Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005074

Physical Location & Seq

Genomic Coordinates Forward (+)

11099528 .. 11103743

Gene Structure 4216 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g17430.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGCTGACGATGCGGCACAATTAGGTTCCCAACTAGCGGAAACAGCCTTAAACGAATCTGTCTCCGACCTGAAAGCTGAATTTTCTGACAGAGTTCCCATAAAGTCCATAATATCACGACCAGACGGGGGGTCTGCGTTTGCCGGGCAGAAGGTCCGGGTTGGTGGTTGGGTGAAGACGGGTCGGAAGGCAGACAAGGATGCATTTGCATTTCTGGAACTTAATGATGGATCATGTCCGGGCAACTTGCAGGTAATTGTGCAAGCAGATAAGGGCGACCTTGGCCAGCTTGTGCCAACTGGTACATGTGTGGTTGTGGAAGGCGAGCTTAAGCTGCCACCAGCTGGGGTCAAGCAGAAGGTGGAGCTTAGAGTTGAGGAGGTTCTCCATTTAGGTCCAGTTGACCCTCTTAAATATCCGCTGCACAAGGGCAAGATTTCCCTTGAGAGGTTGAGGGACGTTGTTCATCTGCGTCCCAGAACTAACACCATCTCTGCAGTTGCCCGCATCAGAGATGACCTGGCATATGCAACTCATACATTTTTTCGTAAGCATGGCTTCCGTTATGTGCACACTCCAATTATCACCACCAGTGATTGTGAGGGTGCTGGCGAGATGTTCCAAGTGACGACATTGATTAGTGAAGGTGAAAGGTTGGAGAGGGAACTGATTAAGAACCCACCCCCATCCGAAGCAGACGTGGAAGCTGCCAACTTAATTGTCACGGAAAAAGGAGATGCTGTTTCACAGCTGAAATCTGCTAAAGCAAGTAAGGATGAGATTGGTGCTGCTGTGGCTGAACTTAAAAGGGCGAAGGAGAACGTATTGAAGCTGCAGGAGAGAGCGAAGCTTCAGCCTGGAATCCCCAAAAAGGATGGGAAGGTTGACTACACTCAAGATTTCTTTGCCCGTCAAGCTTTTCTAACTGTTTCTGGGCAACTCCAAGTGGAATCTTATGCGTGTGCTATTAGTAGCGTGTATACATTTGGGCCTACTTTTCGAGCTGAGAATTCACATACTTCACGGCATTTGGCAGAATTCTGGATGGTGGAGCCTGAATTAGCATTTGCAGAGCTCAAGGATGACATGAACTGTGCAGAGGCATATGTAAAATTTTTGTGCAAGTGGTTACTTGACAACTGCTATGACGATATGGAGTTTTTTTCTCGGCAATATGATAAAACTTGCATAGAGCGTCTCAGAATGGTTGCATCCACACCGTTTGAACGGATTACATATACAGAAGCTGTGGAACTGCTCATTGATGCTGTGAAAAATGGCAAGAAGTTTGAGAATCCTGTGGAGTGGGGGATTGACTTGGCATCTGAACATGAAAGATTCTTAACAGAGGTGAAATTTCAGAAGCCTGTTATTGTGTACAACTACCCAAAAGGGATCAAAGCTTTCTACATGAGACTCAATGATGATAACAAGACAGTGGCTGCTATGGATGTTCTTGTACCAAAGGTGGGAGAATTGATAGGGGGTAGTCAAAGGGAAGAACGTTATGACGTTATTCATAGCAGGATTGCAGAGATGGATCTGCCTATTGAGCCATACGAGTGGTATCTTGACTTGCGGCGCTTTGGAACGGCCAAGCATTCCGGTTTTGGTTTAGGGTTTGAGCGGATGGTTTTGTTTGCTACTGGCATGGACAATATCAGAGATGTTATTCCATTCCCTAGATTTCCTGGAAGAGCAGATCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0007275 GO:0008150 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0010035 GO:0010038 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

WHEP-TRS tRNA-synt_2 tRNA_anti-codon

Protein Analysis

570

Amino Acids

63.77

Weight (kDa)

5.74

Isoelectric Point (pI)

29.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_anti-codon	PF01336	52 - 128	5.7e-09	OB-fold nucleic acid binding domain
tRNA-synt_2	PF00152	156 - 212	1e-05	tRNA synthetases class II (D, K and N)
WHEP-TRS	PF00458	241 - 275	1.2e-06	WHEP-TRS domain
tRNA-synt_2	PF00152	300 - 562	3.5e-50	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70980 AT5G56680
fragaria_vesca	FvH4_3g17430
malus_domestica	MD01G1115900.v1.1 MD03G1251800.v1.1 MD05G1158600.v1.1 MD11G1273000.v1.1
prunus_persica	Prupe.4G154500_v2.0.a1 Prupe.4G154500_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1
pyrus_communis	pycom03g19910 pycom05g15060 pycom11g24090
rosa_chinensis	RchiOBHm_Chr5g0028961
rosa_laevigata	RLG00000033131
rosa_multiflora	Rmu_co7984584.1_g000001 Rmu_sc0009042.1_g000005
rosa_roxburghii	Rroxscaffold_1G00050930
rosa_rugosa	Rorug05G0111900 Rorug05G0112000 Rorug05G0112000
rosa_samantha	Rh5AG204000 Rh5BG202300 Rh5CG223100 Rh5DG206100
rosa_wichuraiana	Rw5G018490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	241
AccB7I	CCANNNNNTGG	1 cut(s)	344
AccBSI	CCGCTC	1 cut(s)	1627
AccI	GTMKAC	1 cut(s)	980
AciI	CCGC	6 cut(s)	14, 38, 419, 505, 1579, 1627
AclI	AACGTT	1 cut(s)	1504
AclWI	GGATC	3 cut(s)	238, 1403, 1548
AcoI	YGGCCR	2 cut(s)	283, 1593
AcsI	RAATTY	5 cut(s)	80, 1009, 1037, 1112, 1355
AcuI	CTGAAG	1 cut(s)	836
AfaI	GTAC	3 cut(s)	304, 1379, 1461
AfiI	CCNNNNNNNGG	6 cut(s)	37, 128, 344, 447, 871, 1469
AflII	CTTAAG	1 cut(s)	329
AflIII	ACRYGT	1 cut(s)	305
AgsI	TTSAA	2 cut(s)	829, 1226
AhdI	GACNNNNNGTC	1 cut(s)	130
AjiI	CACGTC	1 cut(s)	700
AjnI	CCWGG	3 cut(s)	519, 856, 1690
Alw21I	GWGCWC	2 cut(s)	573, 1077
Alw26I	GTCTC	3 cut(s)	67, 1202, 1408
Alw44I	GTGCAC	1 cut(s)	569
AlwI	GGATC	3 cut(s)	238, 1403, 1548
AlwNI	CAGNNNCTG	2 cut(s)	1247, 1442
AoxI	GGCC	3 cut(s)	283, 989, 1593
ApaLI	GTGCAC	1 cut(s)	569
ApeKI	GCWGC	6 cut(s)	334, 421, 707, 788, 832, 1442
ApoI	RAATTY	5 cut(s)	80, 1009, 1037, 1112, 1355
AspLEI	GCGC	1 cut(s)	1584
AspS9I	GGNCC	3 cut(s)	154, 395, 989
AsuC2I	CCSGG	3 cut(s)	145, 158, 240
AsuHPI	GGTGA	4 cut(s)	184, 577, 659, 1363
AvaII	GGWCC	2 cut(s)	154, 395
BaeGI	GKGCMC	1 cut(s)	573
BaeI	ACNNNNGTAYC	2 cut(s)	294, 327
BalI	TGGCCA	1 cut(s)	285
BanII	GRGCYC	1 cut(s)	1077
BarI	GAAGNNNNNNTAC	2 cut(s)	872, 904
BbsI	GAAGAC	1 cut(s)	182
Bbv12I	GWGCWC	2 cut(s)	573, 1077
BbvI	GCAGC	6 cut(s)	321, 408, 694, 775, 819, 1429
BccI	CCATC	7 cut(s)	221, 497, 694, 869, 1039, 1531, 1624
BceAI	ACGGC	2 cut(s)	1040, 1608
BciT130I	CCWGG	3 cut(s)	521, 858, 1692
BcnI	CCSGG	3 cut(s)	145, 158, 240
BcoDI	GTCTC	3 cut(s)	67, 1202, 1408
BfaI	CTAG	2 cut(s)	35, 1683
BfmI	CTRYAG	2 cut(s)	495, 833
BfoI	RGCGCY	1 cut(s)	1585
BfrI	CTTAAG	1 cut(s)	329
BfuAI	ACCTGC	1 cut(s)	241
BglII	AGATCT	1 cut(s)	1702
BisI	GCNGC	8 cut(s)	15, 335, 422, 708, 789, 833, 1443, 1580
BlsI	GCNGC	8 cut(s)	16, 336, 423, 709, 790, 834, 1444, 1581
Bme1390I	CCNGG	6 cut(s)	145, 158, 240, 521, 858, 1692
Bme18I	GGWCC	2 cut(s)	154, 395
BmeRI	GACNNNNNGTC	1 cut(s)	130
BmgBI	CACGTC	1 cut(s)	700
BmgT120I	GGNCC	3 cut(s)	154, 395, 989
BmiI	GGNNCC	2 cut(s)	28, 1053
BmrFI	CCNGG	6 cut(s)	145, 158, 240, 521, 858, 1692
BmsI	GCATC	6 cut(s)	190, 516, 727, 1220, 1255, 1331
BpiI	GAAGAC	1 cut(s)	182
BpuEI	CTTGAG	3 cut(s)	464, 879, 1061
BpuMI	CCSGG	3 cut(s)	145, 158, 240
BsaJI	CCNNGG	1 cut(s)	280
BsaWI	WCCGGW	1 cut(s)	1604
BsaXI	ACNNNNNCTCC	2 cut(s)	726, 756
Bsc4I	CCNNNNNNNGG	6 cut(s)	37, 128, 344, 447, 871, 1469
Bse1I	ACTGG	4 cut(s)	304, 398, 591, 1651
BseBI	CCWGG	3 cut(s)	521, 858, 1692
BseDI	CCNNGG	1 cut(s)	280
BseGI	GGATG	9 cut(s)	205, 686, 781, 880, 1050, 1087, 1211, 1456, 1635
BseLI	CCNNNNNNNGG	6 cut(s)	37, 128, 344, 447, 871, 1469
BseMII	CTCAG	2 cut(s)	996, 1213
BseNI	ACTGG	4 cut(s)	304, 398, 591, 1651
BseRI	GAGGAG	1 cut(s)	392
BseSI	GKGCMC	1 cut(s)	573
BseXI	GCAGC	6 cut(s)	321, 408, 694, 775, 819, 1429
BseYI	CCCAGC	1 cut(s)	344
BsgI	GTGCAG	2 cut(s)	407, 1116
BshFI	GGCC	3 cut(s)	285, 991, 1595
BsiHKAI	GWGCWC	2 cut(s)	573, 1077
BsiSI	CCGG	4 cut(s)	144, 157, 239, 1605
BslFI	GGGAC	2 cut(s)	459, 470
BslI	CCNNNNNNNGG	6 cut(s)	37, 128, 344, 447, 871, 1469
BsmAI	GTCTC	3 cut(s)	67, 1202, 1408
BsmBI	CGTCTC	1 cut(s)	1202
BsmFI	GGGAC	2 cut(s)	459, 470
BsmI	GAATGC	1 cut(s)	1600
BsnI	GGCC	3 cut(s)	285, 991, 1595
Bsp1286I	GDGCHC	2 cut(s)	573, 1077
Bsp1407I	TGTACA	1 cut(s)	1377
Bsp143I	GATC	4 cut(s)	230, 1395, 1540, 1702
BspACI	CCGC	6 cut(s)	14, 38, 419, 505, 1579, 1627
BspANI	GGCC	3 cut(s)	285, 991, 1595
BspCNI	CTCAG	2 cut(s)	997, 1212
BspLI	GGNNCC	2 cut(s)	28, 1053
BspMAI	CTGCAG	2 cut(s)	499, 837
BspMI	ACCTGC	1 cut(s)	241
BspPI	GGATC	3 cut(s)	238, 1403, 1548
BspQI	GCTCTTC	1 cut(s)	1690
BspTI	CTTAAG	1 cut(s)	329
BsrBI	CCGCTC	1 cut(s)	1627
BsrGI	TGTACA	1 cut(s)	1377
BsrI	ACTGG	4 cut(s)	304, 398, 591, 1651
BssECI	CCNNGG	1 cut(s)	280
BssMI	GATC	4 cut(s)	230, 1395, 1540, 1702
BssNAI	GTATAC	1 cut(s)	981
BssT1I	CCWWGG	1 cut(s)	280
Bst1107I	GTATAC	1 cut(s)	981
Bst2UI	CCWGG	3 cut(s)	521, 858, 1692
Bst4CI	ACNGT	4 cut(s)	928, 1094, 1221, 1438
Bst6I	CTCTTC	1 cut(s)	1690
BstAFI	CTTAAG	1 cut(s)	329
BstAUI	TGTACA	1 cut(s)	1377
BstC8I	GCNNGC	5 cut(s)	264, 287, 326, 505, 610
BstDEI	CTNAG	3 cut(s)	368, 1005, 1199
BstF5I	GGATG	9 cut(s)	205, 686, 781, 880, 1050, 1087, 1211, 1456, 1635
BstH2I	RGCGCY	1 cut(s)	1585
BstHHI	GCGC	1 cut(s)	1584
BstKTI	GATC	4 cut(s)	233, 1398, 1543, 1705
BstMAI	GTCTC	3 cut(s)	67, 1202, 1408
BstMBI	GATC	4 cut(s)	230, 1395, 1540, 1702
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 44, 282, 334, 794, 914, 1552
BstNI	CCWGG	3 cut(s)	521, 858, 1692
BstNSI	RCATGY	1 cut(s)	309
BstSCI	CCNGG	6 cut(s)	143, 156, 238, 519, 856, 1690
BstSFI	CTRYAG	2 cut(s)	495, 833
BstSLI	GKGCMC	1 cut(s)	573
BstV1I	GCAGC	6 cut(s)	321, 408, 694, 775, 819, 1429
BstV2I	GAAGAC	1 cut(s)	182
BstX2I	RGATCY	2 cut(s)	1540, 1702
BstXI	CCANNNNNNTGG	1 cut(s)	1563
BstYI	RGATCY	2 cut(s)	1540, 1702
BstZ17I	GTATAC	1 cut(s)	981
BsuRI	GGCC	3 cut(s)	285, 991, 1595
BtrI	CACGTC	1 cut(s)	700
BtsCI	GGATG	9 cut(s)	205, 686, 781, 880, 1050, 1087, 1211, 1456, 1635
BtsIMutI	CAGTG	2 cut(s)	598, 1443
BveI	ACCTGC	1 cut(s)	241
Cac8I	GCNNGC	5 cut(s)	264, 287, 326, 505, 610
CaiI	CAGNNNCTG	2 cut(s)	1247, 1442
CfoI	GCGC	1 cut(s)	1584
Cfr13I	GGNCC	3 cut(s)	154, 395, 989
CseI	GACGC	2 cut(s)	461, 1184
Csp6I	GTAC	3 cut(s)	303, 1378, 1460
CspCI	CAANNNNNGTGG	2 cut(s)	1204, 1239
CviAII	CATG	7 cut(s)	234, 306, 554, 1087, 1331, 1411, 1651
CviQI	GTAC	3 cut(s)	303, 1378, 1460
DdeI	CTNAG	3 cut(s)	368, 1005, 1199
DpnI	GATC	4 cut(s)	232, 1397, 1542, 1704
DpnII	GATC	4 cut(s)	230, 1395, 1540, 1702
DriI	GACNNNNNGTC	1 cut(s)	130
EaeI	YGGCCR	2 cut(s)	283, 1593
Eam1104I	CTCTTC	1 cut(s)	1690
Eam1105I	GACNNNNNGTC	1 cut(s)	130
EarI	CTCTTC	1 cut(s)	1690
Ecl136II	GAGCTC	1 cut(s)	1075
Eco130I	CCWWGG	1 cut(s)	280
Eco24I	GRGCYC	1 cut(s)	1077
Eco47I	GGWCC	2 cut(s)	154, 395
Eco53kI	GAGCTC	1 cut(s)	1075
Eco57I	CTGAAG	1 cut(s)	836
EcoICRI	GAGCTC	1 cut(s)	1075
EcoRI	GAATTC	2 cut(s)	1009, 1037
EcoRII	CCWGG	3 cut(s)	519, 856, 1690
EcoT14I	CCWWGG	1 cut(s)	280
EcoT22I	ATGCAT	1 cut(s)	205
EcoT38I	GRGCYC	1 cut(s)	1077
ErhI	CCWWGG	1 cut(s)	280
Esp3I	CGTCTC	1 cut(s)	1202
FaeI	CATG	7 cut(s)	237, 309, 557, 1090, 1334, 1414, 1654
FalI	AAGNNNNNCTT	4 cut(s)	312, 344, 542, 574
FaqI	GGGAC	2 cut(s)	459, 470
FatI	CATG	7 cut(s)	233, 305, 553, 1086, 1330, 1410, 1650
FauI	CCCGC	1 cut(s)	512
FauNDI	CATATG	2 cut(s)	526, 1105
FblI	GTMKAC	1 cut(s)	980
Fnu4HI	GCNGC	8 cut(s)	15, 335, 422, 708, 789, 833, 1443, 1580
FokI	GGATG	9 cut(s)	212, 673, 788, 887, 1057, 1094, 1198, 1463, 1642
FriOI	GRGCYC	1 cut(s)	1077
Fsp4HI	GCNGC	8 cut(s)	15, 335, 422, 708, 789, 833, 1443, 1580
FspBI	CTAG	2 cut(s)	35, 1683
GlaI	GCGC	1 cut(s)	1583
GluI	GCNGC	8 cut(s)	15, 335, 422, 708, 789, 833, 1443, 1580
GsaI	CCCAGC	1 cut(s)	348
HaeII	RGCGCY	1 cut(s)	1585
HaeIII	GGCC	3 cut(s)	285, 991, 1595
HapII	CCGG	4 cut(s)	144, 157, 239, 1605
HgaI	GACGC	2 cut(s)	461, 1184
HhaI	GCGC	1 cut(s)	1584
Hin1II	CATG	7 cut(s)	237, 309, 557, 1090, 1334, 1414, 1654
Hin6I	GCGC	1 cut(s)	1582
HinP1I	GCGC	1 cut(s)	1582
HincII	GTYRAC	2 cut(s)	403, 886
HindII	GTYRAC	2 cut(s)	403, 886
HindIII	AAGCTT	3 cut(s)	848, 915, 1401
HinfI	GANTC	6 cut(s)	56, 861, 950, 1294, 1338, 1416
HpaII	CCGG	4 cut(s)	144, 157, 239, 1605
HphI	GGTGA	4 cut(s)	184, 577, 659, 1363
Hpy166II	GTNNAC	5 cut(s)	403, 571, 886, 981, 1378
Hpy188I	TCNGA	9 cut(s)	67, 88, 186, 512, 691, 1202, 1327, 1362, 1664
Hpy188III	TCNNGA	5 cut(s)	117, 215, 896, 1042, 1571
Hpy8I	GTNNAC	5 cut(s)	403, 571, 886, 981, 1378
HpyAV	CCTTC	7 cut(s)	145, 181, 314, 352, 638, 808, 874
HpyCH4III	ACNGT	4 cut(s)	928, 1094, 1221, 1438
HpyCH4IV	ACGT	5 cut(s)	459, 699, 822, 1504, 1512
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 44, 282, 334, 794, 914, 1552
HpyF3I	CTNAG	3 cut(s)	368, 1005, 1199
HpySE526I	ACGT	5 cut(s)	459, 699, 822, 1504, 1512
Hsp92II	CATG	7 cut(s)	237, 309, 557, 1090, 1334, 1414, 1654
HspAI	GCGC	1 cut(s)	1582
Kzo9I	GATC	4 cut(s)	230, 1395, 1540, 1702
LguI	GCTCTTC	1 cut(s)	1690
LmnI	GCTCC	2 cut(s)	364, 1051
Lsp1109I	GCAGC	6 cut(s)	321, 408, 694, 775, 819, 1429
LweI	GCATC	6 cut(s)	190, 516, 727, 1220, 1255, 1331
MaeI	CTAG	2 cut(s)	35, 1683
MaeII	ACGT	5 cut(s)	459, 699, 822, 1504, 1512
MaeIII	GTNAC	3 cut(s)	625, 721, 1128
MalI	GATC	4 cut(s)	232, 1397, 1542, 1704
MbiI	CCGCTC	1 cut(s)	1627
MboI	GATC	4 cut(s)	230, 1395, 1540, 1702
MboII	GAAGA	3 cut(s)	187, 1511, 1707
MflI	RGATCY	2 cut(s)	1540, 1702
MhlI	GDGCHC	2 cut(s)	573, 1077
MlsI	TGGCCA	1 cut(s)	285
MluNI	TGGCCA	1 cut(s)	285
MlyI	GAGTC	1 cut(s)	1410
MmeI	TCCRAC	3 cut(s)	90, 164, 636
MnlI	CCTC	9 cut(s)	370, 373, 417, 441, 447, 595, 654, 1093, 1342
Mox20I	TGGCCA	1 cut(s)	285
Mph1103I	ATGCAT	1 cut(s)	205
MscI	TGGCCA	1 cut(s)	285
MseI	TTAA	9 cut(s)	50, 222, 330, 411, 672, 716, 804, 1343, 1708
MslI	CAYNNNNRTG	1 cut(s)	1561
Msp20I	TGGCCA	1 cut(s)	285
MspA1I	CMGCKG	3 cut(s)	344, 421, 751
MspCI	CTTAAG	1 cut(s)	329
MspI	CCGG	4 cut(s)	144, 157, 239, 1605
MspR9I	CCNGG	6 cut(s)	145, 158, 240, 521, 858, 1692
Mva1269I	GAATGC	1 cut(s)	1600
MvaI	CCWGG	3 cut(s)	521, 858, 1692
MwoI	GCNNNNNNNGC	7 cut(s)	11, 44, 282, 334, 794, 914, 1552
NciI	CCSGG	3 cut(s)	145, 158, 240
NdeI	CATATG	2 cut(s)	526, 1105
NdeII	GATC	4 cut(s)	230, 1395, 1540, 1702
NlaIII	CATG	7 cut(s)	237, 309, 557, 1090, 1334, 1414, 1654
NlaIV	GGNNCC	2 cut(s)	28, 1053
NmeAIII	GCCGAG	1 cut(s)	1147
NmuCI	GTSAC	2 cut(s)	625, 721
NsiI	ATGCAT	1 cut(s)	205
NspI	RCATGY	1 cut(s)	309
PciI	ACATGT	1 cut(s)	305
PciSI	GCTCTTC	1 cut(s)	1690
PctI	GAATGC	1 cut(s)	1600
PfeI	GAWTC	5 cut(s)	56, 861, 950, 1294, 1338
PflMI	CCANNNNNTGG	1 cut(s)	344
PfoI	TCCNGGA	1 cut(s)	1690
PkrI	GCNGC	8 cut(s)	16, 336, 423, 709, 790, 834, 1444, 1581
PleI	GAGTC	1 cut(s)	1410
PpsI	GAGTC	1 cut(s)	1410
PscI	ACATGT	1 cut(s)	305
Psp124BI	GAGCTC	1 cut(s)	1077
Psp1406I	AACGTT	1 cut(s)	1504
Psp6I	CCWGG	3 cut(s)	519, 856, 1690
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	3 cut(s)	519, 856, 1690
PspN4I	GGNNCC	2 cut(s)	28, 1053
PspPI	GGNCC	3 cut(s)	154, 395, 989
PstI	CTGCAG	2 cut(s)	499, 837
PstNI	CAGNNNCTG	2 cut(s)	1247, 1442
PsuI	RGATCY	2 cut(s)	1540, 1702
PvuII	CAGCTG	2 cut(s)	344, 751
RsaI	GTAC	3 cut(s)	304, 1379, 1461
RsaNI	GTAC	3 cut(s)	303, 1378, 1460
RseI	CAYNNNNRTG	1 cut(s)	1561
SacI	GAGCTC	1 cut(s)	1077
SapI	GCTCTTC	1 cut(s)	1690
SaqAI	TTAA	9 cut(s)	50, 222, 330, 411, 672, 716, 804, 1343, 1708
SatI	GCNGC	8 cut(s)	15, 335, 422, 708, 789, 833, 1443, 1580
Sau3AI	GATC	4 cut(s)	230, 1395, 1540, 1702
Sau96I	GGNCC	3 cut(s)	154, 395, 989
SchI	GAGTC	1 cut(s)	1410
ScrFI	CCNGG	6 cut(s)	145, 158, 240, 521, 858, 1692
SduI	GDGCHC	2 cut(s)	573, 1077
SfaNI	GCATC	6 cut(s)	190, 516, 727, 1220, 1255, 1331
SfcI	CTRYAG	2 cut(s)	495, 833
SinI	GGWCC	2 cut(s)	154, 395
SmiMI	CAYNNNNRTG	1 cut(s)	1561
SmlI	CTYRAG	4 cut(s)	329, 443, 894, 1076
SmoI	CTYRAG	4 cut(s)	329, 443, 894, 1076
SsiI	CCGC	6 cut(s)	14, 38, 419, 505, 1579, 1627
SspMI	CTAG	2 cut(s)	35, 1683
SstI	GAGCTC	1 cut(s)	1077
StyD4I	CCNGG	6 cut(s)	143, 156, 238, 519, 856, 1690
StyI	CCWWGG	1 cut(s)	280
TaaI	ACNGT	4 cut(s)	928, 1094, 1221, 1438
TaiI	ACGT	5 cut(s)	462, 702, 825, 1507, 1515
TaqI	TCGA	1 cut(s)	1000
TatI	WGTACW	1 cut(s)	1377
TauI	GCSGC	2 cut(s)	17, 1582
TfiI	GAWTC	5 cut(s)	56, 861, 950, 1294, 1338
Tru1I	TTAA	9 cut(s)	50, 222, 330, 411, 672, 716, 804, 1343, 1708
Tru9I	TTAA	9 cut(s)	50, 222, 330, 411, 672, 716, 804, 1343, 1708
TscAI	CASTG	2 cut(s)	598, 1443
TseFI	GTSAC	2 cut(s)	625, 721
TseI	GCWGC	6 cut(s)	334, 421, 707, 788, 832, 1442
Tsp45I	GTSAC	2 cut(s)	625, 721
TspDTI	ATGAA	4 cut(s)	455, 1103, 1347, 1508
TspGWI	ACGGA	3 cut(s)	551, 740, 1243
TspRI	CASTG	2 cut(s)	598, 1443
Van91I	CCANNNNNTGG	1 cut(s)	344
Vha464I	CTTAAG	1 cut(s)	329
VneI	GTGCAC	1 cut(s)	569
VpaK11BI	GGWCC	2 cut(s)	154, 395
XapI	RAATTY	5 cut(s)	80, 1009, 1037, 1112, 1355
XceI	RCATGY	1 cut(s)	309
XmiI	GTMKAC	1 cut(s)	980
XspI	CTAG	2 cut(s)	35, 1683
Zsp2I	ATGCAT	1 cut(s)	205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.