Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003193

Physical Location & Seq

Genomic Coordinates Reverse (-)

3352669 .. 3358872

Gene Structure 6204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g05890.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGACTATTTTCCGACGCATTTTACTCCGATCAGCTCCGACACGGCGGCCACTTCCCGCCATCCCCCAAACCCTAAACCCTCCCCCACGTGCTTGCTCACGTGACGTCCCAAACCCCCGCCTTCTCTGCCACCGGTCTTTTGAGCATTACAATGCGTCTGAAATTGAGGTGGTGAAGTTTGTGCCAGGCCGGGGCGGTGCTGGCCGGCGGTGTCTTGTGTATCCGGCTGTTTTGGCTGGTTTGATTGGGCTTCGAGGTTTGGAGGTGGCTTATGCAGATGCTGAGGAGGGCGCTTCCAAGCAAGGTCTGCCGGCTGATGCCAATAATATGGAGGAAGCTGCCAAGAAGCAAAGACAGGAAATTGAAGACTTGCTCAAGCGTAAAGGGATTCGAGGTGGTTCTATTCCCAACTTTACTGTTTCTGTCAAGGGGCAGAAGGTAACAATCAAGTTCCAAATTCCTCCTACATGTGAAGCTTCACAATTGATTGCCAATATTGTTTCTAATCTTGGCTTAAAAGTTGAAGAGCATGGTGGTGGTTCAGATGTATCATTACGCGCTTGGGATAGTGGAGTTGCTTGGCAACTAATGCTTATGCACCCAGAGAAACAGAAGGAAACTGAAGGTGATCAAGGGGAATCAAAAGATGTGAATAAACATGATCGAGATCTGCACATCCTCATTTTCCGTTCAGTCATTACCTCAACAGAAAAAACTGAAATTGAATTTATGAAGCAGGGTGGCTTGAGTCCCAACGAGCTCAATGCCCTGGTATCCGCTTTACAATTAGCTGGGGAAAAAATAGGAAAGTCTACCACAGAACGAAGAGGGAGGGAAGATAGCACACAATCTTCATCCATAGAGAAATTAATAACCAGTCTTGAGTCCATGGGAGTGAGAGTTTATGGAGTTCATGAACCCAATGAGAGTTCTGCAAGCAAAGCTGTTTCATGGGATAATCTTGCTGGATATGATCTGCAAAAGCGACAGATAGAAGACACGATACTTTTGGCTTTGCTAAGTCCTGAAACATATGATGATATTGCCCGCGGAACTCGTCGCAAATTTGAGTCAAATAGACCTCGAGCTGTACTCTTCGAAGGCCCACCAGGTACAGGGAAAACTTCCTTTGCTCGTGTCATTGCTAATCAAGCGGGCATCCCATTGTTATACGTGCCCCTTGAGGTTATATTGTCCAAGTACTATGGTGAGAGTGAACGATTATTAGGGAAAGTGTTTTCACTTGCCAATCAGCTTCCAGATGGTGCTATCATTTTTCTGGACGAGGTTGATTCGTTTGCTATTTCACGAGACGGTGATTTGCATGAAGCCACACGAAGGGTGTTGTCAGTGTTGCTGCGACAGATTGATGGATTTGAACAGGATAAGAAAGTGGTTGTAATTGCTGCAACAAATAGGAAGCAAGACCTTGACCCAGCCTTGATCAGTCGATTTGACACTATTATTCCATTTGGCCTACCTGATCATCAAACTCTTAAGGAAATAGCTGCTCAGTACGCGAAACATCTAACTGAATCTGAATTAGATGAATTGGCAACTGTAACAGAAGAGATGTCTGGAAGGGATATCAGAGATGTGTGTCAACAAGCAGAGCGCTCATGGGCATCAAAAATGATCCGAGGACAAGTATCCAAAGATGGAGAACAAATCTGTCTTCCGCCTCTGCAGGAGTACATAGCGAGTGCCATGAATCGACGCAAAGGTTTACTCAGCTCCCCACCCCGGCAGACCCAAAATCCTCCCAAGGCTGACAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

AAA

Protein Analysis

593

Amino Acids

65.49

Weight (kDa)

7.16

Isoelectric Point (pI)

58.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	364 - 492	3.9e-36	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	364 - 485	1.5e-06	AAA domain (dynein-related subfamily)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04180 AT4G04180
fragaria_vesca	FvH4_3g01380 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890
malus_domestica	MD10G1327000.v1.1 MD10G1327200.v1.1
prunus_persica	Prupe.4G014800_v2.0.a1 Prupe.4G015000_v2.0.a1 Prupe.4G015000_v2.0.a1
pyrus_communis	pycom10g27670
rosa_chinensis	RchiOBHm_Chr5g0002011 RchiOBHm_Chr5g0002051
rosa_laevigata	RLG00000025404 RLG00000030988 RLG00000030992
rosa_multiflora	Rmu_sc0000378.1_g000019 Rmu_sc0012328.1_g000001 Rmu_sc0017901.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074350 Rroxscaffold_6G00424700
rosa_rugosa	Rorug04G0394300
rosa_samantha	Rh3DG064500 Rh5AG015500 Rh5AG015700 Rh5AG015800 Rh5BG019100 Rh5CG016800 Rh5CG017100 Rh5DG017400
rosa_wichuraiana	Rw5G001520 Rw5G001540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
AccI	GTMKAC	1 cut(s)	812
AccII	CGCG	3 cut(s)	558, 1050, 1520
AclWI	GGATC	1 cut(s)	1630
AcoI	YGGCCR	2 cut(s)	47, 202
AcsI	RAATTY	3 cut(s)	456, 725, 1064
AcuI	CTGAAG	1 cut(s)	642
AcvI	CACGTG	2 cut(s)	89, 101
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	5 cut(s)	1092, 1114, 1202, 1517, 1694
AfeI	AGCGCT	1 cut(s)	1616
AfiI	CCNNNNNNNGG	4 cut(s)	191, 1115, 1338, 1743
AflII	CTTAAG	1 cut(s)	1496
AflIII	ACRYGT	1 cut(s)	467
AgeI	ACCGGT	1 cut(s)	132
AgsI	TTSAA	4 cut(s)	365, 524, 725, 1379
AjnI	CCWGG	3 cut(s)	184, 768, 1108
Alw21I	GWGCWC	1 cut(s)	762
Alw26I	GTCTC	1 cut(s)	1305
AlwI	GGATC	1 cut(s)	1630
AlwNI	CAGNNNCTG	1 cut(s)	281
Ama87I	CYCGRG	1 cut(s)	1083
Aor51HI	AGCGCT	1 cut(s)	1616
AoxI	GGCC	5 cut(s)	47, 187, 202, 1102, 1474
ApeKI	GCWGC	4 cut(s)	338, 1357, 1406, 1508
ApoI	RAATTY	3 cut(s)	456, 725, 1064
AseI	ATTAAT	1 cut(s)	869
AsiGI	ACCGGT	1 cut(s)	132
AspLEI	GCGC	3 cut(s)	293, 560, 1617
AspS9I	GGNCC	1 cut(s)	1103
AsuC2I	CCSGG	2 cut(s)	191, 1744
AsuHPI	GGTGA	4 cut(s)	184, 638, 1220, 1328
AsuII	TTCGAA	1 cut(s)	1098
AvaI	CYCGRG	1 cut(s)	1083
BaeGI	GKGCMC	1 cut(s)	1179
BanII	GRGCYC	1 cut(s)	762
BarI	GAAGNNNNNNTAC	2 cut(s)	987, 1019
BauI	CACGAG	2 cut(s)	1134, 1308
BbrPI	CACGTG	2 cut(s)	89, 101
BbsI	GAAGAC	3 cut(s)	372, 1002, 1667
Bbv12I	GWGCWC	1 cut(s)	762
BbvCI	CCTCAGC	1 cut(s)	282
BbvI	GCAGC	4 cut(s)	325, 1344, 1393, 1495
BccI	CCATC	4 cut(s)	68, 1256, 1364, 1652
BceAI	ACGGC	1 cut(s)	59
BcgI	CGANNNNNNTGC	2 cut(s)	746, 780
BciT130I	CCWGG	3 cut(s)	186, 770, 1110
BciVI	GTATCC	3 cut(s)	231, 784, 1660
BclI	TGATCA	3 cut(s)	628, 1443, 1483
BcnI	CCSGG	2 cut(s)	191, 1744
BcoDI	GTCTC	1 cut(s)	1305
BfmI	CTRYAG	1 cut(s)	1685
BfoI	RGCGCY	2 cut(s)	294, 1618
BfrI	CTTAAG	1 cut(s)	1496
BfuI	GTATCC	3 cut(s)	231, 784, 1660
BglII	AGATCT	1 cut(s)	667
BisI	GCNGC	5 cut(s)	47, 339, 1358, 1407, 1509
BlsI	GCNGC	5 cut(s)	48, 340, 1359, 1408, 1510
BmcAI	AGTACT	1 cut(s)	1202
Bme1390I	CCNGG	5 cut(s)	186, 191, 770, 1110, 1744
BmeT110I	CYCGRG	1 cut(s)	1083
BmgT120I	GGNCC	1 cut(s)	1103
BmrFI	CCNGG	5 cut(s)	186, 191, 770, 1110, 1744
BmsI	GCATC	4 cut(s)	268, 307, 1167, 1634
BpiI	GAAGAC	3 cut(s)	372, 1002, 1667
BplI	GAGNNNNNCTC	2 cut(s)	1077, 1109
Bpu10I	CCTNAGC	1 cut(s)	282
Bpu14I	TTCGAA	1 cut(s)	1098
BpuEI	CTTGAG	4 cut(s)	359, 766, 902, 1202
BpuMI	CCSGG	2 cut(s)	191, 1744
BsaAI	YACGTR	3 cut(s)	89, 101, 1174
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	1 cut(s)	105
BsaJI	CCNNGG	7 cut(s)	190, 768, 888, 1048, 1639, 1742, 1764
BsaWI	WCCGGW	1 cut(s)	132
BsaXI	ACNNNNNCTCC	2 cut(s)	885, 915
Bsc4I	CCNNNNNNNGG	4 cut(s)	191, 1115, 1338, 1743
Bse118I	RCCGGY	3 cut(s)	132, 204, 310
Bse1I	ACTGG	1 cut(s)	876
Bse3DI	GCAATG	1 cut(s)	1140
Bse8I	GATNNNNATC	1 cut(s)	666
BseBI	CCWGG	3 cut(s)	186, 770, 1110
BseDI	CCNNGG	7 cut(s)	190, 768, 888, 1048, 1639, 1742, 1764
BseGI	GGATG	4 cut(s)	60, 675, 854, 1158
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	4 cut(s)	191, 1115, 1338, 1743
BseMI	GCAATG	1 cut(s)	1140
BseMII	CTCAG	3 cut(s)	273, 1526, 1744
BseNI	ACTGG	1 cut(s)	876
BseRI	GAGGAG	1 cut(s)	299
BseSI	GKGCMC	1 cut(s)	1179
BseXI	GCAGC	4 cut(s)	325, 1344, 1393, 1495
BseYI	CCCAGC	2 cut(s)	791, 1435
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	3 cut(s)	558, 1050, 1520
BshFI	GGCC	5 cut(s)	49, 189, 204, 1104, 1476
BshTI	ACCGGT	1 cut(s)	132
BsiHKAI	GWGCWC	1 cut(s)	762
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	6 cut(s)	133, 190, 205, 224, 311, 1744
BslFI	GGGAC	2 cut(s)	92, 735
BslI	CCNNNNNNNGG	4 cut(s)	191, 1115, 1338, 1743
BsmAI	GTCTC	1 cut(s)	1305
BsmBI	CGTCTC	1 cut(s)	1305
BsmFI	GGGAC	2 cut(s)	92, 735
BsnI	GGCC	5 cut(s)	49, 189, 204, 1104, 1476
BsoBI	CYCGRG	1 cut(s)	1083
Bsp119I	TTCGAA	1 cut(s)	1098
Bsp1286I	GDGCHC	2 cut(s)	762, 1179
Bsp143I	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
Bsp19I	CCATGG	1 cut(s)	888
BspANI	GGCC	5 cut(s)	49, 189, 204, 1104, 1476
BspCNI	CTCAG	3 cut(s)	274, 1525, 1743
BspFNI	CGCG	3 cut(s)	558, 1050, 1520
BspHI	TCATGA	1 cut(s)	913
BspMAI	CTGCAG	1 cut(s)	1689
BspPI	GGATC	1 cut(s)	1630
BspQI	GCTCTTC	1 cut(s)	519
BspT104I	TTCGAA	1 cut(s)	1098
BspTI	CTTAAG	1 cut(s)	1496
BsrDI	GCAATG	1 cut(s)	1140
BsrFI	RCCGGY	3 cut(s)	132, 204, 310
BsrI	ACTGG	1 cut(s)	876
BssAI	RCCGGY	3 cut(s)	132, 204, 310
BssECI	CCNNGG	7 cut(s)	190, 768, 888, 1048, 1639, 1742, 1764
BssMI	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	2 cut(s)	1134, 1308
BssT1I	CCWWGG	2 cut(s)	888, 1764
Bst2BI	CACGAG	2 cut(s)	1134, 1308
Bst2UI	CCWGG	3 cut(s)	186, 770, 1110
Bst4CI	ACNGT	3 cut(s)	418, 1316, 1561
Bst6I	CTCTTC	4 cut(s)	519, 820, 1100, 1563
BstACI	GRCGYC	1 cut(s)	105
BstAFI	CTTAAG	1 cut(s)	1496
BstAPI	GCANNNNNTGC	2 cut(s)	307, 589
BstBAI	YACGTR	3 cut(s)	89, 101, 1174
BstBI	TTCGAA	1 cut(s)	1098
BstC8I	GCNNGC	7 cut(s)	94, 202, 206, 312, 937, 1048, 1156
BstDEI	CTNAG	4 cut(s)	282, 1019, 1512, 1730
BstDSI	CCRYGG	2 cut(s)	888, 1048
BstF5I	GGATG	4 cut(s)	60, 675, 854, 1158
BstFNI	CGCG	3 cut(s)	558, 1050, 1520
BstH2I	RGCGCY	2 cut(s)	294, 1618
BstHHI	GCGC	3 cut(s)	293, 560, 1617
BstKTI	GATC	8 cut(s)	32, 631, 664, 670, 976, 1446, 1486, 1638
BstMAI	GTCTC	1 cut(s)	1305
BstMBI	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
BstMWI	GCNNNNNNNGC	8 cut(s)	126, 201, 233, 307, 589, 941, 1151, 1517
BstNI	CCWGG	3 cut(s)	186, 770, 1110
BstNSI	RCATGY	1 cut(s)	471
BstSCI	CCNGG	5 cut(s)	184, 189, 768, 1108, 1742
BstSFI	CTRYAG	1 cut(s)	1685
BstSLI	GKGCMC	1 cut(s)	1179
BstUI	CGCG	3 cut(s)	558, 1050, 1520
BstV1I	GCAGC	4 cut(s)	325, 1344, 1393, 1495
BstV2I	GAAGAC	3 cut(s)	372, 1002, 1667
BstX2I	RGATCY	1 cut(s)	667
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	1 cut(s)	667
BsuI	GTATCC	3 cut(s)	231, 784, 1660
BsuRI	GGCC	5 cut(s)	49, 189, 204, 1104, 1476
BtgI	CCRYGG	2 cut(s)	888, 1048
BtsCI	GGATG	4 cut(s)	60, 675, 854, 1158
BtsIMutI	CAGTG	1 cut(s)	1356
Cac8I	GCNNGC	7 cut(s)	94, 202, 206, 312, 937, 1048, 1156
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	3 cut(s)	293, 560, 1617
Cfr10I	RCCGGY	3 cut(s)	132, 204, 310
Cfr13I	GGNCC	1 cut(s)	1103
Cfr42I	CCGCGG	1 cut(s)	1051
CseI	GACGC	3 cut(s)	24, 144, 1725
CsiI	ACCWGGT	1 cut(s)	1108
Csp6I	GTAC	5 cut(s)	1091, 1113, 1201, 1516, 1693
CspAI	ACCGGT	1 cut(s)	132
CviAII	CATG	9 cut(s)	468, 530, 659, 889, 914, 951, 1325, 1620, 1708
CviQI	GTAC	5 cut(s)	1091, 1113, 1201, 1516, 1693
DdeI	CTNAG	4 cut(s)	282, 1019, 1512, 1730
DpnI	GATC	8 cut(s)	31, 630, 663, 669, 975, 1445, 1485, 1637
DpnII	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
EaeI	YGGCCR	2 cut(s)	47, 202
Eam1104I	CTCTTC	4 cut(s)	519, 820, 1100, 1563
EarI	CTCTTC	4 cut(s)	519, 820, 1100, 1563
EciI	GGCGGA	1 cut(s)	1668
Ecl136II	GAGCTC	1 cut(s)	760
Eco130I	CCWWGG	2 cut(s)	888, 1764
Eco24I	GRGCYC	1 cut(s)	762
Eco32I	GATATC	1 cut(s)	1588
Eco47III	AGCGCT	1 cut(s)	1616
Eco53kI	GAGCTC	1 cut(s)	760
Eco57I	CTGAAG	1 cut(s)	642
Eco72I	CACGTG	2 cut(s)	89, 101
Eco88I	CYCGRG	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	760
EcoRII	CCWGG	3 cut(s)	184, 768, 1108
EcoRV	GATATC	1 cut(s)	1588
EcoT14I	CCWWGG	2 cut(s)	888, 1764
EcoT38I	GRGCYC	1 cut(s)	762
ErhI	CCWWGG	2 cut(s)	888, 1764
Esp3I	CGTCTC	1 cut(s)	1305
FaeI	CATG	9 cut(s)	471, 533, 662, 892, 917, 954, 1328, 1623, 1711
FaqI	GGGAC	2 cut(s)	92, 735
FatI	CATG	9 cut(s)	467, 529, 658, 888, 913, 950, 1324, 1619, 1707
FauI	CCCGC	4 cut(s)	64, 125, 1055, 1147
FauNDI	CATATG	1 cut(s)	1033
FbaI	TGATCA	3 cut(s)	628, 1443, 1483
FblI	GTMKAC	1 cut(s)	812
Fnu4HI	GCNGC	5 cut(s)	47, 339, 1358, 1407, 1509
FokI	GGATG	4 cut(s)	47, 662, 841, 1145
FriOI	GRGCYC	1 cut(s)	762
Fsp4HI	GCNGC	5 cut(s)	47, 339, 1358, 1407, 1509
GlaI	GCGC	3 cut(s)	292, 559, 1616
GluI	GCNGC	5 cut(s)	47, 339, 1358, 1407, 1509
GsaI	CCCAGC	2 cut(s)	795, 1439
HaeII	RGCGCY	2 cut(s)	294, 1618
HaeIII	GGCC	5 cut(s)	49, 189, 204, 1104, 1476
HapII	CCGG	6 cut(s)	133, 190, 205, 224, 311, 1744
HgaI	GACGC	3 cut(s)	24, 144, 1725
HhaI	GCGC	3 cut(s)	293, 560, 1617
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	9 cut(s)	471, 533, 662, 892, 917, 954, 1328, 1623, 1711
Hin6I	GCGC	3 cut(s)	291, 558, 1615
HinP1I	GCGC	3 cut(s)	291, 558, 1615
HincII	GTYRAC	1 cut(s)	1604
HindII	GTYRAC	1 cut(s)	1604
HindIII	AAGCTT	1 cut(s)	474
HinfI	GANTC	8 cut(s)	388, 638, 748, 884, 1070, 1292, 1535, 1711
HpaII	CCGG	6 cut(s)	133, 190, 205, 224, 311, 1744
HphI	GGTGA	4 cut(s)	184, 638, 1220, 1328
Hpy166II	GTNNAC	4 cut(s)	813, 1217, 1604, 1727
Hpy188I	TCNGA	8 cut(s)	14, 29, 39, 160, 544, 1540, 1592, 1640
Hpy188III	TCNNGA	8 cut(s)	665, 881, 914, 1025, 1259, 1280, 1308, 1578
Hpy8I	GTNNAC	4 cut(s)	813, 1217, 1604, 1727
Hpy99I	CGWCG	3 cut(s)	18, 1062, 1719
HpyAV	CCTTC	7 cut(s)	131, 430, 607, 617, 1094, 1332, 1575
HpyCH4III	ACNGT	3 cut(s)	418, 1316, 1561
HpyCH4IV	ACGT	4 cut(s)	88, 100, 105, 1173
HpyCH4V	TGCA	8 cut(s)	275, 598, 673, 935, 979, 1324, 1409, 1687
HpyF10VI	GCNNNNNNNGC	8 cut(s)	126, 201, 233, 307, 589, 941, 1151, 1517
HpyF3I	CTNAG	4 cut(s)	282, 1019, 1512, 1730
HpySE526I	ACGT	4 cut(s)	88, 100, 105, 1173
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	9 cut(s)	471, 533, 662, 892, 917, 954, 1328, 1623, 1711
HspAI	GCGC	3 cut(s)	291, 558, 1615
KroI	GCCGGC	2 cut(s)	204, 310
KroNI	GCCGGC	2 cut(s)	206, 312
Ksp22I	TGATCA	3 cut(s)	628, 1443, 1483
KspI	CCGCGG	1 cut(s)	1051
Kzo9I	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
LguI	GCTCTTC	1 cut(s)	519
LmnI	GCTCC	2 cut(s)	40, 1739
Lsp1109I	GCAGC	4 cut(s)	325, 1344, 1393, 1495
LweI	GCATC	4 cut(s)	268, 307, 1167, 1634
MabI	ACCWGGT	1 cut(s)	1108
MaeII	ACGT	4 cut(s)	88, 100, 105, 1173
MaeIII	GTNAC	3 cut(s)	101, 439, 1561
MalI	GATC	8 cut(s)	31, 630, 663, 669, 975, 1445, 1485, 1637
MboI	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
MboII	GAAGA	9 cut(s)	377, 536, 837, 843, 848, 1007, 1087, 1580, 1667
MfeI	CAATTG	1 cut(s)	482
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	2 cut(s)	762, 1179
MlyI	GAGTC	3 cut(s)	757, 893, 1079
MmeI	TCCRAC	2 cut(s)	37, 62
MroNI	GCCGGC	2 cut(s)	204, 310
MseI	TTAA	3 cut(s)	515, 869, 1497
MslI	CAYNNNNRTG	3 cut(s)	150, 534, 893
MspA1I	CMGCKG	1 cut(s)	1050
MspCI	CTTAAG	1 cut(s)	1496
MspI	CCGG	6 cut(s)	133, 190, 205, 224, 311, 1744
MspR9I	CCNGG	5 cut(s)	186, 191, 770, 1110, 1744
MunI	CAATTG	1 cut(s)	482
MvaI	CCWGG	3 cut(s)	186, 770, 1110
MvnI	CGCG	3 cut(s)	558, 1050, 1520
MwoI	GCNNNNNNNGC	8 cut(s)	126, 201, 233, 307, 589, 941, 1151, 1517
NaeI	GCCGGC	2 cut(s)	206, 312
NciI	CCSGG	2 cut(s)	191, 1744
NcoI	CCATGG	1 cut(s)	888
NdeI	CATATG	1 cut(s)	1033
NdeII	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
NgoMIV	GCCGGC	2 cut(s)	204, 310
NlaIII	CATG	9 cut(s)	471, 533, 662, 892, 917, 954, 1328, 1623, 1711
NmuCI	GTSAC	1 cut(s)	101
NspI	RCATGY	1 cut(s)	471
NspV	TTCGAA	1 cut(s)	1098
PaeR7I	CTCGAG	1 cut(s)	1083
PagI	TCATGA	1 cut(s)	913
PciI	ACATGT	1 cut(s)	467
PciSI	GCTCTTC	1 cut(s)	519
PdiI	GCCGGC	2 cut(s)	206, 312
PfeI	GAWTC	5 cut(s)	388, 638, 1292, 1535, 1711
PinAI	ACCGGT	1 cut(s)	132
PkrI	GCNGC	5 cut(s)	48, 340, 1359, 1408, 1510
PleI	GAGTC	3 cut(s)	756, 892, 1078
PmaCI	CACGTG	2 cut(s)	89, 101
PmlI	CACGTG	2 cut(s)	89, 101
PpsI	GAGTC	3 cut(s)	756, 892, 1078
Ppu21I	YACGTR	3 cut(s)	89, 101, 1174
PscI	ACATGT	1 cut(s)	467
PshBI	ATTAAT	1 cut(s)	869
Psp124BI	GAGCTC	1 cut(s)	762
Psp6I	CCWGG	3 cut(s)	184, 768, 1108
PspCI	CACGTG	2 cut(s)	89, 101
PspFI	CCCAGC	2 cut(s)	791, 1435
PspGI	CCWGG	3 cut(s)	184, 768, 1108
PspPI	GGNCC	1 cut(s)	1103
PspXI	VCTCGAGB	1 cut(s)	1083
PstI	CTGCAG	1 cut(s)	1689
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	1 cut(s)	667
RsaI	GTAC	5 cut(s)	1092, 1114, 1202, 1517, 1694
RsaNI	GTAC	5 cut(s)	1091, 1113, 1201, 1516, 1693
RseI	CAYNNNNRTG	3 cut(s)	150, 534, 893
SacI	GAGCTC	1 cut(s)	762
SacII	CCGCGG	1 cut(s)	1051
SapI	GCTCTTC	1 cut(s)	519
SaqAI	TTAA	3 cut(s)	515, 869, 1497
SatI	GCNGC	5 cut(s)	47, 339, 1358, 1407, 1509
Sau3AI	GATC	8 cut(s)	29, 628, 661, 667, 973, 1443, 1483, 1635
Sau96I	GGNCC	1 cut(s)	1103
ScaI	AGTACT	1 cut(s)	1202
SchI	GAGTC	3 cut(s)	757, 893, 1079
ScrFI	CCNGG	5 cut(s)	186, 191, 770, 1110, 1744
SduI	GDGCHC	2 cut(s)	762, 1179
SexAI	ACCWGGT	1 cut(s)	1108
SfaNI	GCATC	4 cut(s)	268, 307, 1167, 1634
SfcI	CTRYAG	1 cut(s)	1685
Sfr274I	CTCGAG	1 cut(s)	1083
Sfr303I	CCGCGG	1 cut(s)	1051
SfuI	TTCGAA	1 cut(s)	1098
SgrBI	CCGCGG	1 cut(s)	1051
SlaI	CTCGAG	1 cut(s)	1083
SmiMI	CAYNNNNRTG	3 cut(s)	150, 534, 893
SmlI	CTYRAG	6 cut(s)	374, 745, 881, 1083, 1181, 1496
SmoI	CTYRAG	6 cut(s)	374, 745, 881, 1083, 1181, 1496
SspI	AATATT	1 cut(s)	496
SstI	GAGCTC	1 cut(s)	762
StyD4I	CCNGG	5 cut(s)	184, 189, 768, 1108, 1742
StyI	CCWWGG	2 cut(s)	888, 1764
TaaI	ACNGT	3 cut(s)	418, 1316, 1561
TaiI	ACGT	4 cut(s)	91, 103, 108, 1176
TaqI	TCGA	7 cut(s)	253, 391, 664, 1084, 1098, 1450, 1714
TatI	WGTACW	3 cut(s)	1090, 1200, 1692
TauI	GCSGC	1 cut(s)	49
TfiI	GAWTC	5 cut(s)	388, 638, 1292, 1535, 1711
Tru1I	TTAA	3 cut(s)	515, 869, 1497
Tru9I	TTAA	3 cut(s)	515, 869, 1497
TscAI	CASTG	1 cut(s)	1356
TseFI	GTSAC	1 cut(s)	101
TseI	GCWGC	4 cut(s)	338, 1357, 1406, 1508
Tsp45I	GTSAC	1 cut(s)	101
TspDTI	ATGAA	8 cut(s)	746, 843, 902, 930, 939, 1341, 1563, 1724
TspGWI	ACGGA	1 cut(s)	677
TspRI	CASTG	1 cut(s)	1356
Vha464I	CTTAAG	1 cut(s)	1496
VspI	ATTAAT	1 cut(s)	869
XapI	RAATTY	3 cut(s)	456, 725, 1064
XceI	RCATGY	1 cut(s)	471
XhoI	CTCGAG	1 cut(s)	1083
XmiI	GTMKAC	1 cut(s)	812
ZraI	GACGTC	1 cut(s)	106
ZrmI	AGTACT	1 cut(s)	1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.