Rw5G001540

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0003193
Physical Location & Seq
Forward (+)
1298751 .. 1303824
5074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G001540.1

Sequence Viewer

Length: 1560 bp
ATGACCATTTTCCGACGAATTATACTCCGAACAGCTCGGACCCGGCGGTCGATCCCCCAAACCCTCCTCCACGTGCTTGCTCACCCGGGGCGGTATCGTATGTATCCGGCTGTTTTGGCTGGTTTGATTGGACTTGGAGGTCTGGAGGTGGCTTATGCAGATGCTGAGGAGAGTAAAGGGATCCAGCATGGTTCTTATCCCAACTTCAGTGTTTCTGTCAAGGGGCAAAAGTTAGCCATCAAGTTCCAAATTCCTCCTGCATGTGAAGCTTCACAAGTGATTGCAAATATTGCTTCTGATCTTGGCTTGAAAGTTGAAGCGCATGGTGGTGGTTCAGATATATCATTACGCGCTTGGGACAGGTACTTTGATCAAGGGGAATTAAAAGATGTGAATGAACATGATCGAGATCTGCACATCCTCGTTTTCCGTTCAGTCACTACCTCAACAGAAAAAGCTGAAATTGAATTTATGAAGCAGGGCAGCTTGAGTCCTGAAGAGCTTGATGCTCTAGTATCTGCTTTACAATTAGCTGGGACAAAAAAGAGCTTAATCCACAAGAAAAAATCTACTGCAGAGCGAAGAGTGAGGGAAGATAGCGCGCAGACTTCATCTATAGAGAAATTAATAACCAGTCTTGAGTCCATGGGAGTGAGAGTTTATGGAGTTGATGAACCCAATATGAGTTCTACAAGCAAAGATATTTCATGGGATAATCTTGCTGGATATGATCTGCAAAAGCAACAGATAGAAGACACGATACTACTGGCTTTGCTTAGTCCTGAAACATATGATGAAATTGCCCATGGAACTCGTCGCAAATTTGAGTCAAACAAACCTCAAGCTGTACTCTTCGAAGGCCCACCAGGTACAGGGAAAACTTCTTCTGCTCGTGTCATTGCTAATCAAGCGGCCGTCCCAATGTTATATGTACCCCTTGAGGTTATCTTGTCCAAGTACTATGGTGAGAGTGAACGATTATTAGGGAAGGTGTTTTCACTTGCTAATGAACTCCCAGATGGTGCTATCATTTTTCTAGATGAGGTTGATTCTTTCGCTATTTTGCGAGATAGTGATTTGCATGAAGCCACACGGAGAGTTTTGTCAGTTTTGCTGCGACAGATTGATGGATTTGAACAGGATAAGAAAGTGGTTGTAATTGCTGCAACAAATAGGAAGCAAGACCTCGACCCGGCCTTGATCAGGTATATTGTCAATTCAATTATCCCATTTGGCCTACCTGATCATCAAAATCGTAAGGAAATAGCAGCTCAGTATGCAAAGCATCTAACCGAAACTGAATTAGATGAATTGGCAACAGTAACAGAAGAGATGTCTGGAAGGGATATCAGAGATGTGTGTCAACAAGCAGAGAGGTCGTGGGCATCAAAGCTGATGCGAGGAAAAGTACCCAAAGACGGGGACCAAACCAGTCTTCCGCCTCTGCAGGACTACATAGCGAGTGCCATGAATCGACACAAGGGATTCCTCAGCTCCCCACCCCGACAAACCCAAAATTCCGCGTCTGACACAAAGAAGGCCAGGGTTGTACTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
AAA

Protein Analysis

519

Amino Acids

57.59

Weight (kDa)

6.35

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 283 - 409 1.2e-31 ATPase family associated with various cellular activities (AAA)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 46, 138
AccII CGCG 3 cut(s) 351, 602, 1523
AciI CCGC 5 cut(s) 46, 91, 911, 1439, 1521
AclWI GGATC 3 cut(s) 46, 175, 188
AcoI YGGCCR 1 cut(s) 912
AcsI RAATTY 4 cut(s) 249, 467, 821, 1516
AcuI CTGAAG 2 cut(s) 190, 516
AcvI CACGTG 1 cut(s) 73
AfaI GTAC 7 cut(s) 365, 849, 871, 933, 959, 1410, 1551
AfiI CCNNNNNNNGG 5 cut(s) 872, 1192, 1203, 1418, 1419
AgsI TTSAA 5 cut(s) 310, 317, 467, 1136, 1221
AjnI CCWGG 2 cut(s) 865, 1541
AjuI GAANNNNNNNTTGG 2 cut(s) 1419, 1451
AlwI GGATC 3 cut(s) 46, 175, 188
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 1 cut(s) 85
AoxI GGCC 5 cut(s) 859, 912, 1194, 1234, 1539
ApeKI GCWGC 4 cut(s) 483, 1114, 1163, 1268
ApoI RAATTY 4 cut(s) 249, 467, 821, 1516
ArsI GACNNNNNNTTYG 2 cut(s) 350, 382
AseI ATTAAT 1 cut(s) 626
AspLEI GCGC 4 cut(s) 322, 353, 602, 604
AspS9I GGNCC 3 cut(s) 39, 860, 1423
AsuC2I CCSGG 4 cut(s) 43, 86, 87, 1193
AsuHPI GGTGA 2 cut(s) 74, 977
AsuII TTCGAA 1 cut(s) 855
AvaI CYCGRG 1 cut(s) 85
AvaII GGWCC 2 cut(s) 39, 1423
BamHI GGATCC 1 cut(s) 180
BarI GAAGNNNNNNTAC 2 cut(s) 744, 776
BauI CACGAG 1 cut(s) 891
BbrPI CACGTG 1 cut(s) 73
BbsI GAAGAC 2 cut(s) 759, 1427
BbvCI CCTCAGC 2 cut(s) 165, 1490
BbvI GCAGC 4 cut(s) 495, 1101, 1150, 1280
BccI CCATC 3 cut(s) 245, 1013, 1121
BceAI ACGGC 1 cut(s) 899
BcgI CGANNNNNNTGC 2 cut(s) 1359, 1393
BciT130I CCWGG 2 cut(s) 867, 1543
BciVI GTATCC 1 cut(s) 114
BclI TGATCA 3 cut(s) 370, 1200, 1243
BcnI CCSGG 4 cut(s) 43, 86, 87, 1193
BfaI CTAG 2 cut(s) 512, 1037
BfmI CTRYAG 3 cut(s) 573, 615, 1445
BfuI GTATCC 1 cut(s) 114
BglII AGATCT 1 cut(s) 409
BisI GCNGC 5 cut(s) 484, 912, 1115, 1164, 1269
BlsI GCNGC 5 cut(s) 485, 913, 1116, 1165, 1270
BmcAI AGTACT 1 cut(s) 959
Bme1390I CCNGG 6 cut(s) 43, 86, 87, 867, 1193, 1543
Bme18I GGWCC 2 cut(s) 39, 1423
BmeT110I CYCGRG 1 cut(s) 85
BmgT120I GGNCC 3 cut(s) 39, 860, 1423
BmiI GGNNCC 3 cut(s) 41, 182, 1424
BmrFI CCNGG 6 cut(s) 43, 86, 87, 867, 1193, 1543
BmsI GCATC 5 cut(s) 151, 496, 1294, 1386, 1394
BpiI GAAGAC 2 cut(s) 759, 1427
BpmI CTGGAG 1 cut(s) 164
Bpu10I CCTNAGC 2 cut(s) 165, 1490
Bpu14I TTCGAA 1 cut(s) 855
BpuEI CTTGAG 4 cut(s) 508, 659, 825, 959
BpuMI CCSGG 4 cut(s) 43, 86, 87, 1193
BsaAI YACGTR 1 cut(s) 73
BsaBI GATNNNNATC 1 cut(s) 408
BsaJI CCNNGG 5 cut(s) 85, 86, 645, 805, 1542
BsaXI ACNNNNNCTCC 2 cut(s) 642, 672
Bsc4I CCNNNNNNNGG 5 cut(s) 872, 1192, 1203, 1418, 1419
Bse1I ACTGG 3 cut(s) 633, 771, 1431
Bse3DI GCAATG 1 cut(s) 897
Bse8I GATNNNNATC 1 cut(s) 408
BseBI CCWGG 2 cut(s) 867, 1543
BseDI CCNNGG 5 cut(s) 85, 86, 645, 805, 1542
BseGI GGATG 1 cut(s) 417
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 5 cut(s) 872, 1192, 1203, 1418, 1419
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 3 cut(s) 156, 1286, 1504
BseNI ACTGG 3 cut(s) 633, 771, 1431
BsePI GCGCGC 1 cut(s) 600
BseRI GAGGAG 2 cut(s) 56, 182
BseX3I CGGCCG 1 cut(s) 912
BseXI GCAGC 4 cut(s) 495, 1101, 1150, 1280
BseYI CCCAGC 1 cut(s) 533
BsgI GTGCAG 1 cut(s) 398
Bsh1236I CGCG 3 cut(s) 351, 602, 1523
Bsh1285I CGRYCG 2 cut(s) 50, 915
BshFI GGCC 5 cut(s) 861, 914, 1196, 1236, 1541
BsiEI CGRYCG 2 cut(s) 50, 915
BsiHKCI CYCGRG 1 cut(s) 85
BsiSI CCGG 4 cut(s) 43, 86, 107, 1193
BslFI GGGAC 4 cut(s) 371, 550, 902, 1436
BslI CCNNNNNNNGG 5 cut(s) 872, 1192, 1203, 1418, 1419
BsmFI GGGAC 4 cut(s) 371, 550, 902, 1436
BsnI GGCC 5 cut(s) 861, 914, 1196, 1236, 1541
BsoBI CYCGRG 1 cut(s) 85
Bsp119I TTCGAA 1 cut(s) 855
Bsp143I GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
Bsp19I CCATGG 2 cut(s) 645, 805
BspACI CCGC 5 cut(s) 46, 91, 911, 1439, 1521
BspANI GGCC 5 cut(s) 861, 914, 1196, 1236, 1541
BspCNI CTCAG 3 cut(s) 157, 1285, 1503
BspFNI CGCG 3 cut(s) 351, 602, 1523
BspLI GGNNCC 3 cut(s) 41, 182, 1424
BspMAI CTGCAG 2 cut(s) 577, 1449
BspPI GGATC 3 cut(s) 46, 175, 188
BspQI GCTCTTC 1 cut(s) 492
BspT104I TTCGAA 1 cut(s) 855
BsrDI GCAATG 1 cut(s) 897
BsrI ACTGG 3 cut(s) 633, 771, 1431
BssECI CCNNGG 5 cut(s) 85, 86, 645, 805, 1542
BssHII GCGCGC 1 cut(s) 600
BssMI GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 2 cut(s) 645, 805
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 2 cut(s) 867, 1543
Bst4CI ACNGT 1 cut(s) 1321
Bst6I CTCTTC 4 cut(s) 492, 577, 857, 1323
BstAPI GCANNNNNTGC 1 cut(s) 290
BstBAI YACGTR 1 cut(s) 73
BstBI TTCGAA 1 cut(s) 855
BstC8I GCNNGC 2 cut(s) 78, 602
BstDEI CTNAG 4 cut(s) 165, 776, 1272, 1490
BstDSI CCRYGG 2 cut(s) 645, 805
BstENI CCTNNNNNAGG 1 cut(s) 1201
BstF5I GGATG 1 cut(s) 417
BstFNI CGCG 3 cut(s) 351, 602, 1523
BstHHI GCGC 4 cut(s) 322, 353, 602, 604
BstKTI GATC 9 cut(s) 54, 183, 301, 373, 406, 412, 733, 1203, 1246
BstMBI GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
BstMCI CGRYCG 2 cut(s) 50, 915
BstMWI GCNNNNNNNGC 5 cut(s) 116, 266, 290, 908, 1277
BstNI CCWGG 2 cut(s) 867, 1543
BstNSI RCATGY 1 cut(s) 264
BstSCI CCNGG 6 cut(s) 41, 84, 85, 865, 1191, 1541
BstSFI CTRYAG 3 cut(s) 573, 615, 1445
BstUI CGCG 3 cut(s) 351, 602, 1523
BstV1I GCAGC 4 cut(s) 495, 1101, 1150, 1280
BstV2I GAAGAC 2 cut(s) 759, 1427
BstX2I RGATCY 2 cut(s) 180, 409
BstYI RGATCY 2 cut(s) 180, 409
BstZI CGGCCG 1 cut(s) 912
BsuI GTATCC 1 cut(s) 114
BsuRI GGCC 5 cut(s) 861, 914, 1196, 1236, 1541
BtgI CCRYGG 2 cut(s) 645, 805
BtsCI GGATG 1 cut(s) 417
BtsIMutI CAGTG 1 cut(s) 214
Cac8I GCNNGC 2 cut(s) 78, 602
CaiI CAGNNNCTG 1 cut(s) 164
CfoI GCGC 4 cut(s) 322, 353, 602, 604
Cfr13I GGNCC 3 cut(s) 39, 860, 1423
Cfr9I CCCGGG 1 cut(s) 85
CseI GACGC 1 cut(s) 1512
CsiI ACCWGGT 1 cut(s) 865
Csp6I GTAC 7 cut(s) 364, 848, 870, 932, 958, 1409, 1550
CviAII CATG 9 cut(s) 188, 261, 323, 401, 646, 708, 806, 1082, 1468
CviQI GTAC 7 cut(s) 364, 848, 870, 932, 958, 1409, 1550
DdeI CTNAG 4 cut(s) 165, 776, 1272, 1490
DpnI GATC 9 cut(s) 53, 182, 300, 372, 405, 411, 732, 1202, 1245
DpnII GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
DrdI GACNNNNNNGTC 2 cut(s) 46, 138
DseDI GACNNNNNNGTC 2 cut(s) 46, 138
EaeI YGGCCR 1 cut(s) 912
EagI CGGCCG 1 cut(s) 912
Eam1104I CTCTTC 4 cut(s) 492, 577, 857, 1323
EarI CTCTTC 4 cut(s) 492, 577, 857, 1323
EciI GGCGGA 1 cut(s) 1428
EclXI CGGCCG 1 cut(s) 912
Eco130I CCWWGG 2 cut(s) 645, 805
Eco32I GATATC 1 cut(s) 1348
Eco47I GGWCC 2 cut(s) 39, 1423
Eco52I CGGCCG 1 cut(s) 912
Eco57I CTGAAG 2 cut(s) 190, 516
Eco72I CACGTG 1 cut(s) 73
Eco88I CYCGRG 1 cut(s) 85
EcoNI CCTNNNNNAGG 1 cut(s) 1201
EcoRII CCWGG 2 cut(s) 865, 1541
EcoRV GATATC 1 cut(s) 1348
EcoT14I CCWWGG 2 cut(s) 645, 805
ErhI CCWWGG 2 cut(s) 645, 805
FaeI CATG 9 cut(s) 191, 264, 326, 404, 649, 711, 809, 1085, 1471
FaqI GGGAC 4 cut(s) 371, 550, 902, 1436
FatI CATG 9 cut(s) 187, 260, 322, 400, 645, 707, 805, 1081, 1467
FauNDI CATATG 1 cut(s) 790
FbaI TGATCA 3 cut(s) 370, 1200, 1243
Fnu4HI GCNGC 5 cut(s) 484, 912, 1115, 1164, 1269
FokI GGATG 1 cut(s) 404
Fsp4HI GCNGC 5 cut(s) 484, 912, 1115, 1164, 1269
FspBI CTAG 2 cut(s) 512, 1037
GlaI GCGC 4 cut(s) 321, 352, 601, 603
GluI GCNGC 5 cut(s) 484, 912, 1115, 1164, 1269
GsaI CCCAGC 1 cut(s) 537
GsuI CTGGAG 1 cut(s) 164
HaeIII GGCC 5 cut(s) 861, 914, 1196, 1236, 1541
HapII CCGG 4 cut(s) 43, 86, 107, 1193
HgaI GACGC 1 cut(s) 1512
HhaI GCGC 4 cut(s) 322, 353, 602, 604
Hin1II CATG 9 cut(s) 191, 264, 326, 404, 649, 711, 809, 1085, 1471
Hin6I GCGC 4 cut(s) 320, 351, 600, 602
HinP1I GCGC 4 cut(s) 320, 351, 600, 602
HincII GTYRAC 1 cut(s) 1364
HindII GTYRAC 1 cut(s) 1364
HindIII AAGCTT 1 cut(s) 267
HinfI GANTC 6 cut(s) 490, 641, 827, 1049, 1471, 1485
HpaII CCGG 4 cut(s) 43, 86, 107, 1193
HphI GGTGA 2 cut(s) 74, 977
Hpy166II GTNNAC 2 cut(s) 974, 1364
Hpy188I TCNGA 7 cut(s) 14, 29, 39, 298, 337, 1352, 1528
Hpy188III TCNNGA 7 cut(s) 143, 407, 494, 638, 782, 1037, 1338
Hpy8I GTNNAC 2 cut(s) 974, 1364
Hpy99I CGWCG 2 cut(s) 18, 819
HpyAV CCTTC 4 cut(s) 851, 982, 1335, 1531
HpyCH4III ACNGT 1 cut(s) 1321
HpyCH4IV ACGT 1 cut(s) 72
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 266, 290, 908, 1277
HpyF3I CTNAG 4 cut(s) 165, 776, 1272, 1490
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 9 cut(s) 191, 264, 326, 404, 649, 711, 809, 1085, 1471
HspAI GCGC 4 cut(s) 320, 351, 600, 602
Ksp22I TGATCA 3 cut(s) 370, 1200, 1243
Kzo9I GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 1 cut(s) 1499
Lsp1109I GCAGC 4 cut(s) 495, 1101, 1150, 1280
LweI GCATC 5 cut(s) 151, 496, 1294, 1386, 1394
MabI ACCWGGT 1 cut(s) 865
MaeI CTAG 2 cut(s) 512, 1037
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 2 cut(s) 436, 1321
MalI GATC 9 cut(s) 53, 182, 300, 372, 405, 411, 732, 1202, 1245
MboI GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
MboII GAAGA 8 cut(s) 509, 594, 605, 764, 844, 876, 1340, 1427
MflI RGATCY 2 cut(s) 180, 409
MlyI GAGTC 3 cut(s) 499, 650, 836
MmeI TCCRAC 1 cut(s) 37
MseI TTAA 3 cut(s) 383, 551, 626
MslI CAYNNNNRTG 2 cut(s) 327, 650
MspI CCGG 4 cut(s) 43, 86, 107, 1193
MspR9I CCNGG 6 cut(s) 43, 86, 87, 867, 1193, 1543
MvaI CCWGG 2 cut(s) 867, 1543
MvnI CGCG 3 cut(s) 351, 602, 1523
MwoI GCNNNNNNNGC 5 cut(s) 116, 266, 290, 908, 1277
NciI CCSGG 4 cut(s) 43, 86, 87, 1193
NcoI CCATGG 2 cut(s) 645, 805
NdeI CATATG 1 cut(s) 790
NdeII GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
NlaIII CATG 9 cut(s) 191, 264, 326, 404, 649, 711, 809, 1085, 1471
NlaIV GGNNCC 3 cut(s) 41, 182, 1424
NmuCI GTSAC 1 cut(s) 436
NspI RCATGY 1 cut(s) 264
NspV TTCGAA 1 cut(s) 855
PauI GCGCGC 1 cut(s) 600
PciSI GCTCTTC 1 cut(s) 492
PfeI GAWTC 3 cut(s) 1049, 1471, 1485
PkrI GCNGC 5 cut(s) 485, 913, 1116, 1165, 1270
PleI GAGTC 3 cut(s) 498, 649, 835
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 3 cut(s) 498, 649, 835
Ppu21I YACGTR 1 cut(s) 73
PshBI ATTAAT 1 cut(s) 626
Psp6I CCWGG 2 cut(s) 865, 1541
PspCI CACGTG 1 cut(s) 73
PspFI CCCAGC 1 cut(s) 533
PspGI CCWGG 2 cut(s) 865, 1541
PspN4I GGNNCC 3 cut(s) 41, 182, 1424
PspPI GGNCC 3 cut(s) 39, 860, 1423
PstI CTGCAG 2 cut(s) 577, 1449
PstNI CAGNNNCTG 1 cut(s) 164
PsuI RGATCY 2 cut(s) 180, 409
PteI GCGCGC 1 cut(s) 600
RsaI GTAC 7 cut(s) 365, 849, 871, 933, 959, 1410, 1551
RsaNI GTAC 7 cut(s) 364, 848, 870, 932, 958, 1409, 1550
RseI CAYNNNNRTG 2 cut(s) 327, 650
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 3 cut(s) 383, 551, 626
SatI GCNGC 5 cut(s) 484, 912, 1115, 1164, 1269
Sau3AI GATC 9 cut(s) 51, 180, 298, 370, 403, 409, 730, 1200, 1243
Sau96I GGNCC 3 cut(s) 39, 860, 1423
ScaI AGTACT 1 cut(s) 959
SchI GAGTC 3 cut(s) 499, 650, 836
ScrFI CCNGG 6 cut(s) 43, 86, 87, 867, 1193, 1543
SexAI ACCWGGT 1 cut(s) 865
SfaNI GCATC 5 cut(s) 151, 496, 1294, 1386, 1394
SfcI CTRYAG 3 cut(s) 573, 615, 1445
SfuI TTCGAA 1 cut(s) 855
SinI GGWCC 2 cut(s) 39, 1423
SmaI CCCGGG 1 cut(s) 87
SmiMI CAYNNNNRTG 2 cut(s) 327, 650
SmlI CTYRAG 4 cut(s) 487, 638, 840, 938
SmoI CTYRAG 4 cut(s) 487, 638, 840, 938
SsiI CCGC 5 cut(s) 46, 91, 911, 1439, 1521
SspI AATATT 1 cut(s) 289
SspMI CTAG 2 cut(s) 512, 1037
StyD4I CCNGG 6 cut(s) 41, 84, 85, 865, 1191, 1541
StyI CCWWGG 2 cut(s) 645, 805
TaaI ACNGT 1 cut(s) 1321
TaiI ACGT 1 cut(s) 75
TaqI TCGA 5 cut(s) 50, 406, 855, 1188, 1474
TatI WGTACW 3 cut(s) 847, 957, 1549
TauI GCSGC 1 cut(s) 914
TfiI GAWTC 3 cut(s) 1049, 1471, 1485
Tru1I TTAA 3 cut(s) 383, 551, 626
Tru9I TTAA 3 cut(s) 383, 551, 626
TscAI CASTG 1 cut(s) 214
TseFI GTSAC 1 cut(s) 436
TseI GCWGC 4 cut(s) 483, 1114, 1163, 1268
Tsp45I GTSAC 1 cut(s) 436
TspGWI ACGGA 2 cut(s) 419, 1108
TspMI CCCGGG 1 cut(s) 85
TspRI CASTG 1 cut(s) 214
VpaK11BI GGWCC 2 cut(s) 39, 1423
VspI ATTAAT 1 cut(s) 626
XagI CCTNNNNNAGG 1 cut(s) 1201
XapI RAATTY 4 cut(s) 249, 467, 821, 1516
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 1 cut(s) 264
XmaI CCCGGG 1 cut(s) 85
XspI CTAG 2 cut(s) 512, 1037
ZrmI AGTACT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.