Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005127

Physical Location & Seq

Genomic Coordinates Reverse (-)

15519173 .. 15523513

Gene Structure 4341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g22510.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGAAACAACCAAGCTGTTTTTACCACTTTTGTTGTTAATCTCGGTGGCCTTGACAGTCATCGCAGGTGAGTATGTCCGGCCTCCGCCACGCAAAGACCTCCAATTCCCATGGGACCCGAAACCCTCTTCCCAACCCCAACAGGTGCACATCTCTTTGGCAGGAGACAAGCACATGCGAGTGACGTGGGTCACAAGTGATAAATCTGCTCCTTCAATTGTTGAATATGGAACATCATCAGGGAAATACAGCTCCGTAGCTCAAGGAGAAAGCACTTCGTATAGTTATATGATTTATAAGTCTGGACTGATACACCACACTGTCATTGGTCCTCTTGAACATGATACAGTTTACTTCTACAAATGTGGAGGACAAGGTCCTGAGTTTCAGCTCAAGACCCCTGCAGCTCAATTCCCAATTACTTTTGCTGTGGCAGGAGATCTTGGTCAAACTGAATGGACAAAGTCAACCCTAGATCACATCGACCAGTGCAAGTATGATGTGCATCTCCTTCCTGGAGACCTTTCATATGCTGATTATGTGCAGTCTCGGTGGGATACTTTTGGCAAGCTGGTACAGCCACTTGCAAGTGCAAGGCCATGGATGGTAACACAGGGAAACCATGAAAAGGAGAGCATACCATTCTTTAAGGATGGGTTTGTATCCTATAATTCTAGGTGGAAAATGCCGTCTAAAGAGAGCGGATCAAGCTCAAATCTTTATTACTCCTTCGAAGTTGCAGGTGCTCATATTATCATGCTTGGCTCGTATACTGATTATGATGAATATTCAGATCAATACAGGTGGTTAAAGGCTGATCTTTCAAGGGTAGACCGACAAAAAACCCCTTGGTTGCTTGTGCTATTTCATGTTCCCTGGTATAATAGTAACAAGGCTCATCAAGGTGAAGGGGACAGCATGATGTCAGCAATGGAGCCATTACTTTATGCTGCTAGTGCTGATATAGTGTTTTCTGGTCATGTTCATGCTTATGAACGCTCGAAACGTGTTAACAGTGGAAAATCAGATCCATGCGGTGCAGTCCACATTACTATTGGTGATGGAGGAAATAGAGAAGGTTTAGCTCAAAGGTATGTGCACCCATCACCTGAGTGGTCAGTTTTCCGGGAAGCAAGTTTTGGTCATGGTGAGCTAAAGATAGTCAATTCAACCCATGCCTTTTGGACCTGGCATAGGAATGACGATGATGAGCCTGTAAGGTCTGATCAGGTCTGGATGACCTCCTTGGTCAGTTCAGTATGCATTGCTGAAAAGAGACATGAGCTGAGGAAGATACTCATGTCACCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

437

Amino Acids

49.23

Weight (kDa)

6.34

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pur_ac_phosph_N	PF16656	46 - 133	2.4e-21	Purple acid Phosphatase, N-terminal domain
Metallophos	PF00149	141 - 331	9.3e-19	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20500
fragaria_vesca	FvH4_3g22510 FvH4_3g22510 FvH4_3g22510 FvH4_3g22510
malus_domestica	MD03G1203900.v1.1 MD11G1220800.v1.1
prunus_persica	Prupe.4G211500_v2.0.a1 Prupe.4G211500_v2.0.a1
pyrus_communis	pycom03g15460 pycom11g19470
rosa_chinensis	RchiOBHm_Chr3g0493801 RchiOBHm_Chr5g0039161
rosa_laevigata	RLG00000033899
rosa_multiflora	Rmu_sc0000533.1_g000006 Rmu_sc0002235.1_g000065
rosa_roxburghii	Rroxscaffold_1G00040430 Rroxscaffold_1G00041930 Rroxscaffold_1G00041940
rosa_rugosa	Rorug05G0177100
rosa_samantha	Rh5AG263600 Rh5AG263900 Rh5BG268500 Rh5BG268800 Rh5CG301400 Rh5CG301800 Rh5DG276300 Rh5DG276500
rosa_wichuraiana	Rw5G024650 Rw5G024680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	297
AarI	CACCTGC	2 cut(s)	56, 731
Acc36I	ACCTGC	2 cut(s)	56, 731
AccBSI	CCGCTC	1 cut(s)	702
AccI	GTMKAC	2 cut(s)	770, 831
AciI	CCGC	3 cut(s)	86, 702, 1035
AclWI	GGATC	2 cut(s)	712, 1022
AfaI	GTAC	1 cut(s)	576
AfiI	CCNNNNNNNGG	2 cut(s)	628, 1194
AflIII	ACRYGT	1 cut(s)	1006
AgsI	TTSAA	5 cut(s)	216, 224, 338, 825, 1170
AjiI	CACGTC	1 cut(s)	186
AjnI	CCWGG	3 cut(s)	514, 875, 1187
AjuI	GAANNNNNNNTTGG	2 cut(s)	1122, 1154
AleI	CACNNNNGTG	1 cut(s)	1111
Alw21I	GWGCWC	3 cut(s)	150, 748, 1101
Alw26I	GTCTC	4 cut(s)	159, 513, 552, 1270
Alw44I	GTGCAC	2 cut(s)	146, 1097
AlwI	GGATC	2 cut(s)	712, 1022
AoxI	GGCC	3 cut(s)	48, 80, 596
ApaLI	GTGCAC	2 cut(s)	146, 1097
ApeKI	GCWGC	2 cut(s)	404, 950
AspS9I	GGNCC	4 cut(s)	115, 329, 377, 1185
AsuC2I	CCSGG	1 cut(s)	1127
AsuHPI	GGTGA	6 cut(s)	80, 917, 1070, 1098, 1160, 1296
AsuII	TTCGAA	1 cut(s)	732
AvaII	GGWCC	4 cut(s)	115, 329, 377, 1185
BaeGI	GKGCMC	2 cut(s)	150, 1101
BaeI	ACNNNNGTAYC	1 cut(s)	1286
Bbv12I	GWGCWC	3 cut(s)	150, 748, 1101
BbvCI	CCTCAGC	1 cut(s)	1286
BbvI	GCAGC	2 cut(s)	416, 937
BccI	CCATC	4 cut(s)	598, 647, 1055, 1111
BceAI	ACGGC	1 cut(s)	673
BciT130I	CCWGG	3 cut(s)	516, 877, 1189
BciVI	GTATCC	2 cut(s)	550, 673
BclI	TGATCA	1 cut(s)	1225
BcnI	CCSGG	1 cut(s)	1127
BcoDI	GTCTC	4 cut(s)	159, 513, 552, 1270
BfaI	CTAG	3 cut(s)	473, 675, 954
BfmI	CTRYAG	1 cut(s)	402
BfuAI	ACCTGC	2 cut(s)	56, 731
BfuI	GTATCC	2 cut(s)	550, 673
BglII	AGATCT	1 cut(s)	439
BisI	GCNGC	2 cut(s)	405, 951
BlsI	GCNGC	2 cut(s)	406, 952
Bme1390I	CCNGG	4 cut(s)	516, 877, 1127, 1189
Bme18I	GGWCC	4 cut(s)	115, 329, 377, 1185
BmgBI	CACGTC	1 cut(s)	186
BmgT120I	GGNCC	4 cut(s)	115, 329, 377, 1185
BmiI	GGNNCC	3 cut(s)	116, 117, 936
BmrFI	CCNGG	4 cut(s)	516, 877, 1127, 1189
BmsI	GCATC	1 cut(s)	514
BoxI	GACNNNNGTC	1 cut(s)	188
BpmI	CTGGAG	1 cut(s)	537
Bpu10I	CCTNAGC	1 cut(s)	1286
Bpu14I	TTCGAA	1 cut(s)	732
BpuEI	CTTGAG	2 cut(s)	246, 377
BpuMI	CCSGG	1 cut(s)	1127
BsaBI	GATNNNNATC	1 cut(s)	504
BsaI	GGTCTC	1 cut(s)	513
BsaJI	CCNNGG	5 cut(s)	110, 599, 848, 875, 1245
Bsc4I	CCNNNNNNNGG	2 cut(s)	628, 1194
Bse1I	ACTGG	1 cut(s)	487
Bse3DI	GCAATG	2 cut(s)	936, 1263
Bse8I	GATNNNNATC	1 cut(s)	504
BseBI	CCWGG	3 cut(s)	516, 877, 1189
BseDI	CCNNGG	5 cut(s)	110, 599, 848, 875, 1245
BseGI	GGATG	3 cut(s)	609, 658, 1242
BseJI	GATNNNNATC	1 cut(s)	504
BseLI	CCNNNNNNNGG	2 cut(s)	628, 1194
BseMI	GCAATG	2 cut(s)	936, 1263
BseMII	CTCAG	3 cut(s)	372, 1101, 1277
BseNI	ACTGG	1 cut(s)	487
BseSI	GKGCMC	2 cut(s)	150, 1101
BseXI	GCAGC	2 cut(s)	416, 937
BsgI	GTGCAG	2 cut(s)	563, 1059
BshFI	GGCC	3 cut(s)	50, 82, 598
BsiHKAI	GWGCWC	3 cut(s)	150, 748, 1101
BsiSI	CCGG	2 cut(s)	79, 1126
BslFI	GGGAC	2 cut(s)	128, 926
BslI	CCNNNNNNNGG	2 cut(s)	628, 1194
BsmAI	GTCTC	4 cut(s)	159, 513, 552, 1270
BsmFI	GGGAC	2 cut(s)	128, 926
BsnI	GGCC	3 cut(s)	50, 82, 598
Bso31I	GGTCTC	1 cut(s)	513
Bsp119I	TTCGAA	1 cut(s)	732
Bsp1286I	GDGCHC	3 cut(s)	150, 748, 1101
Bsp143I	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
Bsp19I	CCATGG	2 cut(s)	110, 599
BspACI	CCGC	3 cut(s)	86, 702, 1035
BspANI	GGCC	3 cut(s)	50, 82, 598
BspCNI	CTCAG	3 cut(s)	373, 1102, 1278
BspLI	GGNNCC	3 cut(s)	116, 117, 936
BspMAI	CTGCAG	1 cut(s)	406
BspMI	ACCTGC	2 cut(s)	56, 731
BspPI	GGATC	2 cut(s)	712, 1022
BspT104I	TTCGAA	1 cut(s)	732
BspTNI	GGTCTC	1 cut(s)	513
BsrBI	CCGCTC	1 cut(s)	702
BsrDI	GCAATG	2 cut(s)	936, 1263
BsrI	ACTGG	1 cut(s)	487
BssECI	CCNNGG	5 cut(s)	110, 599, 848, 875, 1245
BssMI	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
BssNAI	GTATAC	1 cut(s)	771
BssT1I	CCWWGG	4 cut(s)	110, 599, 848, 1245
Bst1107I	GTATAC	1 cut(s)	771
Bst2UI	CCWGG	3 cut(s)	516, 877, 1189
Bst4CI	ACNGT	4 cut(s)	58, 322, 349, 1016
Bst6I	CTCTTC	1 cut(s)	133
BstBI	TTCGAA	1 cut(s)	732
BstC8I	GCNNGC	1 cut(s)	569
BstDEI	CTNAG	3 cut(s)	381, 1110, 1286
BstDSI	CCRYGG	2 cut(s)	110, 599
BstENI	CCTNNNNNAGG	1 cut(s)	1192
BstF5I	GGATG	3 cut(s)	609, 658, 1242
BstKTI	GATC	7 cut(s)	442, 478, 707, 796, 820, 1030, 1228
BstMAI	GTCTC	4 cut(s)	159, 513, 552, 1270
BstMBI	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
BstMWI	GCNNNNNNNGC	3 cut(s)	577, 708, 956
BstNI	CCWGG	3 cut(s)	516, 877, 1189
BstNSI	RCATGY	1 cut(s)	178
BstPAI	GACNNNNGTC	1 cut(s)	188
BstSCI	CCNGG	4 cut(s)	514, 875, 1125, 1187
BstSFI	CTRYAG	1 cut(s)	402
BstSLI	GKGCMC	2 cut(s)	150, 1101
BstV1I	GCAGC	2 cut(s)	416, 937
BstX2I	RGATCY	2 cut(s)	439, 1027
BstYI	RGATCY	2 cut(s)	439, 1027
BstZ17I	GTATAC	1 cut(s)	771
BsuI	GTATCC	2 cut(s)	550, 673
BsuRI	GGCC	3 cut(s)	50, 82, 598
BtgI	CCRYGG	2 cut(s)	110, 599
BtgZI	GCGATG	1 cut(s)	46
BtrI	CACGTC	1 cut(s)	186
BtsCI	GGATG	3 cut(s)	609, 658, 1242
BtsIMutI	CAGTG	3 cut(s)	318, 494, 1021
BveI	ACCTGC	2 cut(s)	56, 731
Cac8I	GCNNGC	1 cut(s)	569
Cfr13I	GGNCC	4 cut(s)	115, 329, 377, 1185
Csp6I	GTAC	1 cut(s)	575
CspCI	CAANNNNNGTGG	4 cut(s)	15, 50, 785, 820
CviQI	GTAC	1 cut(s)	575
DdeI	CTNAG	3 cut(s)	381, 1110, 1286
DpnI	GATC	7 cut(s)	441, 477, 706, 795, 819, 1029, 1227
DpnII	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
Eam1104I	CTCTTC	1 cut(s)	133
EarI	CTCTTC	1 cut(s)	133
EciI	GGCGGA	1 cut(s)	75
Eco130I	CCWWGG	4 cut(s)	110, 599, 848, 1245
Eco31I	GGTCTC	1 cut(s)	513
Eco47I	GGWCC	4 cut(s)	115, 329, 377, 1185
EcoNI	CCTNNNNNAGG	1 cut(s)	1192
EcoO109I	RGGNCCY	2 cut(s)	115, 377
EcoRII	CCWGG	3 cut(s)	514, 875, 1187
EcoT14I	CCWWGG	4 cut(s)	110, 599, 848, 1245
EcoT22I	ATGCAT	1 cut(s)	1265
ErhI	CCWWGG	4 cut(s)	110, 599, 848, 1245
FaqI	GGGAC	2 cut(s)	128, 926
FauNDI	CATATG	1 cut(s)	529
FbaI	TGATCA	1 cut(s)	1225
FblI	GTMKAC	2 cut(s)	770, 831
Fnu4HI	GCNGC	2 cut(s)	405, 951
FokI	GGATG	3 cut(s)	616, 665, 1249
Fsp4HI	GCNGC	2 cut(s)	405, 951
FspBI	CTAG	3 cut(s)	473, 675, 954
GluI	GCNGC	2 cut(s)	405, 951
GsuI	CTGGAG	1 cut(s)	537
HaeIII	GGCC	3 cut(s)	50, 82, 598
HapII	CCGG	2 cut(s)	79, 1126
HincII	GTYRAC	2 cut(s)	468, 1012
HindII	GTYRAC	2 cut(s)	468, 1012
HpaI	GTTAAC	1 cut(s)	1012
HpaII	CCGG	2 cut(s)	79, 1126
HphI	GGTGA	6 cut(s)	80, 917, 1070, 1098, 1160, 1296
Hpy166II	GTNNAC	8 cut(s)	148, 352, 468, 771, 832, 1012, 1045, 1099
Hpy188I	TCNGA	3 cut(s)	793, 1027, 1225
Hpy188III	TCNNGA	5 cut(s)	303, 335, 380, 394, 1234
Hpy8I	GTNNAC	8 cut(s)	148, 352, 468, 771, 832, 1012, 1045, 1099
HpyAV	CCTTC	5 cut(s)	222, 521, 739, 902, 1070
HpyCH4III	ACNGT	4 cut(s)	58, 322, 349, 1016
HpyCH4IV	ACGT	2 cut(s)	185, 1006
HpyF10VI	GCNNNNNNNGC	3 cut(s)	577, 708, 956
HpyF3I	CTNAG	3 cut(s)	381, 1110, 1286
HpySE526I	ACGT	2 cut(s)	185, 1006
KflI	GGGWCCC	1 cut(s)	115
Ksp22I	TGATCA	1 cut(s)	1225
KspAI	GTTAAC	1 cut(s)	1012
Kzo9I	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
LmnI	GCTCC	3 cut(s)	214, 257, 934
Lsp1109I	GCAGC	2 cut(s)	416, 937
LweI	GCATC	1 cut(s)	514
MaeI	CTAG	3 cut(s)	473, 675, 954
MaeII	ACGT	2 cut(s)	185, 1006
MaeIII	GTNAC	5 cut(s)	181, 190, 607, 887, 1302
MalI	GATC	7 cut(s)	441, 477, 706, 795, 819, 1029, 1227
MbiI	CCGCTC	1 cut(s)	702
MboI	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
MboII	GAAGA	2 cut(s)	120, 1303
MfeI	CAATTG	1 cut(s)	216
MflI	RGATCY	2 cut(s)	439, 1027
MhlI	GDGCHC	3 cut(s)	150, 748, 1101
MluCI	AATT	6 cut(s)	104, 216, 410, 417, 670, 1165
MnlI	CCTC	8 cut(s)	93, 110, 136, 342, 362, 1058, 1252, 1281
Mph1103I	ATGCAT	1 cut(s)	1265
MseI	TTAA	4 cut(s)	38, 648, 809, 1011
MslI	CAYNNNNRTG	6 cut(s)	179, 903, 984, 990, 1111, 1197
MspI	CCGG	2 cut(s)	79, 1126
MspR9I	CCNGG	4 cut(s)	516, 877, 1127, 1189
MunI	CAATTG	1 cut(s)	216
MvaI	CCWGG	3 cut(s)	516, 877, 1189
MwoI	GCNNNNNNNGC	3 cut(s)	577, 708, 956
NciI	CCSGG	1 cut(s)	1127
NcoI	CCATGG	2 cut(s)	110, 599
NdeI	CATATG	1 cut(s)	529
NdeII	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
NlaIV	GGNNCC	3 cut(s)	116, 117, 936
NmuCI	GTSAC	3 cut(s)	181, 190, 1302
NsiI	ATGCAT	1 cut(s)	1265
NspI	RCATGY	1 cut(s)	178
NspV	TTCGAA	1 cut(s)	732
OliI	CACNNNNGTG	1 cut(s)	1111
PaqCI	CACCTGC	2 cut(s)	56, 731
PcsI	WCGNNNNNNNCGW	1 cut(s)	1003
PflFI	GACNNNGTC	2 cut(s)	375, 463
PfoI	TCCNGGA	2 cut(s)	514, 1125
PkrI	GCNGC	2 cut(s)	406, 952
PpuMI	RGGWCCY	2 cut(s)	115, 377
PshAI	GACNNNNGTC	1 cut(s)	188
PsiI	TTATAA	1 cut(s)	297
Psp5II	RGGWCCY	2 cut(s)	115, 377
Psp6I	CCWGG	3 cut(s)	514, 875, 1187
PspGI	CCWGG	3 cut(s)	514, 875, 1187
PspN4I	GGNNCC	3 cut(s)	116, 117, 936
PspPI	GGNCC	4 cut(s)	115, 329, 377, 1185
PspPPI	RGGWCCY	2 cut(s)	115, 377
PstI	CTGCAG	1 cut(s)	406
PsuI	RGATCY	2 cut(s)	439, 1027
PsyI	GACNNNGTC	2 cut(s)	375, 463
RsaI	GTAC	1 cut(s)	576
RsaNI	GTAC	1 cut(s)	575
RseI	CAYNNNNRTG	6 cut(s)	179, 903, 984, 990, 1111, 1197
SaqAI	TTAA	4 cut(s)	38, 648, 809, 1011
SatI	GCNGC	2 cut(s)	405, 951
Sau3AI	GATC	7 cut(s)	439, 475, 704, 793, 817, 1027, 1225
Sau96I	GGNCC	4 cut(s)	115, 329, 377, 1185
ScrFI	CCNGG	4 cut(s)	516, 877, 1127, 1189
SduI	GDGCHC	3 cut(s)	150, 748, 1101
SfaNI	GCATC	1 cut(s)	514
SfcI	CTRYAG	1 cut(s)	402
SfuI	TTCGAA	1 cut(s)	732
SinI	GGWCC	4 cut(s)	115, 329, 377, 1185
SmiMI	CAYNNNNRTG	6 cut(s)	179, 903, 984, 990, 1111, 1197
SmlI	CTYRAG	2 cut(s)	261, 392
SmoI	CTYRAG	2 cut(s)	261, 392
Sse9I	AATT	6 cut(s)	104, 216, 410, 417, 670, 1165
SsiI	CCGC	3 cut(s)	86, 702, 1035
SspI	AATATT	1 cut(s)	788
SspMI	CTAG	3 cut(s)	473, 675, 954
StyD4I	CCNGG	4 cut(s)	514, 875, 1125, 1187
StyI	CCWWGG	4 cut(s)	110, 599, 848, 1245
TaaI	ACNGT	4 cut(s)	58, 322, 349, 1016
TaiI	ACGT	2 cut(s)	188, 1009
TaqI	TCGA	3 cut(s)	483, 732, 1001
TaqII	GACCGA	1 cut(s)	849
TasI	AATT	6 cut(s)	104, 216, 410, 417, 670, 1165
Tru1I	TTAA	4 cut(s)	38, 648, 809, 1011
Tru9I	TTAA	4 cut(s)	38, 648, 809, 1011
TscAI	CASTG	3 cut(s)	325, 494, 1021
TseFI	GTSAC	3 cut(s)	181, 190, 1302
TseI	GCWGC	2 cut(s)	404, 950
Tsp45I	GTSAC	3 cut(s)	181, 190, 1302
TspDTI	ATGAA	6 cut(s)	516, 639, 798, 857, 974, 1008
TspGWI	ACGGA	1 cut(s)	244
TspRI	CASTG	3 cut(s)	325, 494, 1021
Tth111I	GACNNNGTC	2 cut(s)	375, 463
VneI	GTGCAC	2 cut(s)	146, 1097
VpaK11BI	GGWCC	4 cut(s)	115, 329, 377, 1185
XagI	CCTNNNNNAGG	1 cut(s)	1192
XceI	RCATGY	1 cut(s)	178
XcmI	CCANNNNNNNNNTGG	3 cut(s)	323, 1052, 1110
XmiI	GTMKAC	2 cut(s)	770, 831
XspI	CTAG	3 cut(s)	473, 675, 954
Zsp2I	ATGCAT	1 cut(s)	1265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.