Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001648

Physical Location & Seq

Genomic Coordinates Forward (+)

435304 .. 441336

Gene Structure 6033 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG006100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGATGATGGCAAAAACACAAAGGTTTGTGGCGTGGGAGGAGCACATTCTGTGTCATGAGCGTGGTAACCGTGTGGTGCACTATTACTTGAAGAAGGCATCAGGGGAATCAGTCCTTGCTGTTATAGGGACTGAGAAGAGTATAAGGCACATGTTGTATGTTGTTTCAGACGAGTTCCTCGACACTTGCGGCTCCGAGGGATTCATCAATGCGTGTACCAGGTGGCGATCAAGAAGAGAAGTTGTACACTGGCTTGGATCCTTGCTCTCCAAGCGTTGCTGGTCCGAGGTTTCAAATTCACCGTCAAATGAAACAACAGAAGCTTTATCGCTTAATGGAGTCGGTGCTCGTCAAACTGATCAGATGGTTCCAAGGAAACTGAAGGGTCAAAATTCACATATTGAATGGTCTGGTGTTGCCTGGATTTGTGGCAAGCAGCTGAAGCACTACCCAGCATTTTGCAGGAATGGAACTACTGTTTCTGTCCATTCCTTTGTCTTCATTAGGGCTTTAGAAAAACATTACTACCTTGGTTATGTGGAAGACATGTATGAAGACAGGAAAGGGAAGAAAAAAGTTAAAGTGCGATGGTTTCACCACAGTAAGGAAGTGGAGGATGTAATCCCTGATCTGAACCCACACCCGAGAGAAGTTTTTATCACACCTCATGTACAGGTGATTAGTGCTGAGTGTATTGACGGTCCTGCAACAGTTTTAACTCCTAAGCATTATGAGAAATGTTTGGCTAGTGTTGCTCACAGTTCTTCATCTGGAGTCCATATGTGCTTTAGACAGCTTAAGAACCATGAGGTTAGGCCCTTCAGTCTTGCTAAGTTGCGGGGGTATTCTAATCAAGCAATCCTTTCTTCCTTACATTTTCCCCAAGTCTCCAAGAAAATAGTCAAGTGTGATATGTTATATGATAAAGATGAGGAAGAGCCAATACCTGGTGATCCCCTGAGGGTGAATTGTAAGAGAAATAGAAGCTATGAGGAGCATCAGGGACTTGCATCCGGTTATTCTAGTATCAGAAACTTGCATACCCAGAGTCAGCTGAAAAACTGCGTTCCAACATACCCAAAGTTGAAAATAAAACTATCAAGGAAAGCAATTGGAGTTGAGACTGTTGAATCTGTTCCCCAATGTCCAGTTTCTTTTAAGGTTGATGAGAAGATAGAACTGCTCTGTCAAGATAGTGGCATTCGAGGATGCTGGTTTAGGTGTAAGGTTTTGCAGACATCTCAGAAGCTTCTCAAAGTTCAATATGATGATGTGCAAGATGTAGATGGATCTGGTAATTTGGAGGAATGGGTCCCTGCTTTTAGAGTTGCTGCTCCTGATAAACTGGGCATGAGATGCTCAGGCCGCCTGACAATTCGGCCCTGCCACCCCAGTGATTCTGTCATGTCTTCTTTTGACGTTGGAGTACCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAAGGTGTTGTTGCTGGAGTTGACGTCTCTGGAACTGCTATACAAGTCTACTTCCCTGGTATGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet BAH

Protein Analysis

509

Amino Acids

57.72

Weight (kDa)

8.67

Isoelectric Point (pI)

44.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	159 - 248	1e-10	BAH domain
Agenet	PF05641	390 - 464	2.1e-17	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55600 AT5G55600 AT5G55600
fragaria_vesca	FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g00540 FvH4_3g29480 FvH4_3g29480 FvH4_3g29480
malus_domestica	MD00G1057800.v1.1 MD03G1186700.v1.1 MD10G1336900.v1.1 MD11G1201800.v1.1
prunus_persica	Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G006500_v2.0.a1 Prupe.4G239800_v2.0.a1 Prupe.4G239800_v2.0.a1
pyrus_communis	pycom03g13890 pycom05g32630 pycom10g28640 pycom11g17430
rosa_chinensis	RchiOBHm_Chr5g0000741 RchiOBHm_Chr5g0054361
rosa_laevigata	RLG00000030891 RLG00000034926
rosa_multiflora	Rmu_co8288121.1_g000001 Rmu_co8324391.1_g000001 Rmu_co8332439.1_g000001 Rmu_co8394963.1_g000001 Rmu_sc0000255.1_g000004
rosa_roxburghii	Rroxscaffold_1G00026510 Rroxscaffold_1G00075490
rosa_rugosa	Rorug04G0386200 Rorug05G0285800
rosa_samantha	Rh5AG006100 Rh5AG356300 Rh5BG007900 Rh5BG367900 Rh5CG006600 Rh5CG391200 Rh5DG006600 Rh5DG382100
rosa_wichuraiana	Rw5G000620 Rw5G033470 Rw5G033640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1488
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccI	GTMKAC	1 cut(s)	1509
AciI	CCGC	3 cut(s)	189, 838, 1366
AclWI	GGATC	4 cut(s)	252, 265, 947, 1297
AcsI	RAATTY	2 cut(s)	295, 391
AcuI	CTGAAG	3 cut(s)	401, 461, 805
AcyI	GRCGYC	1 cut(s)	1485
AfaI	GTAC	4 cut(s)	217, 246, 672, 1428
AfiI	CCNNNNNNNGG	2 cut(s)	604, 947
AflII	CTTAAG	1 cut(s)	797
AflIII	ACRYGT	2 cut(s)	150, 546
AgsI	TTSAA	6 cut(s)	91, 294, 404, 1087, 1130, 1262
AjnI	CCWGG	4 cut(s)	218, 419, 946, 1516
AleI	CACNNNNGTG	1 cut(s)	1392
AluBI	AGCT	6 cut(s)	323, 439, 796, 987, 1054, 1249
AluI	AGCT	6 cut(s)	323, 439, 796, 987, 1054, 1249
Alw21I	GWGCWC	3 cut(s)	45, 81, 349
Alw26I	GTCTC	3 cut(s)	892, 1115, 1492
Alw44I	GTGCAC	1 cut(s)	77
AlwI	GGATC	4 cut(s)	252, 265, 947, 1297
Ama87I	CYCGRG	1 cut(s)	643
AoxI	GGCC	3 cut(s)	815, 1363, 1379
ApaLI	GTGCAC	1 cut(s)	77
ApeKI	GCWGC	2 cut(s)	436, 1331
ApoI	RAATTY	2 cut(s)	295, 391
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
Asp700I	GAANNNNTTC	1 cut(s)	1134
AspS9I	GGNCC	5 cut(s)	282, 701, 816, 1312, 1380
AsuHPI	GGTGA	5 cut(s)	291, 587, 688, 962, 976
AvaI	CYCGRG	1 cut(s)	643
AvaII	GGWCC	3 cut(s)	282, 701, 1312
AxyI	CCTNAGG	1 cut(s)	959
BaeGI	GKGCMC	1 cut(s)	81
BamHI	GGATCC	1 cut(s)	257
BarI	GAAGNNNNNNTAC	2 cut(s)	927, 959
BbsI	GAAGAC	4 cut(s)	490, 549, 561, 1401
Bbv12I	GWGCWC	3 cut(s)	45, 81, 349
BbvI	GCAGC	2 cut(s)	448, 1318
BccI	CCATC	4 cut(s)	358, 582, 1280, 1445
BciT130I	CCWGG	4 cut(s)	220, 421, 948, 1518
BclI	TGATCA	1 cut(s)	358
BcoDI	GTCTC	3 cut(s)	892, 1115, 1492
BfaI	CTAG	2 cut(s)	747, 1023
BfrI	CTTAAG	1 cut(s)	797
BisI	GCNGC	4 cut(s)	190, 437, 1332, 1366
BlsI	GCNGC	4 cut(s)	191, 438, 1333, 1367
Bme1390I	CCNGG	4 cut(s)	220, 421, 948, 1518
Bme18I	GGWCC	3 cut(s)	282, 701, 1312
BmeT110I	CYCGRG	1 cut(s)	643
BmgT120I	GGNCC	5 cut(s)	282, 701, 816, 1312, 1380
BmiI	GGNNCC	5 cut(s)	193, 259, 369, 1313, 1314
BmrFI	CCNGG	4 cut(s)	220, 421, 948, 1518
BmrI	ACTGGG	2 cut(s)	1355, 1386
BmsI	GCATC	6 cut(s)	107, 1006, 1019, 1199, 1346, 1426
BmuI	ACTGGG	2 cut(s)	1355, 1386
BpiI	GAAGAC	4 cut(s)	490, 549, 561, 1401
BpmI	CTGGAG	2 cut(s)	792, 1497
Bpu10I	CCTNAGC	2 cut(s)	723, 1360
BsaHI	GRCGYC	1 cut(s)	1485
BsaJI	CCNNGG	5 cut(s)	195, 285, 371, 529, 1516
BsaWI	WCCGGW	1 cut(s)	1013
BsaXI	ACNNNNNCTCC	4 cut(s)	1416, 1446, 1470, 1500
Bsc4I	CCNNNNNNNGG	2 cut(s)	604, 947
Bse1I	ACTGG	5 cut(s)	254, 1148, 1350, 1392, 1430
Bse21I	CCTNAGG	1 cut(s)	959
BseBI	CCWGG	4 cut(s)	220, 421, 948, 1518
BseDI	CCNNGG	5 cut(s)	195, 285, 371, 529, 1516
BseGI	GGATG	3 cut(s)	622, 1010, 1214
BseLI	CCNNNNNNNGG	2 cut(s)	604, 947
BseMII	CTCAG	5 cut(s)	123, 678, 950, 1256, 1374
BseNI	ACTGG	5 cut(s)	254, 1148, 1350, 1392, 1430
BseRI	GAGGAG	2 cut(s)	53, 1007
BseSI	GKGCMC	1 cut(s)	81
BseXI	GCAGC	2 cut(s)	448, 1318
BseYI	CCCAGC	1 cut(s)	451
BshFI	GGCC	3 cut(s)	817, 1365, 1381
BsiHKAI	GWGCWC	3 cut(s)	45, 81, 349
BsiHKCI	CYCGRG	1 cut(s)	643
BsiSI	CCGG	1 cut(s)	1014
BslFI	GGGAC	3 cut(s)	142, 1017, 1298
BslI	CCNNNNNNNGG	2 cut(s)	604, 947
BsmAI	GTCTC	3 cut(s)	892, 1115, 1492
BsmBI	CGTCTC	1 cut(s)	1492
BsmFI	GGGAC	3 cut(s)	142, 1017, 1298
BsmI	GAATGC	1 cut(s)	1200
BsnI	GGCC	3 cut(s)	817, 1365, 1381
BsoBI	CYCGRG	1 cut(s)	643
Bsp1286I	GDGCHC	3 cut(s)	45, 81, 349
Bsp1407I	TGTACA	2 cut(s)	244, 670
Bsp143I	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
BspACI	CCGC	3 cut(s)	189, 838, 1366
BspANI	GGCC	3 cut(s)	817, 1365, 1381
BspCNI	CTCAG	5 cut(s)	124, 679, 951, 1255, 1373
BspHI	TCATGA	1 cut(s)	55
BspLI	GGNNCC	5 cut(s)	193, 259, 369, 1313, 1314
BspPI	GGATC	4 cut(s)	252, 265, 947, 1297
BspQI	GCTCTTC	1 cut(s)	930
BspTI	CTTAAG	1 cut(s)	797
BsrGI	TGTACA	2 cut(s)	244, 670
BsrI	ACTGG	5 cut(s)	254, 1148, 1350, 1392, 1430
BssECI	CCNNGG	5 cut(s)	195, 285, 371, 529, 1516
BssMI	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
BssNI	GRCGYC	1 cut(s)	1485
BssT1I	CCWWGG	2 cut(s)	371, 529
Bst2UI	CCWGG	4 cut(s)	220, 421, 948, 1518
Bst4CI	ACNGT	8 cut(s)	71, 303, 478, 602, 701, 712, 761, 1126
Bst6I	CTCTTC	3 cut(s)	131, 229, 930
BstACI	GRCGYC	1 cut(s)	1485
BstAFI	CTTAAG	1 cut(s)	797
BstAPI	GCANNNNNTGC	1 cut(s)	1356
BstAUI	TGTACA	2 cut(s)	244, 670
BstC8I	GCNNGC	1 cut(s)	434
BstDEI	CTNAG	7 cut(s)	132, 687, 723, 831, 959, 1242, 1360
BstEII	GGTNACC	1 cut(s)	65
BstF5I	GGATG	3 cut(s)	622, 1010, 1214
BstKTI	GATC	6 cut(s)	230, 260, 361, 631, 955, 1292
BstMAI	GTCTC	3 cut(s)	892, 1115, 1492
BstMBI	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
BstMWI	GCNNNNNNNGC	5 cut(s)	271, 442, 752, 1356, 1365
BstNI	CCWGG	4 cut(s)	220, 421, 948, 1518
BstNSI	RCATGY	2 cut(s)	154, 550
BstPI	GGTNACC	1 cut(s)	65
BstSCI	CCNGG	4 cut(s)	218, 419, 946, 1516
BstSLI	GKGCMC	1 cut(s)	81
BstV1I	GCAGC	2 cut(s)	448, 1318
BstV2I	GAAGAC	4 cut(s)	490, 549, 561, 1401
BstX2I	RGATCY	2 cut(s)	257, 1289
BstYI	RGATCY	2 cut(s)	257, 1289
Bsu36I	CCTNAGG	1 cut(s)	959
BsuRI	GGCC	3 cut(s)	817, 1365, 1381
BtgZI	GCGATG	1 cut(s)	601
BtsCI	GGATG	3 cut(s)	622, 1010, 1214
BtsIMutI	CAGTG	2 cut(s)	247, 1399
Cac8I	GCNNGC	1 cut(s)	434
CciI	TCATGA	1 cut(s)	55
Cfr13I	GGNCC	5 cut(s)	282, 701, 816, 1312, 1380
CsiI	ACCWGGT	2 cut(s)	218, 946
Csp6I	GTAC	4 cut(s)	216, 245, 671, 1427
CviAII	CATG	8 cut(s)	56, 151, 547, 668, 806, 1351, 1405, 1440
CviQI	GTAC	4 cut(s)	216, 245, 671, 1427
DdeI	CTNAG	7 cut(s)	132, 687, 723, 831, 959, 1242, 1360
DpnI	GATC	6 cut(s)	229, 259, 360, 630, 954, 1291
DpnII	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
Eam1104I	CTCTTC	3 cut(s)	131, 229, 930
EarI	CTCTTC	3 cut(s)	131, 229, 930
Eco130I	CCWWGG	2 cut(s)	371, 529
Eco47I	GGWCC	3 cut(s)	282, 701, 1312
Eco57I	CTGAAG	3 cut(s)	401, 461, 805
Eco81I	CCTNAGG	1 cut(s)	959
Eco88I	CYCGRG	1 cut(s)	643
Eco91I	GGTNACC	1 cut(s)	65
EcoO109I	RGGNCCY	2 cut(s)	816, 1312
EcoO65I	GGTNACC	1 cut(s)	65
EcoRII	CCWGG	4 cut(s)	218, 419, 946, 1516
EcoT14I	CCWWGG	2 cut(s)	371, 529
EcoT22I	ATGCAT	1 cut(s)	1441
ErhI	CCWWGG	2 cut(s)	371, 529
Esp3I	CGTCTC	1 cut(s)	1492
FaeI	CATG	8 cut(s)	59, 154, 550, 671, 809, 1354, 1408, 1443
FalI	AAGNNNNNCTT	2 cut(s)	846, 878
FaqI	GGGAC	3 cut(s)	142, 1017, 1298
FatI	CATG	8 cut(s)	55, 150, 546, 667, 805, 1350, 1404, 1439
FauI	CCCGC	1 cut(s)	831
FauNDI	CATATG	1 cut(s)	780
FbaI	TGATCA	1 cut(s)	358
FblI	GTMKAC	1 cut(s)	1509
Fnu4HI	GCNGC	4 cut(s)	190, 437, 1332, 1366
FokI	GGATG	3 cut(s)	629, 997, 1221
Fsp4HI	GCNGC	4 cut(s)	190, 437, 1332, 1366
FspBI	CTAG	2 cut(s)	747, 1023
GluI	GCNGC	4 cut(s)	190, 437, 1332, 1366
GsaI	CCCAGC	1 cut(s)	455
GsuI	CTGGAG	2 cut(s)	792, 1497
HaeIII	GGCC	3 cut(s)	817, 1365, 1381
HapII	CCGG	1 cut(s)	1014
Hin1I	GRCGYC	1 cut(s)	1485
Hin1II	CATG	8 cut(s)	59, 154, 550, 671, 809, 1354, 1408, 1443
HincII	GTYRAC	1 cut(s)	1483
HindII	GTYRAC	1 cut(s)	1483
HindIII	AAGCTT	2 cut(s)	321, 1247
HinfI	GANTC	7 cut(s)	107, 201, 339, 774, 1048, 1130, 1397
HpaII	CCGG	1 cut(s)	1014
HphI	GGTGA	5 cut(s)	291, 587, 688, 962, 976
Hpy166II	GTNNAC	5 cut(s)	79, 216, 247, 1483, 1510
Hpy188I	TCNGA	8 cut(s)	169, 196, 286, 363, 633, 1031, 1245, 1529
Hpy188III	TCNNGA	6 cut(s)	56, 231, 771, 1190, 1337, 1491
Hpy8I	GTNNAC	5 cut(s)	79, 216, 247, 1483, 1510
HpyAV	CCTTC	4 cut(s)	88, 376, 829, 1457
HpyCH4III	ACNGT	8 cut(s)	71, 303, 478, 602, 701, 712, 761, 1126
HpyCH4IV	ACGT	2 cut(s)	1419, 1485
HpyCH4V	TGCA	8 cut(s)	79, 462, 707, 1010, 1039, 1234, 1276, 1439
HpyF10VI	GCNNNNNNNGC	5 cut(s)	271, 442, 752, 1356, 1365
HpyF3I	CTNAG	7 cut(s)	132, 687, 723, 831, 959, 1242, 1360
HpySE526I	ACGT	2 cut(s)	1419, 1485
Hsp92I	GRCGYC	1 cut(s)	1485
Hsp92II	CATG	8 cut(s)	59, 154, 550, 671, 809, 1354, 1408, 1443
KflI	GGGWCCC	1 cut(s)	1312
Ksp22I	TGATCA	1 cut(s)	358
Kzo9I	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
LguI	GCTCTTC	1 cut(s)	930
LmnI	GCTCC	4 cut(s)	40, 197, 994, 1339
Lsp1109I	GCAGC	2 cut(s)	448, 1318
LweI	GCATC	6 cut(s)	107, 1006, 1019, 1199, 1346, 1426
MabI	ACCWGGT	2 cut(s)	218, 946
MaeI	CTAG	2 cut(s)	747, 1023
MaeII	ACGT	2 cut(s)	1419, 1485
MaeIII	GTNAC	1 cut(s)	65
MalI	GATC	6 cut(s)	229, 259, 360, 630, 954, 1291
MboI	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	2 cut(s)	257, 1289
MhlI	GDGCHC	3 cut(s)	45, 81, 349
MluCI	AATT	6 cut(s)	295, 391, 967, 1110, 1297, 1374
MlyI	GAGTC	3 cut(s)	348, 783, 1057
MmeI	TCCRAC	2 cut(s)	1094, 1402
Mph1103I	ATGCAT	1 cut(s)	1441
MroXI	GAANNNNTTC	1 cut(s)	1134
MseI	TTAA	5 cut(s)	333, 579, 716, 798, 1158
MslI	CAYNNNNRTG	2 cut(s)	60, 1392
MspA1I	CMGCKG	2 cut(s)	439, 1054
MspCI	CTTAAG	1 cut(s)	797
MspI	CCGG	1 cut(s)	1014
MspR9I	CCNGG	4 cut(s)	220, 421, 948, 1518
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	1 cut(s)	1200
MvaI	CCWGG	4 cut(s)	220, 421, 948, 1518
MwoI	GCNNNNNNNGC	5 cut(s)	271, 442, 752, 1356, 1365
NdeI	CATATG	1 cut(s)	780
NdeII	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
NlaIII	CATG	8 cut(s)	59, 154, 550, 671, 809, 1354, 1408, 1443
NlaIV	GGNNCC	5 cut(s)	193, 259, 369, 1313, 1314
NsiI	ATGCAT	1 cut(s)	1441
NspI	RCATGY	2 cut(s)	154, 550
OliI	CACNNNNGTG	1 cut(s)	1392
PagI	TCATGA	1 cut(s)	55
PciI	ACATGT	2 cut(s)	150, 546
PciSI	GCTCTTC	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	1 cut(s)	1200
PdmI	GAANNNNTTC	1 cut(s)	1134
PfeI	GAWTC	4 cut(s)	107, 201, 1130, 1397
PflMI	CCANNNNNTGG	1 cut(s)	947
PkrI	GCNGC	4 cut(s)	191, 438, 1333, 1367
PleI	GAGTC	3 cut(s)	347, 782, 1056
PpsI	GAGTC	3 cut(s)	347, 782, 1056
PpuMI	RGGWCCY	1 cut(s)	1312
PscI	ACATGT	2 cut(s)	150, 546
Psp5II	RGGWCCY	1 cut(s)	1312
Psp6I	CCWGG	4 cut(s)	218, 419, 946, 1516
PspEI	GGTNACC	1 cut(s)	65
PspFI	CCCAGC	1 cut(s)	451
PspGI	CCWGG	4 cut(s)	218, 419, 946, 1516
PspN4I	GGNNCC	5 cut(s)	193, 259, 369, 1313, 1314
PspPI	GGNCC	5 cut(s)	282, 701, 816, 1312, 1380
PspPPI	RGGWCCY	1 cut(s)	1312
PsuI	RGATCY	2 cut(s)	257, 1289
PvuII	CAGCTG	2 cut(s)	439, 1054
RsaI	GTAC	4 cut(s)	217, 246, 672, 1428
RsaNI	GTAC	4 cut(s)	216, 245, 671, 1427
RseI	CAYNNNNRTG	2 cut(s)	60, 1392
SapI	GCTCTTC	1 cut(s)	930
SaqAI	TTAA	5 cut(s)	333, 579, 716, 798, 1158
SatI	GCNGC	4 cut(s)	190, 437, 1332, 1366
Sau3AI	GATC	6 cut(s)	227, 257, 358, 628, 952, 1289
Sau96I	GGNCC	5 cut(s)	282, 701, 816, 1312, 1380
SchI	GAGTC	3 cut(s)	348, 783, 1057
ScrFI	CCNGG	4 cut(s)	220, 421, 948, 1518
SduI	GDGCHC	3 cut(s)	45, 81, 349
SexAI	ACCWGGT	2 cut(s)	218, 946
SfaNI	GCATC	6 cut(s)	107, 1006, 1019, 1199, 1346, 1426
SinI	GGWCC	3 cut(s)	282, 701, 1312
SmiMI	CAYNNNNRTG	2 cut(s)	60, 1392
SmlI	CTYRAG	1 cut(s)	797
SmoI	CTYRAG	1 cut(s)	797
Sse9I	AATT	6 cut(s)	295, 391, 967, 1110, 1297, 1374
SsiI	CCGC	3 cut(s)	189, 838, 1366
SspMI	CTAG	2 cut(s)	747, 1023
StyD4I	CCNGG	4 cut(s)	218, 419, 946, 1516
StyI	CCWWGG	2 cut(s)	371, 529
TaaI	ACNGT	8 cut(s)	71, 303, 478, 602, 701, 712, 761, 1126
TaiI	ACGT	2 cut(s)	1422, 1488
TaqI	TCGA	2 cut(s)	180, 1204
TasI	AATT	6 cut(s)	295, 391, 967, 1110, 1297, 1374
TatI	WGTACW	2 cut(s)	244, 670
TauI	GCSGC	2 cut(s)	192, 1368
TfiI	GAWTC	4 cut(s)	107, 201, 1130, 1397
Tru1I	TTAA	5 cut(s)	333, 579, 716, 798, 1158
Tru9I	TTAA	5 cut(s)	333, 579, 716, 798, 1158
TscAI	CASTG	2 cut(s)	254, 1399
TseI	GCWGC	2 cut(s)	436, 1331
TspDTI	ATGAA	5 cut(s)	193, 324, 490, 567, 756
TspRI	CASTG	2 cut(s)	254, 1399
Van91I	CCANNNNNTGG	1 cut(s)	947
Vha464I	CTTAAG	1 cut(s)	797
VneI	GTGCAC	1 cut(s)	77
VpaK11BI	GGWCC	3 cut(s)	282, 701, 1312
XapI	RAATTY	2 cut(s)	295, 391
XceI	RCATGY	2 cut(s)	154, 550
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1437
XmiI	GTMKAC	1 cut(s)	1509
XmnI	GAANNNNTTC	1 cut(s)	1134
XspI	CTAG	2 cut(s)	747, 1023
ZraI	GACGTC	1 cut(s)	1486
Zsp2I	ATGCAT	1 cut(s)	1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.