Rh5DG017400

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0003193
Physical Location & Seq
Forward (+)
1332147 .. 1337808
5662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG017400.1

Sequence Viewer

Length: 1830 bp
ATGACCATTTTCCGACGAATTATACTCCGAACAGCTCGGACCCGGCGGTCAGTCCCCGCCGTCCCCCAAACCCCAAACCCTCCTCCACGTGCTTGCTCACGTGACCTCCCAAATCCCCGCCTTCTCTGCCACCGGTGTTTTGAGCAACCATATCCTTCCAGTGCATATGAAATTGAGGTGGTGAAAGCTGTGCCAAGCCGGGGCGGTGCTGGCGGGCTGTATCGTATGTATCCGGCTGTTTTGGCTGGTTTGATTGGACTTGGAGGCTTGGAGGTAGCTTATGCAGATGCTGAGGAGGCTGCTTCCAAGCAGGGTTTGCCGGCTGATGCCCCTGTGAATAACCTGGAGGAAATTGCCAAGAAGCAGAGACAGGAAATTGAGGACTTGCTCAAGAGTAAAGGGATCCAACGTGGTTCTTATCCCAACTTTAGTGTTTCTGTCAAGGGGCAAAAGGTAGCCATCAAGTTCCAAATTCCTCCTGCATGTGAAGCTTCACAAGTGATTGCAAATATTGCTTCTAATCTTGGCTTGAAAGTTGAAGAGCATGGTGGTGGTTCAGATATATCATTACGCGCTTGGGACAGTGGAGTTGCTTGGCAACTCATGCTTATGCACCCAGAGAAACAGAAGGAAACTGAAGGTGATCAAGGGGAATTAAAAGATGTGAACGAACATGATCGAGATCTGCACATCCTCGTTTTCCGTTCAGTCATTATCTCAACAGAAAAAGCTGAAATTGAATTTATGAAGCAGGGCAGCTTGAGTCCCAAAGAGCTTGATGCTCTGGTATCTGCTTTACAATTAGCTGGGACAAAAAAGAGCTTGATCCACGAGAAAAAATCTACCACAGAACGAAGAGTGAAGGAAGATAGCGCACAAACTTCATCTATAGAGAAATTAATAACCAGTCTTGAGTCCATGGGAGTGAGAGTTTATGGAGTTGATGAACCCAATATGAGTTCTACAAGCAAAGATATTTCATGGGATAATCTTGCTGGATATGATCTGCAAAAGCGACAGATAGAAGACACGATACTACTGGCTTTGCTTAGTCCTGAAACATATGATGAAATTGCCCGTGGAACTCGTTGCAAATTTGAGTCAAACAGACCTCGAGCTGTACTCTTCGAAGGCCCACCAGGTACAGGGAAAACTTCTTCTGCTCGTGTCATTGCTAATCAAGCGGCCGTCCCGATGTTATATGTTCCCCTTGAGGTTATCTTGTCCAAGTACTATGGTGAGAGTGAACGATTATTAGGGAAGGTGTTTTCACTTGCTAATGAACTCCCAGATGGTGCTATTATTTTTCTAGATGAGGTTGATTCGTTTGCTATTTCGCGAGATAGTGATATGCATGAAGCCACACGGAGAGTTTTATCAGTTTTGCTGCGACAGATTGATGGATTTGAACAGGATAAGAAAGTGGTTGTAATTGCTGCAACAAATAGGAAGCAAGACCTTGACCCGGCCTTGATCAGTCGGTTCGATTCAATTATCCCATTTGGCCTACCTGATCATCAAAATCGTAAGGAAATAGCAGCTCAGTATGCAAAGCATCTAACCAAAACTGAATTAGATGAATTGGCAACAGTAACAGAAGAGATGTCTGGAAGGGATATCAGAGATGTGTGTCAACAAGCAGAGCGGTCGTGGGCGTCAAAGCTGATCCGAGGAAAAGTACCCAAAGACGGAGACCAAATCCATCTTCCACCTCTGCAGGACTACATAGCGAGTGCCATGAATCGACGCAAGGGTTTCCTCAGCTCCCCACCCCGACAAACCCAAAATTCCGCGTCTGACATAAAGAAGGCCAGGGTTGTACTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
AAA

Protein Analysis

609

Amino Acids

67.42

Weight (kDa)

6.83

Isoelectric Point (pI)

56.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 374 - 502 1.6e-35 ATPase family associated with various cellular activities (AAA)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
AccBSI CCGCTC 1 cut(s) 1645
AccII CGCG 3 cut(s) 573, 1339, 1793
AciI CCGC 8 cut(s) 46, 57, 118, 204, 213, 1184, 1645, 1791
AclWI GGATC 4 cut(s) 397, 410, 820, 1660
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 4 cut(s) 471, 740, 1094, 1786
AcuI CTGAAG 1 cut(s) 657
AcvI CACGTG 2 cut(s) 89, 101
AcyI GRCGYC 1 cut(s) 1655
AfaI GTAC 5 cut(s) 1122, 1144, 1232, 1680, 1821
AfiI CCNNNNNNNGG 4 cut(s) 200, 1145, 1465, 1688
AgeI ACCGGT 1 cut(s) 132
AgsI TTSAA 5 cut(s) 532, 539, 740, 1409, 1491
AjnI CCWGG 3 cut(s) 342, 1138, 1811
AjuI GAANNNNNNNTTGG 2 cut(s) 1689, 1721
Alw26I GTCTC 2 cut(s) 361, 1686
AlwI GGATC 4 cut(s) 397, 410, 820, 1660
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 1113
AoxI GGCC 5 cut(s) 1132, 1185, 1467, 1504, 1809
ApeKI GCWGC 5 cut(s) 299, 756, 1387, 1436, 1538
ApoI RAATTY 4 cut(s) 471, 740, 1094, 1786
AseI ATTAAT 1 cut(s) 899
AsiGI ACCGGT 1 cut(s) 132
AspLEI GCGC 2 cut(s) 575, 875
AspS9I GGNCC 2 cut(s) 39, 1133
AsuC2I CCSGG 3 cut(s) 43, 200, 1466
AsuHPI GGTGA 3 cut(s) 193, 653, 1250
AsuII TTCGAA 1 cut(s) 1128
AvaI CYCGRG 1 cut(s) 1113
AvaII GGWCC 1 cut(s) 39
BamHI GGATCC 1 cut(s) 402
BarI GAAGNNNNNNTAC 2 cut(s) 1017, 1049
BauI CACGAG 2 cut(s) 830, 1164
BbrPI CACGTG 2 cut(s) 89, 101
BbsI GAAGAC 1 cut(s) 1032
BbvCI CCTCAGC 2 cut(s) 291, 1760
BbvI GCAGC 5 cut(s) 286, 768, 1374, 1423, 1550
BccI CCATC 4 cut(s) 467, 1286, 1394, 1710
BceAI ACGGC 2 cut(s) 44, 1172
BcgI CGANNNNNNTGC 2 cut(s) 1629, 1663
BciT130I CCWGG 3 cut(s) 344, 1140, 1813
BciVI GTATCC 1 cut(s) 240
BclI TGATCA 3 cut(s) 643, 1473, 1513
BcnI CCSGG 3 cut(s) 43, 200, 1466
BcoDI GTCTC 2 cut(s) 361, 1686
BfaI CTAG 1 cut(s) 1310
BfmI CTRYAG 2 cut(s) 888, 1715
BfuI GTATCC 1 cut(s) 240
BglII AGATCT 1 cut(s) 682
BisI GCNGC 6 cut(s) 300, 757, 1185, 1388, 1437, 1539
BlsI GCNGC 6 cut(s) 301, 758, 1186, 1389, 1438, 1540
BmcAI AGTACT 1 cut(s) 1232
Bme1390I CCNGG 6 cut(s) 43, 200, 344, 1140, 1466, 1813
Bme18I GGWCC 1 cut(s) 39
BmeT110I CYCGRG 1 cut(s) 1113
BmgT120I GGNCC 2 cut(s) 39, 1133
BmiI GGNNCC 2 cut(s) 41, 404
BmrFI CCNGG 6 cut(s) 43, 200, 344, 1140, 1466, 1813
BmsI GCATC 4 cut(s) 277, 316, 769, 1564
BpiI GAAGAC 1 cut(s) 1032
BplI GAGNNNNNCTC 2 cut(s) 1107, 1139
BpmI CTGGAG 1 cut(s) 365
Bpu10I CCTNAGC 2 cut(s) 291, 1760
Bpu14I TTCGAA 1 cut(s) 1128
BpuEI CTTGAG 4 cut(s) 374, 781, 932, 1232
BpuMI CCSGG 3 cut(s) 43, 200, 1466
BsaAI YACGTR 2 cut(s) 89, 101
BsaBI GATNNNNATC 1 cut(s) 681
BsaHI GRCGYC 1 cut(s) 1655
BsaI GGTCTC 1 cut(s) 1686
BsaJI CCNNGG 5 cut(s) 199, 918, 1078, 1669, 1812
BsaWI WCCGGW 1 cut(s) 132
BsaXI ACNNNNNCTCC 4 cut(s) 90, 120, 915, 945
Bsc4I CCNNNNNNNGG 4 cut(s) 200, 1145, 1465, 1688
Bse118I RCCGGY 2 cut(s) 132, 319
Bse1I ACTGG 3 cut(s) 159, 906, 1044
Bse3DI GCAATG 1 cut(s) 1170
Bse8I GATNNNNATC 1 cut(s) 681
BseBI CCWGG 3 cut(s) 344, 1140, 1813
BseDI CCNNGG 5 cut(s) 199, 918, 1078, 1669, 1812
BseGI GGATG 1 cut(s) 690
BseJI GATNNNNATC 1 cut(s) 681
BseLI CCNNNNNNNGG 4 cut(s) 200, 1145, 1465, 1688
BseMI GCAATG 1 cut(s) 1170
BseMII CTCAG 3 cut(s) 282, 1556, 1774
BseNI ACTGG 3 cut(s) 159, 906, 1044
BseRI GAGGAG 2 cut(s) 72, 308
BseX3I CGGCCG 1 cut(s) 1185
BseXI GCAGC 5 cut(s) 286, 768, 1374, 1423, 1550
BseYI CCCAGC 1 cut(s) 806
BsgI GTGCAG 1 cut(s) 671
Bsh1236I CGCG 3 cut(s) 573, 1339, 1793
Bsh1285I CGRYCG 2 cut(s) 1188, 1649
BshFI GGCC 5 cut(s) 1134, 1187, 1469, 1506, 1811
BshTI ACCGGT 1 cut(s) 132
BsiEI CGRYCG 2 cut(s) 1188, 1649
BsiHKCI CYCGRG 1 cut(s) 1113
BsiSI CCGG 6 cut(s) 43, 133, 199, 233, 320, 1466
BslFI GGGAC 6 cut(s) 38, 47, 593, 750, 823, 1175
BslI CCNNNNNNNGG 4 cut(s) 200, 1145, 1465, 1688
BsmAI GTCTC 2 cut(s) 361, 1686
BsmFI GGGAC 6 cut(s) 38, 47, 593, 750, 823, 1175
BsnI GGCC 5 cut(s) 1134, 1187, 1469, 1506, 1811
Bso31I GGTCTC 1 cut(s) 1686
BsoBI CYCGRG 1 cut(s) 1113
Bsp119I TTCGAA 1 cut(s) 1128
Bsp143I GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
Bsp19I CCATGG 1 cut(s) 918
Bsp68I TCGCGA 1 cut(s) 1339
BspACI CCGC 8 cut(s) 46, 57, 118, 204, 213, 1184, 1645, 1791
BspANI GGCC 5 cut(s) 1134, 1187, 1469, 1506, 1811
BspCNI CTCAG 3 cut(s) 283, 1555, 1773
BspFNI CGCG 3 cut(s) 573, 1339, 1793
BspLI GGNNCC 2 cut(s) 41, 404
BspMAI CTGCAG 1 cut(s) 1719
BspPI GGATC 4 cut(s) 397, 410, 820, 1660
BspQI GCTCTTC 1 cut(s) 534
BspT104I TTCGAA 1 cut(s) 1128
BspTNI GGTCTC 1 cut(s) 1686
BsrBI CCGCTC 1 cut(s) 1645
BsrDI GCAATG 1 cut(s) 1170
BsrFI RCCGGY 2 cut(s) 132, 319
BsrI ACTGG 3 cut(s) 159, 906, 1044
BssAI RCCGGY 2 cut(s) 132, 319
BssECI CCNNGG 5 cut(s) 199, 918, 1078, 1669, 1812
BssMI GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
BssNI GRCGYC 1 cut(s) 1655
BssSI CACGAG 2 cut(s) 830, 1164
BssT1I CCWWGG 1 cut(s) 918
Bst2BI CACGAG 2 cut(s) 830, 1164
Bst2UI CCWGG 3 cut(s) 344, 1140, 1813
Bst4CI ACNGT 2 cut(s) 584, 1591
Bst6I CTCTTC 4 cut(s) 534, 850, 1130, 1593
BstACI GRCGYC 1 cut(s) 1655
BstAPI GCANNNNNTGC 3 cut(s) 316, 512, 604
BstBAI YACGTR 2 cut(s) 89, 101
BstBI TTCGAA 1 cut(s) 1128
BstC8I GCNNGC 4 cut(s) 94, 211, 215, 321
BstDEI CTNAG 4 cut(s) 291, 1049, 1542, 1760
BstDSI CCRYGG 2 cut(s) 918, 1078
BstF5I GGATG 1 cut(s) 690
BstFNI CGCG 3 cut(s) 573, 1339, 1793
BstHHI GCGC 2 cut(s) 575, 875
BstKTI GATC 9 cut(s) 405, 646, 679, 685, 828, 1006, 1476, 1516, 1668
BstMAI GTCTC 2 cut(s) 361, 1686
BstMBI GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
BstMCI CGRYCG 2 cut(s) 1188, 1649
BstNI CCWGG 3 cut(s) 344, 1140, 1813
BstNSI RCATGY 1 cut(s) 486
BstSCI CCNGG 6 cut(s) 41, 198, 342, 1138, 1464, 1811
BstSFI CTRYAG 2 cut(s) 888, 1715
BstUI CGCG 3 cut(s) 573, 1339, 1793
BstV1I GCAGC 5 cut(s) 286, 768, 1374, 1423, 1550
BstV2I GAAGAC 1 cut(s) 1032
BstX2I RGATCY 2 cut(s) 402, 682
BstYI RGATCY 2 cut(s) 402, 682
BstZI CGGCCG 1 cut(s) 1185
BsuI GTATCC 1 cut(s) 240
BsuRI GGCC 5 cut(s) 1134, 1187, 1469, 1506, 1811
BtgI CCRYGG 2 cut(s) 918, 1078
BtsCI GGATG 1 cut(s) 690
BtsIMutI CAGTG 2 cut(s) 166, 589
BtuMI TCGCGA 1 cut(s) 1339
Cac8I GCNNGC 4 cut(s) 94, 211, 215, 321
CaiI CAGNNNCTG 1 cut(s) 290
CfoI GCGC 2 cut(s) 575, 875
Cfr10I RCCGGY 2 cut(s) 132, 319
Cfr13I GGNCC 2 cut(s) 39, 1133
CseI GACGC 3 cut(s) 1644, 1755, 1782
CsiI ACCWGGT 1 cut(s) 1138
Csp6I GTAC 5 cut(s) 1121, 1143, 1231, 1679, 1820
CspAI ACCGGT 1 cut(s) 132
CviAII CATG 8 cut(s) 483, 545, 604, 674, 919, 981, 1355, 1738
CviQI GTAC 5 cut(s) 1121, 1143, 1231, 1679, 1820
DdeI CTNAG 4 cut(s) 291, 1049, 1542, 1760
DpnI GATC 9 cut(s) 404, 645, 678, 684, 827, 1005, 1475, 1515, 1667
DpnII GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 1185
EagI CGGCCG 1 cut(s) 1185
Eam1104I CTCTTC 4 cut(s) 534, 850, 1130, 1593
EarI CTCTTC 4 cut(s) 534, 850, 1130, 1593
EclXI CGGCCG 1 cut(s) 1185
Eco130I CCWWGG 1 cut(s) 918
Eco31I GGTCTC 1 cut(s) 1686
Eco32I GATATC 1 cut(s) 1618
Eco47I GGWCC 1 cut(s) 39
Eco52I CGGCCG 1 cut(s) 1185
Eco57I CTGAAG 1 cut(s) 657
Eco72I CACGTG 2 cut(s) 89, 101
Eco88I CYCGRG 1 cut(s) 1113
EcoRII CCWGG 3 cut(s) 342, 1138, 1811
EcoRV GATATC 1 cut(s) 1618
EcoT14I CCWWGG 1 cut(s) 918
EcoT22I ATGCAT 1 cut(s) 1356
ErhI CCWWGG 1 cut(s) 918
FaeI CATG 8 cut(s) 486, 548, 607, 677, 922, 984, 1358, 1741
FaqI GGGAC 6 cut(s) 38, 47, 593, 750, 823, 1175
FatI CATG 8 cut(s) 482, 544, 603, 673, 918, 980, 1354, 1737
FauI CCCGC 3 cut(s) 64, 125, 206
FauNDI CATATG 2 cut(s) 166, 1063
FbaI TGATCA 3 cut(s) 643, 1473, 1513
Fnu4HI GCNGC 6 cut(s) 300, 757, 1185, 1388, 1437, 1539
FokI GGATG 1 cut(s) 677
Fsp4HI GCNGC 6 cut(s) 300, 757, 1185, 1388, 1437, 1539
FspBI CTAG 1 cut(s) 1310
GlaI GCGC 2 cut(s) 574, 874
GluI GCNGC 6 cut(s) 300, 757, 1185, 1388, 1437, 1539
GsaI CCCAGC 1 cut(s) 810
GsuI CTGGAG 1 cut(s) 365
HaeIII GGCC 5 cut(s) 1134, 1187, 1469, 1506, 1811
HapII CCGG 6 cut(s) 43, 133, 199, 233, 320, 1466
HgaI GACGC 3 cut(s) 1644, 1755, 1782
HhaI GCGC 2 cut(s) 575, 875
Hin1I GRCGYC 1 cut(s) 1655
Hin1II CATG 8 cut(s) 486, 548, 607, 677, 922, 984, 1358, 1741
Hin6I GCGC 2 cut(s) 573, 873
HinP1I GCGC 2 cut(s) 573, 873
HincII GTYRAC 1 cut(s) 1634
HindII GTYRAC 1 cut(s) 1634
HindIII AAGCTT 1 cut(s) 489
HinfI GANTC 6 cut(s) 763, 914, 1100, 1322, 1487, 1741
HpaII CCGG 6 cut(s) 43, 133, 199, 233, 320, 1466
HphI GGTGA 3 cut(s) 193, 653, 1250
Hpy166II GTNNAC 3 cut(s) 667, 1247, 1634
Hpy188I TCNGA 7 cut(s) 14, 29, 39, 559, 1622, 1670, 1798
Hpy188III TCNNGA 8 cut(s) 391, 680, 911, 1055, 1192, 1310, 1338, 1608
Hpy8I GTNNAC 3 cut(s) 667, 1247, 1634
Hpy99I CGWCG 2 cut(s) 18, 1749
HpyAV CCTTC 9 cut(s) 131, 165, 622, 632, 856, 1124, 1255, 1605, 1801
HpyCH4III ACNGT 2 cut(s) 584, 1591
HpyCH4IV ACGT 3 cut(s) 88, 100, 409
HpyF3I CTNAG 4 cut(s) 291, 1049, 1542, 1760
HpySE526I ACGT 3 cut(s) 88, 100, 409
Hsp92I GRCGYC 1 cut(s) 1655
Hsp92II CATG 8 cut(s) 486, 548, 607, 677, 922, 984, 1358, 1741
HspAI GCGC 2 cut(s) 573, 873
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
Ksp22I TGATCA 3 cut(s) 643, 1473, 1513
Kzo9I GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
LguI GCTCTTC 1 cut(s) 534
LmnI GCTCC 1 cut(s) 1769
Lsp1109I GCAGC 5 cut(s) 286, 768, 1374, 1423, 1550
LweI GCATC 4 cut(s) 277, 316, 769, 1564
MabI ACCWGGT 1 cut(s) 1138
MaeI CTAG 1 cut(s) 1310
MaeII ACGT 3 cut(s) 88, 100, 409
MaeIII GTNAC 2 cut(s) 101, 1591
MalI GATC 9 cut(s) 404, 645, 678, 684, 827, 1005, 1475, 1515, 1667
MbiI CCGCTC 1 cut(s) 1645
MboI GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
MboII GAAGA 8 cut(s) 551, 867, 878, 1037, 1117, 1149, 1610, 1697
MflI RGATCY 2 cut(s) 402, 682
MlyI GAGTC 3 cut(s) 772, 923, 1109
MmeI TCCRAC 2 cut(s) 37, 430
Mph1103I ATGCAT 1 cut(s) 1356
MroNI GCCGGC 1 cut(s) 319
MseI TTAA 2 cut(s) 656, 899
MslI CAYNNNNRTG 3 cut(s) 549, 608, 923
MspI CCGG 6 cut(s) 43, 133, 199, 233, 320, 1466
MspR9I CCNGG 6 cut(s) 43, 200, 344, 1140, 1466, 1813
MvaI CCWGG 3 cut(s) 344, 1140, 1813
MvnI CGCG 3 cut(s) 573, 1339, 1793
NaeI GCCGGC 1 cut(s) 321
NciI CCSGG 3 cut(s) 43, 200, 1466
NcoI CCATGG 1 cut(s) 918
NdeI CATATG 2 cut(s) 166, 1063
NdeII GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
NgoMIV GCCGGC 1 cut(s) 319
NlaIII CATG 8 cut(s) 486, 548, 607, 677, 922, 984, 1358, 1741
NlaIV GGNNCC 2 cut(s) 41, 404
NmuCI GTSAC 1 cut(s) 101
NruI TCGCGA 1 cut(s) 1339
NsiI ATGCAT 1 cut(s) 1356
NspI RCATGY 1 cut(s) 486
NspV TTCGAA 1 cut(s) 1128
PaeR7I CTCGAG 1 cut(s) 1113
PciSI GCTCTTC 1 cut(s) 534
PdiI GCCGGC 1 cut(s) 321
PfeI GAWTC 3 cut(s) 1322, 1487, 1741
PinAI ACCGGT 1 cut(s) 132
PkrI GCNGC 6 cut(s) 301, 758, 1186, 1389, 1438, 1540
PleI GAGTC 3 cut(s) 771, 922, 1108
PmaCI CACGTG 2 cut(s) 89, 101
PmlI CACGTG 2 cut(s) 89, 101
PpsI GAGTC 3 cut(s) 771, 922, 1108
Ppu21I YACGTR 2 cut(s) 89, 101
PshBI ATTAAT 1 cut(s) 899
Psp6I CCWGG 3 cut(s) 342, 1138, 1811
PspCI CACGTG 2 cut(s) 89, 101
PspFI CCCAGC 1 cut(s) 806
PspGI CCWGG 3 cut(s) 342, 1138, 1811
PspN4I GGNNCC 2 cut(s) 41, 404
PspPI GGNCC 2 cut(s) 39, 1133
PspXI VCTCGAGB 1 cut(s) 1113
PstI CTGCAG 1 cut(s) 1719
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 2 cut(s) 402, 682
RruI TCGCGA 1 cut(s) 1339
RsaI GTAC 5 cut(s) 1122, 1144, 1232, 1680, 1821
RsaNI GTAC 5 cut(s) 1121, 1143, 1231, 1679, 1820
RseI CAYNNNNRTG 3 cut(s) 549, 608, 923
SapI GCTCTTC 1 cut(s) 534
SaqAI TTAA 2 cut(s) 656, 899
SatI GCNGC 6 cut(s) 300, 757, 1185, 1388, 1437, 1539
Sau3AI GATC 9 cut(s) 402, 643, 676, 682, 825, 1003, 1473, 1513, 1665
Sau96I GGNCC 2 cut(s) 39, 1133
ScaI AGTACT 1 cut(s) 1232
SchI GAGTC 3 cut(s) 772, 923, 1109
ScrFI CCNGG 6 cut(s) 43, 200, 344, 1140, 1466, 1813
SexAI ACCWGGT 1 cut(s) 1138
SfaNI GCATC 4 cut(s) 277, 316, 769, 1564
SfcI CTRYAG 2 cut(s) 888, 1715
Sfr274I CTCGAG 1 cut(s) 1113
SfuI TTCGAA 1 cut(s) 1128
SgrAI CRCCGGYG 1 cut(s) 132
SinI GGWCC 1 cut(s) 39
SlaI CTCGAG 1 cut(s) 1113
SmiMI CAYNNNNRTG 3 cut(s) 549, 608, 923
SmlI CTYRAG 5 cut(s) 389, 760, 911, 1113, 1211
SmoI CTYRAG 5 cut(s) 389, 760, 911, 1113, 1211
SsiI CCGC 8 cut(s) 46, 57, 118, 204, 213, 1184, 1645, 1791
SspI AATATT 1 cut(s) 511
SspMI CTAG 1 cut(s) 1310
StyD4I CCNGG 6 cut(s) 41, 198, 342, 1138, 1464, 1811
StyI CCWWGG 1 cut(s) 918
TaaI ACNGT 2 cut(s) 584, 1591
TaiI ACGT 3 cut(s) 91, 103, 412
TaqI TCGA 5 cut(s) 679, 1114, 1128, 1485, 1744
TatI WGTACW 3 cut(s) 1120, 1230, 1819
TauI GCSGC 1 cut(s) 1187
TfiI GAWTC 3 cut(s) 1322, 1487, 1741
Tru1I TTAA 2 cut(s) 656, 899
Tru9I TTAA 2 cut(s) 656, 899
TscAI CASTG 2 cut(s) 166, 589
TseFI GTSAC 1 cut(s) 101
TseI GCWGC 5 cut(s) 299, 756, 1387, 1436, 1538
Tsp45I GTSAC 1 cut(s) 101
TspGWI ACGGA 3 cut(s) 692, 1381, 1704
TspRI CASTG 2 cut(s) 166, 589
VpaK11BI GGWCC 1 cut(s) 39
VspI ATTAAT 1 cut(s) 899
XapI RAATTY 4 cut(s) 471, 740, 1094, 1786
XbaI TCTAGA 1 cut(s) 1309
XceI RCATGY 1 cut(s) 486
XhoI CTCGAG 1 cut(s) 1113
XspI CTAG 1 cut(s) 1310
ZrmI AGTACT 1 cut(s) 1232
Zsp2I ATGCAT 1 cut(s) 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.