Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005230

Physical Location & Seq

Genomic Coordinates Reverse (-)

7374623 .. 7376314

Gene Structure 1692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g12401.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGAAATCTCTACTATTAGGACATCTTGTGCTCTGCTTCCTACTAATTGGAGGGTGCGAGGGCAGAAAAGTACCCAACCTCTCCCAGGACAAATCCGATTCCGAATCCTCCTTCGAGTACAATGCCATCAGCTGCAGAGCTCACAGCTTTTCGCTCACCGATTTCGGCGCAGTTGGAGACGGCAAGACATCAAACACAAAGGCCTTTCAAGCTGCAATCAACCACCTGAGCCAGTTCTCAGCCCAAGGCGGCGCTCAGCTTTACGTTCCGGCCGGGAAGTACTTAACCGGCAGCTTCAACCTCACCAGCCACTTCACCCTTTACCTCCATAAAGAAGCTGTCCTCCTCGCTTCTCAAGACCCCCAAGAATGGCCAGTCCTCAAACCACTCCCTTCTTACGGCAGAGGAAGGGACGCACCAGAAGGACGCTATGCCAGCCTCTTATTCGGAACCAACCTCACCGACGTCGTCATCACCGGAGACAACGGCACCATCGACGGCCAAGGTGAGTTCTGGTGGAACAAGTTCCATAGTAAAAAGTTACAGTACACACGCCCCTACCTCATTGAGGTCATGTTCTCCTCCAACGTGCAAATATCGAATCTCACTCTTATAAACTCTCCATCATGGAATGTACATCCCATTTACAGCAGCGATATACTAGTGCAAGGATTGACCATCTTAGCTCCGGTGAGCTCTCCCAACACAGATGGAGTTAACCCGGATTCATGCACAAATGTTAAGATAGAGGACTGCTACATTGTCTCAGGCGACGACTGTGTGGCGGTGAAGAGCGGCTGGGACCAGTACGGCGTGTCGTTTGGTATGCCAACCAAGCAACTAGTGATCAGAAGACTTACTTGTGTTTCTCCTTACAGTGCCGCCATTGCATTAGGGAGTGAGATGTCCGGAGGTATTGAAGATGTGAGGGCAGAAGACATCGTGGCCGTTGAGACCGAATCCGGGGTGAGGATCAAGACAGCTGTAGGGCGAGGAGGGTATGTGAGAGATGTGTACGTGAGGAGAATGGAAATGCACACTATGAAGTGGGCGTTTAAAATGAGTGGGGATTATGGGTCACATGCTGATGAGGGTTATGACAAGAATGCGTTTCCTGAGATCAAAGGGATTTATTATAGGGATGTGGTGGCTGATAATGTGACGATGGCTGCGAGGCTGGAGGGCATTGAAGGGCATCCGTTTACGGGGATTTGCATGTCGAATGTGACAGTTGTATTGGCTGCTAAGGCGAAGAAGCAGCCGTGGAGCTGTTCTGATGTTAAGGGGGTCGCTAGTGGCGTGACGCCGATGCCGTGTGATTTGCTACAGGGTGATGTTGTTAATGGGGGGTGTGATTTTCCTGTGGATGTGGTACCAATTGACACGGTGGAGATGAAAAGATGTAGTTTTGATGGTAGGATGAAGTCGCCTATTTCATCTCCTAGTACTTCTAGAGTCCTGCAAGCCCGTCTGGAGCACCTGCGCCATTGCATACTGAAAGCAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_28 Pectate_lyase_3

Protein Analysis

503

Amino Acids

54.68

Weight (kDa)

6.19

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pect-lyase_RHGA_epim	PF12708	50 - 98	5.9e-10	Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28	PF00295	145 - 430	5.5e-39	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61490 AT3G61490 AT3G61490 AT3G61490 AT3G61490
fragaria_vesca	FvH4_3g12401 FvH4_7g15040
malus_domestica	MD00G1112000.v1.1 MD01G1069000.v1.1
prunus_persica	Prupe.2G175100_v2.0.a1 Prupe.2G175100_v2.0.a1
pyrus_communis	pycom01g09850
rosa_chinensis	RchiOBHm_Chr1g0357161 RchiOBHm_Chr5g0020281
rosa_laevigata	RLG00000028048
rosa_multiflora	Rmu_sc0005967.1_g000009 Rmu_sc0006896.1_g000016 Rmu_sc0023664.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299030
rosa_rugosa	Rorug01G0254400 Rorug05G0058300
rosa_samantha	Rh1AG268700 Rh1BG236400 Rh1DG263500 Rh5BG148200 Rh5CG159700 Rh5DG147100
rosa_wichuraiana	Rw1G023710 Rw5G013160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	614
AarI	CACCTGC	1 cut(s)	1488
AatII	GACGTC	1 cut(s)	468
Acc36I	ACCTGC	1 cut(s)	1488
Acc65I	GGTACC	1 cut(s)	1372
AccB1I	GGYRCC	2 cut(s)	488, 1372
AccBSI	CCGCTC	1 cut(s)	795
AccIII	TCCGGA	1 cut(s)	908
AciI	CCGC	4 cut(s)	249, 785, 795, 882
AclWI	GGATC	1 cut(s)	980
AcoI	YGGCCR	4 cut(s)	270, 371, 499, 945
AcyI	GRCGYC	2 cut(s)	465, 1304
AfaI	GTAC	9 cut(s)	72, 119, 281, 548, 636, 809, 1016, 1374, 1447
AfiI	CCNNNNNNNGG	7 cut(s)	85, 369, 398, 568, 963, 969, 1205
AgsI	TTSAA	4 cut(s)	209, 298, 920, 1190
AhlI	ACTAGT	2 cut(s)	661, 841
AjnI	CCWGG	1 cut(s)	84
Alw21I	GWGCWC	4 cut(s)	33, 142, 698, 1479
Alw26I	GTCTC	4 cut(s)	171, 474, 769, 947
AlwI	GGATC	1 cut(s)	980
Aor13HI	TCCGGA	1 cut(s)	908
AoxI	GGCC	5 cut(s)	201, 270, 371, 499, 945
ApeKI	GCWGC	7 cut(s)	132, 212, 291, 651, 1169, 1241, 1258
Asp700I	GAANNNNTTC	1 cut(s)	524
Asp718I	GGTACC	1 cut(s)	1372
AspLEI	GCGC	3 cut(s)	170, 254, 1485
AspS9I	GGNCC	1 cut(s)	802
AsuC2I	CCSGG	3 cut(s)	274, 722, 964
AvaII	GGWCC	1 cut(s)	802
BalI	TGGCCA	1 cut(s)	373
BanI	GGYRCC	2 cut(s)	488, 1372
BanII	GRGCYC	2 cut(s)	142, 698
BbsI	GAAGAC	2 cut(s)	859, 942
Bbv12I	GWGCWC	4 cut(s)	33, 142, 698, 1479
BbvI	GCAGC	7 cut(s)	119, 199, 303, 663, 1156, 1228, 1270
BccI	CCATC	7 cut(s)	134, 500, 631, 686, 704, 1159, 1406
BceAI	ACGGC	8 cut(s)	196, 415, 502, 514, 826, 932, 1246, 1297
BcgI	CGANNNNNNTGC	2 cut(s)	104, 138
BciT130I	CCWGG	1 cut(s)	86
BclI	TGATCA	1 cut(s)	846
BcnI	CCSGG	3 cut(s)	274, 722, 964
BcoDI	GTCTC	4 cut(s)	171, 474, 769, 947
BcuI	ACTAGT	2 cut(s)	661, 841
BfaI	CTAG	5 cut(s)	662, 842, 1293, 1443, 1452
BfmI	CTRYAG	3 cut(s)	133, 984, 1325
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	1488
BlpI	GCTNAGC	1 cut(s)	255
BmcAI	AGTACT	2 cut(s)	281, 1447
Bme1390I	CCNGG	4 cut(s)	86, 274, 722, 964
Bme18I	GGWCC	1 cut(s)	802
BmgT120I	GGNCC	1 cut(s)	802
BmiI	GGNNCC	4 cut(s)	451, 490, 803, 1374
BmrFI	CCNGG	4 cut(s)	86, 274, 722, 964
BmsI	GCATC	2 cut(s)	1204, 1299
BpiI	GAAGAC	2 cut(s)	859, 942
BpmI	CTGGAG	2 cut(s)	1199, 1493
Bpu10I	CCTNAGC	2 cut(s)	227, 1245
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	339
BpuMI	CCSGG	3 cut(s)	274, 722, 964
BsaAI	YACGTR	1 cut(s)	1018
BsaHI	GRCGYC	2 cut(s)	465, 1304
BsaI	GGTCTC	1 cut(s)	947
BsaJI	CCNNGG	5 cut(s)	84, 244, 502, 963, 1262
BsaWI	WCCGGW	3 cut(s)	476, 688, 908
BsaXI	ACNNNNNCTCC	2 cut(s)	987, 1017
Bsc4I	CCNNNNNNNGG	7 cut(s)	85, 369, 398, 568, 963, 969, 1205
Bse118I	RCCGGY	1 cut(s)	287
Bse1I	ACTGG	3 cut(s)	232, 374, 805
Bse3DI	GCAATG	2 cut(s)	885, 1486
BseAI	TCCGGA	1 cut(s)	908
BseBI	CCWGG	1 cut(s)	86
BseDI	CCNNGG	5 cut(s)	84, 244, 502, 963, 1262
BseGI	GGATG	5 cut(s)	637, 1147, 1195, 1372, 1425
BseLI	CCNNNNNNNGG	7 cut(s)	85, 369, 398, 568, 963, 969, 1205
BseMI	GCAATG	2 cut(s)	885, 1486
BseMII	CTCAG	5 cut(s)	218, 252, 269, 780, 1107
BseNI	ACTGG	3 cut(s)	232, 374, 805
BseRI	GAGGAG	4 cut(s)	335, 571, 1008, 1036
BseX3I	CGGCCG	1 cut(s)	270
BseXI	GCAGC	7 cut(s)	119, 199, 303, 663, 1156, 1228, 1270
BseYI	CCCAGC	1 cut(s)	798
Bsh1285I	CGRYCG	1 cut(s)	273
BshFI	GGCC	5 cut(s)	203, 272, 373, 501, 947
BshNI	GGYRCC	2 cut(s)	488, 1372
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	4 cut(s)	33, 142, 698, 1479
BsiSI	CCGG	8 cut(s)	269, 273, 288, 477, 689, 722, 909, 963
BslFI	GGGAC	2 cut(s)	425, 815
BslI	CCNNNNNNNGG	7 cut(s)	85, 369, 398, 568, 963, 969, 1205
BsmAI	GTCTC	4 cut(s)	171, 474, 769, 947
BsmBI	CGTCTC	1 cut(s)	171
BsmFI	GGGAC	2 cut(s)	425, 815
BsmI	GAATGC	1 cut(s)	1111
BsnI	GGCC	5 cut(s)	203, 272, 373, 501, 947
Bso31I	GGTCTC	1 cut(s)	947
Bsp1286I	GDGCHC	4 cut(s)	33, 142, 698, 1479
Bsp13I	TCCGGA	1 cut(s)	908
Bsp1407I	TGTACA	1 cut(s)	634
Bsp143I	GATC	3 cut(s)	846, 972, 1119
Bsp1720I	GCTNAGC	1 cut(s)	255
BspACI	CCGC	4 cut(s)	249, 785, 795, 882
BspANI	GGCC	5 cut(s)	203, 272, 373, 501, 947
BspCNI	CTCAG	5 cut(s)	219, 251, 268, 779, 1108
BspEI	TCCGGA	1 cut(s)	908
BspLI	GGNNCC	4 cut(s)	451, 490, 803, 1374
BspMAI	CTGCAG	1 cut(s)	137
BspMI	ACCTGC	1 cut(s)	1488
BspPI	GGATC	1 cut(s)	980
BspQI	GCTCTTC	1 cut(s)	785
BspT107I	GGYRCC	2 cut(s)	488, 1372
BspTNI	GGTCTC	1 cut(s)	947
BsrBI	CCGCTC	1 cut(s)	795
BsrDI	GCAATG	2 cut(s)	885, 1486
BsrFI	RCCGGY	1 cut(s)	287
BsrGI	TGTACA	1 cut(s)	634
BsrI	ACTGG	3 cut(s)	232, 374, 805
BssAI	RCCGGY	1 cut(s)	287
BssECI	CCNNGG	5 cut(s)	84, 244, 502, 963, 1262
BssMI	GATC	3 cut(s)	846, 972, 1119
BssNI	GRCGYC	2 cut(s)	465, 1304
BssT1I	CCWWGG	2 cut(s)	244, 502
Bst2UI	CCWGG	1 cut(s)	86
Bst4CI	ACNGT	5 cut(s)	546, 779, 878, 1231, 1387
Bst6I	CTCTTC	1 cut(s)	785
BstACI	GRCGYC	2 cut(s)	465, 1304
BstAUI	TGTACA	1 cut(s)	634
BstBAI	YACGTR	1 cut(s)	1018
BstC8I	GCNNGC	2 cut(s)	436, 1464
BstDEI	CTNAG	7 cut(s)	227, 238, 255, 682, 766, 1116, 1245
BstDSI	CCRYGG	1 cut(s)	1262
BstENI	CCTNNNNNAGG	2 cut(s)	83, 566
BstF5I	GGATG	5 cut(s)	637, 1147, 1195, 1372, 1425
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	3 cut(s)	170, 254, 1485
BstKTI	GATC	3 cut(s)	849, 975, 1122
BstMAI	GTCTC	4 cut(s)	171, 474, 769, 947
BstMBI	GATC	3 cut(s)	846, 972, 1119
BstMCI	CGRYCG	1 cut(s)	273
BstMWI	GCNNNNNNNGC	5 cut(s)	209, 435, 835, 887, 1247
BstNI	CCWGG	1 cut(s)	86
BstNSI	RCATGY	2 cut(s)	1085, 1219
BstSCI	CCNGG	4 cut(s)	84, 272, 720, 962
BstSFI	CTRYAG	3 cut(s)	133, 984, 1325
BstV1I	GCAGC	7 cut(s)	119, 199, 303, 663, 1156, 1228, 1270
BstV2I	GAAGAC	2 cut(s)	859, 942
BstZI	CGGCCG	1 cut(s)	270
BsuRI	GGCC	5 cut(s)	203, 272, 373, 501, 947
BtgI	CCRYGG	1 cut(s)	1262
BtsCI	GGATG	5 cut(s)	637, 1147, 1195, 1372, 1425
BtsIMutI	CAGTG	1 cut(s)	883
BveI	ACCTGC	1 cut(s)	1488
Cac8I	GCNNGC	2 cut(s)	436, 1464
CfoI	GCGC	3 cut(s)	170, 254, 1485
Cfr10I	RCCGGY	1 cut(s)	287
Cfr13I	GGNCC	1 cut(s)	802
CseI	GACGC	3 cut(s)	422, 435, 1312
Csp6I	GTAC	9 cut(s)	71, 118, 280, 547, 635, 808, 1015, 1373, 1446
CviAII	CATG	5 cut(s)	574, 627, 729, 1082, 1216
CviQI	GTAC	9 cut(s)	71, 118, 280, 547, 635, 808, 1015, 1373, 1446
DdeI	CTNAG	7 cut(s)	227, 238, 255, 682, 766, 1116, 1245
DpnI	GATC	3 cut(s)	848, 974, 1121
DpnII	GATC	3 cut(s)	846, 972, 1119
DraI	TTTAAA	1 cut(s)	1057
EaeI	YGGCCR	4 cut(s)	270, 371, 499, 945
EagI	CGGCCG	1 cut(s)	270
Eam1104I	CTCTTC	1 cut(s)	785
EarI	CTCTTC	1 cut(s)	785
Ecl136II	GAGCTC	2 cut(s)	140, 696
EclXI	CGGCCG	1 cut(s)	270
Eco130I	CCWWGG	2 cut(s)	244, 502
Eco147I	AGGCCT	1 cut(s)	203
Eco24I	GRGCYC	2 cut(s)	142, 698
Eco31I	GGTCTC	1 cut(s)	947
Eco47I	GGWCC	1 cut(s)	802
Eco52I	CGGCCG	1 cut(s)	270
Eco53kI	GAGCTC	2 cut(s)	140, 696
EcoICRI	GAGCTC	2 cut(s)	140, 696
EcoNI	CCTNNNNNAGG	2 cut(s)	83, 566
EcoRII	CCWGG	1 cut(s)	84
EcoT14I	CCWWGG	2 cut(s)	244, 502
EcoT38I	GRGCYC	2 cut(s)	142, 698
ErhI	CCWWGG	2 cut(s)	244, 502
Esp3I	CGTCTC	1 cut(s)	171
FaeI	CATG	5 cut(s)	577, 630, 732, 1085, 1219
FalI	AAGNNNNNCTT	2 cut(s)	844, 876
FaqI	GGGAC	2 cut(s)	425, 815
FatI	CATG	5 cut(s)	573, 626, 728, 1081, 1215
FbaI	TGATCA	1 cut(s)	846
FokI	GGATG	5 cut(s)	624, 1154, 1182, 1379, 1432
FriOI	GRGCYC	2 cut(s)	142, 698
FspBI	CTAG	5 cut(s)	662, 842, 1293, 1443, 1452
GlaI	GCGC	3 cut(s)	169, 253, 1484
GsaI	CCCAGC	1 cut(s)	802
GsuI	CTGGAG	2 cut(s)	1199, 1493
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	5 cut(s)	203, 272, 373, 501, 947
HapII	CCGG	8 cut(s)	269, 273, 288, 477, 689, 722, 909, 963
HgaI	GACGC	3 cut(s)	422, 435, 1312
HhaI	GCGC	3 cut(s)	170, 254, 1485
Hin1I	GRCGYC	2 cut(s)	465, 1304
Hin1II	CATG	5 cut(s)	577, 630, 732, 1085, 1219
Hin6I	GCGC	3 cut(s)	168, 252, 1483
HinP1I	GCGC	3 cut(s)	168, 252, 1483
HincII	GTYRAC	1 cut(s)	718
HindII	GTYRAC	1 cut(s)	718
HinfI	GANTC	6 cut(s)	98, 104, 601, 725, 959, 1455
HpaI	GTTAAC	1 cut(s)	718
HpaII	CCGG	8 cut(s)	269, 273, 288, 477, 689, 722, 909, 963
Hpy166II	GTNNAC	4 cut(s)	549, 718, 1015, 1203
Hpy188I	TCNGA	5 cut(s)	97, 103, 449, 851, 1276
Hpy188III	TCNNGA	6 cut(s)	356, 909, 976, 1115, 1452, 1472
Hpy8I	GTNNAC	4 cut(s)	549, 718, 1015, 1203
Hpy99I	CGWCG	4 cut(s)	467, 470, 500, 776
HpyAV	CCTTC	5 cut(s)	121, 402, 402, 416, 1184
HpyCH4III	ACNGT	5 cut(s)	546, 779, 878, 1231, 1387
HpyCH4IV	ACGT	5 cut(s)	264, 465, 588, 1017, 1505
HpyF10VI	GCNNNNNNNGC	5 cut(s)	209, 435, 835, 887, 1247
HpyF3I	CTNAG	7 cut(s)	227, 238, 255, 682, 766, 1116, 1245
HpySE526I	ACGT	5 cut(s)	264, 465, 588, 1017, 1505
Hsp92I	GRCGYC	2 cut(s)	465, 1304
Hsp92II	CATG	5 cut(s)	577, 630, 732, 1085, 1219
HspAI	GCGC	3 cut(s)	168, 252, 1483
Kpn2I	TCCGGA	1 cut(s)	908
KpnI	GGTACC	1 cut(s)	1376
Ksp22I	TGATCA	1 cut(s)	846
KspAI	GTTAAC	1 cut(s)	718
Kzo9I	GATC	3 cut(s)	846, 972, 1119
LguI	GCTCTTC	1 cut(s)	785
LmnI	GCTCC	3 cut(s)	691, 1266, 1474
Lsp1109I	GCAGC	7 cut(s)	119, 199, 303, 663, 1156, 1228, 1270
LweI	GCATC	2 cut(s)	1204, 1299
MaeI	CTAG	5 cut(s)	662, 842, 1293, 1443, 1452
MaeII	ACGT	5 cut(s)	264, 465, 588, 1017, 1505
MaeIII	GTNAC	5 cut(s)	540, 1077, 1159, 1225, 1300
MalI	GATC	3 cut(s)	848, 974, 1121
MbiI	CCGCTC	1 cut(s)	795
MboI	GATC	3 cut(s)	846, 972, 1119
MboII	GAAGA	5 cut(s)	802, 864, 932, 947, 1264
MfeI	CAATTG	1 cut(s)	1377
MhlI	GDGCHC	4 cut(s)	33, 142, 698, 1479
MlsI	TGGCCA	1 cut(s)	373
MluCI	AATT	2 cut(s)	45, 1377
MluNI	TGGCCA	1 cut(s)	373
MlyI	GAGTC	1 cut(s)	1464
MmeI	TCCRAC	2 cut(s)	154, 609
Mox20I	TGGCCA	1 cut(s)	373
MroI	TCCGGA	1 cut(s)	908
MroXI	GAANNNNTTC	1 cut(s)	524
MscI	TGGCCA	1 cut(s)	373
MseI	TTAA	6 cut(s)	284, 717, 741, 1056, 1281, 1341
MslI	CAYNNNNRTG	1 cut(s)	1086
Msp20I	TGGCCA	1 cut(s)	373
MspA1I	CMGCKG	2 cut(s)	132, 983
MspI	CCGG	8 cut(s)	269, 273, 288, 477, 689, 722, 909, 963
MspR9I	CCNGG	4 cut(s)	86, 274, 722, 964
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	1 cut(s)	1111
MvaI	CCWGG	1 cut(s)	86
MwoI	GCNNNNNNNGC	5 cut(s)	209, 435, 835, 887, 1247
NciI	CCSGG	3 cut(s)	274, 722, 964
NdeII	GATC	3 cut(s)	846, 972, 1119
NlaIII	CATG	5 cut(s)	577, 630, 732, 1085, 1219
NlaIV	GGNNCC	4 cut(s)	451, 490, 803, 1374
NmuCI	GTSAC	4 cut(s)	1077, 1159, 1225, 1300
NspI	RCATGY	2 cut(s)	1085, 1219
PaqCI	CACCTGC	1 cut(s)	1488
PceI	AGGCCT	1 cut(s)	203
PciSI	GCTCTTC	1 cut(s)	785
PcsI	WCGNNNNNNNCGW	4 cut(s)	492, 1169, 1296, 1310
PctI	GAATGC	1 cut(s)	1111
PdmI	GAANNNNTTC	1 cut(s)	524
PfeI	GAWTC	5 cut(s)	98, 104, 601, 725, 959
PflFI	GACNNNGTC	1 cut(s)	467
PleI	GAGTC	1 cut(s)	1463
PpsI	GAGTC	1 cut(s)	1463
Ppu21I	YACGTR	1 cut(s)	1018
PsiI	TTATAA	1 cut(s)	614
Psp124BI	GAGCTC	2 cut(s)	142, 698
Psp6I	CCWGG	1 cut(s)	84
PspFI	CCCAGC	1 cut(s)	798
PspGI	CCWGG	1 cut(s)	84
PspN4I	GGNNCC	4 cut(s)	451, 490, 803, 1374
PspPI	GGNCC	1 cut(s)	802
PstI	CTGCAG	1 cut(s)	137
PsyI	GACNNNGTC	1 cut(s)	467
PvuII	CAGCTG	2 cut(s)	132, 983
RsaI	GTAC	9 cut(s)	72, 119, 281, 548, 636, 809, 1016, 1374, 1447
RsaNI	GTAC	9 cut(s)	71, 118, 280, 547, 635, 808, 1015, 1373, 1446
RseI	CAYNNNNRTG	1 cut(s)	1086
SacI	GAGCTC	2 cut(s)	142, 698
SapI	GCTCTTC	1 cut(s)	785
SaqAI	TTAA	6 cut(s)	284, 717, 741, 1056, 1281, 1341
Sau3AI	GATC	3 cut(s)	846, 972, 1119
Sau96I	GGNCC	1 cut(s)	802
ScaI	AGTACT	2 cut(s)	281, 1447
SchI	GAGTC	1 cut(s)	1464
ScrFI	CCNGG	4 cut(s)	86, 274, 722, 964
SduI	GDGCHC	4 cut(s)	33, 142, 698, 1479
SfaNI	GCATC	2 cut(s)	1204, 1299
SfcI	CTRYAG	3 cut(s)	133, 984, 1325
SinI	GGWCC	1 cut(s)	802
SmiMI	CAYNNNNRTG	1 cut(s)	1086
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SpeI	ACTAGT	2 cut(s)	661, 841
Sse9I	AATT	2 cut(s)	45, 1377
SseBI	AGGCCT	1 cut(s)	203
SsiI	CCGC	4 cut(s)	249, 785, 795, 882
SspMI	CTAG	5 cut(s)	662, 842, 1293, 1443, 1452
SstI	GAGCTC	2 cut(s)	142, 698
StuI	AGGCCT	1 cut(s)	203
StyD4I	CCNGG	4 cut(s)	84, 272, 720, 962
StyI	CCWWGG	2 cut(s)	244, 502
TaaI	ACNGT	5 cut(s)	546, 779, 878, 1231, 1387
TaiI	ACGT	5 cut(s)	267, 468, 591, 1020, 1508
TaqI	TCGA	4 cut(s)	114, 495, 599, 1220
TaqII	GACCGA	1 cut(s)	971
TasI	AATT	2 cut(s)	45, 1377
TatI	WGTACW	5 cut(s)	117, 279, 546, 634, 1445
TauI	GCSGC	3 cut(s)	252, 798, 884
TfiI	GAWTC	5 cut(s)	98, 104, 601, 725, 959
Tru1I	TTAA	6 cut(s)	284, 717, 741, 1056, 1281, 1341
Tru9I	TTAA	6 cut(s)	284, 717, 741, 1056, 1281, 1341
TscAI	CASTG	1 cut(s)	883
TseFI	GTSAC	4 cut(s)	1077, 1159, 1225, 1300
TseI	GCWGC	7 cut(s)	132, 212, 291, 651, 1169, 1241, 1258
Tsp45I	GTSAC	4 cut(s)	1077, 1159, 1225, 1300
TspDTI	ATGAA	6 cut(s)	17, 717, 1058, 1409, 1425, 1436
TspGWI	ACGGA	1 cut(s)	1188
TspRI	CASTG	1 cut(s)	883
Tth111I	GACNNNGTC	1 cut(s)	467
VpaK11BI	GGWCC	1 cut(s)	802
XagI	CCTNNNNNAGG	2 cut(s)	83, 566
XbaI	TCTAGA	1 cut(s)	1451
XceI	RCATGY	2 cut(s)	1085, 1219
XmnI	GAANNNNTTC	1 cut(s)	524
XspI	CTAG	5 cut(s)	662, 842, 1293, 1443, 1452
ZraI	GACGTC	1 cut(s)	466
ZrmI	AGTACT	2 cut(s)	281, 1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.