RchiOBHm_Chr5g0002011

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0003193
Physical Location & Seq
Forward (+)
1138480 .. 1144322
5843 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28339

Sequence Viewer

Length: 1821 bp
ATGACCATTTTCCGACGAATTATACTCCGAACAGCTCGGACCCGGCCGTCAGTCCCCCAAACCCTAAACCCTCCTCCACGTGCTTGCTCACGTGACCTCCCAAATCCCCGCCTTCTCTGCCACCGGTGTTTTGAGCAACCATATCATTCCAGTGCATATGAAATTGAGGTGGTGAAAGCTGTGCCAAGCCGAAGCGGTGCTGGCGGGCTGTATCGTATGTATCCGGCTGTTTTGGCTGGTTTGATTGGACTTGGAGGTCTGGAGGTGGCTTATGCAGATGCTGAGGAGGCTGCTTCCAAGCAGGGTTTGCCGGCTGATGCCCCTGCGAATAACGTGGAGGAAATTGCCAAGAAGCAGAGACAAGAAATTGAGGACTTGCTCAAGAGTAAAGGGATCCAACGTGGTTCTTATCCCAACTTTAGTGTTTCTGTCAAGGGGCAAAAGGTAGCCATCAAGTTCCAAATTCCTCCTGCATGTGAAGCTTCACAAGTGATTGCAAATATTGCTTCTAATCTTGGCTTGAAAGTTGAAGGGCATGGTGGTGGTTCAGATATCTCATTACGCGCTTGGGACAGTGGAGTTGCTTGGCAACTCATGCTTATGCACCCAGAGAAACAGAAGGAAACTGAAGGTGATCAAGGGGAATTAAAAGATGTGAACGAACATGATCGAGATCTGCACATCCTCGTTTTCCGTTCAGTCATTACCTCAACAGAAAAAGCTGAAATTGAATTTATGAAGCAGGGCAGCTTGAGTCCCAAAGAGCTTGATGCTCTGGTATCTGCTTTACAGTTAGCTGGGACAAAAAAGAGCTTGATCCATGAGAAAAAATCTACCACAGAACAAAGAGTGAGGGAAGATAGCGCACAAACTTCATCTATAGAGAAATTAATAACCAGTCTTGAGTCCATGGGAGTGAGAGTTTATGGAGTTGATGAACCCAATATGAGTTCTACAAGCAAAGATATTTCATGGGATAATCTTGCTGGATATGATCTGCAAAAGCGACAGATAGAAGACACAATACTACTGGCTTTGCTTAGTCCTGAAACATATGATGAAATTGCCCGTGGAACTCGTTGCAAATTTGAGTCAAACAGACCTCGAGCTGTACTCTTCGAAGGCCCACCAGGTACAGGGAAAACTTCTTCTGCTCGTGTCATTGCTAATCAAGCGGCCGTCCCGATGTTATATGTTCCCCTTGAGGTTATCTTGTCCAAGTACTATGGTGAGAGTGAACGATTATTAGGGAAGGTGTTTTCACTTGCTAATGAACTCCCAGATGGTGCTATTATTTTTCTAGATGAGGTTGATTCGTTTGCTATTTCGCGAGATAGTGATATGCATGAAGCCACACGGAGAGTTTTATCAGTTTTGCTGCGACAGATTGATGGATTTGAACAGGATAAGAAAGTGGTTGTAATTGCTGCAACAAATAGGAAGCAAGACCTCGACCCAGCCTTGATCAGTCGGTTCGATTCAATTATCCCATTTGGCCTACCTGATCATCAAAATCGTAAGGAAATAGCAGCTCAGTATGCAAAGCATCTAACCGAAACTGAATTAGATGAATTGGCAACAGTAACAGAAGAGATGTCTGGAAGGGATATCAGAGATGTGTGTCAACAAGCAGAGCGGTCGTGGGCATCAAAGCTGATCCGAGGAAAAGTACCCAAAGACGGAGACCAAATCCATCTTCCACCTCTGCAGCACTACATAGCGAGTGCCATGAATCGACGCAAGGGTTTCCTGAGCTCCCCACCCGGACAAACCCAAAATTCCGCATCTGACATAAAGAAGGCCAGGGTTGTACTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
AAA

Protein Analysis

606

Amino Acids

66.97

Weight (kDa)

6.37

Isoelectric Point (pI)

55.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 371 - 499 1.6e-35 ATPase family associated with various cellular activities (AAA)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 46, 255
AccBSI CCGCTC 1 cut(s) 1636
AccII CGCG 2 cut(s) 564, 1330
AciI CCGC 6 cut(s) 109, 195, 204, 1175, 1636, 1782
AclWI GGATC 4 cut(s) 388, 401, 811, 1651
AcoI YGGCCR 2 cut(s) 44, 1176
AcsI RAATTY 4 cut(s) 462, 731, 1085, 1777
AcuI CTGAAG 1 cut(s) 648
AcvI CACGTG 2 cut(s) 80, 92
AfaI GTAC 5 cut(s) 1113, 1135, 1223, 1671, 1812
AfiI CCNNNNNNNGG 2 cut(s) 1136, 1679
AgeI ACCGGT 1 cut(s) 123
AgsI TTSAA 5 cut(s) 523, 530, 731, 1400, 1482
AjnI CCWGG 2 cut(s) 1129, 1802
AjuI GAANNNNNNNTTGG 2 cut(s) 1680, 1712
Alw21I GWGCWC 1 cut(s) 1757
Alw26I GTCTC 2 cut(s) 352, 1677
AlwI GGATC 4 cut(s) 388, 401, 811, 1651
AlwNI CAGNNNCTG 1 cut(s) 281
Ama87I CYCGRG 1 cut(s) 1104
AoxI GGCC 5 cut(s) 44, 1123, 1176, 1495, 1800
ApeKI GCWGC 6 cut(s) 290, 747, 1378, 1427, 1529, 1708
ApoI RAATTY 4 cut(s) 462, 731, 1085, 1777
AseI ATTAAT 1 cut(s) 890
AsiGI ACCGGT 1 cut(s) 123
AspLEI GCGC 2 cut(s) 566, 866
AspS9I GGNCC 2 cut(s) 39, 1124
AsuC2I CCSGG 2 cut(s) 43, 1764
AsuHPI GGTGA 3 cut(s) 184, 644, 1241
AsuII TTCGAA 1 cut(s) 1119
AvaI CYCGRG 1 cut(s) 1104
AvaII GGWCC 1 cut(s) 39
BamHI GGATCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 1757
BarI GAAGNNNNNNTAC 2 cut(s) 1008, 1040
BauI CACGAG 1 cut(s) 1155
BbrPI CACGTG 2 cut(s) 80, 92
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 1 cut(s) 1757
BbvCI CCTCAGC 1 cut(s) 282
BbvI GCAGC 6 cut(s) 277, 759, 1365, 1414, 1541, 1720
BccI CCATC 4 cut(s) 458, 1277, 1385, 1701
BceAI ACGGC 2 cut(s) 31, 1163
BcgI CGANNNNNNTGC 2 cut(s) 1620, 1654
BciT130I CCWGG 2 cut(s) 1131, 1804
BciVI GTATCC 1 cut(s) 231
BclI TGATCA 3 cut(s) 634, 1464, 1504
BcnI CCSGG 2 cut(s) 43, 1764
BcoDI GTCTC 2 cut(s) 352, 1677
BfaI CTAG 1 cut(s) 1301
BfmI CTRYAG 2 cut(s) 879, 1706
BfuI GTATCC 1 cut(s) 231
BglII AGATCT 1 cut(s) 673
BisI GCNGC 7 cut(s) 291, 748, 1176, 1379, 1428, 1530, 1709
BlsI GCNGC 7 cut(s) 292, 749, 1177, 1380, 1429, 1531, 1710
BmcAI AGTACT 1 cut(s) 1223
Bme1390I CCNGG 4 cut(s) 43, 1131, 1764, 1804
Bme18I GGWCC 1 cut(s) 39
BmeT110I CYCGRG 1 cut(s) 1104
BmgT120I GGNCC 2 cut(s) 39, 1124
BmiI GGNNCC 2 cut(s) 41, 395
BmrFI CCNGG 4 cut(s) 43, 1131, 1764, 1804
BmsI GCATC 6 cut(s) 268, 307, 760, 1555, 1655, 1793
BpiI GAAGAC 1 cut(s) 1023
BplI GAGNNNNNCTC 2 cut(s) 1098, 1130
BpmI CTGGAG 1 cut(s) 281
Bpu10I CCTNAGC 2 cut(s) 282, 1751
Bpu14I TTCGAA 1 cut(s) 1119
BpuEI CTTGAG 4 cut(s) 365, 772, 923, 1223
BpuMI CCSGG 2 cut(s) 43, 1764
BsaAI YACGTR 2 cut(s) 80, 92
BsaBI GATNNNNATC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 1677
BsaJI CCNNGG 4 cut(s) 909, 1069, 1660, 1803
BsaWI WCCGGW 1 cut(s) 123
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 906, 936
Bsc4I CCNNNNNNNGG 2 cut(s) 1136, 1679
Bse118I RCCGGY 2 cut(s) 123, 310
Bse1I ACTGG 3 cut(s) 150, 897, 1035
Bse3DI GCAATG 1 cut(s) 1161
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 2 cut(s) 1131, 1804
BseDI CCNNGG 4 cut(s) 909, 1069, 1660, 1803
BseGI GGATG 1 cut(s) 681
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 2 cut(s) 1136, 1679
BseMI GCAATG 1 cut(s) 1161
BseMII CTCAG 3 cut(s) 273, 1547, 1742
BseNI ACTGG 3 cut(s) 150, 897, 1035
BseRI GAGGAG 2 cut(s) 63, 299
BseX3I CGGCCG 2 cut(s) 44, 1176
BseXI GCAGC 6 cut(s) 277, 759, 1365, 1414, 1541, 1720
BseYI CCCAGC 2 cut(s) 797, 1456
BsgI GTGCAG 1 cut(s) 662
Bsh1236I CGCG 2 cut(s) 564, 1330
Bsh1285I CGRYCG 3 cut(s) 47, 1179, 1640
BshFI GGCC 5 cut(s) 46, 1125, 1178, 1497, 1802
BshTI ACCGGT 1 cut(s) 123
BsiEI CGRYCG 3 cut(s) 47, 1179, 1640
BsiHKAI GWGCWC 1 cut(s) 1757
BsiHKCI CYCGRG 1 cut(s) 1104
BsiSI CCGG 5 cut(s) 43, 124, 224, 311, 1764
BslFI GGGAC 5 cut(s) 38, 584, 741, 814, 1166
BslI CCNNNNNNNGG 2 cut(s) 1136, 1679
BsmAI GTCTC 2 cut(s) 352, 1677
BsmFI GGGAC 5 cut(s) 38, 584, 741, 814, 1166
BsnI GGCC 5 cut(s) 46, 1125, 1178, 1497, 1802
Bso31I GGTCTC 1 cut(s) 1677
BsoBI CYCGRG 1 cut(s) 1104
Bsp119I TTCGAA 1 cut(s) 1119
Bsp1286I GDGCHC 1 cut(s) 1757
Bsp143I GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
Bsp19I CCATGG 1 cut(s) 909
Bsp68I TCGCGA 1 cut(s) 1330
BspACI CCGC 6 cut(s) 109, 195, 204, 1175, 1636, 1782
BspANI GGCC 5 cut(s) 46, 1125, 1178, 1497, 1802
BspCNI CTCAG 3 cut(s) 274, 1546, 1743
BspFNI CGCG 2 cut(s) 564, 1330
BspLI GGNNCC 2 cut(s) 41, 395
BspMAI CTGCAG 1 cut(s) 1710
BspPI GGATC 4 cut(s) 388, 401, 811, 1651
BspT104I TTCGAA 1 cut(s) 1119
BspTNI GGTCTC 1 cut(s) 1677
BsrBI CCGCTC 1 cut(s) 1636
BsrDI GCAATG 1 cut(s) 1161
BsrFI RCCGGY 2 cut(s) 123, 310
BsrI ACTGG 3 cut(s) 150, 897, 1035
BssAI RCCGGY 2 cut(s) 123, 310
BssECI CCNNGG 4 cut(s) 909, 1069, 1660, 1803
BssMI GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
BssSI CACGAG 1 cut(s) 1155
BssT1I CCWWGG 1 cut(s) 909
Bst2BI CACGAG 1 cut(s) 1155
Bst2UI CCWGG 2 cut(s) 1131, 1804
Bst4CI ACNGT 3 cut(s) 575, 792, 1582
Bst6I CTCTTC 2 cut(s) 1121, 1584
BstAPI GCANNNNNTGC 3 cut(s) 307, 503, 595
BstBAI YACGTR 2 cut(s) 80, 92
BstBI TTCGAA 1 cut(s) 1119
BstC8I GCNNGC 4 cut(s) 85, 202, 206, 312
BstDEI CTNAG 4 cut(s) 282, 1040, 1533, 1751
BstDSI CCRYGG 2 cut(s) 909, 1069
BstF5I GGATG 1 cut(s) 681
BstFNI CGCG 2 cut(s) 564, 1330
BstHHI GCGC 2 cut(s) 566, 866
BstKTI GATC 9 cut(s) 396, 637, 670, 676, 819, 997, 1467, 1507, 1659
BstMAI GTCTC 2 cut(s) 352, 1677
BstMBI GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
BstMCI CGRYCG 3 cut(s) 47, 1179, 1640
BstNI CCWGG 2 cut(s) 1131, 1804
BstNSI RCATGY 1 cut(s) 477
BstSCI CCNGG 4 cut(s) 41, 1129, 1762, 1802
BstSFI CTRYAG 2 cut(s) 879, 1706
BstUI CGCG 2 cut(s) 564, 1330
BstV1I GCAGC 6 cut(s) 277, 759, 1365, 1414, 1541, 1720
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 2 cut(s) 393, 673
BstYI RGATCY 2 cut(s) 393, 673
BstZI CGGCCG 2 cut(s) 44, 1176
BsuI GTATCC 1 cut(s) 231
BsuRI GGCC 5 cut(s) 46, 1125, 1178, 1497, 1802
BtgI CCRYGG 2 cut(s) 909, 1069
BtsCI GGATG 1 cut(s) 681
BtsIMutI CAGTG 2 cut(s) 157, 580
BtuMI TCGCGA 1 cut(s) 1330
Cac8I GCNNGC 4 cut(s) 85, 202, 206, 312
CaiI CAGNNNCTG 1 cut(s) 281
CfoI GCGC 2 cut(s) 566, 866
Cfr10I RCCGGY 2 cut(s) 123, 310
Cfr13I GGNCC 2 cut(s) 39, 1124
CseI GACGC 1 cut(s) 1746
CsiI ACCWGGT 1 cut(s) 1129
Csp6I GTAC 5 cut(s) 1112, 1134, 1222, 1670, 1811
CspAI ACCGGT 1 cut(s) 123
CviAII CATG 9 cut(s) 474, 536, 595, 665, 821, 910, 972, 1346, 1729
CviQI GTAC 5 cut(s) 1112, 1134, 1222, 1670, 1811
DdeI CTNAG 4 cut(s) 282, 1040, 1533, 1751
DpnI GATC 9 cut(s) 395, 636, 669, 675, 818, 996, 1466, 1506, 1658
DpnII GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
DrdI GACNNNNNNGTC 2 cut(s) 46, 255
DseDI GACNNNNNNGTC 2 cut(s) 46, 255
EaeI YGGCCR 2 cut(s) 44, 1176
EagI CGGCCG 2 cut(s) 44, 1176
Eam1104I CTCTTC 2 cut(s) 1121, 1584
EarI CTCTTC 2 cut(s) 1121, 1584
Ecl136II GAGCTC 1 cut(s) 1755
EclXI CGGCCG 2 cut(s) 44, 1176
Eco130I CCWWGG 1 cut(s) 909
Eco24I GRGCYC 1 cut(s) 1757
Eco31I GGTCTC 1 cut(s) 1677
Eco32I GATATC 2 cut(s) 553, 1609
Eco47I GGWCC 1 cut(s) 39
Eco52I CGGCCG 2 cut(s) 44, 1176
Eco53kI GAGCTC 1 cut(s) 1755
Eco57I CTGAAG 1 cut(s) 648
Eco72I CACGTG 2 cut(s) 80, 92
Eco88I CYCGRG 1 cut(s) 1104
EcoICRI GAGCTC 1 cut(s) 1755
EcoRII CCWGG 2 cut(s) 1129, 1802
EcoRV GATATC 2 cut(s) 553, 1609
EcoT14I CCWWGG 1 cut(s) 909
EcoT22I ATGCAT 1 cut(s) 1347
EcoT38I GRGCYC 1 cut(s) 1757
ErhI CCWWGG 1 cut(s) 909
FaeI CATG 9 cut(s) 477, 539, 598, 668, 824, 913, 975, 1349, 1732
FaqI GGGAC 5 cut(s) 38, 584, 741, 814, 1166
FatI CATG 9 cut(s) 473, 535, 594, 664, 820, 909, 971, 1345, 1728
FauI CCCGC 2 cut(s) 116, 197
FauNDI CATATG 2 cut(s) 157, 1054
FbaI TGATCA 3 cut(s) 634, 1464, 1504
Fnu4HI GCNGC 7 cut(s) 291, 748, 1176, 1379, 1428, 1530, 1709
FokI GGATG 1 cut(s) 668
FriOI GRGCYC 1 cut(s) 1757
Fsp4HI GCNGC 7 cut(s) 291, 748, 1176, 1379, 1428, 1530, 1709
FspBI CTAG 1 cut(s) 1301
GlaI GCGC 2 cut(s) 565, 865
GluI GCNGC 7 cut(s) 291, 748, 1176, 1379, 1428, 1530, 1709
GsaI CCCAGC 2 cut(s) 801, 1460
GsuI CTGGAG 1 cut(s) 281
HaeIII GGCC 5 cut(s) 46, 1125, 1178, 1497, 1802
HapII CCGG 5 cut(s) 43, 124, 224, 311, 1764
HgaI GACGC 1 cut(s) 1746
HhaI GCGC 2 cut(s) 566, 866
Hin1II CATG 9 cut(s) 477, 539, 598, 668, 824, 913, 975, 1349, 1732
Hin6I GCGC 2 cut(s) 564, 864
HinP1I GCGC 2 cut(s) 564, 864
HincII GTYRAC 1 cut(s) 1625
HindII GTYRAC 1 cut(s) 1625
HindIII AAGCTT 1 cut(s) 480
HinfI GANTC 6 cut(s) 754, 905, 1091, 1313, 1478, 1732
HpaII CCGG 5 cut(s) 43, 124, 224, 311, 1764
HphI GGTGA 3 cut(s) 184, 644, 1241
Hpy166II GTNNAC 3 cut(s) 658, 1238, 1625
Hpy188I TCNGA 7 cut(s) 14, 29, 39, 550, 1613, 1661, 1789
Hpy8I GTNNAC 3 cut(s) 658, 1238, 1625
Hpy99I CGWCG 2 cut(s) 18, 1740
HpyAV CCTTC 8 cut(s) 122, 524, 613, 623, 1115, 1246, 1596, 1792
HpyCH4III ACNGT 3 cut(s) 575, 792, 1582
HpyCH4IV ACGT 4 cut(s) 79, 91, 333, 400
HpyF3I CTNAG 4 cut(s) 282, 1040, 1533, 1751
HpySE526I ACGT 4 cut(s) 79, 91, 333, 400
Hsp92II CATG 9 cut(s) 477, 539, 598, 668, 824, 913, 975, 1349, 1732
HspAI GCGC 2 cut(s) 564, 864
KroI GCCGGC 1 cut(s) 310
KroNI GCCGGC 1 cut(s) 312
Ksp22I TGATCA 3 cut(s) 634, 1464, 1504
Kzo9I GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
LmnI GCTCC 1 cut(s) 1760
Lsp1109I GCAGC 6 cut(s) 277, 759, 1365, 1414, 1541, 1720
LweI GCATC 6 cut(s) 268, 307, 760, 1555, 1655, 1793
MabI ACCWGGT 1 cut(s) 1129
MaeI CTAG 1 cut(s) 1301
MaeII ACGT 4 cut(s) 79, 91, 333, 400
MaeIII GTNAC 2 cut(s) 92, 1582
MalI GATC 9 cut(s) 395, 636, 669, 675, 818, 996, 1466, 1506, 1658
MbiI CCGCTC 1 cut(s) 1636
MboI GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
MboII GAAGA 6 cut(s) 869, 1028, 1108, 1140, 1601, 1688
MflI RGATCY 2 cut(s) 393, 673
MhlI GDGCHC 1 cut(s) 1757
MlyI GAGTC 3 cut(s) 763, 914, 1100
MmeI TCCRAC 2 cut(s) 37, 421
Mph1103I ATGCAT 1 cut(s) 1347
MroNI GCCGGC 1 cut(s) 310
MseI TTAA 2 cut(s) 647, 890
MslI CAYNNNNRTG 4 cut(s) 150, 540, 599, 914
MspI CCGG 5 cut(s) 43, 124, 224, 311, 1764
MspR9I CCNGG 4 cut(s) 43, 1131, 1764, 1804
MvaI CCWGG 2 cut(s) 1131, 1804
MvnI CGCG 2 cut(s) 564, 1330
NaeI GCCGGC 1 cut(s) 312
NciI CCSGG 2 cut(s) 43, 1764
NcoI CCATGG 1 cut(s) 909
NdeI CATATG 2 cut(s) 157, 1054
NdeII GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
NgoMIV GCCGGC 1 cut(s) 310
NlaIII CATG 9 cut(s) 477, 539, 598, 668, 824, 913, 975, 1349, 1732
NlaIV GGNNCC 2 cut(s) 41, 395
NmuCI GTSAC 1 cut(s) 92
NruI TCGCGA 1 cut(s) 1330
NsiI ATGCAT 1 cut(s) 1347
NspI RCATGY 1 cut(s) 477
NspV TTCGAA 1 cut(s) 1119
PaeR7I CTCGAG 1 cut(s) 1104
PdiI GCCGGC 1 cut(s) 312
PfeI GAWTC 3 cut(s) 1313, 1478, 1732
PinAI ACCGGT 1 cut(s) 123
PkrI GCNGC 7 cut(s) 292, 749, 1177, 1380, 1429, 1531, 1710
PleI GAGTC 3 cut(s) 762, 913, 1099
PmaCI CACGTG 2 cut(s) 80, 92
PmlI CACGTG 2 cut(s) 80, 92
PpsI GAGTC 3 cut(s) 762, 913, 1099
Ppu21I YACGTR 2 cut(s) 80, 92
PshBI ATTAAT 1 cut(s) 890
Psp124BI GAGCTC 1 cut(s) 1757
Psp6I CCWGG 2 cut(s) 1129, 1802
PspCI CACGTG 2 cut(s) 80, 92
PspFI CCCAGC 2 cut(s) 797, 1456
PspGI CCWGG 2 cut(s) 1129, 1802
PspN4I GGNNCC 2 cut(s) 41, 395
PspPI GGNCC 2 cut(s) 39, 1124
PspXI VCTCGAGB 1 cut(s) 1104
PstI CTGCAG 1 cut(s) 1710
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 2 cut(s) 393, 673
RruI TCGCGA 1 cut(s) 1330
RsaI GTAC 5 cut(s) 1113, 1135, 1223, 1671, 1812
RsaNI GTAC 5 cut(s) 1112, 1134, 1222, 1670, 1811
RseI CAYNNNNRTG 4 cut(s) 150, 540, 599, 914
SacI GAGCTC 1 cut(s) 1757
SaqAI TTAA 2 cut(s) 647, 890
SatI GCNGC 7 cut(s) 291, 748, 1176, 1379, 1428, 1530, 1709
Sau3AI GATC 9 cut(s) 393, 634, 667, 673, 816, 994, 1464, 1504, 1656
Sau96I GGNCC 2 cut(s) 39, 1124
ScaI AGTACT 1 cut(s) 1223
SchI GAGTC 3 cut(s) 763, 914, 1100
ScrFI CCNGG 4 cut(s) 43, 1131, 1764, 1804
SduI GDGCHC 1 cut(s) 1757
SexAI ACCWGGT 1 cut(s) 1129
SfaNI GCATC 6 cut(s) 268, 307, 760, 1555, 1655, 1793
SfcI CTRYAG 2 cut(s) 879, 1706
Sfr274I CTCGAG 1 cut(s) 1104
SfuI TTCGAA 1 cut(s) 1119
SgrAI CRCCGGYG 1 cut(s) 123
SinI GGWCC 1 cut(s) 39
SlaI CTCGAG 1 cut(s) 1104
SmiMI CAYNNNNRTG 4 cut(s) 150, 540, 599, 914
SmlI CTYRAG 5 cut(s) 380, 751, 902, 1104, 1202
SmoI CTYRAG 5 cut(s) 380, 751, 902, 1104, 1202
SsiI CCGC 6 cut(s) 109, 195, 204, 1175, 1636, 1782
SspI AATATT 1 cut(s) 502
SspMI CTAG 1 cut(s) 1301
SstI GAGCTC 1 cut(s) 1757
StyD4I CCNGG 4 cut(s) 41, 1129, 1762, 1802
StyI CCWWGG 1 cut(s) 909
TaaI ACNGT 3 cut(s) 575, 792, 1582
TaiI ACGT 4 cut(s) 82, 94, 336, 403
TaqI TCGA 6 cut(s) 670, 1105, 1119, 1452, 1476, 1735
TatI WGTACW 3 cut(s) 1111, 1221, 1810
TauI GCSGC 1 cut(s) 1178
TfiI GAWTC 3 cut(s) 1313, 1478, 1732
Tru1I TTAA 2 cut(s) 647, 890
Tru9I TTAA 2 cut(s) 647, 890
TscAI CASTG 2 cut(s) 157, 580
TseFI GTSAC 1 cut(s) 92
TseI GCWGC 6 cut(s) 290, 747, 1378, 1427, 1529, 1708
Tsp45I GTSAC 1 cut(s) 92
TspGWI ACGGA 3 cut(s) 683, 1372, 1695
TspRI CASTG 2 cut(s) 157, 580
VpaK11BI GGWCC 1 cut(s) 39
VspI ATTAAT 1 cut(s) 890
XapI RAATTY 4 cut(s) 462, 731, 1085, 1777
XbaI TCTAGA 1 cut(s) 1300
XceI RCATGY 1 cut(s) 477
XhoI CTCGAG 1 cut(s) 1104
XspI CTAG 1 cut(s) 1301
ZrmI AGTACT 1 cut(s) 1223
Zsp2I ATGCAT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.