Rh5CG059800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
4418869 .. 4420198
1330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG059800.1

Sequence Viewer

Length: 204 bp
ATGGAGCGTTCCACAGCCACTACCACTTCCGGGAGAGCAATGATGAACGCCAGTGACTTTTCACGGCGGTTTCCTGCGGGACGCCGTATTCCGAAGAGGGGTCAAGTGAAGATGGGGATAGTGGTGGGACTGGCCAATTCTGTGGCTTCCCTCTTCACTCCTCATGGTCCATCCATGCACAAGCAGCATTCAACCAAGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.26

Weight (kDa)

12.0

Isoelectric Point (pI)

60.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 67, 77
AcoI YGGCCR 1 cut(s) 132
AcyI GRCGYC 1 cut(s) 82
AfiI CCNNNNNNNGG 2 cut(s) 30, 98
AgsI TTSAA 1 cut(s) 192
AoxI GGCC 1 cut(s) 132
ApeKI GCWGC 1 cut(s) 184
AspS9I GGNCC 1 cut(s) 167
AsuC2I CCSGG 1 cut(s) 31
AvaII GGWCC 1 cut(s) 167
BalI TGGCCA 1 cut(s) 134
BbvI GCAGC 1 cut(s) 196
BccI CCATC 2 cut(s) 106, 178
BceAI ACGGC 2 cut(s) 69, 80
BcnI CCSGG 1 cut(s) 31
BisI GCNGC 1 cut(s) 185
BlsI GCNGC 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 31
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 1 cut(s) 167
BmrFI CCNGG 1 cut(s) 31
BpuMI CCSGG 1 cut(s) 31
BsaHI GRCGYC 1 cut(s) 82
Bsc4I CCNNNNNNNGG 2 cut(s) 30, 98
Bse1I ACTGG 2 cut(s) 51, 135
Bse3DI GCAATG 1 cut(s) 45
BseGI GGATG 1 cut(s) 170
BseLI CCNNNNNNNGG 2 cut(s) 30, 98
BseMI GCAATG 1 cut(s) 45
BseNI ACTGG 2 cut(s) 51, 135
BseRI GAGGAG 1 cut(s) 150
BseXI GCAGC 1 cut(s) 196
BshFI GGCC 1 cut(s) 134
BsiSI CCGG 1 cut(s) 30
BslFI GGGAC 2 cut(s) 93, 141
BslI CCNNNNNNNGG 2 cut(s) 30, 98
BsmFI GGGAC 2 cut(s) 93, 141
BsmI GAATGC 1 cut(s) 187
BsnI GGCC 1 cut(s) 134
BspACI CCGC 2 cut(s) 67, 77
BspANI GGCC 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 2 cut(s) 51, 135
BssNI GRCGYC 1 cut(s) 82
Bst6I CTCTTC 2 cut(s) 89, 158
BstACI GRCGYC 1 cut(s) 82
BstF5I GGATG 1 cut(s) 170
BstMWI GCNNNNNNNGC 1 cut(s) 184
BstSCI CCNGG 1 cut(s) 29
BstV1I GCAGC 1 cut(s) 196
BstXI CCANNNNNNTGG 1 cut(s) 142
BsuRI GGCC 1 cut(s) 134
BtsCI GGATG 1 cut(s) 170
BtsIMutI CAGTG 1 cut(s) 58
Cfr13I GGNCC 1 cut(s) 167
CseI GACGC 1 cut(s) 90
CviAII CATG 2 cut(s) 164, 175
CviJI RGCY 3 cut(s) 17, 134, 146
CviKI_1 RGCY 3 cut(s) 17, 134, 146
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 2 cut(s) 89, 158
EarI CTCTTC 2 cut(s) 89, 158
Eco47I GGWCC 1 cut(s) 167
FaeI CATG 2 cut(s) 167, 178
FaiI YATR 2 cut(s) 165, 176
FaqI GGGAC 2 cut(s) 93, 141
FatI CATG 2 cut(s) 163, 174
FauI CCCGC 1 cut(s) 70
Fnu4HI GCNGC 1 cut(s) 185
FokI GGATG 1 cut(s) 157
Fsp4HI GCNGC 1 cut(s) 185
GluI GCNGC 1 cut(s) 185
HaeIII GGCC 1 cut(s) 134
HapII CCGG 1 cut(s) 30
HgaI GACGC 1 cut(s) 90
Hin1I GRCGYC 1 cut(s) 82
Hin1II CATG 2 cut(s) 167, 178
HpaII CCGG 1 cut(s) 30
Hpy188I TCNGA 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 184
Hsp92I GRCGYC 1 cut(s) 82
Hsp92II CATG 2 cut(s) 167, 178
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 4 cut(s) 43, 64, 87, 116
Lsp1109I GCAGC 1 cut(s) 196
MaeIII GTNAC 1 cut(s) 53
MboII GAAGA 3 cut(s) 106, 121, 145
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 1 cut(s) 136
MluNI TGGCCA 1 cut(s) 134
MnlI CCTC 3 cut(s) 90, 161, 171
Mox20I TGGCCA 1 cut(s) 134
MscI TGGCCA 1 cut(s) 134
Msp20I TGGCCA 1 cut(s) 134
MspI CCGG 1 cut(s) 30
MspR9I CCNGG 1 cut(s) 31
Mva1269I GAATGC 1 cut(s) 187
MwoI GCNNNNNNNGC 1 cut(s) 184
NciI CCSGG 1 cut(s) 31
NlaIII CATG 2 cut(s) 167, 178
NmuCI GTSAC 1 cut(s) 53
PctI GAATGC 1 cut(s) 187
PfoI TCCNGGA 1 cut(s) 29
PkrI GCNGC 1 cut(s) 186
PspPI GGNCC 1 cut(s) 167
SatI GCNGC 1 cut(s) 185
Sau96I GGNCC 1 cut(s) 167
ScrFI CCNGG 1 cut(s) 31
SinI GGWCC 1 cut(s) 167
Sse9I AATT 1 cut(s) 136
SsiI CCGC 2 cut(s) 67, 77
StyD4I CCNGG 1 cut(s) 29
TasI AATT 1 cut(s) 136
TscAI CASTG 1 cut(s) 58
TseFI GTSAC 1 cut(s) 53
TseI GCWGC 1 cut(s) 184
Tsp45I GTSAC 1 cut(s) 53
TspDTI ATGAA 1 cut(s) 59
TspRI CASTG 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.