Rh5CG301800

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0005127
Physical Location & Seq
Reverse (-)
33171994 .. 33173563
1570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG301800.1

Sequence Viewer

Length: 693 bp
ATGGAATCGAAGCTCTTTTTGTTGTTAATCACGGTGGGCTTCACAGTCATCGCAGGCGAGTATGTCCGGCCTCAGCGTCGCAAAGACCTTCAATTCCCATGGGACGCAAAACCCTCTTCCCAACCCCAACAGGTGCACATCTCTTTGGCAGGAGACAAGCACATGCAAGTGACGTGGGTCACTGGTGATAGATCTGCTCCTTCAATTGTTGAATATGGAACATCATCGGGGAAATACAGCTCCGTAGCTCAAGGAGAAAGCACTTCGTATAGTTATATGATCTATAAGTCTGGACTGATACACCACACTGTCATTGGTCCTCTTGAACATGATACAGTTTACTTCTACAAATGTGGAGGACAAGGTCCTGAGTTTCAGCTCAAGACCCCTGCAGCTCAGTTTCCAATTACTTTTGTTGTGGCAGGAGATCTTGGTCAAACTGGATGGACAAAGTCAACCCTAGACCACATCGAGCGCTGCAAGTATGATGTGCATCTCGTTCCTGGAGACCTTTCATATGCTGATTATTTGCAGCTTCGGTGGGATACCTTTGGTGAGCTGGTTCAGCCACTCGCAAGTGCAAGGCCATGGATGGTAACCCAGGGAAACCATGAGAAGGAGAGCATACCATTCTTGAAGGATGGGTTTGAATCCTATAATTCTAGGTGGAAAATGCCGTATAAAGAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

230

Amino Acids

26.01

Weight (kDa)

6.44

Isoelectric Point (pI)

49.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 42 - 129 8.2e-21 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 137 - 225 4.6e-07 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 476
AfiI CCNNNNNNNGG 1 cut(s) 616
AgsI TTSAA 6 cut(s) 92, 204, 212, 326, 637, 650
AjiI CACGTC 1 cut(s) 174
AjnI CCWGG 2 cut(s) 502, 600
AluBI AGCT 7 cut(s) 13, 240, 248, 379, 395, 535, 559
AluI AGCT 7 cut(s) 13, 240, 248, 379, 395, 535, 559
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 2 cut(s) 147, 501
Alw44I GTGCAC 1 cut(s) 134
Aor51HI AGCGCT 1 cut(s) 476
AoxI GGCC 2 cut(s) 68, 584
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 3 cut(s) 392, 477, 532
AspLEI GCGC 1 cut(s) 477
AspS9I GGNCC 2 cut(s) 317, 365
AsuHPI GGTGA 2 cut(s) 197, 566
AvaII GGWCC 2 cut(s) 317, 365
BaeGI GKGCMC 1 cut(s) 138
Bbv12I GWGCWC 1 cut(s) 138
BbvCI CCTCAGC 1 cut(s) 72
BbvI GCAGC 3 cut(s) 404, 464, 544
BccI CCATC 3 cut(s) 438, 586, 635
BceAI ACGGC 1 cut(s) 661
BciT130I CCWGG 2 cut(s) 504, 602
BciVI GTATCC 1 cut(s) 538
BcoDI GTCTC 2 cut(s) 147, 501
BfaI CTAG 2 cut(s) 461, 663
BfmI CTRYAG 1 cut(s) 390
BfoI RGCGCY 1 cut(s) 478
BfuI GTATCC 1 cut(s) 538
BglII AGATCT 2 cut(s) 191, 427
BisI GCNGC 3 cut(s) 393, 478, 533
BlsI GCNGC 3 cut(s) 394, 479, 534
Bme1390I CCNGG 2 cut(s) 504, 602
Bme18I GGWCC 2 cut(s) 317, 365
BmgBI CACGTC 1 cut(s) 174
BmgT120I GGNCC 2 cut(s) 317, 365
BmrFI CCNGG 2 cut(s) 504, 602
BmsI GCATC 1 cut(s) 502
BoxI GACNNNNGTC 1 cut(s) 176
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 72
BpuEI CTTGAG 2 cut(s) 234, 365
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 1 cut(s) 501
BsaJI CCNNGG 4 cut(s) 98, 587, 600, 601
Bsc4I CCNNNNNNNGG 1 cut(s) 616
Bse1I ACTGG 2 cut(s) 187, 445
Bse8I GATNNNNATC 1 cut(s) 492
BseBI CCWGG 2 cut(s) 504, 602
BseDI CCNNGG 4 cut(s) 98, 587, 600, 601
BseGI GGATG 3 cut(s) 449, 597, 646
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 1 cut(s) 616
BseMII CTCAG 3 cut(s) 86, 360, 410
BseNI ACTGG 2 cut(s) 187, 445
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 3 cut(s) 404, 464, 544
BshFI GGCC 2 cut(s) 70, 586
BsiHKAI GWGCWC 1 cut(s) 138
BsiSI CCGG 1 cut(s) 67
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 616
BsmAI GTCTC 2 cut(s) 147, 501
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 2 cut(s) 70, 586
Bso31I GGTCTC 1 cut(s) 501
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 3 cut(s) 191, 279, 427
Bsp19I CCATGG 2 cut(s) 98, 587
BspANI GGCC 2 cut(s) 70, 586
BspCNI CTCAG 3 cut(s) 85, 361, 409
BspMAI CTGCAG 1 cut(s) 394
BspTNI GGTCTC 1 cut(s) 501
BsrI ACTGG 2 cut(s) 187, 445
BssECI CCNNGG 4 cut(s) 98, 587, 600, 601
BssMI GATC 3 cut(s) 191, 279, 427
BssT1I CCWWGG 2 cut(s) 98, 587
Bst2UI CCWGG 2 cut(s) 504, 602
Bst4CI ACNGT 4 cut(s) 34, 46, 310, 337
Bst6I CTCTTC 1 cut(s) 121
BstC8I GCNNGC 1 cut(s) 55
BstDEI CTNAG 3 cut(s) 72, 369, 396
BstDSI CCRYGG 2 cut(s) 98, 587
BstEII GGTNACC 1 cut(s) 595
BstF5I GGATG 3 cut(s) 449, 597, 646
BstH2I RGCGCY 1 cut(s) 478
BstHHI GCGC 1 cut(s) 477
BstKTI GATC 3 cut(s) 194, 282, 430
BstMAI GTCTC 2 cut(s) 147, 501
BstMBI GATC 3 cut(s) 191, 279, 427
BstMWI GCNNNNNNNGC 1 cut(s) 565
BstNI CCWGG 2 cut(s) 504, 602
BstNSI RCATGY 1 cut(s) 166
BstPAI GACNNNNGTC 1 cut(s) 176
BstPI GGTNACC 1 cut(s) 595
BstSCI CCNGG 2 cut(s) 502, 600
BstSFI CTRYAG 1 cut(s) 390
BstSLI GKGCMC 1 cut(s) 138
BstV1I GCAGC 3 cut(s) 404, 464, 544
BstX2I RGATCY 2 cut(s) 191, 427
BstYI RGATCY 2 cut(s) 191, 427
BsuI GTATCC 1 cut(s) 538
BsuRI GGCC 2 cut(s) 70, 586
BtgI CCRYGG 2 cut(s) 98, 587
BtgZI GCGATG 1 cut(s) 34
BtrI CACGTC 1 cut(s) 174
BtsCI GGATG 3 cut(s) 449, 597, 646
BtsIMutI CAGTG 2 cut(s) 180, 306
Cac8I GCNNGC 1 cut(s) 55
CfoI GCGC 1 cut(s) 477
Cfr13I GGNCC 2 cut(s) 317, 365
CseI GACGC 2 cut(s) 65, 113
CspCI CAANNNNNGTGG 2 cut(s) 155, 190
CviAII CATG 5 cut(s) 99, 163, 329, 588, 611
DdeI CTNAG 3 cut(s) 72, 369, 396
DpnI GATC 3 cut(s) 193, 281, 429
DpnII GATC 3 cut(s) 191, 279, 427
Eam1104I CTCTTC 1 cut(s) 121
EarI CTCTTC 1 cut(s) 121
Eco130I CCWWGG 2 cut(s) 98, 587
Eco31I GGTCTC 1 cut(s) 501
Eco47I GGWCC 2 cut(s) 317, 365
Eco47III AGCGCT 1 cut(s) 476
Eco91I GGTNACC 1 cut(s) 595
EcoO109I RGGNCCY 1 cut(s) 365
EcoO65I GGTNACC 1 cut(s) 595
EcoRII CCWGG 2 cut(s) 502, 600
EcoT14I CCWWGG 2 cut(s) 98, 587
ErhI CCWWGG 2 cut(s) 98, 587
FaeI CATG 5 cut(s) 102, 166, 332, 591, 614
FaqI GGGAC 1 cut(s) 116
FatI CATG 5 cut(s) 98, 162, 328, 587, 610
FauNDI CATATG 1 cut(s) 517
Fnu4HI GCNGC 3 cut(s) 393, 478, 533
FokI GGATG 3 cut(s) 456, 604, 653
Fsp4HI GCNGC 3 cut(s) 393, 478, 533
FspBI CTAG 2 cut(s) 461, 663
GlaI GCGC 1 cut(s) 476
GluI GCNGC 3 cut(s) 393, 478, 533
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 1 cut(s) 478
HaeIII GGCC 2 cut(s) 70, 586
HapII CCGG 1 cut(s) 67
HgaI GACGC 2 cut(s) 65, 113
HhaI GCGC 1 cut(s) 477
Hin1II CATG 5 cut(s) 102, 166, 332, 591, 614
Hin6I GCGC 1 cut(s) 475
HinP1I GCGC 1 cut(s) 475
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HinfI GANTC 2 cut(s) 5, 650
HpaII CCGG 1 cut(s) 67
HphI GGTGA 2 cut(s) 197, 566
Hpy166II GTNNAC 3 cut(s) 136, 340, 456
Hpy188III TCNNGA 5 cut(s) 291, 323, 368, 382, 634
Hpy8I GTNNAC 3 cut(s) 136, 340, 456
Hpy99I CGWCG 1 cut(s) 81
HpyAV CCTTC 4 cut(s) 98, 210, 610, 631
HpyCH4III ACNGT 4 cut(s) 34, 46, 310, 337
HpyCH4IV ACGT 1 cut(s) 173
HpyCH4V TGCA 7 cut(s) 136, 166, 392, 480, 493, 532, 581
HpyF10VI GCNNNNNNNGC 1 cut(s) 565
HpyF3I CTNAG 3 cut(s) 72, 369, 396
HpySE526I ACGT 1 cut(s) 173
Hsp92II CATG 5 cut(s) 102, 166, 332, 591, 614
HspAI GCGC 1 cut(s) 475
Kzo9I GATC 3 cut(s) 191, 279, 427
LmnI GCTCC 2 cut(s) 202, 245
Lsp1109I GCAGC 3 cut(s) 404, 464, 544
LweI GCATC 1 cut(s) 502
MaeI CTAG 2 cut(s) 461, 663
MaeII ACGT 1 cut(s) 173
MaeIII GTNAC 3 cut(s) 169, 178, 595
MalI GATC 3 cut(s) 193, 281, 429
MboI GATC 3 cut(s) 191, 279, 427
MboII GAAGA 1 cut(s) 108
MfeI CAATTG 1 cut(s) 204
MflI RGATCY 2 cut(s) 191, 427
MhlI GDGCHC 1 cut(s) 138
MluCI AATT 4 cut(s) 92, 204, 405, 658
MnlI CCTC 4 cut(s) 81, 124, 330, 350
MseI TTAA 1 cut(s) 26
MslI CAYNNNNRTG 1 cut(s) 167
MspI CCGG 1 cut(s) 67
MspR9I CCNGG 2 cut(s) 504, 602
MunI CAATTG 1 cut(s) 204
MvaI CCWGG 2 cut(s) 504, 602
MwoI GCNNNNNNNGC 1 cut(s) 565
NcoI CCATGG 2 cut(s) 98, 587
NdeI CATATG 1 cut(s) 517
NdeII GATC 3 cut(s) 191, 279, 427
NlaIII CATG 5 cut(s) 102, 166, 332, 591, 614
NmuCI GTSAC 2 cut(s) 169, 178
NspI RCATGY 1 cut(s) 166
PasI CCCWGGG 1 cut(s) 601
PfeI GAWTC 2 cut(s) 5, 650
PflFI GACNNNGTC 2 cut(s) 363, 451
PfoI TCCNGGA 1 cut(s) 502
PkrI GCNGC 3 cut(s) 394, 479, 534
PpuMI RGGWCCY 1 cut(s) 365
PshAI GACNNNNGTC 1 cut(s) 176
Psp5II RGGWCCY 1 cut(s) 365
Psp6I CCWGG 2 cut(s) 502, 600
PspEI GGTNACC 1 cut(s) 595
PspGI CCWGG 2 cut(s) 502, 600
PspPI GGNCC 2 cut(s) 317, 365
PspPPI RGGWCCY 1 cut(s) 365
PstI CTGCAG 1 cut(s) 394
PsuI RGATCY 2 cut(s) 191, 427
PsyI GACNNNGTC 2 cut(s) 363, 451
RseI CAYNNNNRTG 1 cut(s) 167
SaqAI TTAA 1 cut(s) 26
SatI GCNGC 3 cut(s) 393, 478, 533
Sau3AI GATC 3 cut(s) 191, 279, 427
Sau96I GGNCC 2 cut(s) 317, 365
ScrFI CCNGG 2 cut(s) 504, 602
SduI GDGCHC 1 cut(s) 138
SfaNI GCATC 1 cut(s) 502
SfcI CTRYAG 1 cut(s) 390
SinI GGWCC 2 cut(s) 317, 365
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 249, 380
SmoI CTYRAG 2 cut(s) 249, 380
Sse9I AATT 4 cut(s) 92, 204, 405, 658
SspMI CTAG 2 cut(s) 461, 663
StyD4I CCNGG 2 cut(s) 502, 600
StyI CCWWGG 2 cut(s) 98, 587
TaaI ACNGT 4 cut(s) 34, 46, 310, 337
TaiI ACGT 1 cut(s) 176
TaqI TCGA 2 cut(s) 8, 471
TasI AATT 4 cut(s) 92, 204, 405, 658
TfiI GAWTC 2 cut(s) 5, 650
Tru1I TTAA 1 cut(s) 26
Tru9I TTAA 1 cut(s) 26
TscAI CASTG 2 cut(s) 187, 313
TseFI GTSAC 2 cut(s) 169, 178
TseI GCWGC 3 cut(s) 392, 477, 532
Tsp45I GTSAC 2 cut(s) 169, 178
TspDTI ATGAA 1 cut(s) 504
TspGWI ACGGA 1 cut(s) 232
TspRI CASTG 2 cut(s) 187, 313
Tth111I GACNNNGTC 2 cut(s) 363, 451
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 2 cut(s) 317, 365
XceI RCATGY 1 cut(s) 166
XcmI CCANNNNNNNNNTGG 1 cut(s) 311
XspI CTAG 2 cut(s) 461, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.