Agenet domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 914 |
| Acc36I | ACCTGC | 1 cut(s) | 673 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1575 |
| AccI | GTMKAC | 3 cut(s) | 799, 1148, 1692 |
| AccIII | TCCGGA | 1 cut(s) | 403 |
| AciI | CCGC | 4 cut(s) | 932, 1108, 1369, 1965 |
| AclWI | GGATC | 2 cut(s) | 1309, 1322 |
| AcoI | YGGCCR | 4 cut(s) | 777, 1021, 1382, 1938 |
| AcuI | CTGAAG | 1 cut(s) | 1875 |
| AfaI | GTAC | 8 cut(s) | 127, 786, 1228, 1620, 1738, 1852, 1890, 2079 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 11, 350, 613, 1270, 1375, 1396, 1575 |
| AflIII | ACRYGT | 3 cut(s) | 147, 1744, 2047 |
| AjnI | CCWGG | 4 cut(s) | 4, 366, 1519, 2088 |
| Alw21I | GWGCWC | 2 cut(s) | 42, 200 |
| Alw26I | GTCTC | 2 cut(s) | 890, 1578 |
| AlwI | GGATC | 2 cut(s) | 1309, 1322 |
| Aor13HI | TCCGGA | 1 cut(s) | 403 |
| ApeKI | GCWGC | 4 cut(s) | 271, 792, 1212, 1488 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 8 cut(s) | 362, 370, 710, 950, 1378, 1408, 1999, 2188 |
| AvaII | GGWCC | 4 cut(s) | 362, 710, 950, 1378 |
| AxyI | CCTNAGG | 2 cut(s) | 765, 1395 |
| BalI | TGGCCA | 1 cut(s) | 779 |
| BamHI | GGATCC | 1 cut(s) | 1314 |
| BanII | GRGCYC | 2 cut(s) | 200, 2234 |
| BauI | CACGAG | 1 cut(s) | 729 |
| BbsI | GAAGAC | 1 cut(s) | 570 |
| Bbv12I | GWGCWC | 2 cut(s) | 42, 200 |
| BbvI | GCAGC | 4 cut(s) | 283, 779, 1199, 1500 |
| BccI | CCATC | 7 cut(s) | 470, 701, 1448, 1652, 1694, 1967, 2156 |
| BceAI | ACGGC | 3 cut(s) | 357, 1008, 1757 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 260, 294 |
| BciT130I | CCWGG | 4 cut(s) | 6, 368, 1521, 2090 |
| BcoDI | GTCTC | 2 cut(s) | 890, 1578 |
| BfaI | CTAG | 6 cut(s) | 987, 1044, 1100, 1364, 1734, 1782 |
| BfmI | CTRYAG | 3 cut(s) | 469, 796, 1674 |
| BfuAI | ACCTGC | 1 cut(s) | 673 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2007, 2196 |
| BglII | AGATCT | 1 cut(s) | 286 |
| BisI | GCNGC | 5 cut(s) | 272, 793, 1213, 1369, 1489 |
| BlpI | GCTNAGC | 1 cut(s) | 751 |
| BlsI | GCNGC | 5 cut(s) | 273, 794, 1214, 1370, 1490 |
| BmcAI | AGTACT | 1 cut(s) | 1738 |
| Bme1390I | CCNGG | 4 cut(s) | 6, 368, 1521, 2090 |
| Bme18I | GGWCC | 4 cut(s) | 362, 710, 950, 1378 |
| BmgT120I | GGNCC | 8 cut(s) | 362, 370, 710, 950, 1378, 1408, 1999, 2188 |
| BmiI | GGNNCC | 4 cut(s) | 364, 951, 1316, 2231 |
| BmrFI | CCNGG | 4 cut(s) | 6, 368, 1521, 2090 |
| BmsI | GCATC | 2 cut(s) | 1429, 1780 |
| BpiI | GAAGAC | 1 cut(s) | 570 |
| BpmI | CTGGAG | 2 cut(s) | 120, 1500 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 751 |
| BpuEI | CTTGAG | 3 cut(s) | 434, 1325, 1439 |
| BsaI | GGTCTC | 1 cut(s) | 890 |
| BsaJI | CCNNGG | 5 cut(s) | 366, 367, 1142, 1900, 1941 |
| BsaWI | WCCGGW | 1 cut(s) | 403 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 542, 572 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 11, 350, 613, 1270, 1375, 1396, 1575 |
| Bse1I | ACTGG | 1 cut(s) | 1024 |
| Bse21I | CCTNAGG | 2 cut(s) | 765, 1395 |
| Bse3DI | GCAATG | 1 cut(s) | 787 |
| BseAI | TCCGGA | 1 cut(s) | 403 |
| BseBI | CCWGG | 4 cut(s) | 6, 368, 1521, 2090 |
| BseDI | CCNNGG | 5 cut(s) | 366, 367, 1142, 1900, 1941 |
| BseGI | GGATG | 3 cut(s) | 481, 2089, 2140 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 11, 350, 613, 1270, 1375, 1396, 1575 |
| BseMI | GCAATG | 1 cut(s) | 787 |
| BseMII | CTCAG | 6 cut(s) | 120, 156, 779, 897, 1091, 1550 |
| BseNI | ACTGG | 1 cut(s) | 1024 |
| BseRI | GAGGAG | 2 cut(s) | 148, 182 |
| BseXI | GCAGC | 4 cut(s) | 283, 779, 1199, 1500 |
| BseYI | CCCAGC | 1 cut(s) | 1318 |
| BsgI | GTGCAG | 2 cut(s) | 701, 714 |
| BsiHKAI | GWGCWC | 2 cut(s) | 42, 200 |
| BsiSI | CCGG | 2 cut(s) | 404, 1381 |
| BslFI | GGGAC | 4 cut(s) | 318, 348, 408, 1644 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 11, 350, 613, 1270, 1375, 1396, 1575 |
| BsmAI | GTCTC | 2 cut(s) | 890, 1578 |
| BsmBI | CGTCTC | 1 cut(s) | 1578 |
| BsmFI | GGGAC | 4 cut(s) | 318, 348, 408, 1644 |
| BsmI | GAATGC | 2 cut(s) | 464, 1203 |
| Bso31I | GGTCTC | 1 cut(s) | 890 |
| Bsp1286I | GDGCHC | 3 cut(s) | 42, 200, 2234 |
| Bsp13I | TCCGGA | 1 cut(s) | 403 |
| Bsp1407I | TGTACA | 3 cut(s) | 1226, 1888, 2077 |
| Bsp143I | GATC | 3 cut(s) | 286, 1314, 1555 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 751 |
| BspACI | CCGC | 4 cut(s) | 932, 1108, 1369, 1965 |
| BspCNI | CTCAG | 6 cut(s) | 121, 157, 778, 898, 1090, 1551 |
| BspEI | TCCGGA | 1 cut(s) | 403 |
| BspHI | TCATGA | 2 cut(s) | 1990, 2179 |
| BspLI | GGNNCC | 4 cut(s) | 364, 951, 1316, 2231 |
| BspMAI | CTGCAG | 1 cut(s) | 1678 |
| BspMI | ACCTGC | 1 cut(s) | 673 |
| BspPI | GGATC | 2 cut(s) | 1309, 1322 |
| BspTNI | GGTCTC | 1 cut(s) | 890 |
| BsrDI | GCAATG | 1 cut(s) | 787 |
| BsrGI | TGTACA | 3 cut(s) | 1226, 1888, 2077 |
| BsrI | ACTGG | 1 cut(s) | 1024 |
| BssECI | CCNNGG | 5 cut(s) | 366, 367, 1142, 1900, 1941 |
| BssMI | GATC | 3 cut(s) | 286, 1314, 1555 |
| BssNAI | GTATAC | 1 cut(s) | 1149 |
| BssSI | CACGAG | 1 cut(s) | 729 |
| BssT1I | CCWWGG | 2 cut(s) | 1142, 1900 |
| Bst1107I | GTATAC | 1 cut(s) | 1149 |
| Bst2BI | CACGAG | 1 cut(s) | 729 |
| Bst2UI | CCWGG | 4 cut(s) | 6, 368, 1521, 2090 |
| Bst6I | CTCTTC | 1 cut(s) | 1746 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1439 |
| BstAUI | TGTACA | 3 cut(s) | 1226, 1888, 2077 |
| BstEII | GGTNACC | 2 cut(s) | 1052, 1827 |
| BstF5I | GGATG | 3 cut(s) | 481, 2089, 2140 |
| BstKTI | GATC | 3 cut(s) | 289, 1317, 1558 |
| BstMAI | GTCTC | 2 cut(s) | 890, 1578 |
| BstMBI | GATC | 3 cut(s) | 286, 1314, 1555 |
| BstNI | CCWGG | 4 cut(s) | 6, 368, 1521, 2090 |
| BstNSI | RCATGY | 5 cut(s) | 151, 432, 438, 1546, 1748 |
| BstPI | GGTNACC | 2 cut(s) | 1052, 1827 |
| BstSCI | CCNGG | 4 cut(s) | 4, 366, 1519, 2088 |
| BstSFI | CTRYAG | 3 cut(s) | 469, 796, 1674 |
| BstV1I | GCAGC | 4 cut(s) | 283, 779, 1199, 1500 |
| BstV2I | GAAGAC | 1 cut(s) | 570 |
| BstX2I | RGATCY | 2 cut(s) | 286, 1314 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1008, 1199 |
| BstYI | RGATCY | 2 cut(s) | 286, 1314 |
| BstZ17I | GTATAC | 1 cut(s) | 1149 |
| Bsu36I | CCTNAGG | 2 cut(s) | 765, 1395 |
| BtgZI | GCGATG | 1 cut(s) | 1467 |
| BtsCI | GGATG | 3 cut(s) | 481, 2089, 2140 |
| BtsIMutI | CAGTG | 4 cut(s) | 1013, 1236, 1822, 2131 |
| BveI | ACCTGC | 1 cut(s) | 673 |
| CciI | TCATGA | 2 cut(s) | 1990, 2179 |
| Cfr13I | GGNCC | 8 cut(s) | 362, 370, 710, 950, 1378, 1408, 1999, 2188 |
| CseI | GACGC | 2 cut(s) | 312, 405 |
| Csp6I | GTAC | 8 cut(s) | 126, 785, 1227, 1619, 1737, 1851, 1889, 2078 |
| CviQI | GTAC | 8 cut(s) | 126, 785, 1227, 1619, 1737, 1851, 1889, 2078 |
| DpnI | GATC | 3 cut(s) | 288, 1316, 1557 |
| DpnII | GATC | 3 cut(s) | 286, 1314, 1555 |
| DraI | TTTAAA | 1 cut(s) | 217 |
| EaeI | YGGCCR | 4 cut(s) | 777, 1021, 1382, 1938 |
| Eam1104I | CTCTTC | 1 cut(s) | 1746 |
| EarI | CTCTTC | 1 cut(s) | 1746 |
| Ecl136II | GAGCTC | 1 cut(s) | 198 |
| Eco130I | CCWWGG | 2 cut(s) | 1142, 1900 |
| Eco24I | GRGCYC | 2 cut(s) | 200, 2234 |
| Eco31I | GGTCTC | 1 cut(s) | 890 |
| Eco47I | GGWCC | 4 cut(s) | 362, 710, 950, 1378 |
| Eco53kI | GAGCTC | 1 cut(s) | 198 |
| Eco57I | CTGAAG | 1 cut(s) | 1875 |
| Eco81I | CCTNAGG | 2 cut(s) | 765, 1395 |
| Eco91I | GGTNACC | 2 cut(s) | 1052, 1827 |
| EcoICRI | GAGCTC | 1 cut(s) | 198 |
| EcoO65I | GGTNACC | 2 cut(s) | 1052, 1827 |
| EcoRII | CCWGG | 4 cut(s) | 4, 366, 1519, 2088 |
| EcoT14I | CCWWGG | 2 cut(s) | 1142, 1900 |
| EcoT22I | ATGCAT | 2 cut(s) | 849, 1444 |
| EcoT38I | GRGCYC | 2 cut(s) | 200, 2234 |
| ErhI | CCWWGG | 2 cut(s) | 1142, 1900 |
| Esp3I | CGTCTC | 1 cut(s) | 1578 |
| FaqI | GGGAC | 4 cut(s) | 318, 348, 408, 1644 |
| FauI | CCCGC | 1 cut(s) | 1958 |
| FauNDI | CATATG | 1 cut(s) | 676 |
| FblI | GTMKAC | 3 cut(s) | 799, 1148, 1692 |
| Fnu4HI | GCNGC | 5 cut(s) | 272, 793, 1213, 1369, 1489 |
| FokI | GGATG | 3 cut(s) | 488, 2096, 2147 |
| FriOI | GRGCYC | 2 cut(s) | 200, 2234 |
| Fsp4HI | GCNGC | 5 cut(s) | 272, 793, 1213, 1369, 1489 |
| FspBI | CTAG | 6 cut(s) | 987, 1044, 1100, 1364, 1734, 1782 |
| GluI | GCNGC | 5 cut(s) | 272, 793, 1213, 1369, 1489 |
| GsaI | CCCAGC | 1 cut(s) | 1322 |
| GsuI | CTGGAG | 2 cut(s) | 120, 1500 |
| HapII | CCGG | 2 cut(s) | 404, 1381 |
| HgaI | GACGC | 2 cut(s) | 312, 405 |
| HincII | GTYRAC | 3 cut(s) | 630, 1693, 1870 |
| HindII | GTYRAC | 3 cut(s) | 630, 1693, 1870 |
| HindIII | AAGCTT | 3 cut(s) | 1124, 1346, 1528 |
| HinfI | GANTC | 7 cut(s) | 92, 104, 189, 296, 311, 331, 1694 |
| HpaI | GTTAAC | 1 cut(s) | 630 |
| HpaII | CCGG | 2 cut(s) | 404, 1381 |
| Hpy166II | GTNNAC | 9 cut(s) | 76, 443, 630, 734, 800, 1149, 1227, 1693, 1870 |
| Hpy188I | TCNGA | 8 cut(s) | 166, 295, 898, 907, 1080, 1560, 1699, 1798 |
| Hpy8I | GTNNAC | 9 cut(s) | 76, 443, 630, 734, 800, 1149, 1227, 1693, 1870 |
| HpyAV | CCTTC | 8 cut(s) | 82, 225, 385, 990, 1460, 1740, 2000, 2189 |
| HpyCH4IV | ACGT | 1 cut(s) | 2047 |
| HpySE526I | ACGT | 1 cut(s) | 2047 |
| Kpn2I | TCCGGA | 1 cut(s) | 403 |
| KspAI | GTTAAC | 1 cut(s) | 630 |
| Kzo9I | GATC | 3 cut(s) | 286, 1314, 1555 |
| LmnI | GCTCC | 3 cut(s) | 203, 1449, 2229 |
| Lsp1109I | GCAGC | 4 cut(s) | 283, 779, 1199, 1500 |
| LweI | GCATC | 2 cut(s) | 1429, 1780 |
| MaeI | CTAG | 6 cut(s) | 987, 1044, 1100, 1364, 1734, 1782 |
| MaeII | ACGT | 1 cut(s) | 2047 |
| MaeIII | GTNAC | 8 cut(s) | 14, 315, 812, 956, 1052, 1827, 1946, 2060 |
| MalI | GATC | 3 cut(s) | 288, 1316, 1557 |
| MboI | GATC | 3 cut(s) | 286, 1314, 1555 |
| MboII | GAAGA | 7 cut(s) | 87, 575, 947, 950, 1626, 1763, 1868 |
| MfeI | CAATTG | 1 cut(s) | 1434 |
| MflI | RGATCY | 2 cut(s) | 286, 1314 |
| MhlI | GDGCHC | 3 cut(s) | 42, 200, 2234 |
| MlsI | TGGCCA | 1 cut(s) | 779 |
| MluCI | AATT | 4 cut(s) | 867, 944, 1181, 1434 |
| MluNI | TGGCCA | 1 cut(s) | 779 |
| MlyI | GAGTC | 2 cut(s) | 340, 1688 |
| Mox20I | TGGCCA | 1 cut(s) | 779 |
| Mph1103I | ATGCAT | 2 cut(s) | 849, 1444 |
| MroI | TCCGGA | 1 cut(s) | 403 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MscI | TGGCCA | 1 cut(s) | 779 |
| MslI | CAYNNNNRTG | 6 cut(s) | 279, 433, 1006, 1551, 2015, 2204 |
| Msp20I | TGGCCA | 1 cut(s) | 779 |
| MspA1I | CMGCKG | 1 cut(s) | 1491 |
| MspI | CCGG | 2 cut(s) | 404, 1381 |
| MspR9I | CCNGG | 4 cut(s) | 6, 368, 1521, 2090 |
| MunI | CAATTG | 1 cut(s) | 1434 |
| Mva1269I | GAATGC | 2 cut(s) | 464, 1203 |
| MvaI | CCWGG | 4 cut(s) | 6, 368, 1521, 2090 |
| NdeI | CATATG | 1 cut(s) | 676 |
| NdeII | GATC | 3 cut(s) | 286, 1314, 1555 |
| NlaIV | GGNNCC | 4 cut(s) | 364, 951, 1316, 2231 |
| NmeAIII | GCCGAG | 1 cut(s) | 1966 |
| NmuCI | GTSAC | 6 cut(s) | 14, 315, 956, 1827, 1946, 2060 |
| NsiI | ATGCAT | 2 cut(s) | 849, 1444 |
| NspI | RCATGY | 5 cut(s) | 151, 432, 438, 1546, 1748 |
| PagI | TCATGA | 2 cut(s) | 1990, 2179 |
| PasI | CCCWGGG | 1 cut(s) | 367 |
| PciI | ACATGT | 2 cut(s) | 147, 1744 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 320 |
| PctI | GAATGC | 2 cut(s) | 464, 1203 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 5 cut(s) | 92, 104, 189, 296, 311 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1575 |
| PkrI | GCNGC | 5 cut(s) | 273, 794, 1214, 1370, 1490 |
| PleI | GAGTC | 2 cut(s) | 339, 1688 |
| PpsI | GAGTC | 2 cut(s) | 339, 1688 |
| PscI | ACATGT | 2 cut(s) | 147, 1744 |
| PsiI | TTATAA | 1 cut(s) | 914 |
| Psp124BI | GAGCTC | 1 cut(s) | 200 |
| Psp6I | CCWGG | 4 cut(s) | 4, 366, 1519, 2088 |
| PspEI | GGTNACC | 2 cut(s) | 1052, 1827 |
| PspFI | CCCAGC | 1 cut(s) | 1318 |
| PspGI | CCWGG | 4 cut(s) | 4, 366, 1519, 2088 |
| PspN4I | GGNNCC | 4 cut(s) | 364, 951, 1316, 2231 |
| PspPI | GGNCC | 8 cut(s) | 362, 370, 710, 950, 1378, 1408, 1999, 2188 |
| PstI | CTGCAG | 1 cut(s) | 1678 |
| PsuI | RGATCY | 2 cut(s) | 286, 1314 |
| PvuII | CAGCTG | 1 cut(s) | 1491 |
| RsaI | GTAC | 8 cut(s) | 127, 786, 1228, 1620, 1738, 1852, 1890, 2079 |
| RsaNI | GTAC | 8 cut(s) | 126, 785, 1227, 1619, 1737, 1851, 1889, 2078 |
| RseI | CAYNNNNRTG | 6 cut(s) | 279, 433, 1006, 1551, 2015, 2204 |
| SacI | GAGCTC | 1 cut(s) | 200 |
| SalI | GTCGAC | 1 cut(s) | 1691 |
| SatI | GCNGC | 5 cut(s) | 272, 793, 1213, 1369, 1489 |
| Sau3AI | GATC | 3 cut(s) | 286, 1314, 1555 |
| Sau96I | GGNCC | 8 cut(s) | 362, 370, 710, 950, 1378, 1408, 1999, 2188 |
| ScaI | AGTACT | 1 cut(s) | 1738 |
| SchI | GAGTC | 2 cut(s) | 340, 1688 |
| ScrFI | CCNGG | 4 cut(s) | 6, 368, 1521, 2090 |
| SduI | GDGCHC | 3 cut(s) | 42, 200, 2234 |
| SfaNI | GCATC | 2 cut(s) | 1429, 1780 |
| SfcI | CTRYAG | 3 cut(s) | 469, 796, 1674 |
| SinI | GGWCC | 4 cut(s) | 362, 710, 950, 1378 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 279, 433, 1006, 1551, 2015, 2204 |
| SmlI | CTYRAG | 3 cut(s) | 449, 1304, 1418 |
| SmoI | CTYRAG | 3 cut(s) | 449, 1304, 1418 |
| Sse9I | AATT | 4 cut(s) | 867, 944, 1181, 1434 |
| SsiI | CCGC | 4 cut(s) | 932, 1108, 1369, 1965 |
| SspMI | CTAG | 6 cut(s) | 987, 1044, 1100, 1364, 1734, 1782 |
| SstI | GAGCTC | 1 cut(s) | 200 |
| StyD4I | CCNGG | 4 cut(s) | 4, 366, 1519, 2088 |
| StyI | CCWWGG | 2 cut(s) | 1142, 1900 |
| TaiI | ACGT | 1 cut(s) | 2050 |
| TaqI | TCGA | 4 cut(s) | 192, 888, 1207, 1692 |
| TasI | AATT | 4 cut(s) | 867, 944, 1181, 1434 |
| TatI | WGTACW | 6 cut(s) | 784, 1226, 1618, 1736, 1888, 2077 |
| TauI | GCSGC | 1 cut(s) | 1371 |
| TfiI | GAWTC | 5 cut(s) | 92, 104, 189, 296, 311 |
| TscAI | CASTG | 4 cut(s) | 1013, 1236, 1822, 2131 |
| TseFI | GTSAC | 6 cut(s) | 14, 315, 956, 1827, 1946, 2060 |
| TseI | GCWGC | 4 cut(s) | 271, 792, 1212, 1488 |
| Tsp45I | GTSAC | 6 cut(s) | 14, 315, 956, 1827, 1946, 2060 |
| TspGWI | ACGGA | 1 cut(s) | 201 |
| TspRI | CASTG | 4 cut(s) | 1013, 1236, 1822, 2131 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1575 |
| VpaK11BI | GGWCC | 4 cut(s) | 362, 710, 950, 1378 |
| XceI | RCATGY | 5 cut(s) | 151, 432, 438, 1546, 1748 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1576 |
| XmiI | GTMKAC | 3 cut(s) | 799, 1148, 1692 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 6 cut(s) | 987, 1044, 1100, 1364, 1734, 1782 |
| ZrmI | AGTACT | 1 cut(s) | 1738 |
| Zsp2I | ATGCAT | 2 cut(s) | 849, 1444 |