 1377
Mva1269I GAATGC 2 cut(s) 485, 1146
MvaI CCWGG 1 cut(s) 1926
MwoI GCNNNNNNNGC 5 cut(s) 268, 700, 797, 1152, 1382
NciI CCSGG 1 cut(s) 1464
NdeI CATATG 1 cut(s) 697
NdeII GATC 4 cut(s) 369, 1257, 1498, 1732
NlaIV GGNNCC 5 cut(s) 364, 972, 1035, 1259, 1529
NmeAIII GCCGAG 1 cut(s) 179
NmuCI GTSAC 3 cut(s) 297, 977, 1960
NsiI ATGCAT 2 cut(s) 870, 1387
NspI RCATGY 4 cut(s) 151, 459, 1300, 1841
OliI CACNNNNGTG 1 cut(s) 1881
PaeI GCATGC 1 cut(s) 1300
PciI ACATGT 3 cut(s) 147, 455, 1837
PctI GAATGC 2 cut(s) 485, 1146
PfeI GAWTC 4 cut(s) 92, 104, 311, 889
PflFI GACNNNGTC 1 cut(s) 1757
PkrI GCNGC 5 cut(s) 273, 1157, 1302, 1375, 1433
PleI GAGTC 5 cut(s) 304, 380, 912, 1211, 1941
PpsI GAGTC 5 cut(s) 304, 380, 912, 1211, 1941
PscI ACATGT 3 cut(s) 147, 455, 1837
PshAI GACNNNNGTC 1 cut(s) 390
PsiI TTATAA 1 cut(s) 1418
Psp6I CCWGG 1 cut(s) 1924
PspFI CCCAGC 1 cut(s) 991
PspGI CCWGG 1 cut(s) 1924
PspN4I GGNNCC 5 cut(s) 364, 972, 1035, 1259, 1529
PspOMI GGGCCC 1 cut(s) 970
PspPI GGNCC 7 cut(s) 362, 731, 970, 971, 1351, 1528, 1602
PsuI RGATCY 3 cut(s) 369, 1257, 1498
PsyI GACNNNGTC 1 cut(s) 1757
PvuII CAGCTG 1 cut(s) 1434
RsaI GTAC 6 cut(s) 127, 331, 774, 807, 1171, 1798
RsaNI GTAC 6 cut(s) 126, 330, 773, 806, 1170, 1797
RseI CAYNNNNRTG 5 cut(s) 279, 454, 1881, 1910, 1958
SaqAI TTAA 6 cut(s) 504, 516, 642, 746, 828, 1104
SatI GCNGC 5 cut(s) 272, 1156, 1301, 1374, 1432
Sau3AI GATC 4 cut(s) 369, 1257, 1498, 1732
Sau96I GGNCC 7 cut(s) 362, 731, 970, 971, 1351, 1528, 1602
SchI GAGTC 5 cut(s) 305, 380, 913, 1212, 1942
ScrFI CCNGG 2 cut(s) 1464, 1926
SduI GDGCHC 3 cut(s) 18, 186, 974
SfaNI GCATC 4 cut(s) 855, 1312, 1372, 1727
SfcI CTRYAG 3 cut(s) 490, 817, 1944
SinI GGWCC 4 cut(s) 362, 731, 1351, 1528
SmiMI CAYNNNNRTG 5 cut(s) 279, 454, 1881, 1910, 1958
SmlI CTYRAG 4 cut(s) 293, 470, 1247, 1361
SmoI CTYRAG 4 cut(s) 293, 470, 1247, 1361
SphI GCATGC 1 cut(s) 1300
Sse9I AATT 9 cut(s) 205, 354, 651, 922, 1124, 1377, 1444, 1584, 1771
SsiI CCGC 2 cut(s) 1300, 1958
SspMI CTAG 9 cut(s) 1008, 1223, 1307, 1512, 1599, 1686, 1692, 1712, 1938
StyD4I CCNGG 2 cut(s) 1462, 1924
StyI CCWWGG 3 cut(s) 1598, 1626, 1843
TaaI ACNGT 8 cut(s) 20, 68, 422, 629, 742, 1101, 1174, 1823
TaqI TCGA 2 cut(s) 227, 1189
TasI AATT 9 cut(s) 205, 354, 651, 922, 1124, 1377, 1444, 1584, 1771
TatI WGTACW 2 cut(s) 805, 1169
TauI GCSGC 1 cut(s) 1303
TfiI GAWTC 4 cut(s) 92, 104, 311, 889
Tru1I TTAA 6 cut(s) 504, 516, 642, 746, 828, 1104
Tru9I TTAA 6 cut(s) 504, 516, 642, 746, 828, 1104
TscAI CASTG 3 cut(s) 23, 1104, 1538
TseFI GTSAC 3 cut(s) 297, 977, 1960
TseI GCWGC 4 cut(s) 271, 1155, 1373, 1431
Tsp45I GTSAC 3 cut(s) 297, 977, 1960
TspGWI ACGGA 2 cut(s) 143, 201
TspRI CASTG 3 cut(s) 23, 1104, 1538
Tth111I GACNNNGTC 1 cut(s) 1757
VneI GTGCAC 1 cut(s) 182
VpaK11BI GGWCC 4 cut(s) 362, 731, 1351, 1528
XapI RAATTY 2 cut(s) 922, 1771
XbaI TCTAGA 2 cut(s) 1511, 1691
XceI RCATGY 4 cut(s) 151, 459, 1300, 1841
XcmI CCANNNNNNNNNTGG 1 cut(s) 432
XmaJI CCTAGG 1 cut(s) 1598
XmiI GTMKAC 1 cut(s) 1091
XspI CTAG 9 cut(s) 1008, 1223, 1307, 1512, 1599, 1686, 1692, 1712, 1938
Zsp2I ATGCAT 2 cut(s) 870, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.