Prupe.4G211500_v2.0.a1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
13185982 .. 13188888
2907 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G211500.2

Sequence Viewer

Length: 1305 bp
ATGGACCCGAAGCCGATAATCACTTTCCTTCTCTTAATCTCGGCAACCGTCATCGCAGCCCAAGAATATGTCCGGCCTCCGCCTCGCAAAGCCCTCCATTTTCCATGGAGCCGAAAACCCTCTTCTCATCCCCAGCAGGTGCACATCTCTTTGGCAGGGGACAAGCACATGCGAGTGACTTGGATCACTTATGATAAATCTGCTCCGTCAATTGTTGAATATGGAACATCGTCAGGGAAGTACAGTTCTGTAGCTCAAGGAGAAAGTACCTCTTATAGTTATCTGCTCTATAGATCAGGAAAGATACACCATACTGTCATTGGGCCTCTCGAACATGGCACTGTTTACTTTTATCAATGTGGAGGACAAGATCCTGAGTTTCAGTTCAAGACCCCTCCAGCTCAATTTCCAATTACTTTTGCCGTGGCTGGAGATATGGGACAAACTGGATGGACAAAGTCAACCCTAGACCACATTGAACAGTGCAAATATGATTTGCATCTGCTTCCTGGAGATCTTTCATATGCTGATTACATGCAGTCCCGATGGGATACATTTGGTGAGCTGGTGCAGCCACTTGCAAGTGCAAGGCCATGGATGGTAACCCAAGGGAACCATGAAAAGGAGAATATACCATTGTTAAAAGATGGGTTTGCATCCTATAATTCCCGATGGAAAATGCCGTATGAAGAGAGCGGATCAAGTTCGAATCTTTACTATTCCTTTGAAGTTGCAGGTGTTCATGCTATCATGCTCGGTTCATATACTGATTATGATGAGTATTCAGATCAATACAGGTGGTTGAAGGCTGATCTTTCAAAGGTAGACCGTCAGAAGACACCTTGGCTGGTTGCGCTCTTTCATGTGCCCTGGTACAATAGTAACAAGGCTCATCAAGGTGAAGGGGACAGCATGATGGCAGCAATGGAGCCATTACTGTATGCTGCCAGTGTGGATATAGTGCTCGCTGGTCATGTTCATGCTTATGAACGCACGAAACGTGTGAACAGTGGAAAATCAGATACATGCGGCGCTGTCCACATAACCATTGGTGATGGAGGAAACAGAGAAGGTTTAGCTCACAAGTATATAAACCCATCTCCTGAGTGGTCAGTTTTCCGGGAAGCAAGTTTTGGTCATGGTGAGCTGAAGATAGTGAATTCGACCCATGCCTTTTGGACCTGGCATAGGAATGATGATGATGAGCCTGTAAGGTCTGATCAGGTCTGGATAACCTCGTTGGTCAGTTCTGGATGTGTTGCTGAGAAGAGACATGAACTAAGGAGTATACTTGTGGCACCATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

435

Amino Acids

48.93

Weight (kDa)

6.31

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 127, 725
Acc36I ACCTGC 2 cut(s) 127, 725
AccB1I GGYRCC 1 cut(s) 1297
AccBSI CCGCTC 1 cut(s) 696
AccI GTMKAC 2 cut(s) 825, 1288
AciI CCGC 3 cut(s) 80, 696, 1029
AclWI GGATC 3 cut(s) 191, 365, 706
AcsI RAATTY 1 cut(s) 1159
AcuI CTGAAG 1 cut(s) 1169
AfaI GTAC 3 cut(s) 242, 268, 875
AfiI CCNNNNNNNGG 2 cut(s) 622, 1188
AflIII ACRYGT 1 cut(s) 1000
AgsI TTSAA 6 cut(s) 218, 388, 479, 728, 805, 819
AjnI CCWGG 3 cut(s) 508, 869, 1181
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
AloI GAACNNNNNNTCC 2 cut(s) 229, 261
AluBI AGCT 5 cut(s) 254, 401, 565, 1079, 1147
AluI AGCT 5 cut(s) 254, 401, 565, 1079, 1147
Alw21I GWGCWC 2 cut(s) 144, 966
Alw26I GTCTC 1 cut(s) 1264
Alw44I GTGCAC 1 cut(s) 140
AlwI GGATC 3 cut(s) 191, 365, 706
AoxI GGCC 3 cut(s) 74, 323, 590
ApaLI GTGCAC 1 cut(s) 140
ApeKI GCWGC 4 cut(s) 56, 571, 920, 944
ApoI RAATTY 1 cut(s) 1159
AspLEI GCGC 2 cut(s) 856, 1034
AspS9I GGNCC 3 cut(s) 4, 323, 1179
AsuC2I CCSGG 1 cut(s) 1121
AsuHPI GGTGA 4 cut(s) 572, 911, 1064, 1154
AsuII TTCGAA 1 cut(s) 707
AvaII GGWCC 2 cut(s) 4, 1179
BaeGI GKGCMC 2 cut(s) 144, 870
BaeI ACNNNNGTAYC 2 cut(s) 865, 898
BanI GGYRCC 1 cut(s) 1297
BbsI GAAGAC 1 cut(s) 842
Bbv12I GWGCWC 2 cut(s) 144, 966
BbvI GCAGC 4 cut(s) 68, 583, 931, 932
BccI CCATC 8 cut(s) 444, 540, 592, 641, 666, 910, 1049, 1105
BceAI ACGGC 2 cut(s) 407, 667
BciT130I CCWGG 3 cut(s) 510, 871, 1183
BciVI GTATCC 1 cut(s) 544
BclI TGATCA 1 cut(s) 1219
BcnI CCSGG 1 cut(s) 1121
BcoDI GTCTC 1 cut(s) 1264
BfaI CTAG 1 cut(s) 467
BfmI CTRYAG 2 cut(s) 249, 289
BfoI RGCGCY 1 cut(s) 1035
BfuAI ACCTGC 2 cut(s) 127, 725
BfuI GTATCC 1 cut(s) 544
BglII AGATCT 1 cut(s) 514
BisI GCNGC 5 cut(s) 57, 572, 921, 945, 1030
BlsI GCNGC 5 cut(s) 58, 573, 922, 946, 1031
Bme1390I CCNGG 4 cut(s) 510, 871, 1121, 1183
Bme18I GGWCC 2 cut(s) 4, 1179
BmgT120I GGNCC 3 cut(s) 4, 323, 1179
BmiI GGNNCC 5 cut(s) 6, 110, 614, 930, 1299
BmrFI CCNGG 4 cut(s) 510, 871, 1121, 1183
BmsI GCATC 2 cut(s) 508, 665
BpiI GAAGAC 1 cut(s) 842
BpmI CTGGAG 3 cut(s) 381, 450, 531
Bpu14I TTCGAA 1 cut(s) 707
BpuEI CTTGAG 1 cut(s) 240
BpuMI CCSGG 1 cut(s) 1121
BsaBI GATNNNNATC 1 cut(s) 498
BsaJI CCNNGG 6 cut(s) 104, 423, 593, 607, 842, 869
Bsc4I CCNNNNNNNGG 2 cut(s) 622, 1188
Bse1I ACTGG 2 cut(s) 451, 948
Bse3DI GCAATG 1 cut(s) 930
Bse8I GATNNNNATC 1 cut(s) 498
BseBI CCWGG 3 cut(s) 510, 871, 1183
BseDI CCNNGG 6 cut(s) 104, 423, 593, 607, 842, 869
BseGI GGATG 5 cut(s) 127, 455, 603, 656, 1259
BseJI GATNNNNATC 1 cut(s) 498
BseLI CCNNNNNNNGG 2 cut(s) 622, 1188
BseMI GCAATG 1 cut(s) 930
BseMII CTCAG 3 cut(s) 366, 1095, 1254
BseNI ACTGG 2 cut(s) 451, 948
BseSI GKGCMC 2 cut(s) 144, 870
BseXI GCAGC 4 cut(s) 68, 583, 931, 932
BseYI CCCAGC 1 cut(s) 132
BsgI GTGCAG 1 cut(s) 590
BshFI GGCC 3 cut(s) 76, 325, 592
BshNI GGYRCC 1 cut(s) 1297
BsiHKAI GWGCWC 2 cut(s) 144, 966
BsiSI CCGG 2 cut(s) 73, 1120
BslFI GGGAC 4 cut(s) 173, 453, 526, 920
BslI CCNNNNNNNGG 2 cut(s) 622, 1188
BsmAI GTCTC 1 cut(s) 1264
BsmFI GGGAC 4 cut(s) 173, 453, 526, 920
BsnI GGCC 3 cut(s) 76, 325, 592
Bsp119I TTCGAA 1 cut(s) 707
Bsp1286I GDGCHC 3 cut(s) 144, 870, 966
Bsp143I GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
Bsp19I CCATGG 2 cut(s) 104, 593
BspACI CCGC 3 cut(s) 80, 696, 1029
BspANI GGCC 3 cut(s) 76, 325, 592
BspCNI CTCAG 3 cut(s) 367, 1096, 1255
BspLI GGNNCC 5 cut(s) 6, 110, 614, 930, 1299
BspMI ACCTGC 2 cut(s) 127, 725
BspPI GGATC 3 cut(s) 191, 365, 706
BspT104I TTCGAA 1 cut(s) 707
BspT107I GGYRCC 1 cut(s) 1297
BsrBI CCGCTC 1 cut(s) 696
BsrDI GCAATG 1 cut(s) 930
BsrI ACTGG 2 cut(s) 451, 948
BssECI CCNNGG 6 cut(s) 104, 423, 593, 607, 842, 869
BssMI GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
BssNAI GTATAC 1 cut(s) 1289
BssT1I CCWWGG 4 cut(s) 104, 593, 607, 842
Bst1107I GTATAC 1 cut(s) 1289
Bst2UI CCWGG 3 cut(s) 510, 871, 1183
Bst4CI ACNGT 8 cut(s) 49, 245, 316, 343, 483, 830, 939, 1010
Bst6I CTCTTC 3 cut(s) 127, 684, 1262
BstBI TTCGAA 1 cut(s) 707
BstC8I GCNNGC 1 cut(s) 966
BstDEI CTNAG 4 cut(s) 375, 1104, 1263, 1280
BstDSI CCRYGG 3 cut(s) 104, 423, 593
BstEII GGTNACC 1 cut(s) 601
BstENI CCTNNNNNAGG 1 cut(s) 1186
BstF5I GGATG 5 cut(s) 127, 455, 603, 656, 1259
BstH2I RGCGCY 1 cut(s) 1035
BstHHI GCGC 2 cut(s) 856, 1034
BstKTI GATC 8 cut(s) 186, 296, 373, 517, 701, 790, 814, 1222
BstMAI GTCTC 1 cut(s) 1264
BstMBI GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
BstMWI GCNNNNNNNGC 2 cut(s) 571, 853
BstNI CCWGG 3 cut(s) 510, 871, 1183
BstNSI RCATGY 3 cut(s) 172, 538, 1029
BstPI GGTNACC 1 cut(s) 601
BstSCI CCNGG 4 cut(s) 508, 869, 1119, 1181
BstSFI CTRYAG 2 cut(s) 249, 289
BstSLI GKGCMC 2 cut(s) 144, 870
BstV1I GCAGC 4 cut(s) 68, 583, 931, 932
BstV2I GAAGAC 1 cut(s) 842
BstX2I RGATCY 2 cut(s) 370, 514
BstYI RGATCY 2 cut(s) 370, 514
BstZ17I GTATAC 1 cut(s) 1289
BsuI GTATCC 1 cut(s) 544
BsuRI GGCC 3 cut(s) 76, 325, 592
BtgI CCRYGG 3 cut(s) 104, 423, 593
BtgZI GCGATG 1 cut(s) 37
BtsCI GGATG 5 cut(s) 127, 455, 603, 656, 1259
BtsIMutI CAGTG 4 cut(s) 339, 488, 955, 1015
BveI ACCTGC 2 cut(s) 127, 725
Cac8I GCNNGC 1 cut(s) 966
CfoI GCGC 2 cut(s) 856, 1034
Cfr13I GGNCC 3 cut(s) 4, 323, 1179
Csp6I GTAC 3 cut(s) 241, 267, 874
CspCI CAANNNNNGTGG 2 cut(s) 779, 814
CviQI GTAC 3 cut(s) 241, 267, 874
DdeI CTNAG 4 cut(s) 375, 1104, 1263, 1280
DpnI GATC 8 cut(s) 185, 295, 372, 516, 700, 789, 813, 1221
DpnII GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
Eam1104I CTCTTC 3 cut(s) 127, 684, 1262
EarI CTCTTC 3 cut(s) 127, 684, 1262
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 4 cut(s) 104, 593, 607, 842
Eco47I GGWCC 2 cut(s) 4, 1179
Eco57I CTGAAG 1 cut(s) 1169
Eco91I GGTNACC 1 cut(s) 601
EcoNI CCTNNNNNAGG 1 cut(s) 1186
EcoO65I GGTNACC 1 cut(s) 601
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 3 cut(s) 508, 869, 1181
EcoT14I CCWWGG 4 cut(s) 104, 593, 607, 842
ErhI CCWWGG 4 cut(s) 104, 593, 607, 842
FalI AAGNNNNNCTT 2 cut(s) 256, 288
FaqI GGGAC 4 cut(s) 173, 453, 526, 920
FauNDI CATATG 1 cut(s) 523
FbaI TGATCA 1 cut(s) 1219
FblI GTMKAC 2 cut(s) 825, 1288
Fnu4HI GCNGC 5 cut(s) 57, 572, 921, 945, 1030
FokI GGATG 5 cut(s) 114, 462, 610, 643, 1266
Fsp4HI GCNGC 5 cut(s) 57, 572, 921, 945, 1030
FspBI CTAG 1 cut(s) 467
GlaI GCGC 2 cut(s) 855, 1033
GluI GCNGC 5 cut(s) 57, 572, 921, 945, 1030
GsaI CCCAGC 1 cut(s) 136
GsuI CTGGAG 3 cut(s) 381, 450, 531
HaeII RGCGCY 1 cut(s) 1035
HaeIII GGCC 3 cut(s) 76, 325, 592
HapII CCGG 2 cut(s) 73, 1120
HhaI GCGC 2 cut(s) 856, 1034
Hin6I GCGC 2 cut(s) 854, 1032
HinP1I GCGC 2 cut(s) 854, 1032
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HinfI GANTC 1 cut(s) 709
HpaII CCGG 2 cut(s) 73, 1120
HphI GGTGA 4 cut(s) 572, 911, 1064, 1154
Hpy166II GTNNAC 7 cut(s) 142, 346, 462, 826, 1006, 1039, 1289
Hpy188I TCNGA 4 cut(s) 787, 834, 1021, 1219
Hpy188III TCNNGA 9 cut(s) 297, 329, 374, 388, 543, 669, 1103, 1228, 1251
Hpy8I GTNNAC 7 cut(s) 142, 346, 462, 826, 1006, 1039, 1289
HpyAV CCTTC 4 cut(s) 38, 799, 896, 1064
HpyCH4III ACNGT 8 cut(s) 49, 245, 316, 343, 483, 830, 939, 1010
HpyCH4IV ACGT 1 cut(s) 1000
HpyCH4V TGCA 9 cut(s) 142, 486, 499, 538, 571, 581, 587, 656, 734
HpyF10VI GCNNNNNNNGC 2 cut(s) 571, 853
HpyF3I CTNAG 4 cut(s) 375, 1104, 1263, 1280
HpySE526I ACGT 1 cut(s) 1000
HspAI GCGC 2 cut(s) 854, 1032
Ksp22I TGATCA 1 cut(s) 1219
Kzo9I GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
LmnI GCTCC 3 cut(s) 108, 208, 928
Lsp1109I GCAGC 4 cut(s) 68, 583, 931, 932
LweI GCATC 2 cut(s) 508, 665
MaeI CTAG 1 cut(s) 467
MaeII ACGT 1 cut(s) 1000
MaeIII GTNAC 3 cut(s) 175, 601, 881
MalI GATC 8 cut(s) 185, 295, 372, 516, 700, 789, 813, 1221
MbiI CCGCTC 1 cut(s) 696
MboI GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
MboII GAAGA 5 cut(s) 114, 701, 847, 1162, 1279
MfeI CAATTG 1 cut(s) 210
MflI RGATCY 2 cut(s) 370, 514
MhlI GDGCHC 3 cut(s) 144, 870, 966
MluCI AATT 5 cut(s) 210, 404, 411, 664, 1159
MseI TTAA 2 cut(s) 35, 641
MslI CAYNNNNRTG 5 cut(s) 173, 897, 978, 984, 1191
MspI CCGG 2 cut(s) 73, 1120
MspR9I CCNGG 4 cut(s) 510, 871, 1121, 1183
MunI CAATTG 1 cut(s) 210
MvaI CCWGG 3 cut(s) 510, 871, 1183
MwoI GCNNNNNNNGC 2 cut(s) 571, 853
NciI CCSGG 1 cut(s) 1121
NcoI CCATGG 2 cut(s) 104, 593
NdeI CATATG 1 cut(s) 523
NdeII GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
NlaIV GGNNCC 5 cut(s) 6, 110, 614, 930, 1299
NmeAIII GCCGAG 1 cut(s) 20
NmuCI GTSAC 1 cut(s) 175
NspI RCATGY 3 cut(s) 172, 538, 1029
NspV TTCGAA 1 cut(s) 707
PaqCI CACCTGC 2 cut(s) 127, 725
PcsI WCGNNNNNNNCGW 1 cut(s) 997
PfeI GAWTC 1 cut(s) 709
PflFI GACNNNGTC 1 cut(s) 457
PfoI TCCNGGA 2 cut(s) 508, 1119
PkrI GCNGC 5 cut(s) 58, 573, 922, 946, 1031
Psp6I CCWGG 3 cut(s) 508, 869, 1181
PspEI GGTNACC 1 cut(s) 601
PspFI CCCAGC 1 cut(s) 132
PspGI CCWGG 3 cut(s) 508, 869, 1181
PspN4I GGNNCC 5 cut(s) 6, 110, 614, 930, 1299
PspPI GGNCC 3 cut(s) 4, 323, 1179
PsuI RGATCY 2 cut(s) 370, 514
PsyI GACNNNGTC 1 cut(s) 457
RsaI GTAC 3 cut(s) 242, 268, 875
RsaNI GTAC 3 cut(s) 241, 267, 874
RseI CAYNNNNRTG 5 cut(s) 173, 897, 978, 984, 1191
SaqAI TTAA 2 cut(s) 35, 641
SatI GCNGC 5 cut(s) 57, 572, 921, 945, 1030
Sau3AI GATC 8 cut(s) 183, 293, 370, 514, 698, 787, 811, 1219
Sau96I GGNCC 3 cut(s) 4, 323, 1179
ScrFI CCNGG 4 cut(s) 510, 871, 1121, 1183
SduI GDGCHC 3 cut(s) 144, 870, 966
SfaNI GCATC 2 cut(s) 508, 665
SfcI CTRYAG 2 cut(s) 249, 289
SfuI TTCGAA 1 cut(s) 707
SinI GGWCC 2 cut(s) 4, 1179
SmiMI CAYNNNNRTG 5 cut(s) 173, 897, 978, 984, 1191
SmlI CTYRAG 1 cut(s) 255
SmoI CTYRAG 1 cut(s) 255
Sse9I AATT 5 cut(s) 210, 404, 411, 664, 1159
SsiI CCGC 3 cut(s) 80, 696, 1029
SspMI CTAG 1 cut(s) 467
StyD4I CCNGG 4 cut(s) 508, 869, 1119, 1181
StyI CCWWGG 4 cut(s) 104, 593, 607, 842
TaaI ACNGT 8 cut(s) 49, 245, 316, 343, 483, 830, 939, 1010
TaiI ACGT 1 cut(s) 1003
TaqI TCGA 3 cut(s) 330, 707, 1163
TasI AATT 5 cut(s) 210, 404, 411, 664, 1159
TatI WGTACW 1 cut(s) 240
TauI GCSGC 1 cut(s) 1032
TfiI GAWTC 1 cut(s) 709
Tru1I TTAA 2 cut(s) 35, 641
Tru9I TTAA 2 cut(s) 35, 641
TscAI CASTG 4 cut(s) 346, 488, 955, 1015
TseFI GTSAC 1 cut(s) 175
TseI GCWGC 4 cut(s) 56, 571, 920, 944
Tsp45I GTSAC 1 cut(s) 175
TspDTI ATGAA 9 cut(s) 510, 633, 702, 731, 750, 851, 968, 1002, 1290
TspGWI ACGGA 1 cut(s) 195
TspRI CASTG 4 cut(s) 346, 488, 955, 1015
Tth111I GACNNNGTC 1 cut(s) 457
VneI GTGCAC 1 cut(s) 140
VpaK11BI GGWCC 2 cut(s) 4, 1179
XagI CCTNNNNNAGG 1 cut(s) 1186
XapI RAATTY 1 cut(s) 1159
XceI RCATGY 3 cut(s) 172, 538, 1029
XcmI CCANNNNNNNNNTGG 3 cut(s) 317, 1046, 1104
XmiI GTMKAC 2 cut(s) 825, 1288
XspI CTAG 1 cut(s) 467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.