Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003193

Physical Location & Seq

Genomic Coordinates Forward (+)

696769 .. 702742

Gene Structure 5974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGACCATTTTCCGACGAATTATACTCAGAACAGCTCGTACACGGTGGTCAGTCCCCCAAAGCCTAAACCCTCCTCCACGTGCCTGCTCACGTGACGTCCGCCTTCTCTGCCACCGGTGTTTTGAGCAGCCATATCATTCCGATGCATCCGAAATTCAAGTGCCGAAGTTTGTGCCAGGCCGGGGTGGTCCCGGCGGGCGGTATCTCATGTATCCAGCTGTTTTGGCCGGTTTGATTGGACTTGGAGGTTTGGAGGTGGCTTATGCAGATGCTGAGGAGGCTGCTTCGAAGCAGGGTTTTCCTGCTGATGCCCCTGTGAGTAACAATGTGGAGGACATTGCCAAGAAACAGAGACAAGATATTGAAGACCGGCTCAAGAGTAAAGGGATGCGACGTGGTACTTATCCCAACTTTACTGTTTCTGTCAAGGGGCAAAAGGTAACCGTCAAGTTCCAAATTCCTCCTTCATGTGAAGCTTCACAAGTGATTGCAAATATTGCTTCTAATCTTGGCTTGAAAGTTGAAGAGAATGGCGGTGGTTCAGATATATCATTACGCGCTTGGGACAGTGGAGTTGCTTGGCAACTAATGCTTATGCACCCAGAGAAAAAGAAGAAAACTGAAGGTGATCAGGGGGAAGTAAAAGACGTGAATGAGCATGAGCGAGATCTGCACATCCTTGTTTTCCGTTCAGTCATTTCCTCAACAGAAAAAACCGAAATTGAATTTATGAAGCAGGGCAGCTTGAGTCTCGAAGAACTTGATGCTCTAATATCAGCTTTACAACTAGCTGGGGCACAGAAGAGCTTCATCCACCAGAAAAATGATACTTCTACCACAAAACGAAGAGCGAGGGAAGGCAGTGCAGAAACTTCAGCTATAGAGAAATTAATAACCAGTCTAGAGTCCATGGGAGTAAGAGTTTATGGAGTTGATGAATCCAATGTGAGTTCTGCAAGCAAAGATATTTCATGGGATAATCTTGCTGGATATGATCTGCAAAAGAGACAGATAGAAGACACGATACTACTGGCTTTGCTTAGTCCTGAAACATATGATGATATTGCTCGTGGAACTCGTCGCAAATATGAGTCAAACAGACCTCGAGCTGTACTTTTCGAAGGCCCACCAGGGACAGGGAAAACTTCTTCTGCTCGTGTCATTGCTAATCAAGCGGGCGTCCCAATGTTATATGTGCCCCTTGAGGTTATCTTGTCAAAGTACTATGGTGAGAGTGAGCGATTATTAGGCAAGGTGTTTTCACTTGCTAATGAACTCCCAAATGGTGCTATCATTTTTCTTGATGAGGTTGACTCCTTTGCTACTTCGCGAGATAGTGATTTGCATGAAGCCACACGGAGAGTTTTATCAGTTTTGCTGCGGCAGATTGATGGATTTGAACAGGATAAGAAAGTGGTTGTGATTGCTGCGACAAATAGGAAGCAAGACCTTGACCCGGCCTTGATCAGTCGGTTTGATTCAATTATCCTATTTGGCCTACCTGATCATCAAAATCGTAAGGAAATAGCAGCTCAATATGCAAAGCATCTAACTCAACCTGAATTAGATGAATTGGCAACAGTAACAGAAGAGATGTCCGGAAGGGATATCAGAGACGTGTGTCAACAAGCAGAGCGGTCGTGGGCATCAAAGCTGATCCGAGGACTAGTTCCCAAAGACGGAGACCAAATCCGTCTGCCTCCTCTGCCGGAATACATAGCGAGTGCCATGAATCGTCACAAGGGTTTACTCCGCTCCCCGCGCCAACAAACCCAAAATTCCAAGTCCGACATAAAGAAGGCCCGCGTTGTACTCGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

AAA

Protein Analysis

607

Amino Acids

67.33

Weight (kDa)

8.36

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	371 - 499	1.1e-36	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	371 - 492	8e-07	AAA domain (dynein-related subfamily)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04180 AT4G04180
fragaria_vesca	FvH4_3g01380 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890
malus_domestica	MD10G1327000.v1.1 MD10G1327200.v1.1
prunus_persica	Prupe.4G014800_v2.0.a1 Prupe.4G015000_v2.0.a1 Prupe.4G015000_v2.0.a1
pyrus_communis	pycom10g27670
rosa_chinensis	RchiOBHm_Chr5g0002011 RchiOBHm_Chr5g0002051
rosa_laevigata	RLG00000025404 RLG00000030988 RLG00000030992
rosa_multiflora	Rmu_sc0000378.1_g000019 Rmu_sc0012328.1_g000001 Rmu_sc0017901.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074350 Rroxscaffold_6G00424700
rosa_rugosa	Rorug04G0394300
rosa_samantha	Rh3DG064500 Rh5AG015500 Rh5AG015700 Rh5AG015800 Rh5BG019100 Rh5CG016800 Rh5CG017100 Rh5DG017400
rosa_wichuraiana	Rw5G001520 Rw5G001540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	99
AccBSI	CCGCTC	2 cut(s)	1636, 1755
AccII	CGCG	4 cut(s)	558, 1330, 1762, 1806
AccIII	TCCGGA	1 cut(s)	1598
AclWI	GGATC	1 cut(s)	1651
AcoI	YGGCCR	1 cut(s)	225
AcsI	RAATTY	4 cut(s)	153, 456, 725, 1777
AcuI	CTGAAG	2 cut(s)	642, 858
AcvI	CACGTG	2 cut(s)	80, 92
AcyI	GRCGYC	2 cut(s)	96, 1179
AfaI	GTAC	5 cut(s)	40, 400, 1113, 1223, 1812
AfiI	CCNNNNNNNGG	5 cut(s)	182, 198, 1136, 1456, 1679
AflIII	ACRYGT	1 cut(s)	1617
AgeI	ACCGGT	1 cut(s)	114
AgsI	TTSAA	7 cut(s)	158, 365, 517, 524, 725, 1400, 1482
AhlI	ACTAGT	1 cut(s)	1666
AjiI	CACGTC	3 cut(s)	395, 649, 1618
AjnI	CCWGG	2 cut(s)	175, 1129
Alw26I	GTCTC	5 cut(s)	346, 755, 1000, 1608, 1677
AlwI	GGATC	1 cut(s)	1651
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	1 cut(s)	1104
Aor13HI	TCCGGA	1 cut(s)	1598
AoxI	GGCC	6 cut(s)	178, 225, 1123, 1458, 1495, 1800
ApeKI	GCWGC	6 cut(s)	127, 281, 741, 1378, 1427, 1529
ApoI	RAATTY	4 cut(s)	153, 456, 725, 1777
AseI	ATTAAT	1 cut(s)	890
AsiGI	ACCGGT	1 cut(s)	114
Asp700I	GAANNNNTTC	1 cut(s)	806
AspLEI	GCGC	2 cut(s)	560, 1764
AspS9I	GGNCC	3 cut(s)	188, 1124, 1801
AsuC2I	CCSGG	3 cut(s)	182, 192, 1457
AsuHPI	GGTGA	2 cut(s)	638, 1241
AsuII	TTCGAA	2 cut(s)	287, 1119
AvaI	CYCGRG	1 cut(s)	1104
AvaII	GGWCC	1 cut(s)	188
BaeGI	GKGCMC	2 cut(s)	799, 1200
BarI	GAAGNNNNNNTAC	2 cut(s)	1008, 1040
BauI	CACGAG	2 cut(s)	1068, 1155
BbrPI	CACGTG	2 cut(s)	80, 92
BbsI	GAAGAC	2 cut(s)	372, 1023
BbvCI	CCTCAGC	1 cut(s)	273
BbvI	GCAGC	6 cut(s)	139, 268, 753, 1365, 1414, 1541
BccI	CCATC	1 cut(s)	1385
BcgI	CGANNNNNNTGC	4 cut(s)	154, 188, 1620, 1654
BciT130I	CCWGG	2 cut(s)	177, 1131
BciVI	GTATCC	1 cut(s)	222
BclI	TGATCA	3 cut(s)	628, 1464, 1504
BcnI	CCSGG	3 cut(s)	182, 192, 1457
BcoDI	GTCTC	5 cut(s)	346, 755, 1000, 1608, 1677
BcuI	ACTAGT	1 cut(s)	1666
BfaI	CTAG	3 cut(s)	788, 902, 1667
BfmI	CTRYAG	1 cut(s)	879
BfuI	GTATCC	1 cut(s)	222
BglII	AGATCT	1 cut(s)	667
BisI	GCNGC	7 cut(s)	128, 282, 742, 1379, 1382, 1428, 1530
BlsI	GCNGC	7 cut(s)	129, 283, 743, 1380, 1383, 1429, 1531
BmcAI	AGTACT	1 cut(s)	1223
Bme1390I	CCNGG	5 cut(s)	177, 182, 192, 1131, 1457
Bme18I	GGWCC	1 cut(s)	188
BmeT110I	CYCGRG	1 cut(s)	1104
BmgBI	CACGTC	3 cut(s)	395, 649, 1618
BmgT120I	GGNCC	3 cut(s)	188, 1124, 1801
BmiI	GGNNCC	1 cut(s)	190
BmrFI	CCNGG	5 cut(s)	177, 182, 192, 1131, 1457
BmsI	GCATC	8 cut(s)	133, 155, 259, 298, 378, 754, 1555, 1655
BoxI	GACNNNNGTC	1 cut(s)	1620
BpiI	GAAGAC	2 cut(s)	372, 1023
BplI	GAGNNNNNCTC	2 cut(s)	1298, 1330
Bpu10I	CCTNAGC	1 cut(s)	273
Bpu14I	TTCGAA	2 cut(s)	287, 1119
BpuEI	CTTGAG	3 cut(s)	359, 766, 1223
BpuMI	CCSGG	3 cut(s)	182, 192, 1457
BsaAI	YACGTR	2 cut(s)	80, 92
BsaHI	GRCGYC	2 cut(s)	96, 1179
BsaI	GGTCTC	1 cut(s)	1677
BsaJI	CCNNGG	4 cut(s)	181, 909, 1130, 1660
BsaWI	WCCGGW	2 cut(s)	114, 1598
BsaXI	ACNNNNNCTCC	2 cut(s)	906, 936
Bsc4I	CCNNNNNNNGG	5 cut(s)	182, 198, 1136, 1456, 1679
Bse118I	RCCGGY	3 cut(s)	114, 227, 369
Bse1I	ACTGG	2 cut(s)	897, 1035
Bse3DI	GCAATG	2 cut(s)	336, 1161
BseAI	TCCGGA	1 cut(s)	1598
BseBI	CCWGG	2 cut(s)	177, 1131
BseDI	CCNNGG	4 cut(s)	181, 909, 1130, 1660
BseGI	GGATG	4 cut(s)	146, 393, 675, 810
BseLI	CCNNNNNNNGG	5 cut(s)	182, 198, 1136, 1456, 1679
BseMI	GCAATG	2 cut(s)	336, 1161
BseMII	CTCAG	2 cut(s)	40, 264
BseNI	ACTGG	2 cut(s)	897, 1035
BseRI	GAGGAG	3 cut(s)	63, 290, 1692
BseSI	GKGCMC	2 cut(s)	799, 1200
BseXI	GCAGC	6 cut(s)	139, 268, 753, 1365, 1414, 1541
BseYI	CCCAGC	1 cut(s)	791
BsgI	GTGCAG	2 cut(s)	656, 885
Bsh1236I	CGCG	4 cut(s)	558, 1330, 1762, 1806
Bsh1285I	CGRYCG	1 cut(s)	1640
BshFI	GGCC	6 cut(s)	180, 227, 1125, 1460, 1497, 1802
BshTI	ACCGGT	1 cut(s)	114
BsiEI	CGRYCG	1 cut(s)	1640
BsiHKCI	CYCGRG	1 cut(s)	1104
BsiSI	CCGG	8 cut(s)	115, 181, 192, 228, 370, 1457, 1599, 1709
BslFI	GGGAC	5 cut(s)	38, 174, 578, 1147, 1166
BslI	CCNNNNNNNGG	5 cut(s)	182, 198, 1136, 1456, 1679
BsmAI	GTCTC	5 cut(s)	346, 755, 1000, 1608, 1677
BsmBI	CGTCTC	1 cut(s)	1608
BsmFI	GGGAC	5 cut(s)	38, 174, 578, 1147, 1166
BsnI	GGCC	6 cut(s)	180, 227, 1125, 1460, 1497, 1802
Bso31I	GGTCTC	1 cut(s)	1677
BsoBI	CYCGRG	1 cut(s)	1104
Bsp119I	TTCGAA	2 cut(s)	287, 1119
Bsp1286I	GDGCHC	2 cut(s)	799, 1200
Bsp13I	TCCGGA	1 cut(s)	1598
Bsp143I	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
Bsp19I	CCATGG	1 cut(s)	909
Bsp68I	TCGCGA	1 cut(s)	1330
BspANI	GGCC	6 cut(s)	180, 227, 1125, 1460, 1497, 1802
BspCNI	CTCAG	2 cut(s)	39, 265
BspEI	TCCGGA	1 cut(s)	1598
BspFNI	CGCG	4 cut(s)	558, 1330, 1762, 1806
BspLI	GGNNCC	1 cut(s)	190
BspPI	GGATC	1 cut(s)	1651
BspQI	GCTCTTC	2 cut(s)	797, 841
BspT104I	TTCGAA	2 cut(s)	287, 1119
BspTNI	GGTCTC	1 cut(s)	1677
BsrBI	CCGCTC	2 cut(s)	1636, 1755
BsrDI	GCAATG	2 cut(s)	336, 1161
BsrFI	RCCGGY	3 cut(s)	114, 227, 369
BsrI	ACTGG	2 cut(s)	897, 1035
BssAI	RCCGGY	3 cut(s)	114, 227, 369
BssECI	CCNNGG	4 cut(s)	181, 909, 1130, 1660
BssMI	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
BssNI	GRCGYC	2 cut(s)	96, 1179
BssSI	CACGAG	2 cut(s)	1068, 1155
BssT1I	CCWWGG	1 cut(s)	909
Bst2BI	CACGAG	2 cut(s)	1068, 1155
Bst2UI	CCWGG	2 cut(s)	177, 1131
Bst4CI	ACNGT	5 cut(s)	45, 418, 445, 569, 1582
Bst6I	CTCTTC	4 cut(s)	519, 797, 841, 1584
BstACI	GRCGYC	2 cut(s)	96, 1179
BstAPI	GCANNNNNTGC	2 cut(s)	497, 589
BstBAI	YACGTR	2 cut(s)	80, 92
BstBI	TTCGAA	2 cut(s)	287, 1119
BstC8I	GCNNGC	5 cut(s)	85, 197, 958, 1177, 1804
BstDEI	CTNAG	3 cut(s)	26, 273, 1040
BstDSI	CCRYGG	1 cut(s)	909
BstEII	GGTNACC	1 cut(s)	439
BstF5I	GGATG	4 cut(s)	146, 393, 675, 810
BstFNI	CGCG	4 cut(s)	558, 1330, 1762, 1806
BstHHI	GCGC	2 cut(s)	560, 1764
BstKTI	GATC	6 cut(s)	631, 670, 997, 1467, 1507, 1659
BstMAI	GTCTC	5 cut(s)	346, 755, 1000, 1608, 1677
BstMBI	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
BstMCI	CGRYCG	1 cut(s)	1640
BstNI	CCWGG	2 cut(s)	177, 1131
BstPAI	GACNNNNGTC	1 cut(s)	1620
BstPI	GGTNACC	1 cut(s)	439
BstSCI	CCNGG	5 cut(s)	175, 180, 190, 1129, 1455
BstSFI	CTRYAG	1 cut(s)	879
BstSLI	GKGCMC	2 cut(s)	799, 1200
BstUI	CGCG	4 cut(s)	558, 1330, 1762, 1806
BstV1I	GCAGC	6 cut(s)	139, 268, 753, 1365, 1414, 1541
BstV2I	GAAGAC	2 cut(s)	372, 1023
BstX2I	RGATCY	1 cut(s)	667
BstYI	RGATCY	1 cut(s)	667
BsuI	GTATCC	1 cut(s)	222
BsuRI	GGCC	6 cut(s)	180, 227, 1125, 1460, 1497, 1802
BtgI	CCRYGG	1 cut(s)	909
BtrI	CACGTC	3 cut(s)	395, 649, 1618
BtsCI	GGATG	4 cut(s)	146, 393, 675, 810
BtsI	GCAGTG	1 cut(s)	868
BtsIMutI	CAGTG	2 cut(s)	574, 868
BtuMI	TCGCGA	1 cut(s)	1330
Cac8I	GCNNGC	5 cut(s)	85, 197, 958, 1177, 1804
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	2 cut(s)	560, 1764
Cfr10I	RCCGGY	3 cut(s)	114, 227, 369
Cfr13I	GGNCC	3 cut(s)	188, 1124, 1801
CseI	GACGC	1 cut(s)	1168
Csp6I	GTAC	5 cut(s)	39, 399, 1112, 1222, 1811
CspAI	ACCGGT	1 cut(s)	114
CviAII	CATG	7 cut(s)	208, 468, 659, 910, 972, 1346, 1729
CviQI	GTAC	5 cut(s)	39, 399, 1112, 1222, 1811
DdeI	CTNAG	3 cut(s)	26, 273, 1040
DpnI	GATC	6 cut(s)	630, 669, 996, 1466, 1506, 1658
DpnII	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
EaeI	YGGCCR	1 cut(s)	225
Eam1104I	CTCTTC	4 cut(s)	519, 797, 841, 1584
EarI	CTCTTC	4 cut(s)	519, 797, 841, 1584
EciI	GGCGGA	1 cut(s)	89
Eco130I	CCWWGG	1 cut(s)	909
Eco31I	GGTCTC	1 cut(s)	1677
Eco32I	GATATC	1 cut(s)	1609
Eco47I	GGWCC	1 cut(s)	188
Eco57I	CTGAAG	2 cut(s)	642, 858
Eco72I	CACGTG	2 cut(s)	80, 92
Eco88I	CYCGRG	1 cut(s)	1104
Eco91I	GGTNACC	1 cut(s)	439
EcoO65I	GGTNACC	1 cut(s)	439
EcoRII	CCWGG	2 cut(s)	175, 1129
EcoRV	GATATC	1 cut(s)	1609
EcoT14I	CCWWGG	1 cut(s)	909
EcoT22I	ATGCAT	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	909
Esp3I	CGTCTC	1 cut(s)	1608
FaeI	CATG	7 cut(s)	211, 471, 662, 913, 975, 1349, 1732
FaqI	GGGAC	5 cut(s)	38, 174, 578, 1147, 1166
FatI	CATG	7 cut(s)	207, 467, 658, 909, 971, 1345, 1728
FauI	CCCGC	4 cut(s)	188, 1168, 1767, 1811
FauNDI	CATATG	1 cut(s)	1054
FbaI	TGATCA	3 cut(s)	628, 1464, 1504
Fnu4HI	GCNGC	7 cut(s)	128, 282, 742, 1379, 1382, 1428, 1530
FokI	GGATG	4 cut(s)	133, 400, 662, 797
Fsp4HI	GCNGC	7 cut(s)	128, 282, 742, 1379, 1382, 1428, 1530
FspBI	CTAG	3 cut(s)	788, 902, 1667
GlaI	GCGC	2 cut(s)	559, 1763
GluI	GCNGC	7 cut(s)	128, 282, 742, 1379, 1382, 1428, 1530
GsaI	CCCAGC	1 cut(s)	795
HaeIII	GGCC	6 cut(s)	180, 227, 1125, 1460, 1497, 1802
HapII	CCGG	8 cut(s)	115, 181, 192, 228, 370, 1457, 1599, 1709
HgaI	GACGC	1 cut(s)	1168
HhaI	GCGC	2 cut(s)	560, 1764
Hin1I	GRCGYC	2 cut(s)	96, 1179
Hin1II	CATG	7 cut(s)	211, 471, 662, 913, 975, 1349, 1732
Hin6I	GCGC	2 cut(s)	558, 1762
HinP1I	GCGC	2 cut(s)	558, 1762
HincII	GTYRAC	2 cut(s)	1312, 1625
HindII	GTYRAC	2 cut(s)	1312, 1625
HindIII	AAGCTT	1 cut(s)	474
HinfI	GANTC	7 cut(s)	748, 905, 938, 1091, 1313, 1478, 1732
HpaII	CCGG	8 cut(s)	115, 181, 192, 228, 370, 1457, 1599, 1709
HphI	GGTGA	2 cut(s)	638, 1241
Hpy166II	GTNNAC	4 cut(s)	41, 1312, 1625, 1748
Hpy188I	TCNGA	8 cut(s)	14, 29, 142, 151, 544, 1613, 1661, 1789
Hpy188III	TCNNGA	7 cut(s)	376, 752, 902, 1046, 1301, 1329, 1599
Hpy8I	GTNNAC	4 cut(s)	41, 1312, 1625, 1748
Hpy99I	CGWCG	3 cut(s)	18, 396, 1083
HpyAV	CCTTC	7 cut(s)	113, 474, 617, 851, 1115, 1596, 1792
HpyCH4III	ACNGT	5 cut(s)	45, 418, 445, 569, 1582
HpyCH4IV	ACGT	6 cut(s)	79, 91, 96, 394, 648, 1617
HpyF3I	CTNAG	3 cut(s)	26, 273, 1040
HpySE526I	ACGT	6 cut(s)	79, 91, 96, 394, 648, 1617
Hsp92I	GRCGYC	2 cut(s)	96, 1179
Hsp92II	CATG	7 cut(s)	211, 471, 662, 913, 975, 1349, 1732
HspAI	GCGC	2 cut(s)	558, 1762
Kpn2I	TCCGGA	1 cut(s)	1598
Ksp22I	TGATCA	3 cut(s)	628, 1464, 1504
Kzo9I	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
LguI	GCTCTTC	2 cut(s)	797, 841
LmnI	GCTCC	1 cut(s)	1760
Lsp1109I	GCAGC	6 cut(s)	139, 268, 753, 1365, 1414, 1541
LweI	GCATC	8 cut(s)	133, 155, 259, 298, 378, 754, 1555, 1655
MaeI	CTAG	3 cut(s)	788, 902, 1667
MaeII	ACGT	6 cut(s)	79, 91, 96, 394, 648, 1617
MaeIII	GTNAC	5 cut(s)	92, 320, 439, 1582, 1736
MalI	GATC	6 cut(s)	630, 669, 996, 1466, 1506, 1658
MbiI	CCGCTC	2 cut(s)	1636, 1755
MboI	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
MboII	GAAGA	9 cut(s)	377, 536, 625, 767, 814, 858, 1028, 1140, 1601
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	2 cut(s)	799, 1200
MlyI	GAGTC	4 cut(s)	757, 914, 1100, 1307
MmeI	TCCRAC	2 cut(s)	37, 1812
Mph1103I	ATGCAT	1 cut(s)	148
MroI	TCCGGA	1 cut(s)	1598
MroXI	GAANNNNTTC	1 cut(s)	806
MseI	TTAA	1 cut(s)	890
MslI	CAYNNNNRTG	1 cut(s)	141
MspA1I	CMGCKG	1 cut(s)	218
MspI	CCGG	8 cut(s)	115, 181, 192, 228, 370, 1457, 1599, 1709
MspR9I	CCNGG	5 cut(s)	177, 182, 192, 1131, 1457
MvaI	CCWGG	2 cut(s)	177, 1131
MvnI	CGCG	4 cut(s)	558, 1330, 1762, 1806
NciI	CCSGG	3 cut(s)	182, 192, 1457
NcoI	CCATGG	1 cut(s)	909
NdeI	CATATG	1 cut(s)	1054
NdeII	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
NlaIII	CATG	7 cut(s)	211, 471, 662, 913, 975, 1349, 1732
NlaIV	GGNNCC	1 cut(s)	190
NmuCI	GTSAC	2 cut(s)	92, 1736
NruI	TCGCGA	1 cut(s)	1330
NsiI	ATGCAT	1 cut(s)	148
NspV	TTCGAA	2 cut(s)	287, 1119
PaeR7I	CTCGAG	1 cut(s)	1104
PciSI	GCTCTTC	2 cut(s)	797, 841
PcsI	WCGNNNNNNNCGW	1 cut(s)	1075
PdmI	GAANNNNTTC	1 cut(s)	806
PfeI	GAWTC	3 cut(s)	938, 1478, 1732
PinAI	ACCGGT	1 cut(s)	114
PkrI	GCNGC	7 cut(s)	129, 283, 743, 1380, 1383, 1429, 1531
PleI	GAGTC	4 cut(s)	756, 913, 1099, 1307
PmaCI	CACGTG	2 cut(s)	80, 92
PmlI	CACGTG	2 cut(s)	80, 92
PpsI	GAGTC	4 cut(s)	756, 913, 1099, 1307
Ppu21I	YACGTR	2 cut(s)	80, 92
PshAI	GACNNNNGTC	1 cut(s)	1620
PshBI	ATTAAT	1 cut(s)	890
Psp6I	CCWGG	2 cut(s)	175, 1129
PspCI	CACGTG	2 cut(s)	80, 92
PspEI	GGTNACC	1 cut(s)	439
PspFI	CCCAGC	1 cut(s)	791
PspGI	CCWGG	2 cut(s)	175, 1129
PspN4I	GGNNCC	1 cut(s)	190
PspPI	GGNCC	3 cut(s)	188, 1124, 1801
PspXI	VCTCGAGB	1 cut(s)	1104
PsrI	GAACNNNNNNTAC	2 cut(s)	22, 54
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	1 cut(s)	667
PvuII	CAGCTG	1 cut(s)	218
RruI	TCGCGA	1 cut(s)	1330
RsaI	GTAC	5 cut(s)	40, 400, 1113, 1223, 1812
RsaNI	GTAC	5 cut(s)	39, 399, 1112, 1222, 1811
RseI	CAYNNNNRTG	1 cut(s)	141
SapI	GCTCTTC	2 cut(s)	797, 841
SaqAI	TTAA	1 cut(s)	890
SatI	GCNGC	7 cut(s)	128, 282, 742, 1379, 1382, 1428, 1530
Sau3AI	GATC	6 cut(s)	628, 667, 994, 1464, 1504, 1656
Sau96I	GGNCC	3 cut(s)	188, 1124, 1801
ScaI	AGTACT	1 cut(s)	1223
SchI	GAGTC	4 cut(s)	757, 914, 1100, 1307
ScrFI	CCNGG	5 cut(s)	177, 182, 192, 1131, 1457
SduI	GDGCHC	2 cut(s)	799, 1200
SfaNI	GCATC	8 cut(s)	133, 155, 259, 298, 378, 754, 1555, 1655
SfcI	CTRYAG	1 cut(s)	879
Sfr274I	CTCGAG	1 cut(s)	1104
SfuI	TTCGAA	2 cut(s)	287, 1119
SgrAI	CRCCGGYG	1 cut(s)	114
SinI	GGWCC	1 cut(s)	188
SlaI	CTCGAG	1 cut(s)	1104
SmiMI	CAYNNNNRTG	1 cut(s)	141
SmlI	CTYRAG	4 cut(s)	374, 745, 1104, 1202
SmoI	CTYRAG	4 cut(s)	374, 745, 1104, 1202
SpeI	ACTAGT	1 cut(s)	1666
SspI	AATATT	1 cut(s)	496
SspMI	CTAG	3 cut(s)	788, 902, 1667
StyD4I	CCNGG	5 cut(s)	175, 180, 190, 1129, 1455
StyI	CCWWGG	1 cut(s)	909
TaaI	ACNGT	5 cut(s)	45, 418, 445, 569, 1582
TaiI	ACGT	6 cut(s)	82, 94, 99, 397, 651, 1620
TaqI	TCGA	5 cut(s)	287, 753, 1105, 1119, 1815
TatI	WGTACW	3 cut(s)	1111, 1221, 1810
TauI	GCSGC	1 cut(s)	1384
TfiI	GAWTC	3 cut(s)	938, 1478, 1732
Tru1I	TTAA	1 cut(s)	890
Tru9I	TTAA	1 cut(s)	890
TscAI	CASTG	2 cut(s)	574, 868
TseFI	GTSAC	2 cut(s)	92, 1736
TseI	GCWGC	6 cut(s)	127, 281, 741, 1378, 1427, 1529
Tsp45I	GTSAC	2 cut(s)	92, 1736
TspDTI	ATGAA	9 cut(s)	456, 746, 799, 951, 960, 1287, 1362, 1584, 1745
TspGWI	ACGGA	4 cut(s)	677, 1372, 1682, 1695
TspRI	CASTG	2 cut(s)	574, 868
VpaK11BI	GGWCC	1 cut(s)	188
VspI	ATTAAT	1 cut(s)	890
XapI	RAATTY	4 cut(s)	153, 456, 725, 1777
XbaI	TCTAGA	1 cut(s)	901
XhoI	CTCGAG	1 cut(s)	1104
XmnI	GAANNNNTTC	1 cut(s)	806
XspI	CTAG	3 cut(s)	788, 902, 1667
ZraI	GACGTC	1 cut(s)	97
ZrmI	AGTACT	1 cut(s)	1223
Zsp2I	ATGCAT	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.