No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g04381 |
| malus_domestica | MD05G1323400.v1.1 MD10G1301200.v1.1 |
| prunus_persica | Prupe.4G039100_v2.0.a1 Prupe.4G039200_v2.0.a1 |
| pyrus_communis | pycom05g29770 pycom05g29780 |
| rosa_chinensis | RchiOBHm_Chr5g0006771 RchiOBHm_Chr5g0006781 RchiOBHm_Chr5g0006791 RchiOBHm_Chr5g0006801 RchiOBHm_Chr5g0006811 |
| rosa_laevigata | RLG00000031430 |
| rosa_roxburghii | Rroxscaffold_1G00069240 Rroxscaffold_1G00069260 |
| rosa_rugosa | Rorug04G0424600 |
| rosa_samantha | Rh5BG051200 Rh5BG051300 Rh5CG059800 Rh5DG050400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 64 |
| AciI | CCGC | 3 cut(s) | 62, 64, 74 |
| AfaI | GTAC | 1 cut(s) | 437 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 30, 95, 177, 312, 356 |
| AjnI | CCWGG | 1 cut(s) | 311 |
| AluBI | AGCT | 2 cut(s) | 9, 227 |
| AluI | AGCT | 2 cut(s) | 9, 227 |
| Alw21I | GWGCWC | 1 cut(s) | 11 |
| Alw26I | GTCTC | 1 cut(s) | 327 |
| ApeKI | GCWGC | 1 cut(s) | 442 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 1 cut(s) | 334 |
| BanII | GRGCYC | 1 cut(s) | 11 |
| Bbv12I | GWGCWC | 1 cut(s) | 11 |
| BbvCI | CCTCAGC | 2 cut(s) | 159, 420 |
| BbvI | GCAGC | 1 cut(s) | 454 |
| BccI | CCATC | 4 cut(s) | 155, 277, 416, 436 |
| BciT130I | CCWGG | 1 cut(s) | 313 |
| BciVI | GTATCC | 1 cut(s) | 230 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BcoDI | GTCTC | 1 cut(s) | 327 |
| BfaI | CTAG | 1 cut(s) | 453 |
| BfuI | GTATCC | 1 cut(s) | 230 |
| BisI | GCNGC | 2 cut(s) | 62, 443 |
| BlsI | GCNGC | 2 cut(s) | 63, 444 |
| Bme1390I | CCNGG | 2 cut(s) | 31, 313 |
| BmrFI | CCNGG | 2 cut(s) | 31, 313 |
| Bpu10I | CCTNAGC | 2 cut(s) | 159, 420 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| BsaJI | CCNNGG | 2 cut(s) | 62, 256 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 30, 95, 177, 312, 356 |
| BseBI | CCWGG | 1 cut(s) | 313 |
| BseDI | CCNNGG | 2 cut(s) | 62, 256 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 30, 95, 177, 312, 356 |
| BseMII | CTCAG | 3 cut(s) | 173, 411, 434 |
| BseRI | GAGGAG | 2 cut(s) | 147, 408 |
| BseXI | GCAGC | 1 cut(s) | 454 |
| BseYI | CCCAGC | 1 cut(s) | 223 |
| BsgI | GTGCAG | 1 cut(s) | 282 |
| Bsh1236I | CGCG | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 11 |
| BsiSI | CCGG | 2 cut(s) | 31, 330 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 30, 95, 177, 312, 356 |
| BsmAI | GTCTC | 1 cut(s) | 327 |
| BsmI | GAATGC | 1 cut(s) | 445 |
| Bsp1286I | GDGCHC | 1 cut(s) | 11 |
| Bsp1407I | TGTACA | 1 cut(s) | 435 |
| Bsp19I | CCATGG | 1 cut(s) | 256 |
| BspACI | CCGC | 3 cut(s) | 62, 64, 74 |
| BspCNI | CTCAG | 3 cut(s) | 172, 410, 433 |
| BspFNI | CGCG | 1 cut(s) | 64 |
| BsrGI | TGTACA | 1 cut(s) | 435 |
| BssECI | CCNNGG | 2 cut(s) | 62, 256 |
| BssT1I | CCWWGG | 1 cut(s) | 256 |
| Bst2UI | CCWGG | 1 cut(s) | 313 |
| Bst4CI | ACNGT | 3 cut(s) | 50, 139, 190 |
| Bst6I | CTCTTC | 2 cut(s) | 86, 347 |
| BstAUI | TGTACA | 1 cut(s) | 435 |
| BstDEI | CTNAG | 3 cut(s) | 159, 397, 420 |
| BstDSI | CCRYGG | 2 cut(s) | 62, 256 |
| BstFNI | CGCG | 1 cut(s) | 64 |
| BstMAI | GTCTC | 1 cut(s) | 327 |
| BstNI | CCWGG | 1 cut(s) | 313 |
| BstSCI | CCNGG | 2 cut(s) | 29, 311 |
| BstUI | CGCG | 1 cut(s) | 64 |
| BstV1I | GCAGC | 1 cut(s) | 454 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 319 |
| BsuI | GTATCC | 1 cut(s) | 230 |
| BtgI | CCRYGG | 2 cut(s) | 62, 256 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 2 cut(s) | 12, 195 |
| Cfr42I | CCGCGG | 1 cut(s) | 65 |
| CseI | GACGC | 2 cut(s) | 152, 413 |
| Csp6I | GTAC | 1 cut(s) | 436 |
| CviAII | CATG | 4 cut(s) | 40, 172, 197, 257 |
| CviJI | RGCY | 5 cut(s) | 9, 38, 131, 227, 299 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 38, 131, 227, 299 |
| CviQI | GTAC | 1 cut(s) | 436 |
| DdeI | CTNAG | 3 cut(s) | 159, 397, 420 |
| Eam1104I | CTCTTC | 2 cut(s) | 86, 347 |
| EarI | CTCTTC | 2 cut(s) | 86, 347 |
| Ecl136II | GAGCTC | 1 cut(s) | 9 |
| Eco130I | CCWWGG | 1 cut(s) | 256 |
| Eco24I | GRGCYC | 1 cut(s) | 11 |
| Eco53kI | GAGCTC | 1 cut(s) | 9 |
| EcoICRI | GAGCTC | 1 cut(s) | 9 |
| EcoRII | CCWGG | 1 cut(s) | 311 |
| EcoT14I | CCWWGG | 1 cut(s) | 256 |
| EcoT38I | GRGCYC | 1 cut(s) | 11 |
| ErhI | CCWWGG | 1 cut(s) | 256 |
| FaeI | CATG | 4 cut(s) | 43, 175, 200, 260 |
| FaiI | YATR | 4 cut(s) | 41, 173, 198, 258 |
| FatI | CATG | 4 cut(s) | 39, 171, 196, 256 |
| FauI | CCCGC | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 2 cut(s) | 62, 443 |
| FriOI | GRGCYC | 1 cut(s) | 11 |
| Fsp4HI | GCNGC | 2 cut(s) | 62, 443 |
| FspBI | CTAG | 1 cut(s) | 453 |
| GluI | GCNGC | 2 cut(s) | 62, 443 |
| GsaI | CCCAGC | 1 cut(s) | 227 |
| HapII | CCGG | 2 cut(s) | 31, 330 |
| HgaI | GACGC | 2 cut(s) | 152, 413 |
| Hin1II | CATG | 4 cut(s) | 43, 175, 200, 260 |
| HinfI | GANTC | 1 cut(s) | 181 |
| HpaII | CCGG | 2 cut(s) | 31, 330 |
| HphI | GGTGA | 1 cut(s) | 334 |
| Hpy166II | GTNNAC | 1 cut(s) | 325 |
| Hpy188I | TCNGA | 3 cut(s) | 90, 280, 351 |
| Hpy8I | GTNNAC | 1 cut(s) | 325 |
| HpyCH4III | ACNGT | 3 cut(s) | 50, 139, 190 |
| HpyCH4V | TGCA | 2 cut(s) | 193, 263 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 397, 420 |
| Hsp92II | CATG | 4 cut(s) | 43, 175, 200, 260 |
| KspI | CCGCGG | 1 cut(s) | 65 |
| LmnI | GCTCC | 1 cut(s) | 14 |
| LpnPI | CCDG | 7 cut(s) | 44, 84, 162, 237, 298, 325, 343 |
| Lsp1109I | GCAGC | 1 cut(s) | 454 |
| MaeI | CTAG | 1 cut(s) | 453 |
| MboII | GAAGA | 6 cut(s) | 103, 142, 364, 379, 403, 441 |
| MhlI | GDGCHC | 1 cut(s) | 11 |
| MluCI | AATT | 1 cut(s) | 268 |
| MnlI | CCTC | 5 cut(s) | 47, 89, 168, 348, 429 |
| MseI | TTAA | 2 cut(s) | 233, 457 |
| MspA1I | CMGCKG | 1 cut(s) | 64 |
| MspI | CCGG | 2 cut(s) | 31, 330 |
| MspR9I | CCNGG | 2 cut(s) | 31, 313 |
| Mva1269I | GAATGC | 1 cut(s) | 445 |
| MvaI | CCWGG | 1 cut(s) | 313 |
| MvnI | CGCG | 1 cut(s) | 64 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NcoI | CCATGG | 1 cut(s) | 256 |
| NlaIII | CATG | 4 cut(s) | 43, 175, 200, 260 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 347 |
| PctI | GAATGC | 1 cut(s) | 445 |
| PfeI | GAWTC | 1 cut(s) | 181 |
| PfoI | TCCNGGA | 2 cut(s) | 29, 311 |
| PkrI | GCNGC | 2 cut(s) | 63, 444 |
| Psp124BI | GAGCTC | 1 cut(s) | 11 |
| Psp6I | CCWGG | 1 cut(s) | 311 |
| PspFI | CCCAGC | 1 cut(s) | 223 |
| PspGI | CCWGG | 1 cut(s) | 311 |
| RsaI | GTAC | 1 cut(s) | 437 |
| RsaNI | GTAC | 1 cut(s) | 436 |
| SacI | GAGCTC | 1 cut(s) | 11 |
| SacII | CCGCGG | 1 cut(s) | 65 |
| SaqAI | TTAA | 2 cut(s) | 233, 457 |
| SatI | GCNGC | 2 cut(s) | 62, 443 |
| ScrFI | CCNGG | 2 cut(s) | 31, 313 |
| SduI | GDGCHC | 1 cut(s) | 11 |
| SetI | ASST | 4 cut(s) | 11, 58, 100, 229 |
| Sfr303I | CCGCGG | 1 cut(s) | 65 |
| SgrBI | CCGCGG | 1 cut(s) | 65 |
| Sse9I | AATT | 1 cut(s) | 268 |
| SsiI | CCGC | 3 cut(s) | 62, 64, 74 |
| SspMI | CTAG | 1 cut(s) | 453 |
| SstI | GAGCTC | 1 cut(s) | 11 |
| StyD4I | CCNGG | 2 cut(s) | 29, 311 |
| StyI | CCWWGG | 1 cut(s) | 256 |
| TaaI | ACNGT | 3 cut(s) | 50, 139, 190 |
| TasI | AATT | 1 cut(s) | 268 |
| TatI | WGTACW | 1 cut(s) | 435 |
| TauI | GCSGC | 1 cut(s) | 64 |
| TfiI | GAWTC | 1 cut(s) | 181 |
| Tru1I | TTAA | 2 cut(s) | 233, 457 |
| Tru9I | TTAA | 2 cut(s) | 233, 457 |
| TscAI | CASTG | 2 cut(s) | 19, 195 |
| TseI | GCWGC | 1 cut(s) | 442 |
| TspDTI | ATGAA | 1 cut(s) | 59 |
| TspGWI | ACGGA | 1 cut(s) | 156 |
| TspRI | CASTG | 2 cut(s) | 19, 195 |
| XspI | CTAG | 1 cut(s) | 453 |