Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001648

Physical Location & Seq

Genomic Coordinates Forward (+)

29215686 .. 29221289

Gene Structure 5604 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1201800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGCCTGGAAATGGTCACTTTTTCGTGGAGTGGAAAGAGCACTTTGTTTCGCAGGAGAAGGGCAACCGTGTGGTTCACTATTTCTTGAAGGATTCTTCTGGAGAATCCATTCTTGCAGTTGTGGGTACTGAGAGGAGTGTTAGGCACATGTTCTATGTTGTTTCCGAGGAGTTTTTGCAAGTGCACGGAATCGAGAGCTCCAATAGTGCCAACTTTAAATGGAGGTCAAGAAGGGAAGTTGTGGATTGGCTTACATCTATGCTGTCAAAGCAGCATATTCGTGGAGATCTGTCCGAATCACCCCAACATGATTCATCACAAGCTTCGGGGAGTCCCAAATATCCAATGAATGGAGTTAGTGGTCCCCAGGTGCAGGGCCGTCTTTCAAAGACCTTGAAGGGACGCAATCCGGACATTGTTTGGTCAGGTGTTGCATGTACATGTGGTAAACAGCTCAAGCATTTCCCTGCATTCTGTAGGGATGGAACTACAATAGCGATTAAGTCCTTTGTCTTTGTCATGGCAAAGGGAGAAAATCACTATGTTGCTTATGTGGAGGATATGTATGAAGACAAGAGGGGTCAAAAAAAGGTCAAAGTGAGGTGGTTTCACCGTAATCAGGAAGTCAAGGGGTTAACTCCTGTAAGAAATCCTCACCCAAAGGAAGTTTTCATCACTCCATATGTGCAGGTCATTAGTGCAGAATGTGTTGATGGTCCTGCAACAGTCTTAACTCGTGAACATTATGAAAAATGCTTAGCTGTGTTTCCTCAGGCTTTATTGGCCAGAGTTCATTTCTGCTGTAGACAGTTTAGAAGTAACAAGGTGAAGCCATTTGATTTGAGTAAAATGCATGGCTATTTTGATCAGCCAATTCTCTCTTGTTTGGGTCTTGAAGTTTCAGAAAAATCTGAGTTTATAACTGATAGCTTGATTGAGGAAGAAGATGAATTGGGTCCAAGTGACTATGTAAAGCGAGGGTCTAAGAGGACTAGAAGTGGAAGGCCATGTCAGAGGTTTGCAACTGGTCGTTCAAGAGCAAGAATTTCTAGTAGAGGTAACCAGATGATGACATATAGACCTCAGAACACAAACTGTGGTTTGCTCAGACGGTTGTTTTCCATGAAGCTTGTTGATTGTCAGCCTTGGTATGCCCCACTCTTTAAGGTTGATGAAAAGATAGAATTGCTTTGCCAAGATAGTGGCATTCGAGGCTGCTGGTTTAGGTGTACAGTGTTGCAGATAACACGAAAACAGATGAAAGTCCAATATGAGGATTTGCAAGACGAGGAAGCAAGTGGCAATCTTGAGGAATGGATCCCAGCTTTTAGATTGGCTATGCCTGATAAGCTTGGTATAAGGCATCTAGGCCGCCCAATGGTCCGGCCAACCCCTCCTAAGGAACAAATGGGCCTTGCCCTTGAGGTTGGGGTTGCAATTGATGCATGGTGGAGCGATGGCTGGTGGGAAGGGATTATAGCTGGAGTTGGCAGCTGTGCTGACACCTTTCAAGTTTTCATTCCTGGTGAAAGCTTACTCTTGAACATGCACAAAAATGATCTGAGAATATCCAAAGATTGGTTGGGAGACGAATGGGTTGATGTTGAGGTGAAGCCTGATGTACTTTCAGCTATATCTTCAACAATCATCTCATGCACTCGTCCCTTTACATCGTCTGCAGTTGTGAAAGGTGTCGACTCTGATGGGTTCGCTTTGTCGTATGTTGAAGTTCCTTCTAGTACTAAACATGTGGAAGAGGAAAAACAGAACTTAGCCGTATCTGCCAGTTTTGATGCTTCTGAAAATATGGACTTGGACAGTGATAGGAAGTCACCATCATTAAATGACATTGGTACTGAAGATGTTGATGTCGATGACTGTTGTGGTGATGTACAGGATTTCCAAGGTAATGATGTTGATGACAACAAAGATGACAAAATGGCCGAGGGTGACAAAGGTAACAACGGCGGGGGTGATGGCAAAAACAATGGTCATGATGAGGGCCAAGAAGGCATGGAGGTGTATGAAGTTGAAACTGCCGATACTGAACGTGTTGACGTGAGTGACAGTTGTGGTGATGTACAGGATATCCAGGTTAATGATGAAAAAGATGACAACAGTGTTGAGGATGACAAACGTGACAACGGTTTTGATTATGGAAAAAACAATGGTCATGATGAGGGCCAAGAAGGCATGGAGGTGTTTGAAACTGCTGGGGAGGGGAGCCCAAGAGCAGTAGAAATCATGGAAATGACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet BAH

Protein Analysis

754

Amino Acids

84.56

Weight (kDa)

5.1

Isoelectric Point (pI)

45.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	167 - 256	2e-10	BAH domain
Agenet	PF05641	392 - 466	6.4e-17	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55600 AT5G55600 AT5G55600
fragaria_vesca	FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g29480 FvH4_3g29480 FvH4_3g29480
malus_domestica	MD00G1057800.v1.1 MD03G1186700.v1.1 MD10G1336900.v1.1 MD11G1201800.v1.1
prunus_persica	Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G239800_v2.0.a1 Prupe.4G239800_v2.0.a1
pyrus_communis	pycom03g13890 pycom05g32630 pycom10g28640 pycom11g17430
rosa_chinensis	RchiOBHm_Chr5g0000741 RchiOBHm_Chr5g0054361
rosa_laevigata	RLG00000030891 RLG00000034926
rosa_multiflora	Rmu_co8288121.1_g000001 Rmu_co8324391.1_g000001 Rmu_co8332439.1_g000001 Rmu_co8394963.1_g000001 Rmu_sc0000255.1_g000004
rosa_roxburghii	Rroxscaffold_1G00026510 Rroxscaffold_1G00075490
rosa_rugosa	Rorug04G0386200 Rorug05G0285800
rosa_samantha	Rh5AG006100 Rh5AG356300 Rh5BG007900 Rh5BG367900 Rh5CG006600 Rh5CG391200 Rh5DG006600 Rh5DG382100
rosa_wichuraiana	Rw5G000620 Rw5G033470 Rw5G033640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	920
Acc36I	ACCTGC	1 cut(s)	679
AccB7I	CCANNNNNTGG	2 cut(s)	350, 1578
AccI	GTMKAC	2 cut(s)	805, 1695
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	2 cut(s)	1372, 1968
AclWI	GGATC	2 cut(s)	1312, 1325
AcoI	YGGCCR	3 cut(s)	783, 1385, 1941
AcsI	RAATTY	1 cut(s)	1044
AcuI	CTGAAG	1 cut(s)	1878
AfaI	GTAC	8 cut(s)	127, 439, 1231, 1623, 1741, 1855, 1893, 2082
AfiI	CCNNNNNNNGG	8 cut(s)	11, 350, 373, 619, 1273, 1378, 1399, 1578
AflIII	ACRYGT	4 cut(s)	147, 440, 1747, 2050
AjiI	CACGTC	1 cut(s)	2059
AjnI	CCWGG	4 cut(s)	4, 366, 1522, 2091
Alw21I	GWGCWC	3 cut(s)	42, 186, 200
Alw26I	GTCTC	1 cut(s)	1581
Alw44I	GTGCAC	1 cut(s)	182
AlwI	GGATC	2 cut(s)	1312, 1325
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	9 cut(s)	376, 783, 1004, 1369, 1385, 1411, 1941, 2002, 2182
ApaLI	GTGCAC	1 cut(s)	182
ApeKI	GCWGC	3 cut(s)	271, 1215, 1491
ApoI	RAATTY	1 cut(s)	1044
ArsI	GACNNNNNNTTYG	2 cut(s)	2132, 2164
Asp700I	GAANNNNTTC	1 cut(s)	108
AspS9I	GGNCC	8 cut(s)	362, 376, 716, 956, 1381, 1411, 2002, 2182
AvaII	GGWCC	4 cut(s)	362, 716, 956, 1381
AxyI	CCTNAGG	2 cut(s)	771, 1398
BaeGI	GKGCMC	1 cut(s)	186
BalI	TGGCCA	1 cut(s)	785
BamHI	GGATCC	1 cut(s)	1317
BanII	GRGCYC	2 cut(s)	200, 2228
BauI	CACGAG	1 cut(s)	735
BbsI	GAAGAC	1 cut(s)	576
Bbv12I	GWGCWC	3 cut(s)	42, 186, 200
BbvI	GCAGC	3 cut(s)	283, 1202, 1503
BccI	CCATC	6 cut(s)	476, 707, 1451, 1697, 1843, 1970
BceAI	ACGGC	3 cut(s)	363, 1760, 1981
BcgI	CGANNNNNNTGC	2 cut(s)	260, 294
BciT130I	CCWGG	4 cut(s)	6, 368, 1524, 2093
BclI	TGATCA	1 cut(s)	865
BcoDI	GTCTC	1 cut(s)	1581
BfaI	CTAG	4 cut(s)	993, 1050, 1367, 1737
BfmI	CTRYAG	3 cut(s)	475, 802, 1677
BfuAI	ACCTGC	1 cut(s)	679
BglI	GCCNNNNNGGC	2 cut(s)	2010, 2190
BglII	AGATCT	1 cut(s)	286
BisI	GCNGC	4 cut(s)	272, 1216, 1372, 1492
BlpI	GCTNAGC	1 cut(s)	757
BlsI	GCNGC	4 cut(s)	273, 1217, 1373, 1493
BmcAI	AGTACT	1 cut(s)	1741
Bme1390I	CCNGG	4 cut(s)	6, 368, 1524, 2093
Bme18I	GGWCC	4 cut(s)	362, 716, 956, 1381
BmgBI	CACGTC	1 cut(s)	2059
BmgT120I	GGNCC	8 cut(s)	362, 376, 716, 956, 1381, 1411, 2002, 2182
BmiI	GGNNCC	4 cut(s)	364, 957, 1319, 2225
BmrFI	CCNGG	4 cut(s)	6, 368, 1524, 2093
BmsI	GCATC	3 cut(s)	1372, 1432, 1783
BpiI	GAAGAC	1 cut(s)	576
BpmI	CTGGAG	2 cut(s)	120, 1503
Bpu1102I	GCTNAGC	1 cut(s)	757
BpuEI	CTTGAG	3 cut(s)	440, 1328, 1442
BsaJI	CCNNGG	5 cut(s)	165, 366, 1145, 1903, 1944
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	2 cut(s)	548, 578
Bsc4I	CCNNNNNNNGG	8 cut(s)	11, 350, 373, 619, 1273, 1378, 1399, 1578
Bse1I	ACTGG	2 cut(s)	1030, 1785
Bse21I	CCTNAGG	2 cut(s)	771, 1398
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	4 cut(s)	6, 368, 1524, 2093
BseDI	CCNNGG	5 cut(s)	165, 366, 1145, 1903, 1944
BseGI	GGATG	2 cut(s)	487, 2134
BseLI	CCNNNNNNNGG	8 cut(s)	11, 350, 373, 619, 1273, 1378, 1399, 1578
BseMII	CTCAG	6 cut(s)	120, 785, 903, 1097, 1120, 1553
BseNI	ACTGG	2 cut(s)	1030, 1785
BseRI	GAGGAG	2 cut(s)	148, 182
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	3 cut(s)	283, 1202, 1503
BseYI	CCCAGC	2 cut(s)	1321, 2213
BsgI	GTGCAG	3 cut(s)	392, 707, 720
BshFI	GGCC	9 cut(s)	378, 785, 1006, 1371, 1387, 1413, 1943, 2004, 2184
BsiHKAI	GWGCWC	3 cut(s)	42, 186, 200
BsiSI	CCGG	2 cut(s)	410, 1384
BslFI	GGGAC	4 cut(s)	318, 348, 414, 1647
BslI	CCNNNNNNNGG	8 cut(s)	11, 350, 373, 619, 1273, 1378, 1399, 1578
BsmAI	GTCTC	1 cut(s)	1581
BsmBI	CGTCTC	1 cut(s)	1581
BsmFI	GGGAC	4 cut(s)	318, 348, 414, 1647
BsmI	GAATGC	2 cut(s)	470, 1206
BsnI	GGCC	9 cut(s)	378, 785, 1006, 1371, 1387, 1413, 1943, 2004, 2184
Bsp1286I	GDGCHC	4 cut(s)	42, 186, 200, 2228
Bsp13I	TCCGGA	1 cut(s)	409
Bsp1407I	TGTACA	4 cut(s)	437, 1229, 1891, 2080
Bsp143I	GATC	4 cut(s)	286, 865, 1317, 1558
Bsp1720I	GCTNAGC	1 cut(s)	757
BspACI	CCGC	2 cut(s)	1372, 1968
BspANI	GGCC	9 cut(s)	378, 785, 1006, 1371, 1387, 1413, 1943, 2004, 2184
BspCNI	CTCAG	6 cut(s)	121, 784, 904, 1096, 1119, 1554
BspEI	TCCGGA	1 cut(s)	409
BspHI	TCATGA	2 cut(s)	1993, 2173
BspLI	GGNNCC	4 cut(s)	364, 957, 1319, 2225
BspMAI	CTGCAG	1 cut(s)	1681
BspMI	ACCTGC	1 cut(s)	679
BspPI	GGATC	2 cut(s)	1312, 1325
BsrGI	TGTACA	4 cut(s)	437, 1229, 1891, 2080
BsrI	ACTGG	2 cut(s)	1030, 1785
BssECI	CCNNGG	5 cut(s)	165, 366, 1145, 1903, 1944
BssMI	GATC	4 cut(s)	286, 865, 1317, 1558
BssSI	CACGAG	1 cut(s)	735
BssT1I	CCWWGG	2 cut(s)	1145, 1903
Bst2BI	CACGAG	1 cut(s)	735
Bst2UI	CCWGG	4 cut(s)	6, 368, 1524, 2093
Bst6I	CTCTTC	1 cut(s)	1749
BstAPI	GCANNNNNTGC	1 cut(s)	1442
BstAUI	TGTACA	4 cut(s)	437, 1229, 1891, 2080
BstEII	GGTNACC	1 cut(s)	1058
BstF5I	GGATG	2 cut(s)	487, 2134
BstKTI	GATC	4 cut(s)	289, 868, 1320, 1561
BstMAI	GTCTC	1 cut(s)	1581
BstMBI	GATC	4 cut(s)	286, 865, 1317, 1558
BstMWI	GCNNNNNNNGC	8 cut(s)	268, 782, 1212, 1348, 1442, 1781, 2010, 2190
BstNI	CCWGG	4 cut(s)	6, 368, 1524, 2093
BstNSI	RCATGY	5 cut(s)	151, 438, 444, 1549, 1751
BstPI	GGTNACC	1 cut(s)	1058
BstSCI	CCNGG	4 cut(s)	4, 366, 1522, 2091
BstSFI	CTRYAG	3 cut(s)	475, 802, 1677
BstSLI	GKGCMC	1 cut(s)	186
BstV1I	GCAGC	3 cut(s)	283, 1202, 1503
BstV2I	GAAGAC	1 cut(s)	576
BstX2I	RGATCY	2 cut(s)	286, 1317
BstXI	CCANNNNNNTGG	1 cut(s)	1202
BstYI	RGATCY	2 cut(s)	286, 1317
Bsu36I	CCTNAGG	2 cut(s)	771, 1398
BsuRI	GGCC	9 cut(s)	378, 785, 1006, 1371, 1387, 1413, 1943, 2004, 2184
BtgZI	GCGATG	1 cut(s)	1470
BtrI	CACGTC	1 cut(s)	2059
BtsCI	GGATG	2 cut(s)	487, 2134
BtsIMutI	CAGTG	3 cut(s)	1239, 1825, 2125
BveI	ACCTGC	1 cut(s)	679
CciI	TCATGA	2 cut(s)	1993, 2173
Cfr13I	GGNCC	8 cut(s)	362, 376, 716, 956, 1381, 1411, 2002, 2182
CseI	GACGC	1 cut(s)	411
Csp6I	GTAC	8 cut(s)	126, 438, 1230, 1622, 1740, 1854, 1892, 2081
CviQI	GTAC	8 cut(s)	126, 438, 1230, 1622, 1740, 1854, 1892, 2081
DpnI	GATC	4 cut(s)	288, 867, 1319, 1560
DpnII	GATC	4 cut(s)	286, 865, 1317, 1558
DraI	TTTAAA	1 cut(s)	217
EaeI	YGGCCR	3 cut(s)	783, 1385, 1941
Eam1104I	CTCTTC	1 cut(s)	1749
EarI	CTCTTC	1 cut(s)	1749
Ecl136II	GAGCTC	1 cut(s)	198
Eco130I	CCWWGG	2 cut(s)	1145, 1903
Eco24I	GRGCYC	2 cut(s)	200, 2228
Eco32I	GATATC	1 cut(s)	2089
Eco47I	GGWCC	4 cut(s)	362, 716, 956, 1381
Eco53kI	GAGCTC	1 cut(s)	198
Eco57I	CTGAAG	1 cut(s)	1878
Eco81I	CCTNAGG	2 cut(s)	771, 1398
Eco91I	GGTNACC	1 cut(s)	1058
EcoICRI	GAGCTC	1 cut(s)	198
EcoO65I	GGTNACC	1 cut(s)	1058
EcoRII	CCWGG	4 cut(s)	4, 366, 1522, 2091
EcoRV	GATATC	1 cut(s)	2089
EcoT14I	CCWWGG	2 cut(s)	1145, 1903
EcoT22I	ATGCAT	2 cut(s)	855, 1447
EcoT38I	GRGCYC	2 cut(s)	200, 2228
ErhI	CCWWGG	2 cut(s)	1145, 1903
Esp3I	CGTCTC	1 cut(s)	1581
FaqI	GGGAC	4 cut(s)	318, 348, 414, 1647
FauI	CCCGC	1 cut(s)	1961
FauNDI	CATATG	1 cut(s)	682
FbaI	TGATCA	1 cut(s)	865
FblI	GTMKAC	2 cut(s)	805, 1695
Fnu4HI	GCNGC	4 cut(s)	272, 1216, 1372, 1492
FokI	GGATG	2 cut(s)	494, 2141
FriOI	GRGCYC	2 cut(s)	200, 2228
Fsp4HI	GCNGC	4 cut(s)	272, 1216, 1372, 1492
FspBI	CTAG	4 cut(s)	993, 1050, 1367, 1737
GluI	GCNGC	4 cut(s)	272, 1216, 1372, 1492
GsaI	CCCAGC	2 cut(s)	1325, 2217
GsuI	CTGGAG	2 cut(s)	120, 1503
HaeIII	GGCC	9 cut(s)	378, 785, 1006, 1371, 1387, 1413, 1943, 2004, 2184
HapII	CCGG	2 cut(s)	410, 1384
HgaI	GACGC	1 cut(s)	411
HincII	GTYRAC	3 cut(s)	636, 1696, 2056
HindII	GTYRAC	3 cut(s)	636, 1696, 2056
HindIII	AAGCTT	4 cut(s)	321, 1127, 1349, 1531
HinfI	GANTC	7 cut(s)	92, 104, 189, 296, 311, 331, 1697
HpaI	GTTAAC	1 cut(s)	636
HpaII	CCGG	2 cut(s)	410, 1384
Hpy166II	GTNNAC	9 cut(s)	76, 184, 449, 636, 740, 806, 1230, 1696, 2056
Hpy8I	GTNNAC	9 cut(s)	76, 184, 449, 636, 740, 806, 1230, 1696, 2056
HpyAV	CCTTC	9 cut(s)	52, 82, 225, 391, 996, 1463, 1743, 2003, 2183
HpyCH4IV	ACGT	3 cut(s)	2050, 2058, 2137
HpyF10VI	GCNNNNNNNGC	8 cut(s)	268, 782, 1212, 1348, 1442, 1781, 2010, 2190
HpySE526I	ACGT	3 cut(s)	2050, 2058, 2137
Kpn2I	TCCGGA	1 cut(s)	409
Ksp22I	TGATCA	1 cut(s)	865
KspAI	GTTAAC	1 cut(s)	636
Kzo9I	GATC	4 cut(s)	286, 865, 1317, 1558
LmnI	GCTCC	3 cut(s)	203, 1452, 2223
Lsp1109I	GCAGC	3 cut(s)	283, 1202, 1503
LweI	GCATC	3 cut(s)	1372, 1432, 1783
MaeI	CTAG	4 cut(s)	993, 1050, 1367, 1737
MaeII	ACGT	3 cut(s)	2050, 2058, 2137
MaeIII	GTNAC	9 cut(s)	14, 818, 962, 1058, 1830, 1949, 1958, 2063, 2138
MalI	GATC	4 cut(s)	288, 867, 1319, 1560
MboI	GATC	4 cut(s)	286, 865, 1317, 1558
MboII	GAAGA	7 cut(s)	87, 581, 953, 956, 1629, 1766, 1871
MfeI	CAATTG	1 cut(s)	1437
MflI	RGATCY	2 cut(s)	286, 1317
MhlI	GDGCHC	4 cut(s)	42, 186, 200, 2228
MlsI	TGGCCA	1 cut(s)	785
MluCI	AATT	5 cut(s)	873, 950, 1044, 1184, 1437
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	2 cut(s)	340, 1691
Mox20I	TGGCCA	1 cut(s)	785
Mph1103I	ATGCAT	2 cut(s)	855, 1447
MroI	TCCGGA	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	108
MscI	TGGCCA	1 cut(s)	785
MseI	TTAA	7 cut(s)	216, 501, 635, 731, 1164, 1841, 2097
MslI	CAYNNNNRTG	6 cut(s)	279, 439, 1554, 2018, 2198, 2249
Msp20I	TGGCCA	1 cut(s)	785
MspA1I	CMGCKG	1 cut(s)	1494
MspI	CCGG	2 cut(s)	410, 1384
MspR9I	CCNGG	4 cut(s)	6, 368, 1524, 2093
MunI	CAATTG	1 cut(s)	1437
Mva1269I	GAATGC	2 cut(s)	470, 1206
MvaI	CCWGG	4 cut(s)	6, 368, 1524, 2093
MwoI	GCNNNNNNNGC	8 cut(s)	268, 782, 1212, 1348, 1442, 1781, 2010, 2190
NdeI	CATATG	1 cut(s)	682
NdeII	GATC	4 cut(s)	286, 865, 1317, 1558
NlaIV	GGNNCC	4 cut(s)	364, 957, 1319, 2225
NmeAIII	GCCGAG	1 cut(s)	1969
NmuCI	GTSAC	6 cut(s)	14, 962, 1830, 1949, 2063, 2138
NsiI	ATGCAT	2 cut(s)	855, 1447
NspI	RCATGY	5 cut(s)	151, 438, 444, 1549, 1751
PagI	TCATGA	2 cut(s)	1993, 2173
PciI	ACATGT	3 cut(s)	147, 440, 1747
PctI	GAATGC	2 cut(s)	470, 1206
PdmI	GAANNNNTTC	1 cut(s)	108
PfeI	GAWTC	5 cut(s)	92, 104, 189, 296, 311
PflMI	CCANNNNNTGG	2 cut(s)	350, 1578
PkrI	GCNGC	4 cut(s)	273, 1217, 1373, 1493
PleI	GAGTC	2 cut(s)	339, 1691
PpsI	GAGTC	2 cut(s)	339, 1691
PscI	ACATGT	3 cut(s)	147, 440, 1747
PsiI	TTATAA	1 cut(s)	920
Psp124BI	GAGCTC	1 cut(s)	200
Psp6I	CCWGG	4 cut(s)	4, 366, 1522, 2091
PspEI	GGTNACC	1 cut(s)	1058
PspFI	CCCAGC	2 cut(s)	1321, 2213
PspGI	CCWGG	4 cut(s)	4, 366, 1522, 2091
PspN4I	GGNNCC	4 cut(s)	364, 957, 1319, 2225
PspPI	GGNCC	8 cut(s)	362, 376, 716, 956, 1381, 1411, 2002, 2182
PstI	CTGCAG	1 cut(s)	1681
PsuI	RGATCY	2 cut(s)	286, 1317
PvuII	CAGCTG	1 cut(s)	1494
RsaI	GTAC	8 cut(s)	127, 439, 1231, 1623, 1741, 1855, 1893, 2082
RsaNI	GTAC	8 cut(s)	126, 438, 1230, 1622, 1740, 1854, 1892, 2081
RseI	CAYNNNNRTG	6 cut(s)	279, 439, 1554, 2018, 2198, 2249
SacI	GAGCTC	1 cut(s)	200
SalI	GTCGAC	1 cut(s)	1694
SaqAI	TTAA	7 cut(s)	216, 501, 635, 731, 1164, 1841, 2097
SatI	GCNGC	4 cut(s)	272, 1216, 1372, 1492
Sau3AI	GATC	4 cut(s)	286, 865, 1317, 1558
Sau96I	GGNCC	8 cut(s)	362, 376, 716, 956, 1381, 1411, 2002, 2182
ScaI	AGTACT	1 cut(s)	1741
SchI	GAGTC	2 cut(s)	340, 1691
ScrFI	CCNGG	4 cut(s)	6, 368, 1524, 2093
SduI	GDGCHC	4 cut(s)	42, 186, 200, 2228
SfaNI	GCATC	3 cut(s)	1372, 1432, 1783
SfcI	CTRYAG	3 cut(s)	475, 802, 1677
SinI	GGWCC	4 cut(s)	362, 716, 956, 1381
SmiMI	CAYNNNNRTG	6 cut(s)	279, 439, 1554, 2018, 2198, 2249
SmlI	CTYRAG	3 cut(s)	455, 1307, 1421
SmoI	CTYRAG	3 cut(s)	455, 1307, 1421
Sse9I	AATT	5 cut(s)	873, 950, 1044, 1184, 1437
SsiI	CCGC	2 cut(s)	1372, 1968
SspMI	CTAG	4 cut(s)	993, 1050, 1367, 1737
SstI	GAGCTC	1 cut(s)	200
StyD4I	CCNGG	4 cut(s)	4, 366, 1522, 2091
StyI	CCWWGG	2 cut(s)	1145, 1903
TaiI	ACGT	3 cut(s)	2053, 2061, 2140
TaqI	TCGA	4 cut(s)	192, 1210, 1695, 1872
TasI	AATT	5 cut(s)	873, 950, 1044, 1184, 1437
TatI	WGTACW	6 cut(s)	437, 1229, 1621, 1739, 1891, 2080
TauI	GCSGC	1 cut(s)	1374
TfiI	GAWTC	5 cut(s)	92, 104, 189, 296, 311
Tru1I	TTAA	7 cut(s)	216, 501, 635, 731, 1164, 1841, 2097
Tru9I	TTAA	7 cut(s)	216, 501, 635, 731, 1164, 1841, 2097
TscAI	CASTG	3 cut(s)	1239, 1825, 2125
TseFI	GTSAC	6 cut(s)	14, 962, 1830, 1949, 2063, 2138
TseI	GCWGC	3 cut(s)	271, 1215, 1491
Tsp45I	GTSAC	6 cut(s)	14, 962, 1830, 1949, 2063, 2138
TspGWI	ACGGA	1 cut(s)	201
TspRI	CASTG	3 cut(s)	1239, 1825, 2125
Van91I	CCANNNNNTGG	2 cut(s)	350, 1578
VneI	GTGCAC	1 cut(s)	182
VpaK11BI	GGWCC	4 cut(s)	362, 716, 956, 1381
XapI	RAATTY	1 cut(s)	1044
XceI	RCATGY	5 cut(s)	151, 438, 444, 1549, 1751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1579
XmiI	GTMKAC	2 cut(s)	805, 1695
XmnI	GAANNNNTTC	1 cut(s)	108
XspI	CTAG	4 cut(s)	993, 1050, 1367, 1737
ZrmI	AGTACT	1 cut(s)	1741
Zsp2I	ATGCAT	2 cut(s)	855, 1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.