asparagine--tRNA ligase, cytoplasmic 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G70980 AT5G56680 |
| fragaria_vesca | FvH4_3g17430 |
| malus_domestica | MD01G1115900.v1.1 MD03G1251800.v1.1 MD05G1158600.v1.1 MD11G1273000.v1.1 |
| prunus_persica | Prupe.4G154500_v2.0.a1 Prupe.4G154500_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 Prupe.7G068600_v2.0.a1 |
| pyrus_communis | pycom03g19910 pycom05g15060 pycom11g24090 |
| rosa_chinensis | RchiOBHm_Chr5g0028961 |
| rosa_laevigata | RLG00000033131 |
| rosa_multiflora | Rmu_co7984584.1_g000001 Rmu_sc0009042.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00050930 |
| rosa_rugosa | Rorug05G0111900 Rorug05G0112000 Rorug05G0112000 |
| rosa_samantha | Rh5AG204000 Rh5BG202300 Rh5CG223100 Rh5DG206100 |
| rosa_wichuraiana | Rw5G018490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1371 |
| Acc16I | TGCGCA | 1 cut(s) | 21 |
| Acc65I | GGTACC | 2 cut(s) | 1450, 1557 |
| AccB1I | GGYRCC | 2 cut(s) | 1450, 1557 |
| AciI | CCGC | 1 cut(s) | 1570 |
| AclWI | GGATC | 4 cut(s) | 370, 663, 828, 1394 |
| AcoI | YGGCCR | 3 cut(s) | 27, 898, 925 |
| AcsI | RAATTY | 2 cut(s) | 1028, 1148 |
| AcuI | CTGAAG | 1 cut(s) | 224 |
| AfaI | GTAC | 5 cut(s) | 295, 407, 964, 1452, 1559 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 119, 335, 336, 423, 862, 1218, 1460 |
| AflII | CTTAAG | 1 cut(s) | 320 |
| AgsI | TTSAA | 7 cut(s) | 62, 614, 695, 797, 845, 1422, 1616 |
| AjnI | CCWGG | 6 cut(s) | 204, 422, 510, 847, 1446, 1681 |
| AlwI | GGATC | 4 cut(s) | 370, 663, 828, 1394 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1433 |
| Ama87I | CYCGRG | 2 cut(s) | 147, 229 |
| AoxI | GGCC | 5 cut(s) | 27, 180, 898, 925, 980 |
| ApeKI | GCWGC | 5 cut(s) | 277, 698, 779, 1246, 1433 |
| ApoI | RAATTY | 2 cut(s) | 1028, 1148 |
| AseI | ATTAAT | 1 cut(s) | 630 |
| Asp718I | GGTACC | 2 cut(s) | 1450, 1557 |
| AspLEI | GCGC | 3 cut(s) | 22, 70, 1575 |
| AspS9I | GGNCC | 2 cut(s) | 123, 980 |
| AsuC2I | CCSGG | 5 cut(s) | 127, 136, 148, 149, 1639 |
| AsuHPI | GGTGA | 6 cut(s) | 175, 278, 385, 568, 614, 1354 |
| AsuNHI | GCTAGC | 1 cut(s) | 142 |
| AvaI | CYCGRG | 2 cut(s) | 147, 229 |
| AvaII | GGWCC | 1 cut(s) | 123 |
| BalI | TGGCCA | 2 cut(s) | 29, 927 |
| BanI | GGYRCC | 2 cut(s) | 1450, 1557 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 863, 895 |
| BauI | CACGAG | 1 cut(s) | 815 |
| BbsI | GAAGAC | 1 cut(s) | 173 |
| BbvI | GCAGC | 5 cut(s) | 289, 685, 766, 1233, 1420 |
| BccI | CCATC | 9 cut(s) | 107, 110, 212, 305, 329, 685, 860, 1030, 1522 |
| BceAI | ACGGC | 1 cut(s) | 885 |
| BcgI | CGANNNNNNTGC | 5 cut(s) | 33, 173, 207, 929, 963 |
| BciT130I | CCWGG | 6 cut(s) | 206, 424, 512, 849, 1448, 1683 |
| BciVI | GTATCC | 1 cut(s) | 863 |
| BcnI | CCSGG | 5 cut(s) | 127, 136, 148, 149, 1639 |
| BfaI | CTAG | 1 cut(s) | 143 |
| BfmI | CTRYAG | 1 cut(s) | 486 |
| BfoI | RGCGCY | 1 cut(s) | 1576 |
| BfrI | CTTAAG | 1 cut(s) | 320 |
| BfuI | GTATCC | 1 cut(s) | 863 |
| BglII | AGATCT | 1 cut(s) | 1693 |
| BisI | GCNGC | 6 cut(s) | 278, 699, 780, 1247, 1434, 1571 |
| BlpI | GCTNAGC | 1 cut(s) | 738 |
| BlsI | GCNGC | 6 cut(s) | 279, 700, 781, 1248, 1435, 1572 |
| BmcAI | AGTACT | 1 cut(s) | 964 |
| Bme18I | GGWCC | 1 cut(s) | 123 |
| BmeT110I | CYCGRG | 2 cut(s) | 147, 229 |
| BmgT120I | GGNCC | 2 cut(s) | 123, 980 |
| BmiI | GGNNCC | 5 cut(s) | 124, 428, 1044, 1452, 1559 |
| BmsI | GCATC | 3 cut(s) | 181, 496, 1322 |
| BmtI | GCTAGC | 1 cut(s) | 146 |
| BpiI | GAAGAC | 1 cut(s) | 173 |
| BpmI | CTGGAG | 2 cut(s) | 227, 845 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 738 |
| BpuEI | CTTGAG | 4 cut(s) | 455, 728, 1088, 1562 |
| BpuMI | CCSGG | 5 cut(s) | 127, 136, 148, 149, 1639 |
| BsaAI | YACGTR | 1 cut(s) | 559 |
| BsaJI | CCNNGG | 4 cut(s) | 147, 271, 510, 714 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 119, 335, 336, 423, 862, 1218, 1460 |
| Bse1I | ACTGG | 5 cut(s) | 30, 175, 295, 582, 828 |
| BseBI | CCWGG | 6 cut(s) | 206, 424, 512, 849, 1448, 1683 |
| BseDI | CCNNGG | 4 cut(s) | 147, 271, 510, 714 |
| BseGI | GGATG | 6 cut(s) | 196, 316, 871, 1041, 1078, 1447 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 119, 335, 336, 423, 862, 1218, 1460 |
| BseMII | CTCAG | 4 cut(s) | 752, 987, 1245, 1308 |
| BseNI | ACTGG | 5 cut(s) | 30, 175, 295, 582, 828 |
| BseRI | GAGGAG | 3 cut(s) | 663, 842, 1538 |
| BseXI | GCAGC | 5 cut(s) | 289, 685, 766, 1233, 1420 |
| BsgI | GTGCAG | 2 cut(s) | 581, 1107 |
| BshFI | GGCC | 5 cut(s) | 29, 182, 900, 927, 982 |
| BshNI | GGYRCC | 2 cut(s) | 1450, 1557 |
| BsiHKCI | CYCGRG | 2 cut(s) | 147, 229 |
| BsiSI | CCGG | 4 cut(s) | 126, 135, 148, 1638 |
| BslFI | GGGAC | 3 cut(s) | 71, 461, 1594 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 119, 335, 336, 423, 862, 1218, 1460 |
| BsmFI | GGGAC | 3 cut(s) | 71, 461, 1594 |
| BsmI | GAATGC | 2 cut(s) | 200, 1394 |
| BsnI | GGCC | 5 cut(s) | 29, 182, 900, 927, 982 |
| BsoBI | CYCGRG | 2 cut(s) | 147, 229 |
| Bsp143I | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 738 |
| BspACI | CCGC | 1 cut(s) | 1570 |
| BspANI | GGCC | 5 cut(s) | 29, 182, 900, 927, 982 |
| BspCNI | CTCAG | 4 cut(s) | 751, 988, 1246, 1309 |
| BspLI | GGNNCC | 5 cut(s) | 124, 428, 1044, 1452, 1559 |
| BspMAI | CTGCAG | 1 cut(s) | 490 |
| BspOI | GCTAGC | 1 cut(s) | 146 |
| BspPI | GGATC | 4 cut(s) | 370, 663, 828, 1394 |
| BspQI | GCTCTTC | 2 cut(s) | 1485, 1681 |
| BspT107I | GGYRCC | 2 cut(s) | 1450, 1557 |
| BspTI | CTTAAG | 1 cut(s) | 320 |
| BsrI | ACTGG | 5 cut(s) | 30, 175, 295, 582, 828 |
| BssECI | CCNNGG | 4 cut(s) | 147, 271, 510, 714 |
| BssMI | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| BssSI | CACGAG | 1 cut(s) | 815 |
| BssT1I | CCWWGG | 2 cut(s) | 271, 714 |
| Bst2BI | CACGAG | 1 cut(s) | 815 |
| Bst2UI | CCWGG | 6 cut(s) | 206, 424, 512, 849, 1448, 1683 |
| Bst4CI | ACNGT | 5 cut(s) | 919, 967, 1085, 1429, 1585 |
| Bst6I | CTCTTC | 2 cut(s) | 1485, 1681 |
| BstAFI | CTTAAG | 1 cut(s) | 320 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 283 |
| BstBAI | YACGTR | 1 cut(s) | 559 |
| BstC8I | GCNNGC | 2 cut(s) | 144, 317 |
| BstDEI | CTNAG | 7 cut(s) | 40, 494, 738, 959, 996, 1254, 1317 |
| BstEII | GGTNACC | 1 cut(s) | 266 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 117 |
| BstF5I | GGATG | 6 cut(s) | 196, 316, 871, 1041, 1078, 1447 |
| BstH2I | RGCGCY | 1 cut(s) | 1576 |
| BstHHI | GCGC | 3 cut(s) | 22, 70, 1575 |
| BstKTI | GATC | 7 cut(s) | 378, 544, 658, 836, 1186, 1389, 1696 |
| BstMBI | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 26, 283, 1543 |
| BstNI | CCWGG | 6 cut(s) | 206, 424, 512, 849, 1448, 1683 |
| BstNSI | RCATGY | 1 cut(s) | 954 |
| BstPI | GGTNACC | 1 cut(s) | 266 |
| BstSFI | CTRYAG | 1 cut(s) | 486 |
| BstV1I | GCAGC | 5 cut(s) | 289, 685, 766, 1233, 1420 |
| BstV2I | GAAGAC | 1 cut(s) | 173 |
| BstX2I | RGATCY | 3 cut(s) | 655, 833, 1693 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 545, 1554 |
| BstYI | RGATCY | 3 cut(s) | 655, 833, 1693 |
| BsuI | GTATCC | 1 cut(s) | 863 |
| BsuRI | GGCC | 5 cut(s) | 29, 182, 900, 927, 982 |
| BtsCI | GGATG | 6 cut(s) | 196, 316, 871, 1041, 1078, 1447 |
| BtsI | GCAGTG | 1 cut(s) | 1245 |
| BtsIMutI | CAGTG | 3 cut(s) | 589, 1245, 1434 |
| Cac8I | GCNNGC | 2 cut(s) | 144, 317 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1433 |
| CfoI | GCGC | 3 cut(s) | 22, 70, 1575 |
| Cfr13I | GGNCC | 2 cut(s) | 123, 980 |
| Cfr9I | CCCGGG | 1 cut(s) | 147 |
| CseI | GACGC | 1 cut(s) | 98 |
| CsiI | ACCWGGT | 1 cut(s) | 847 |
| Csp6I | GTAC | 5 cut(s) | 294, 406, 963, 1451, 1558 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1410, 1445 |
| CviAII | CATG | 7 cut(s) | 225, 380, 545, 951, 1289, 1322, 1402 |
| CviQI | GTAC | 5 cut(s) | 294, 406, 963, 1451, 1558 |
| DdeI | CTNAG | 7 cut(s) | 40, 494, 738, 959, 996, 1254, 1317 |
| DpnI | GATC | 7 cut(s) | 377, 543, 657, 835, 1185, 1388, 1695 |
| DpnII | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| EaeI | YGGCCR | 3 cut(s) | 27, 898, 925 |
| Eam1104I | CTCTTC | 2 cut(s) | 1485, 1681 |
| EarI | CTCTTC | 2 cut(s) | 1485, 1681 |
| Eco130I | CCWWGG | 2 cut(s) | 271, 714 |
| Eco32I | GATATC | 1 cut(s) | 1679 |
| Eco47I | GGWCC | 1 cut(s) | 123 |
| Eco57I | CTGAAG | 1 cut(s) | 224 |
| Eco88I | CYCGRG | 2 cut(s) | 147, 229 |
| Eco91I | GGTNACC | 1 cut(s) | 266 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 117 |
| EcoO65I | GGTNACC | 1 cut(s) | 266 |
| EcoRI | GAATTC | 1 cut(s) | 1028 |
| EcoRII | CCWGG | 6 cut(s) | 204, 422, 510, 847, 1446, 1681 |
| EcoRV | GATATC | 1 cut(s) | 1679 |
| EcoT14I | CCWWGG | 2 cut(s) | 271, 714 |
| EcoT22I | ATGCAT | 2 cut(s) | 196, 952 |
| ErhI | CCWWGG | 2 cut(s) | 271, 714 |
| FaeI | CATG | 7 cut(s) | 228, 383, 548, 954, 1292, 1325, 1405 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 395, 427 |
| FaqI | GGGAC | 3 cut(s) | 71, 461, 1594 |
| FatI | CATG | 7 cut(s) | 224, 379, 544, 950, 1288, 1321, 1401 |
| FauNDI | CATATG | 2 cut(s) | 517, 1549 |
| Fnu4HI | GCNGC | 6 cut(s) | 278, 699, 780, 1247, 1434, 1571 |
| FokI | GGATG | 6 cut(s) | 203, 323, 878, 1048, 1085, 1454 |
| Fsp4HI | GCNGC | 6 cut(s) | 278, 699, 780, 1247, 1434, 1571 |
| FspBI | CTAG | 1 cut(s) | 143 |
| FspI | TGCGCA | 1 cut(s) | 21 |
| GlaI | GCGC | 3 cut(s) | 21, 69, 1574 |
| GluI | GCNGC | 6 cut(s) | 278, 699, 780, 1247, 1434, 1571 |
| GsuI | CTGGAG | 2 cut(s) | 227, 845 |
| HaeII | RGCGCY | 1 cut(s) | 1576 |
| HaeIII | GGCC | 5 cut(s) | 29, 182, 900, 927, 982 |
| HapII | CCGG | 4 cut(s) | 126, 135, 148, 1638 |
| HgaI | GACGC | 1 cut(s) | 98 |
| HhaI | GCGC | 3 cut(s) | 22, 70, 1575 |
| Hin1II | CATG | 7 cut(s) | 228, 383, 548, 954, 1292, 1325, 1405 |
| Hin6I | GCGC | 3 cut(s) | 20, 68, 1573 |
| HinP1I | GCGC | 3 cut(s) | 20, 68, 1573 |
| HincII | GTYRAC | 1 cut(s) | 394 |
| HindII | GTYRAC | 1 cut(s) | 394 |
| HindIII | AAGCTT | 4 cut(s) | 298, 323, 704, 839 |
| HinfI | GANTC | 5 cut(s) | 84, 498, 565, 941, 1418 |
| HpaII | CCGG | 4 cut(s) | 126, 135, 148, 1638 |
| HphI | GGTGA | 6 cut(s) | 175, 278, 385, 568, 614, 1354 |
| Hpy166II | GTNNAC | 1 cut(s) | 394 |
| Hpy188I | TCNGA | 6 cut(s) | 177, 503, 682, 1221, 1318, 1353 |
| Hpy188III | TCNNGA | 5 cut(s) | 113, 367, 468, 817, 1033 |
| Hpy8I | GTNNAC | 1 cut(s) | 394 |
| HpyAV | CCTTC | 4 cut(s) | 172, 248, 343, 364 |
| HpyCH4III | ACNGT | 5 cut(s) | 919, 967, 1085, 1429, 1585 |
| HpyCH4IV | ACGT | 2 cut(s) | 463, 558 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 26, 283, 1543 |
| HpyF3I | CTNAG | 7 cut(s) | 40, 494, 738, 959, 996, 1254, 1317 |
| HpySE526I | ACGT | 2 cut(s) | 463, 558 |
| Hsp92II | CATG | 7 cut(s) | 228, 383, 548, 954, 1292, 1325, 1405 |
| HspAI | GCGC | 3 cut(s) | 20, 68, 1573 |
| KpnI | GGTACC | 2 cut(s) | 1454, 1561 |
| Kzo9I | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| LguI | GCTCTTC | 2 cut(s) | 1485, 1681 |
| LmnI | GCTCC | 5 cut(s) | 208, 355, 432, 1042, 1243 |
| Lsp1109I | GCAGC | 5 cut(s) | 289, 685, 766, 1233, 1420 |
| LweI | GCATC | 3 cut(s) | 181, 496, 1322 |
| MabI | ACCWGGT | 1 cut(s) | 847 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MaeII | ACGT | 2 cut(s) | 463, 558 |
| MaeIII | GTNAC | 5 cut(s) | 266, 554, 616, 1119, 1496 |
| MalI | GATC | 7 cut(s) | 377, 543, 657, 835, 1185, 1388, 1695 |
| MboI | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| MboII | GAAGA | 5 cut(s) | 178, 883, 1151, 1502, 1698 |
| MfeI | CAATTG | 1 cut(s) | 1129 |
| MflI | RGATCY | 3 cut(s) | 655, 833, 1693 |
| MlsI | TGGCCA | 2 cut(s) | 29, 927 |
| MluCI | AATT | 8 cut(s) | 71, 570, 771, 1028, 1129, 1148, 1164, 1372 |
| MluNI | TGGCCA | 2 cut(s) | 29, 927 |
| MlyI | GAGTC | 2 cut(s) | 93, 559 |
| MmeI | TCCRAC | 2 cut(s) | 155, 627 |
| Mox20I | TGGCCA | 2 cut(s) | 29, 927 |
| Mph1103I | ATGCAT | 2 cut(s) | 196, 952 |
| MscI | TGGCCA | 2 cut(s) | 29, 927 |
| MseI | TTAA | 3 cut(s) | 93, 321, 630 |
| MslI | CAYNNNNRTG | 2 cut(s) | 543, 1552 |
| Msp20I | TGGCCA | 2 cut(s) | 29, 927 |
| MspCI | CTTAAG | 1 cut(s) | 320 |
| MspI | CCGG | 4 cut(s) | 126, 135, 148, 1638 |
| MunI | CAATTG | 1 cut(s) | 1129 |
| Mva1269I | GAATGC | 2 cut(s) | 200, 1394 |
| MvaI | CCWGG | 6 cut(s) | 206, 424, 512, 849, 1448, 1683 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 26, 283, 1543 |
| NciI | CCSGG | 5 cut(s) | 127, 136, 148, 149, 1639 |
| NdeI | CATATG | 2 cut(s) | 517, 1549 |
| NdeII | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| NheI | GCTAGC | 1 cut(s) | 142 |
| NlaIII | CATG | 7 cut(s) | 228, 383, 548, 954, 1292, 1325, 1405 |
| NlaIV | GGNNCC | 5 cut(s) | 124, 428, 1044, 1452, 1559 |
| NmuCI | GTSAC | 2 cut(s) | 266, 616 |
| NsbI | TGCGCA | 1 cut(s) | 21 |
| NsiI | ATGCAT | 2 cut(s) | 196, 952 |
| NspI | RCATGY | 1 cut(s) | 954 |
| PciSI | GCTCTTC | 2 cut(s) | 1485, 1681 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 312 |
| PctI | GAATGC | 2 cut(s) | 200, 1394 |
| PfeI | GAWTC | 3 cut(s) | 498, 941, 1418 |
| PfoI | TCCNGGA | 2 cut(s) | 204, 1681 |
| PkrI | GCNGC | 6 cut(s) | 279, 700, 781, 1248, 1435, 1572 |
| PleI | GAGTC | 2 cut(s) | 92, 559 |
| PpsI | GAGTC | 2 cut(s) | 92, 559 |
| Ppu21I | YACGTR | 1 cut(s) | 559 |
| PshBI | ATTAAT | 1 cut(s) | 630 |
| PsiI | TTATAA | 1 cut(s) | 1371 |
| Psp6I | CCWGG | 6 cut(s) | 204, 422, 510, 847, 1446, 1681 |
| PspEI | GGTNACC | 1 cut(s) | 266 |
| PspGI | CCWGG | 6 cut(s) | 204, 422, 510, 847, 1446, 1681 |
| PspN4I | GGNNCC | 5 cut(s) | 124, 428, 1044, 1452, 1559 |
| PspPI | GGNCC | 2 cut(s) | 123, 980 |
| PstI | CTGCAG | 1 cut(s) | 490 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1433 |
| PsuI | RGATCY | 3 cut(s) | 655, 833, 1693 |
| RsaI | GTAC | 5 cut(s) | 295, 407, 964, 1452, 1559 |
| RsaNI | GTAC | 5 cut(s) | 294, 406, 963, 1451, 1558 |
| RseI | CAYNNNNRTG | 2 cut(s) | 543, 1552 |
| SapI | GCTCTTC | 2 cut(s) | 1485, 1681 |
| SaqAI | TTAA | 3 cut(s) | 93, 321, 630 |
| SatI | GCNGC | 6 cut(s) | 278, 699, 780, 1247, 1434, 1571 |
| Sau3AI | GATC | 7 cut(s) | 375, 541, 655, 833, 1183, 1386, 1693 |
| Sau96I | GGNCC | 2 cut(s) | 123, 980 |
| ScaI | AGTACT | 1 cut(s) | 964 |
| SchI | GAGTC | 2 cut(s) | 93, 559 |
| SexAI | ACCWGGT | 1 cut(s) | 847 |
| SfaNI | GCATC | 3 cut(s) | 181, 496, 1322 |
| SfcI | CTRYAG | 1 cut(s) | 486 |
| SinI | GGWCC | 1 cut(s) | 123 |
| SmaI | CCCGGG | 1 cut(s) | 149 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 543, 1552 |
| SmlI | CTYRAG | 5 cut(s) | 320, 434, 743, 1067, 1541 |
| SmoI | CTYRAG | 5 cut(s) | 320, 434, 743, 1067, 1541 |
| Sse9I | AATT | 8 cut(s) | 71, 570, 771, 1028, 1129, 1148, 1164, 1372 |
| SsiI | CCGC | 1 cut(s) | 1570 |
| SspI | AATATT | 1 cut(s) | 1651 |
| SspMI | CTAG | 1 cut(s) | 143 |
| StyI | CCWWGG | 2 cut(s) | 271, 714 |
| TaaI | ACNGT | 5 cut(s) | 919, 967, 1085, 1429, 1585 |
| TaiI | ACGT | 2 cut(s) | 466, 561 |
| TaqI | TCGA | 5 cut(s) | 366, 859, 939, 991, 1013 |
| TasI | AATT | 8 cut(s) | 71, 570, 771, 1028, 1129, 1148, 1164, 1372 |
| TatI | WGTACW | 1 cut(s) | 962 |
| TauI | GCSGC | 1 cut(s) | 1573 |
| TfiI | GAWTC | 3 cut(s) | 498, 941, 1418 |
| Tru1I | TTAA | 3 cut(s) | 93, 321, 630 |
| Tru9I | TTAA | 3 cut(s) | 93, 321, 630 |
| TscAI | CASTG | 3 cut(s) | 589, 1245, 1434 |
| TseFI | GTSAC | 2 cut(s) | 266, 616 |
| TseI | GCWGC | 5 cut(s) | 277, 698, 779, 1246, 1433 |
| Tsp45I | GTSAC | 2 cut(s) | 266, 616 |
| TspDTI | ATGAA | 4 cut(s) | 446, 648, 1094, 1338 |
| TspGWI | ACGGA | 2 cut(s) | 46, 1352 |
| TspMI | CCCGGG | 1 cut(s) | 147 |
| TspRI | CASTG | 3 cut(s) | 589, 1245, 1434 |
| Vha464I | CTTAAG | 1 cut(s) | 320 |
| VpaK11BI | GGWCC | 1 cut(s) | 123 |
| VspI | ATTAAT | 1 cut(s) | 630 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 117 |
| XapI | RAATTY | 2 cut(s) | 1028, 1148 |
| XceI | RCATGY | 1 cut(s) | 954 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 893 |
| XmaI | CCCGGG | 1 cut(s) | 147 |
| XspI | CTAG | 1 cut(s) | 143 |
| ZrmI | AGTACT | 1 cut(s) | 964 |
| Zsp2I | ATGCAT | 2 cut(s) | 196, 952 |