Plant protein of unknown function (DUF641)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58960 AT5G58960 AT5G58960 |
| fragaria_vesca | FvH4_3g37820 FvH4_3g37850 |
| malus_domestica | MD03G1078100.v1.1 MD11G1082800.v1.1 |
| prunus_persica | Prupe.6G063100_v2.0.a1 |
| pyrus_communis | pycom03g06240 pycom11g07090 |
| rosa_chinensis | RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071 |
| rosa_laevigata | RLG00000035951 RLG00000035952 |
| rosa_multiflora | Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034 |
| rosa_roxburghii | Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290 |
| rosa_rugosa | Rorug05G0387200 Rorug05G0387600 Rorug05G0388100 |
| rosa_samantha | Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300 |
| rosa_wichuraiana | Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 236 |
| AatII | GACGTC | 1 cut(s) | 1140 |
| Acc36I | ACCTGC | 1 cut(s) | 982 |
| AccB1I | GGYRCC | 2 cut(s) | 619, 1366 |
| AccII | CGCG | 1 cut(s) | 256 |
| AclWI | GGATC | 5 cut(s) | 104, 131, 144, 154, 345 |
| AcoI | YGGCCR | 1 cut(s) | 1203 |
| AcsI | RAATTY | 2 cut(s) | 98, 274 |
| AcuI | CTGAAG | 1 cut(s) | 301 |
| AcyI | GRCGYC | 2 cut(s) | 620, 1137 |
| AfaI | GTAC | 3 cut(s) | 569, 906, 989 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 334, 475, 829 |
| AgsI | TTSAA | 5 cut(s) | 45, 104, 130, 683, 1495 |
| AjnI | CCWGG | 3 cut(s) | 84, 1486, 1533 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1220, 1252 |
| Alw21I | GWGCWC | 1 cut(s) | 1399 |
| Alw26I | GTCTC | 5 cut(s) | 174, 557, 750, 1236, 1543 |
| AlwI | GGATC | 5 cut(s) | 104, 131, 144, 154, 345 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 85 |
| Ama87I | CYCGRG | 1 cut(s) | 1499 |
| AoxI | GGCC | 1 cut(s) | 1203 |
| ApeKI | GCWGC | 7 cut(s) | 591, 632, 878, 899, 1059, 1252, 1333 |
| ApoI | RAATTY | 2 cut(s) | 98, 274 |
| AspLEI | GCGC | 2 cut(s) | 256, 622 |
| AspS9I | GGNCC | 2 cut(s) | 177, 493 |
| AsuC2I | CCSGG | 3 cut(s) | 1364, 1440, 1458 |
| AvaI | CYCGRG | 1 cut(s) | 1499 |
| AvaII | GGWCC | 2 cut(s) | 177, 493 |
| BalI | TGGCCA | 1 cut(s) | 1205 |
| BamHI | GGATCC | 1 cut(s) | 136 |
| BanI | GGYRCC | 2 cut(s) | 619, 1366 |
| BanII | GRGCYC | 1 cut(s) | 1399 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 443, 475 |
| BauI | CACGAG | 1 cut(s) | 1037 |
| Bbv12I | GWGCWC | 1 cut(s) | 1399 |
| BbvCI | CCTCAGC | 3 cut(s) | 329, 506, 647 |
| BbvI | GCAGC | 7 cut(s) | 603, 644, 865, 886, 1071, 1264, 1320 |
| BccI | CCATC | 3 cut(s) | 302, 601, 1216 |
| BceAI | ACGGC | 2 cut(s) | 604, 1072 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1120, 1154 |
| BciT130I | CCWGG | 3 cut(s) | 86, 1488, 1535 |
| BcnI | CCSGG | 3 cut(s) | 1364, 1440, 1458 |
| BcoDI | GTCTC | 5 cut(s) | 174, 557, 750, 1236, 1543 |
| BfaI | CTAG | 7 cut(s) | 35, 374, 666, 753, 824, 1386, 1542 |
| BfmI | CTRYAG | 1 cut(s) | 912 |
| BfoI | RGCGCY | 1 cut(s) | 623 |
| BfuAI | ACCTGC | 1 cut(s) | 982 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 251 |
| Bme1390I | CCNGG | 6 cut(s) | 86, 1364, 1440, 1458, 1488, 1535 |
| Bme18I | GGWCC | 2 cut(s) | 177, 493 |
| BmeT110I | CYCGRG | 1 cut(s) | 1499 |
| BmgT120I | GGNCC | 2 cut(s) | 177, 493 |
| BmiI | GGNNCC | 7 cut(s) | 138, 269, 494, 495, 621, 1368, 1452 |
| BmrFI | CCNGG | 6 cut(s) | 86, 1364, 1440, 1458, 1488, 1535 |
| BmrI | ACTGGG | 1 cut(s) | 3 |
| BmsI | GCATC | 2 cut(s) | 845, 1071 |
| BmuI | ACTGGG | 1 cut(s) | 3 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1438, 1470 |
| BpmI | CTGGAG | 2 cut(s) | 774, 1545 |
| Bpu10I | CCTNAGC | 4 cut(s) | 329, 506, 647, 1320 |
| BpuEI | CTTGAG | 3 cut(s) | 196, 592, 1016 |
| BpuMI | CCSGG | 3 cut(s) | 1364, 1440, 1458 |
| BsaAI | YACGTR | 1 cut(s) | 463 |
| BsaBI | GATNNNNATC | 1 cut(s) | 413 |
| BsaHI | GRCGYC | 2 cut(s) | 620, 1137 |
| BsaI | GGTCTC | 2 cut(s) | 750, 1543 |
| BsaJI | CCNNGG | 4 cut(s) | 488, 1024, 1283, 1486 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 568, 598, 1217, 1220, 1247, 1250 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 334, 475, 829 |
| Bse1I | ACTGG | 3 cut(s) | 9, 116, 776 |
| Bse3DI | GCAATG | 2 cut(s) | 453, 822 |
| Bse8I | GATNNNNATC | 1 cut(s) | 413 |
| BseBI | CCWGG | 3 cut(s) | 86, 1488, 1535 |
| BseDI | CCNNGG | 4 cut(s) | 488, 1024, 1283, 1486 |
| BseGI | GGATG | 2 cut(s) | 313, 1213 |
| BseJI | GATNNNNATC | 1 cut(s) | 413 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 334, 475, 829 |
| BseMI | GCAATG | 2 cut(s) | 453, 822 |
| BseMII | CTCAG | 6 cut(s) | 343, 489, 497, 530, 638, 1334 |
| BseNI | ACTGG | 3 cut(s) | 9, 116, 776 |
| BseXI | GCAGC | 7 cut(s) | 603, 644, 865, 886, 1071, 1264, 1320 |
| BsgI | GTGCAG | 1 cut(s) | 266 |
| Bsh1236I | CGCG | 1 cut(s) | 256 |
| Bsh1285I | CGRYCG | 1 cut(s) | 73 |
| BshFI | GGCC | 1 cut(s) | 1205 |
| BshNI | GGYRCC | 2 cut(s) | 619, 1366 |
| BsiEI | CGRYCG | 1 cut(s) | 73 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1399 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1499 |
| BsiSI | CCGG | 4 cut(s) | 246, 1364, 1439, 1458 |
| BslFI | GGGAC | 2 cut(s) | 506, 902 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 334, 475, 829 |
| BsmAI | GTCTC | 5 cut(s) | 174, 557, 750, 1236, 1543 |
| BsmBI | CGTCTC | 1 cut(s) | 557 |
| BsmFI | GGGAC | 2 cut(s) | 506, 902 |
| BsnI | GGCC | 1 cut(s) | 1205 |
| Bso31I | GGTCTC | 2 cut(s) | 750, 1543 |
| BsoBI | CYCGRG | 1 cut(s) | 1499 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1399 |
| Bsp143I | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| BspANI | GGCC | 1 cut(s) | 1205 |
| BspCNI | CTCAG | 6 cut(s) | 342, 490, 498, 531, 639, 1333 |
| BspFNI | CGCG | 1 cut(s) | 256 |
| BspHI | TCATGA | 2 cut(s) | 322, 417 |
| BspLI | GGNNCC | 7 cut(s) | 138, 269, 494, 495, 621, 1368, 1452 |
| BspMI | ACCTGC | 1 cut(s) | 982 |
| BspPI | GGATC | 5 cut(s) | 104, 131, 144, 154, 345 |
| BspQI | GCTCTTC | 2 cut(s) | 298, 1121 |
| BspT107I | GGYRCC | 2 cut(s) | 619, 1366 |
| BspTNI | GGTCTC | 2 cut(s) | 750, 1543 |
| BsrDI | GCAATG | 2 cut(s) | 453, 822 |
| BsrI | ACTGG | 3 cut(s) | 9, 116, 776 |
| BssECI | CCNNGG | 4 cut(s) | 488, 1024, 1283, 1486 |
| BssMI | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| BssNI | GRCGYC | 2 cut(s) | 620, 1137 |
| BssSI | CACGAG | 1 cut(s) | 1037 |
| BssT1I | CCWWGG | 2 cut(s) | 1024, 1283 |
| Bst2BI | CACGAG | 1 cut(s) | 1037 |
| Bst2UI | CCWGG | 3 cut(s) | 86, 1488, 1535 |
| Bst6I | CTCTTC | 4 cut(s) | 298, 351, 1072, 1121 |
| BstACI | GRCGYC | 2 cut(s) | 620, 1137 |
| BstBAI | YACGTR | 1 cut(s) | 463 |
| BstC8I | GCNNGC | 3 cut(s) | 258, 876, 1347 |
| BstDEI | CTNAG | 7 cut(s) | 329, 498, 506, 539, 647, 1246, 1320 |
| BstDSI | CCRYGG | 1 cut(s) | 488 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 473 |
| BstF5I | GGATG | 2 cut(s) | 313, 1213 |
| BstFNI | CGCG | 1 cut(s) | 256 |
| BstH2I | RGCGCY | 1 cut(s) | 623 |
| BstHHI | GCGC | 2 cut(s) | 256, 622 |
| BstKTI | GATC | 6 cut(s) | 79, 112, 139, 149, 340, 741 |
| BstMAI | GTCTC | 5 cut(s) | 174, 557, 750, 1236, 1543 |
| BstMBI | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| BstMCI | CGRYCG | 1 cut(s) | 73 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 251, 521, 544, 714, 989, 1342 |
| BstNI | CCWGG | 3 cut(s) | 86, 1488, 1535 |
| BstNSI | RCATGY | 1 cut(s) | 874 |
| BstSCI | CCNGG | 6 cut(s) | 84, 1362, 1438, 1456, 1486, 1533 |
| BstSFI | CTRYAG | 1 cut(s) | 912 |
| BstUI | CGCG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 7 cut(s) | 603, 644, 865, 886, 1071, 1264, 1320 |
| BstX2I | RGATCY | 1 cut(s) | 136 |
| BstYI | RGATCY | 1 cut(s) | 136 |
| BsuRI | GGCC | 1 cut(s) | 1205 |
| BtgI | CCRYGG | 1 cut(s) | 488 |
| BtgZI | GCGATG | 2 cut(s) | 877, 1076 |
| BtsCI | GGATG | 2 cut(s) | 313, 1213 |
| BtsIMutI | CAGTG | 1 cut(s) | 783 |
| BveI | ACCTGC | 1 cut(s) | 982 |
| Cac8I | GCNNGC | 3 cut(s) | 258, 876, 1347 |
| CaiI | CAGNNNCTG | 1 cut(s) | 85 |
| CciI | TCATGA | 2 cut(s) | 322, 417 |
| CfoI | GCGC | 2 cut(s) | 256, 622 |
| Cfr13I | GGNCC | 2 cut(s) | 177, 493 |
| CseI | GACGC | 1 cut(s) | 706 |
| CsiI | ACCWGGT | 1 cut(s) | 1533 |
| Csp6I | GTAC | 3 cut(s) | 568, 905, 988 |
| CviQI | GTAC | 3 cut(s) | 568, 905, 988 |
| DdeI | CTNAG | 7 cut(s) | 329, 498, 506, 539, 647, 1246, 1320 |
| DinI | GGCGCC | 1 cut(s) | 621 |
| DpnI | GATC | 6 cut(s) | 78, 111, 138, 148, 339, 740 |
| DpnII | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| EaeI | YGGCCR | 1 cut(s) | 1203 |
| Eam1104I | CTCTTC | 4 cut(s) | 298, 351, 1072, 1121 |
| EarI | CTCTTC | 4 cut(s) | 298, 351, 1072, 1121 |
| Ecl136II | GAGCTC | 1 cut(s) | 1397 |
| Eco130I | CCWWGG | 2 cut(s) | 1024, 1283 |
| Eco24I | GRGCYC | 1 cut(s) | 1399 |
| Eco31I | GGTCTC | 2 cut(s) | 750, 1543 |
| Eco32I | GATATC | 1 cut(s) | 1156 |
| Eco47I | GGWCC | 2 cut(s) | 177, 493 |
| Eco53kI | GAGCTC | 1 cut(s) | 1397 |
| Eco57I | CTGAAG | 1 cut(s) | 301 |
| Eco88I | CYCGRG | 1 cut(s) | 1499 |
| EcoICRI | GAGCTC | 1 cut(s) | 1397 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 473 |
| EcoO109I | RGGNCCY | 1 cut(s) | 493 |
| EcoRII | CCWGG | 3 cut(s) | 84, 1486, 1533 |
| EcoRV | GATATC | 1 cut(s) | 1156 |
| EcoT14I | CCWWGG | 2 cut(s) | 1024, 1283 |
| EcoT38I | GRGCYC | 1 cut(s) | 1399 |
| EgeI | GGCGCC | 1 cut(s) | 621 |
| EheI | GGCGCC | 1 cut(s) | 621 |
| ErhI | CCWWGG | 2 cut(s) | 1024, 1283 |
| Esp3I | CGTCTC | 1 cut(s) | 557 |
| FaqI | GGGAC | 2 cut(s) | 506, 902 |
| FauI | CCCGC | 3 cut(s) | 249, 867, 1436 |
| FokI | GGATG | 2 cut(s) | 320, 1200 |
| FriOI | GRGCYC | 1 cut(s) | 1399 |
| FspBI | CTAG | 7 cut(s) | 35, 374, 666, 753, 824, 1386, 1542 |
| GlaI | GCGC | 2 cut(s) | 255, 621 |
| GsuI | CTGGAG | 2 cut(s) | 774, 1545 |
| HaeII | RGCGCY | 1 cut(s) | 623 |
| HaeIII | GGCC | 1 cut(s) | 1205 |
| HapII | CCGG | 4 cut(s) | 246, 1364, 1439, 1458 |
| HgaI | GACGC | 1 cut(s) | 706 |
| HhaI | GCGC | 2 cut(s) | 256, 622 |
| Hin1I | GRCGYC | 2 cut(s) | 620, 1137 |
| Hin6I | GCGC | 2 cut(s) | 254, 620 |
| HinP1I | GCGC | 2 cut(s) | 254, 620 |
| HindIII | AAGCTT | 1 cut(s) | 545 |
| HinfI | GANTC | 4 cut(s) | 785, 998, 1229, 1288 |
| HpaII | CCGG | 4 cut(s) | 246, 1364, 1439, 1458 |
| Hpy166II | GTNNAC | 1 cut(s) | 1531 |
| Hpy188I | TCNGA | 7 cut(s) | 81, 146, 181, 301, 350, 1241, 1464 |
| Hpy8I | GTNNAC | 1 cut(s) | 1531 |
| Hpy99I | CGWCG | 3 cut(s) | 1142, 1145, 1260 |
| HpyAV | CCTTC | 9 cut(s) | 51, 243, 258, 573, 750, 754, 856, 1265, 1360 |
| HpyCH4IV | ACGT | 4 cut(s) | 462, 566, 907, 1137 |
| HpyCH4V | TGCA | 3 cut(s) | 283, 771, 815 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 251, 521, 544, 714, 989, 1342 |
| HpyF3I | CTNAG | 7 cut(s) | 329, 498, 506, 539, 647, 1246, 1320 |
| HpySE526I | ACGT | 4 cut(s) | 462, 566, 907, 1137 |
| Hsp92I | GRCGYC | 2 cut(s) | 620, 1137 |
| HspAI | GCGC | 2 cut(s) | 254, 620 |
| KasI | GGCGCC | 1 cut(s) | 619 |
| KflI | GGGWCCC | 1 cut(s) | 493 |
| Kzo9I | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| LguI | GCTCTTC | 2 cut(s) | 298, 1121 |
| LmnI | GCTCC | 3 cut(s) | 643, 1193, 1394 |
| Lsp1109I | GCAGC | 7 cut(s) | 603, 644, 865, 886, 1071, 1264, 1320 |
| LweI | GCATC | 2 cut(s) | 845, 1071 |
| MabI | ACCWGGT | 1 cut(s) | 1533 |
| MaeI | CTAG | 7 cut(s) | 35, 374, 666, 753, 824, 1386, 1542 |
| MaeII | ACGT | 4 cut(s) | 462, 566, 907, 1137 |
| MaeIII | GTNAC | 2 cut(s) | 584, 1169 |
| MalI | GATC | 6 cut(s) | 78, 111, 138, 148, 339, 740 |
| MboI | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| MflI | RGATCY | 1 cut(s) | 136 |
| MhlI | GDGCHC | 1 cut(s) | 1399 |
| MlsI | TGGCCA | 1 cut(s) | 1205 |
| MluCI | AATT | 6 cut(s) | 98, 193, 274, 800, 1400, 1546 |
| MluNI | TGGCCA | 1 cut(s) | 1205 |
| Mly113I | GGCGCC | 1 cut(s) | 620 |
| MlyI | GAGTC | 3 cut(s) | 1007, 1238, 1297 |
| MmeI | TCCRAC | 3 cut(s) | 324, 328, 1215 |
| Mox20I | TGGCCA | 1 cut(s) | 1205 |
| MscI | TGGCCA | 1 cut(s) | 1205 |
| MseI | TTAA | 1 cut(s) | 1481 |
| MslI | CAYNNNNRTG | 1 cut(s) | 524 |
| Msp20I | TGGCCA | 1 cut(s) | 1205 |
| MspA1I | CMGCKG | 3 cut(s) | 594, 635, 899 |
| MspI | CCGG | 4 cut(s) | 246, 1364, 1439, 1458 |
| MspR9I | CCNGG | 6 cut(s) | 86, 1364, 1440, 1458, 1488, 1535 |
| MvaI | CCWGG | 3 cut(s) | 86, 1488, 1535 |
| MvnI | CGCG | 1 cut(s) | 256 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 251, 521, 544, 714, 989, 1342 |
| NarI | GGCGCC | 1 cut(s) | 620 |
| NciI | CCSGG | 3 cut(s) | 1364, 1440, 1458 |
| NdeII | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| NlaIV | GGNNCC | 7 cut(s) | 138, 269, 494, 495, 621, 1368, 1452 |
| NspI | RCATGY | 1 cut(s) | 874 |
| PagI | TCATGA | 2 cut(s) | 322, 417 |
| PciSI | GCTCTTC | 2 cut(s) | 298, 1121 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 594, 1149 |
| PfeI | GAWTC | 1 cut(s) | 785 |
| PflFI | GACNNNGTC | 1 cut(s) | 1139 |
| PleI | GAGTC | 3 cut(s) | 1006, 1237, 1296 |
| PluTI | GGCGCC | 1 cut(s) | 623 |
| PpsI | GAGTC | 3 cut(s) | 1006, 1237, 1296 |
| Ppu21I | YACGTR | 1 cut(s) | 463 |
| PpuMI | RGGWCCY | 1 cut(s) | 493 |
| PsiI | TTATAA | 1 cut(s) | 236 |
| Psp124BI | GAGCTC | 1 cut(s) | 1399 |
| Psp5II | RGGWCCY | 1 cut(s) | 493 |
| Psp6I | CCWGG | 3 cut(s) | 84, 1486, 1533 |
| PspGI | CCWGG | 3 cut(s) | 84, 1486, 1533 |
| PspN4I | GGNNCC | 7 cut(s) | 138, 269, 494, 495, 621, 1368, 1452 |
| PspPI | GGNCC | 2 cut(s) | 177, 493 |
| PspPPI | RGGWCCY | 1 cut(s) | 493 |
| PstNI | CAGNNNCTG | 1 cut(s) | 85 |
| PsuI | RGATCY | 1 cut(s) | 136 |
| PsyI | GACNNNGTC | 1 cut(s) | 1139 |
| RsaI | GTAC | 3 cut(s) | 569, 906, 989 |
| RsaNI | GTAC | 3 cut(s) | 568, 905, 988 |
| RseI | CAYNNNNRTG | 1 cut(s) | 524 |
| SacI | GAGCTC | 1 cut(s) | 1399 |
| SapI | GCTCTTC | 2 cut(s) | 298, 1121 |
| SaqAI | TTAA | 1 cut(s) | 1481 |
| Sau3AI | GATC | 6 cut(s) | 76, 109, 136, 146, 337, 738 |
| Sau96I | GGNCC | 2 cut(s) | 177, 493 |
| SchI | GAGTC | 3 cut(s) | 1007, 1238, 1297 |
| ScrFI | CCNGG | 6 cut(s) | 86, 1364, 1440, 1458, 1488, 1535 |
| SduI | GDGCHC | 1 cut(s) | 1399 |
| SexAI | ACCWGGT | 1 cut(s) | 1533 |
| SfaNI | GCATC | 2 cut(s) | 845, 1071 |
| SfcI | CTRYAG | 1 cut(s) | 912 |
| SfoI | GGCGCC | 1 cut(s) | 621 |
| SinI | GGWCC | 2 cut(s) | 177, 493 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 524 |
| SmlI | CTYRAG | 3 cut(s) | 211, 571, 995 |
| SmoI | CTYRAG | 3 cut(s) | 211, 571, 995 |
| Sse9I | AATT | 6 cut(s) | 98, 193, 274, 800, 1400, 1546 |
| SspDI | GGCGCC | 1 cut(s) | 619 |
| SspMI | CTAG | 7 cut(s) | 35, 374, 666, 753, 824, 1386, 1542 |
| SstI | GAGCTC | 1 cut(s) | 1399 |
| StyD4I | CCNGG | 6 cut(s) | 84, 1362, 1438, 1456, 1486, 1533 |
| StyI | CCWWGG | 2 cut(s) | 1024, 1283 |
| TaiI | ACGT | 4 cut(s) | 465, 569, 910, 1140 |
| TaqI | TCGA | 5 cut(s) | 108, 432, 1032, 1143, 1152 |
| TaqII | GACCGA | 1 cut(s) | 87 |
| TasI | AATT | 6 cut(s) | 98, 193, 274, 800, 1400, 1546 |
| TauI | GCSGC | 4 cut(s) | 515, 597, 899, 923 |
| TfiI | GAWTC | 1 cut(s) | 785 |
| Tru1I | TTAA | 1 cut(s) | 1481 |
| Tru9I | TTAA | 1 cut(s) | 1481 |
| TscAI | CASTG | 1 cut(s) | 783 |
| TseI | GCWGC | 7 cut(s) | 591, 632, 878, 899, 1059, 1252, 1333 |
| TspDTI | ATGAA | 7 cut(s) | 434, 438, 464, 833, 1039, 1139, 1202 |
| TspGWI | ACGGA | 4 cut(s) | 129, 477, 946, 1273 |
| TspRI | CASTG | 1 cut(s) | 783 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1139 |
| VpaK11BI | GGWCC | 2 cut(s) | 177, 493 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 473 |
| XapI | RAATTY | 2 cut(s) | 98, 274 |
| XbaI | TCTAGA | 2 cut(s) | 34, 752 |
| XceI | RCATGY | 1 cut(s) | 874 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1198 |
| XspI | CTAG | 7 cut(s) | 35, 374, 666, 753, 824, 1386, 1542 |
| ZraI | GACGTC | 1 cut(s) | 1138 |